Message boards : ATLAS application : Guide for building everything from sources to run native ATLAS on Debian 9 (Stretch) Version 2
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bronco

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Message 37574 - Posted: 8 Dec 2018, 22:14:38 UTC - in response to Message 37522.  

Sorry for the late reply.

~$ cvmfs_config probe
Probing /cvmfs/atlas.cern.ch... OK
Probing /cvmfs/atlas-condb.cern.ch... OK
Probing /cvmfs/grid.cern.ch... OK

~$ singularity --debug exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/images/singularity/x86_64-slc6.img hostname
VERBOSE [U=0,P=3895] print() Set messagelevel to: 5
DEBUG [U=0,P=3895] init() PIPE_EXEC_FD value: 7
VERBOSE [U=0,P=3895] init() Container runtime
VERBOSE [U=0,P=3895] is_suid() Check if we are running as setuid
DEBUG [U=0,P=3895] init() Overlay seems supported by kernel
DEBUG [U=0,P=3895] init() Drop privileges
DEBUG [U=1000,P=3895] init() Read json configuration from pipe
DEBUG [U=1000,P=3895] init() Set child signal mask
DEBUG [U=1000,P=3895] init() Create socketpair for smaster communication channel
DEBUG [U=1000,P=3895] init() Wait C and JSON runtime configuration from scontainer stage 1
DEBUG [U=1000,P=3906] set_parent_death_signal() Set parent death signal to 9
VERBOSE [U=1000,P=3906] init() Spawn scontainer stage 1
VERBOSE [U=1000,P=3906] priv_escalate() Get root privileges
DEBUG [U=0,P=3906] set_parent_death_signal() Set parent death signal to 9
DEBUG [U=0,P=3906] prepare_scontainer_stage() Entering in scontainer stage 1
DEBUG [U=1000,P=3906] set_parent_death_signal() Set parent death signal to 9
VERBOSE [U=1000,P=3906] startup() Execute scontainer stage 1
DEBUG [U=1000,P=3906] Stage() Entering scontainer stage 1
DEBUG [U=1000,P=3906] prepareFd() Open file descriptor for /cvmfs
DEBUG [U=1000,P=3906] Init() Entering image format intializer
DEBUG [U=1000,P=3906] Init() Check for image format sif
DEBUG [U=1000,P=3906] Init() Opening /cvmfs/atlas.cern.ch/repo/images/singularity/x86_64-slc6.img in read-only mode: no write permissions
DEBUG [U=1000,P=3906] Init() sif format initializer returns: SIF magic not found
DEBUG [U=1000,P=3906] Init() Check for image format sandbox
DEBUG [U=1000,P=3906] Init() sandbox format initializer returns: not a directory image
DEBUG [U=1000,P=3906] Init() Check for image format squashfs
DEBUG [U=1000,P=3906] Init() squashfs format initializer returns: not a valid squashfs image
DEBUG [U=1000,P=3906] Init() Check for image format ext3
DEBUG [U=1000,P=3895] init() Receiving configuration from scontainer stage 1
DEBUG [U=1000,P=3895] init() Wait completion of scontainer stage1
VERBOSE [U=1000,P=3895] priv_escalate() Get root privileges
VERBOSE [U=0,P=3895] create_namespace() Create mount namespace
DEBUG [U=0,P=3895] init() Create RPC socketpair for communication between scontainer and RPC server
DEBUG [U=0,P=3895] init() Pass terminal control to child
VERBOSE [U=0,P=3895] init() Spawn smaster process
DEBUG [U=0,P=3998] set_parent_death_signal() Set parent death signal to 9
VERBOSE [U=0,P=3998] init() Spawn scontainer stage 2
VERBOSE [U=0,P=3998] create_namespace() Create mount namespace
VERBOSE [U=0,P=3999] init() Spawn RPC server
VERBOSE [U=0,P=3999] startup() Serve RPC requests
VERBOSE [U=1000,P=3895] startup() Execute smaster process
DEBUG [U=1000,P=3895] setupSessionLayout() Attempting to use overlayfs (enable overlay = try)
DEBUG [U=1000,P=3895] setupOverlayLayout() Creating overlay SESSIONDIR layout
DEBUG [U=1000,P=3895] addRootfsMount() Mount rootfs in read-only mode
DEBUG [U=1000,P=3895] addRootfsMount() Mounting block [ext3] image: /cvmfs/atlas.cern.ch/repo/images/singularity/x86_64-slc6.img
DEBUG [U=1000,P=3895] addKernelMount() Checking configuration file for 'mount proc'
DEBUG [U=1000,P=3895] addKernelMount() Adding proc to mount list
DEBUG [U=1000,P=3895] addKernelMount() Checking configuration file for 'mount sys'
DEBUG [U=1000,P=3895] addKernelMount() Adding sysfs to mount list
DEBUG [U=1000,P=3895] addDevMount() Checking configuration file for 'mount dev'
DEBUG [U=1000,P=3895] addDevMount() Adding dev to mount list
DEBUG [U=1000,P=3895] addHostMount() Not mounting host file systems per configuration
VERBOSE [U=1000,P=3895] addBindsMount() Found 'bind path' = /etc/localtime, /etc/localtime
VERBOSE [U=1000,P=3895] addBindsMount() Found 'bind path' = /etc/hosts, /etc/hosts
DEBUG [U=1000,P=3895] addHomeStagingDir() Staging home directory (/home/brad) at /usr/local/var/singularity/mnt/session/home/brad
DEBUG [U=1000,P=3895] addHomeMount() Adding home directory mount [/usr/local/var/singularity/mnt/session/home/brad:/home/brad] to list using layer: overlay
DEBUG [U=1000,P=3895] isLayerEnabled() Using Layer system: overlay
DEBUG [U=1000,P=3895] addUserbindsMount() Adding /cvmfs to mount list
DEBUG [U=1000,P=3895] addUserbindsMount() Checking for 'user bind control' in configuration file
DEBUG [U=1000,P=3895] addTmpMount() Checking for 'mount tmp' in configuration file
DEBUG [U=1000,P=3895] addScratchMount() Not mounting scratch directory: Not requested
DEBUG [U=1000,P=3895] addLibsMount() Checking for 'user bind control' in configuration file
DEBUG [U=1000,P=3895] addResolvConfMount() Adding /etc/resolv.conf to mount list
DEBUG [U=1000,P=3895] addHostnameMount() Skipping hostname mount, not virtualizing UTS namespace on user request
DEBUG [U=1000,P=3895] create() Mount all
DEBUG [U=1000,P=3895] mountGeneric() Mounting tmpfs to /usr/local/var/singularity/mnt/session
DEBUG [U=1000,P=3895] mountImage() Mounting loop device /dev/loop4 to /usr/local/var/singularity/mnt/session/rootfs
DEBUG [U=1000,P=3895] addActionsMount() Ignoring actions mount, /usr/local/var/singularity/mnt/session/rootfs/.singularity.d/actions doesn't exist
DEBUG [U=1000,P=3895] mountGeneric() Mounting overlay to /usr/local/var/singularity/mnt/session/final
DEBUG [U=1000,P=3895] setSlaveMount() Set RPC mount propagation flag to SLAVE
VERBOSE [U=1000,P=3895] Passwd() Checking for template passwd file: /usr/local/var/singularity/mnt/session/rootfs/etc/passwd
VERBOSE [U=1000,P=3895] Passwd() Creating passwd content
VERBOSE [U=1000,P=3895] Passwd() Creating template passwd file and appending user data: /usr/local/var/singularity/mnt/session/rootfs/etc/passwd
DEBUG [U=1000,P=3895] addIdentityMount() Adding /etc/passwd to mount list
VERBOSE [U=1000,P=3895] Group() Checking for template group file: /usr/local/var/singularity/mnt/session/rootfs/etc/group
VERBOSE [U=1000,P=3895] Group() Creating group content
DEBUG [U=1000,P=3895] addIdentityMount() Adding /etc/group to mount list
DEBUG [U=1000,P=3895] mountGeneric() Mounting /dev to /usr/local/var/singularity/mnt/session/final/dev
DEBUG [U=1000,P=3895] mountGeneric() Mounting /etc/localtime to /usr/local/var/singularity/mnt/session/final/etc/localtime
DEBUG [U=1000,P=3895] mountGeneric() Mounting /etc/hosts to /usr/local/var/singularity/mnt/session/final/etc/hosts
DEBUG [U=1000,P=3895] mountGeneric() Mounting /proc to /usr/local/var/singularity/mnt/session/final/proc
DEBUG [U=1000,P=3895] mountGeneric() Remounting /usr/local/var/singularity/mnt/session/final/proc
DEBUG [U=1000,P=3895] mountGeneric() Mounting sysfs to /usr/local/var/singularity/mnt/session/final/sys
DEBUG [U=1000,P=3895] mountGeneric() Mounting /home/brad to /usr/local/var/singularity/mnt/session/home/brad
DEBUG [U=1000,P=3895] mountGeneric() Remounting /usr/local/var/singularity/mnt/session/home/brad
DEBUG [U=1000,P=3895] mountGeneric() Mounting /usr/local/var/singularity/mnt/session/home/brad to /usr/local/var/singularity/mnt/session/final/home/brad
DEBUG [U=1000,P=3895] mountGeneric() Remounting /usr/local/var/singularity/mnt/session/final/home/brad
DEBUG [U=1000,P=3895] mountGeneric() Mounting /cvmfs to /usr/local/var/singularity/mnt/session/final/cvmfs
DEBUG [U=1000,P=3895] mountGeneric() Remounting /usr/local/var/singularity/mnt/session/final/cvmfs
DEBUG [U=1000,P=3895] mountGeneric() Mounting /tmp to /usr/local/var/singularity/mnt/session/final/tmp
DEBUG [U=1000,P=3895] mountGeneric() Remounting /usr/local/var/singularity/mnt/session/final/tmp
DEBUG [U=1000,P=3895] mountGeneric() Mounting /var/tmp to /usr/local/var/singularity/mnt/session/final/var/tmp
DEBUG [U=1000,P=3895] mountGeneric() Remounting /usr/local/var/singularity/mnt/session/final/var/tmp
DEBUG [U=1000,P=3895] mountGeneric() Skipping mount /usr/local/var/singularity/mnt/session/final/home/brad, /usr/local/var/singularity/mnt/session/final/home/brad already mounted
DEBUG [U=1000,P=3895] mountGeneric() Mounting /usr/local/var/singularity/mnt/session/etc/resolv.conf to /usr/local/var/singularity/mnt/session/final/etc/resolv.conf
DEBUG [U=1000,P=3895] mountGeneric() Mounting /usr/local/var/singularity/mnt/session/etc/passwd to /usr/local/var/singularity/mnt/session/final/etc/passwd
DEBUG [U=1000,P=3895] mountGeneric() Mounting /usr/local/var/singularity/mnt/session/etc/group to /usr/local/var/singularity/mnt/session/final/etc/group
DEBUG [U=1000,P=3895] create() Chroot into /usr/local/var/singularity/mnt/session/final
DEBUG [U=0,P=3999] Chroot() Change current directory to /usr/local/var/singularity/mnt/session/final
DEBUG [U=0,P=3999] Chroot() Hold reference to host / directory
DEBUG [U=0,P=3999] Chroot() Called pivot_root on /usr/local/var/singularity/mnt/session/final
DEBUG [U=0,P=3999] Chroot() Change current directory to host / directory
DEBUG [U=0,P=3999] Chroot() Apply slave mount propagation for host / directory
DEBUG [U=0,P=3999] Chroot() Called unmount(/, syscall.MNT_DETACH)
DEBUG [U=0,P=3999] Chroot() Changing directory to / to avoid getpwd issues
DEBUG [U=1000,P=3895] create() Chdir into / to avoid errors
DEBUG [U=0,P=3998] set_parent_death_signal() Set parent death signal to 9
DEBUG [U=0,P=3998] prepare_scontainer_stage() Entering in scontainer stage 2
DEBUG [U=1000,P=3998] set_parent_death_signal() Set parent death signal to 9
VERBOSE [U=1000,P=3998] startup() Execute scontainer stage 2
DEBUG [U=1000,P=3895] PostStartProcess() Post start process
opti7010
DEBUG [U=1000,P=3895] CleanupContainer() Cleanup container
DEBUG [U=1000,P=3895] Master() Child exited with exit status 0
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gyllic

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Message 37579 - Posted: 9 Dec 2018, 22:36:36 UTC - in response to Message 37574.  
Last modified: 9 Dec 2018, 22:40:11 UTC

Thanks!

Hm, thats weird, since at a first glance I don't see anything why native ATLAS should not run on your Lubuntu machine.
Accroding to the "return 3" error code that is given by the ATLAS run script (see here https://lhcathome.cern.ch/lhcathome/result.php?resultid=211183308), it could not run the command "singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/images/singularity/x86_64-slc6.img hostname" or the command did not produce a valid output. But according to your posted debug log, this command produces an output: your hostname "opti7010"
Also, the "singularity --debug" command shows basically the same as from a machine that has already successfully crunched native ATLAS tasks.

I don't know why it is not working. Just a few guesses (might have nothing to do with the problem at all): maybe some user rights/privilege problems? Did you install singularity with "sudo make install"?

Maybe just try another native task?
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bronco

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Message 37588 - Posted: 10 Dec 2018, 18:32:17 UTC - in response to Message 37579.  

I rebooted and tried 2 more tasks but they both failed for the same reason.
I am pretty sure I installed with "sudo make install" but maybe not.
It could be a permissions problem. As far as I can tell it installs only 2 files: singularity (the binary) and singularity.conf. The binary is set for execution by root, group and all. Singularity.conf is readable by root, group and all so user boinc (who owns boinc) should have no problem executing it and reading the config file. Perhaps it's attempting to write a disk file in a directory in which it does not have write permission?
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gyllic

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Message 37591 - Posted: 11 Dec 2018, 10:20:58 UTC - in response to Message 37588.  

What is the output of the command (remember to probe cvmfs first):
sudo -H -u boinc singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/images/singularity/x86_64-slc6.img hostname
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bronco

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Message 37592 - Posted: 12 Dec 2018, 1:58:55 UTC - in response to Message 37591.  
Last modified: 12 Dec 2018, 2:02:15 UTC

It outputs the hostname. So it's not a permissions problem.
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Message 38071 - Posted: 27 Feb 2019, 17:29:09 UTC

Presumably it does not make sense to run the native ATLAS app if I need to do it on a Windows machine by using Ubuntu in a virtualbox?

Thanks!
Regards,
Bob P.
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computezrmle
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Message 38074 - Posted: 27 Feb 2019, 20:24:08 UTC - in response to Message 38071.  

Presumably it does not make sense to run the native ATLAS app if I need to do it on a Windows machine by using Ubuntu in a virtualbox?

Thanks!

This computer has enough resources to try it out:
https://lhcathome.cern.ch/lhcathome/show_host_detail.php?hostid=10449689

As you are already running ATLAS vbox on it using a 3-core configuration I would suggest to set up a 3-core VM with the same RAM settings you configured for your ATLAS VMs.
Let it run for a while and compare the runtime/CPU time values.
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bronco

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Message 38076 - Posted: 27 Feb 2019, 20:40:41 UTC - in response to Message 38071.  

Presumably it does not make sense to run the native ATLAS app if I need to do it on a Windows machine by using Ubuntu in a virtualbox?

Thanks!


Depends on how many ATLAS tasks one intends to run concurrent and #cpus per task? If the intention is to run only 1 single core task then there seems to be little difference in RAM and HD overhead.

If the intention is to run 5 single core tasks concurrently, for example, then you eliminate the overhead of 4 VMs.
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Henry Nebrensky

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Message 38079 - Posted: 28 Feb 2019, 9:57:25 UTC - in response to Message 38071.  
Last modified: 28 Feb 2019, 9:58:20 UTC

Presumably it does not make sense to run the native ATLAS app if I need to do it on a Windows machine by using Ubuntu in a virtualbox?


If you're willing to build yourself a custom VM to then run BOINC and hence Atlas-native inside it, I think it would make more sense to build an SL6 VM and then you can just install the dependencies (CVMFS and a couple of Atlas bits) from RPMs, rather than trying to build them yourself (on Ubuntu).
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Guy PFLIEGER Mase HR

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Message 39945 - Posted: 17 Sep 2019, 10:25:12 UTC - in response to Message 38079.  

I need an efficient installer of the add on

Thank you very much!
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Guy PFLIEGER Mase HR

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Message 39952 - Posted: 17 Sep 2019, 14:54:53 UTC - in response to Message 39945.  

<core_client_version>7.14.2</core_client_version>
<![CDATA[
<stderr_txt>
2019-09-13 00:18:58 (9456): vboxwrapper (7.7.26196): starting
2019-09-13 00:19:03 (9456): Feature: Checkpoint interval offset (566 seconds)
2019-09-13 00:19:03 (9456): Detected: VirtualBox VboxManage Interface (Version: 6.0.12)
2019-09-13 00:19:03 (9456): Detected: Minimum checkpoint interval (900.000000 seconds)
2019-09-13 00:19:03 (9456): Successfully copied 'init_data.xml' to the shared directory.
2019-09-13 00:19:04 (9456): Create VM. (boinc_2b9db68030cef809, slot#0)
2019-09-13 00:19:05 (9456): Setting Memory Size for VM. (10200MB)
2019-09-13 00:19:05 (9456): Setting CPU Count for VM. (8)
2019-09-13 00:19:06 (9456): Setting Chipset Options for VM.
2019-09-13 00:19:06 (9456): Setting Boot Options for VM.
2019-09-13 00:19:06 (9456): Setting Network Configuration for NAT.
2019-09-13 00:19:07 (9456): Enabling VM Network Access.
2019-09-13 00:19:07 (9456): Disabling USB Support for VM.
2019-09-13 00:19:07 (9456): Disabling COM Port Support for VM.
2019-09-13 00:19:07 (9456): Disabling LPT Port Support for VM.
2019-09-13 00:19:08 (9456): Disabling Audio Support for VM.
2019-09-13 00:19:08 (9456): Disabling Clipboard Support for VM.
2019-09-13 00:19:08 (9456): Disabling Drag and Drop Support for VM.
2019-09-13 00:19:08 (9456): Adding storage controller(s) to VM.
2019-09-13 00:19:09 (9456): Adding virtual disk drive to VM. (vm_image.vdi)
2019-09-13 00:19:09 (9456): Adding VirtualBox Guest Additions to VM.
2019-09-13 00:19:09 (9456): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2019-09-13 00:19:10 (9456): forwarding host port 49839 to guest port 80
2019-09-13 00:19:10 (9456): Enabling remote desktop for VM.
2019-09-13 00:19:10 (9456): Enabling shared directory for VM.
2019-09-13 00:19:11 (9456): Starting VM. (boinc_2b9db68030cef809, slot#0)
2019-09-13 00:19:25 (9456): Successfully started VM. (PID = '2916')
2019-09-13 00:19:25 (9456): Reporting VM Process ID to BOINC.
2019-09-13 00:19:35 (9456): Guest Log: BIOS: VirtualBox 6.0.12
2019-09-13 00:19:35 (9456): Guest Log: CPUID EDX: 0x178bfbff
2019-09-13 00:19:35 (9456): Guest Log: BIOS: ata0-0: PCHS=16383/16/63 LCHS=1024/255/63
2019-09-13 00:19:35 (9456): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2019-09-13 00:19:35 (9456): Guest Log: BIOS: Booting from Hard Disk...
2019-09-13 00:19:35 (9456): Guest Log: BIOS: KBD: unsupported int 16h function 03
2019-09-13 00:19:35 (9456): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000
2019-09-13 00:19:36 (9456): VM state change detected. (old = 'poweroff', new = 'running')
2019-09-13 00:19:46 (9456): Detected: Web Application Enabled (http://localhost:49839)
2019-09-13 00:19:46 (9456): Detected: Remote Desktop Enabled (localhost:49840)
2019-09-13 00:19:57 (9456): Guest Log: vboxguest: major 0, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2019-09-13 00:19:57 (9456): Preference change detected
2019-09-13 00:19:57 (9456): Setting CPU throttle for VM. (60%)
2019-09-13 00:19:57 (9456): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2019-09-13 00:20:08 (9456): Guest Log: VBoxGuest: VBoxGuestCommonGuestCapsAcquire: pSession(0xffff8802898e3210), OR(0x0), NOT(0xffffffff), flags(0x0)
2019-09-13 00:20:08 (9456): Guest Log: VBoxGuest: VBoxGuestCommonGuestCapsAcquire: pSession(0xffff8802873b2010), OR(0x0), NOT(0xffffffff), flags(0x0)
2019-09-13 00:20:08 (9456): Guest Log: VBoxGuest: VBoxGuestCommonGuestCapsAcquire: pSession(0xffff88028a815610), OR(0x0), NOT(0xffffffff), flags(0x0)
2019-09-13 00:20:08 (9456): Guest Log: VBoxGuest: VBoxGuestCommonGuestCapsAcquire: pSession(0xffff880287059a10), OR(0x0), NOT(0xffffffff), flags(0x0)
2019-09-13 00:21:21 (9456): Guest Log: Copying input files into RunAtlas.
2019-09-13 00:21:21 (9456): Guest Log: Copied input files into RunAtlas.
2019-09-13 00:21:53 (9456): Guest Log: copied the webapp to /var/www
2019-09-13 00:21:53 (9456): Guest Log: This vm does not need to setup http proxy
2019-09-13 00:21:53 (9456): Guest Log: ATHENA_PROC_NUMBER=8
2019-09-13 00:22:04 (9456): Guest Log: Starting ATLAS job. (PandaID=4477264435 taskID=19000492)
2019-09-13 02:00:05 (9456): Status Report: Elapsed Time: '6008.385262'
2019-09-13 02:00:05 (9456): Status Report: CPU Time: '23718.000000'
2019-09-13 03:40:11 (9456): Status Report: Elapsed Time: '12014.841354'
2019-09-13 03:40:11 (9456): Status Report: CPU Time: '52096.562500'
2019-09-13 05:20:18 (9456): Status Report: Elapsed Time: '18021.617313'
2019-09-13 05:20:18 (9456): Status Report: CPU Time: '80437.484375'
2019-09-13 07:00:25 (9456): Status Report: Elapsed Time: '24028.210190'
2019-09-13 07:00:25 (9456): Status Report: CPU Time: '108787.062500'
2019-09-13 08:40:31 (9456): Status Report: Elapsed Time: '30034.802490'
2019-09-13 08:40:31 (9456): Status Report: CPU Time: '137108.390625'
2019-09-13 10:20:38 (9456): Status Report: Elapsed Time: '36041.188437'
2019-09-13 10:20:38 (9456): Status Report: CPU Time: '165491.453125'
2019-09-13 12:00:44 (9456): Status Report: Elapsed Time: '42047.371960'
2019-09-13 12:00:44 (9456): Status Report: CPU Time: '192785.359375'
2019-09-13 12:17:55 (9456): Guest Log: The last 10 lines of the pilot log.
2019-09-13 12:17:55 (9456): Guest Log: -rw------- 1 atlas01 atlas01 760 Aug 22 11:01 setup.py
2019-09-13 12:17:55 (9456): Guest Log: -rw------- 1 atlas01 atlas01 221 Jul 25 16:38 TODO.md
2019-09-13 12:17:55 (9456): Guest Log: -rw------- 1 atlas01 atlas01 11 Sep 13 00:23 /home/atlas01/RunAtlas/pilot2/pandaIDs.out
2019-09-13 12:17:55 (9456): Guest Log: 4477264435
2019-09-13 12:17:55 (9456): Guest Log: 2019-09-13 10:17:45 UTC [wrapper] Test setup, not cleaning
2019-09-13 12:17:55 (9456): Guest Log: 2019-09-13 10:17:45 UTC [wrapper] ==== wrapper stdout END ====
2019-09-13 12:17:55 (9456): Guest Log: 2019-09-13 10:17:45 UTC [wrapper] ==== wrapper stderr END ====
2019-09-13 12:17:55 (9456): Guest Log: 2019-09-13 10:17:46 UTC [wrapper] wrapper wrapperexiting ec=0, duration=42952
2019-09-13 12:17:55 (9456): Guest Log: 2019-09-13 10:17:46 UTC [wrapper] apfmon messages muted
2019-09-13 12:17:55 (9456): Guest Log: Listing of results directory
2019-09-13 12:17:55 (9456): Guest Log: total 524712
2019-09-13 12:17:55 (9456): Guest Log: -rw-r--r-- 1 atlas01 atlas01 259319 Sep 12 06:33 pilot2.tar.gz
2019-09-13 12:17:55 (9456): Guest Log: -rw-r--r-- 1 atlas01 atlas01 4480 Sep 12 07:15 queuedata.json
2019-09-13 12:17:55 (9456): Guest Log: -rwx------ 1 atlas01 atlas01 12641 Sep 12 07:19 runpilot2-wrapper.sh
2019-09-13 12:17:55 (9456): Guest Log: -rw------- 1 atlas01 atlas01 2841 Sep 12 07:19 pandaJobData.out
2019-09-13 12:17:55 (9456): Guest Log: -rwxr-xr-x 1 atlas01 atlas01 262118199 Sep 13 00:21 EVNT.18605549._000094.pool.root.1
2019-09-13 12:17:55 (9456): Guest Log: -rwxr-xr-x 1 atlas01 atlas01 8638 Sep 13 00:21 init_data.xml
2019-09-13 12:17:55 (9456): Guest Log: -rwxr-xr-x 1 atlas01 atlas01 267478 Sep 13 00:21 input.tar.gz
2019-09-13 12:17:55 (9456): Guest Log: -rwxr-xr-x 1 atlas01 atlas01 812 Sep 13 00:21 RTE.tar.gz
2019-09-13 12:17:55 (9456): Guest Log: -rwxr-xr-x 1 atlas01 atlas01 14022 Sep 13 00:21 start_atlas.sh
2019-09-13 12:17:55 (9456): Guest Log: drwxr-xr-x 3 atlas01 atlas01 4096 Sep 13 00:21 APPS
2019-09-13 12:17:55 (9456): Guest Log: -rw------- 1 atlas01 atlas01 4068496 Sep 13 00:22 agis_schedconf.cvmfs.json
2019-09-13 12:17:55 (9456): Guest Log: -rw------- 1 atlas01 atlas01 7568336 Sep 13 00:23 agis_ddmendpoints.json
2019-09-13 12:17:55 (9456): Guest Log: drwx------ 3 atlas01 atlas01 4096 Sep 13 00:23 pilot2
2019-09-13 12:17:55 (9456): Guest Log: -rw------- 1 atlas01 atlas01 255111545 Sep 13 12:14 HITS.19000492._010872.pool.root.1
2019-09-13 12:17:55 (9456): Guest Log: -rw------- 1 atlas01 atlas01 1286835 Sep 13 12:16 log.19000492._010872.job.log.tgz.1
2019-09-13 12:17:55 (9456): Guest Log: -rw------- 1 atlas01 atlas01 77997 Sep 13 12:17 heartbeat.json
2019-09-13 12:17:55 (9456): Guest Log: -rw------- 1 atlas01 atlas01 10159 Sep 13 12:17 pilotlog.txt
2019-09-13 12:17:55 (9456): Guest Log: -rw------- 1 atlas01 atlas01 1676552 Sep 13 12:17 log.19000492._010872.job.log.1
2019-09-13 12:17:55 (9456): Guest Log: -rw------- 1 atlas01 atlas01 463 Sep 13 12:17 output.list
2019-09-13 12:17:55 (9456): Guest Log: -rw-r--r-- 1 atlas01 atlas01 692 Sep 13 12:17 runtime_log
2019-09-13 12:17:55 (9456): Guest Log: -rw------- 1 atlas01 atlas01 4730880 Sep 13 12:17 result.tar.gz
2019-09-13 12:17:55 (9456): Guest Log: -rw-r--r-- 1 atlas01 atlas01 6893 Sep 13 12:17 runtime_log.err
2019-09-13 12:17:55 (9456): Guest Log: -rw------- 1 atlas01 atlas01 536 Sep 13 12:17 GA3KDmegWSvn9Rq4apoT9bVoABFKDmABFKDms75TDmABFKDmXgPIrn.diag
2019-09-13 12:17:55 (9456): Guest Log: HITS file was successfully produced
2019-09-13 12:17:55 (9456): Guest Log: -rw------- 1 atlas01 atlas01 255111545 Sep 13 12:14 /home/atlas01/RunAtlas/HITS.19000492._010872.pool.root.1
2019-09-13 12:17:55 (9456): Guest Log: Successfully finished the ATLAS job!
2019-09-13 12:17:55 (9456): Guest Log: Copying the results back to the shared directory!
2019-09-13 12:17:55 (9456): Guest Log: Copied the result file back to the shared directory and created atlas_done file!
2019-09-13 12:17:55 (9456): Guest Log: Success! Shutting down the machine.
2019-09-13 12:17:55 (9456): VM Completion File Detected.
2019-09-13 12:17:55 (9456): Powering off VM.
2019-09-13 12:17:57 (9456): Successfully stopped VM.
2019-09-13 12:17:57 (9456): Deregistering VM. (boinc_2b9db68030cef809, slot#0)
2019-09-13 12:17:57 (9456): Removing network bandwidth throttle group from VM.
2019-09-13 12:17:57 (9456): Removing storage controller(s) from VM.
2019-09-13 12:17:58 (9456): Removing VM from VirtualBox.
2019-09-13 12:17:58 (9456): Removing virtual disk drive from VirtualBox.
12:18:03 (9456): called boinc_finish(0)

</stderr_txt>
]]>

This was the only task that run correct until end
245710806
123557839
10611290
12 Sep 2019, 22:08:04 UTC
13 Sep 2019, 10:31:56 UTC
Terminé et validé
43,146.81
194,051.90
3,444.05
ATLAS Simulation v1.01 (vbox64_mt_mcore_atlas)
windows_x86_64
this task Don't needed add on install
today after install of 2 adds on one task run correct:
the atlas task is running with 8 cpu and 16GB ram
I Added singularity and the cern update for virtual box
the vesion of the virtal box is and was 6.0.12
answer in 5 hour

guy pflieger
ID: 39952 · Report as offensive     Reply Quote
Guy PFLIEGER Mase HR

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Joined: 9 Sep 19
Posts: 23
Credit: 2,200,880
RAC: 28,893
Message 39953 - Posted: 17 Sep 2019, 15:12:14 UTC - in response to Message 39952.  

<core_client_version>7.14.2</core_client_version>
<![CDATA[
<message>
aborted by user</message>
<stderr_txt>
2019-09-17 11:04:24 (33716): vboxwrapper (7.7.26196): starting
2019-09-17 11:04:25 (33716): Feature: Checkpoint interval offset (537 seconds)
2019-09-17 11:04:25 (33716): Detected: VirtualBox VboxManage Interface (Version: 6.0.12)
2019-09-17 11:04:25 (33716): Detected: Minimum checkpoint interval (900.000000 seconds)
2019-09-17 11:04:25 (33716): Successfully copied 'init_data.xml' to the shared directory.
2019-09-17 11:04:27 (33716): Create VM. (boinc_b00441207d116391, slot#7)
2019-09-17 11:04:28 (33716): Setting Memory Size for VM. (10200MB)
2019-09-17 11:04:28 (33716): Setting CPU Count for VM. (8)
2019-09-17 11:04:28 (33716): Setting Chipset Options for VM.
2019-09-17 11:04:28 (33716): Setting Boot Options for VM.
2019-09-17 11:04:29 (33716): Setting Network Configuration for NAT.
2019-09-17 11:04:29 (33716): Enabling VM Network Access.
2019-09-17 11:04:29 (33716): Disabling USB Support for VM.
2019-09-17 11:04:29 (33716): Disabling COM Port Support for VM.
2019-09-17 11:04:30 (33716): Disabling LPT Port Support for VM.
2019-09-17 11:04:30 (33716): Disabling Audio Support for VM.
2019-09-17 11:04:30 (33716): Disabling Clipboard Support for VM.
2019-09-17 11:04:30 (33716): Disabling Drag and Drop Support for VM.
2019-09-17 11:04:31 (33716): Adding storage controller(s) to VM.
2019-09-17 11:04:31 (33716): Adding virtual disk drive to VM. (vm_image.vdi)
2019-09-17 11:04:31 (33716): Adding VirtualBox Guest Additions to VM.
2019-09-17 11:04:32 (33716): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2019-09-17 11:04:32 (33716): forwarding host port 60963 to guest port 80
2019-09-17 11:04:32 (33716): Enabling remote desktop for VM.
2019-09-17 11:04:32 (33716): Required extension pack not installed, remote desktop not enabled.
2019-09-17 11:04:32 (33716): Enabling shared directory for VM.
2019-09-17 11:04:33 (33716): Starting VM. (boinc_b00441207d116391, slot#7)
2019-09-17 11:04:43 (33716): Successfully started VM. (PID = '35180')
2019-09-17 11:04:43 (33716): Reporting VM Process ID to BOINC.
2019-09-17 11:04:54 (33716): Guest Log: BIOS: VirtualBox 6.0.12
2019-09-17 11:04:54 (33716): Guest Log: CPUID EDX: 0x178bfbff
2019-09-17 11:04:54 (33716): Guest Log: BIOS: ata0-0: PCHS=16383/16/63 LCHS=1024/255/63
2019-09-17 11:04:54 (33716): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2019-09-17 11:04:54 (33716): Guest Log: BIOS: Booting from Hard Disk...
2019-09-17 11:04:54 (33716): Guest Log: BIOS: KBD: unsupported int 16h function 03
2019-09-17 11:04:54 (33716): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000
2019-09-17 11:04:54 (33716): VM state change detected. (old = 'poweroff', new = 'running')
2019-09-17 11:05:04 (33716): Detected: Web Application Enabled (http://localhost:60963)
2019-09-17 11:05:14 (33716): Preference change detected
2019-09-17 11:05:14 (33716): Setting CPU throttle for VM. (90%)
2019-09-17 11:05:15 (33716): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2019-09-17 11:05:25 (33716): Guest Log: vboxguest: major 0, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2019-09-17 11:05:35 (33716): Guest Log: VBoxGuest: VBoxGuestCommonGuestCapsAcquire: pSession(0xffff88028deede10), OR(0x0), NOT(0xffffffff), flags(0x0)
2019-09-17 11:05:35 (33716): Guest Log: VBoxGuest: VBoxGuestCommonGuestCapsAcquire: pSession(0xffff88028dc83410), OR(0x0), NOT(0xffffffff), flags(0x0)
2019-09-17 11:05:35 (33716): Guest Log: VBoxGuest: VBoxGuestCommonGuestCapsAcquire: pSession(0xffff88028a14e610), OR(0x0), NOT(0xffffffff), flags(0x0)
2019-09-17 11:05:35 (33716): Guest Log: VBoxGuest: VBoxGuestCommonGuestCapsAcquire: pSession(0xffff88028e6eec10), OR(0x0), NOT(0xffffffff), flags(0x0)
2019-09-17 11:06:37 (33716): Guest Log: Copying input files into RunAtlas.
2019-09-17 11:06:37 (33716): Guest Log: Copied input files into RunAtlas.
2019-09-17 11:07:59 (33716): Guest Log: copied the webapp to /var/www
2019-09-17 11:07:59 (33716): Guest Log: This vm does not need to setup http proxy
2019-09-17 11:07:59 (33716): Guest Log: ATHENA_PROC_NUMBER=8
2019-09-17 11:07:59 (33716): Guest Log: Starting ATLAS job. (PandaID=4481546161 taskID=19000492)
2019-09-17 11:36:24 (33716): ERROR: Vboxwrapper lost communication with VirtualBox, rescheduling task for a later time.
2019-09-17 11:36:24 (33716): Powering off VM.
2019-09-17 11:36:25 (33716): Successfully stopped VM.

this task could not be run in one time until end with 16GB ram and 8 CPU
i abandonned so i had the technical detail
ID: 39953 · Report as offensive     Reply Quote
maeax

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Posts: 746
Credit: 27,653,552
RAC: 40,868
Message 39954 - Posted: 17 Sep 2019, 15:17:30 UTC

You are a new member, welcome.
So, read first Yeti's Checklist in Atlas-Forum.
ID: 39954 · Report as offensive     Reply Quote
Guy PFLIEGER Mase HR

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Joined: 9 Sep 19
Posts: 23
Credit: 2,200,880
RAC: 28,893
Message 39994 - Posted: 21 Sep 2019, 15:34:04 UTC - in response to Message 39954.  

now everything is running ok with the yeti's cheklist but i have a problem with the amd ryzen7 2700x
the ryzen is failing same with the whole update

something must be wrong

If you have a technical answer this would help us together!
Thank you very much

Under you find the message and if you discover the reason this could help all user of great multicore engine
the message upon the virtual box could be another error because i have virtual box 6.0.12 with extesion pack




<core_client_version>7.14.2</core_client_version>
<![CDATA[
<message>
Erreur non sp�cifi�e
(0x80004005) - exit code -2147467259 (0x80004005)</message>
<stderr_txt>
2019-09-18 07:45:58 (4916): vboxwrapper (7.7.26196): starting
2019-09-18 07:46:00 (4916): Feature: Checkpoint interval offset (232 seconds)
2019-09-18 07:46:00 (4916): Detected: VirtualBox VboxManage Interface (Version: 6.0.12)
2019-09-18 07:46:01 (4916): Detected: Minimum checkpoint interval (900.000000 seconds)
2019-09-18 07:46:01 (4916): Successfully copied 'init_data.xml' to the shared directory.
2019-09-18 07:46:03 (4916): Create VM. (boinc_984324a8159f33b2, slot#0)
2019-09-18 07:46:04 (4916): Setting Memory Size for VM. (10200MB)
2019-09-18 07:46:04 (4916): Setting CPU Count for VM. (8)
2019-09-18 07:46:05 (4916): Setting Chipset Options for VM.
2019-09-18 07:46:05 (4916): Setting Boot Options for VM.
2019-09-18 07:46:05 (4916): Setting Network Configuration for NAT.
2019-09-18 07:46:06 (4916): Enabling VM Network Access.
2019-09-18 07:46:06 (4916): Disabling USB Support for VM.
2019-09-18 07:46:06 (4916): Disabling COM Port Support for VM.
2019-09-18 07:46:07 (4916): Disabling LPT Port Support for VM.
2019-09-18 07:46:07 (4916): Disabling Audio Support for VM.
2019-09-18 07:46:07 (4916): Disabling Clipboard Support for VM.
2019-09-18 07:46:08 (4916): Disabling Drag and Drop Support for VM.
2019-09-18 07:46:08 (4916): Adding storage controller(s) to VM.
2019-09-18 07:46:08 (4916): Adding virtual disk drive to VM. (vm_image.vdi)
2019-09-18 07:46:10 (4916): Adding VirtualBox Guest Additions to VM.
2019-09-18 07:46:11 (4916): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2019-09-18 07:46:11 (4916): forwarding host port 54379 to guest port 80
2019-09-18 07:46:12 (4916): Enabling remote desktop for VM.
2019-09-18 07:46:12 (4916): Enabling shared directory for VM.
2019-09-18 07:46:13 (4916): Starting VM. (boinc_984324a8159f33b2, slot#0)
2019-09-18 07:46:16 (4916): Error in start VM for VM: -2147467259
Command:
VBoxManage -q startvm "boinc_984324a8159f33b2" --type headless
Output:
Waiting for VM "boinc_984324a8159f33b2" to power on...
VBoxManage.exe: error: Not in a hypervisor partition (HVP=0) (VERR_NEM_NOT_AVAILABLE).
VBoxManage.exe: error: AMD-V is disabled in the BIOS (or by the host OS) (VERR_SVM_DISABLED)
VBoxManage.exe: error: Details: code E_FAIL (0x80004005), component ConsoleWrap, interface IConsole

2019-09-18 07:46:16 (4916): VM failed to start.
2019-09-18 07:46:16 (4916): Powering off VM.
2019-09-18 07:46:16 (4916): Deregistering VM. (boinc_984324a8159f33b2, slot#0)
2019-09-18 07:46:16 (4916): Removing network bandwidth throttle group from VM.
2019-09-18 07:46:16 (4916): Removing storage controller(s) from VM.
2019-09-18 07:46:17 (4916): Removing VM from VirtualBox.
2019-09-18 07:46:17 (4916): Removing virtual disk drive from VirtualBox.

Hypervisor System Log:

00:00:00.913520 OCI: Local config file 'C:\Users\guypf\.VirtualBox\oci_config' does not exist
00:00:00.913597 OCI: Original config file 'C:\Users\guypf\.oci\config' does not exist
00:00:00.913598 OCI: Reading profiles finished with status ERROR_SUCCESS
00:00:00.913604 ExtPack: Created cloud provider 'OCI' (hrc=ERROR_SUCCESS)
00:00:00.913626 VirtualBox: object created
00:00:02.152834 ERROR [COM]: aRC=VBOX_E_OBJECT_NOT_FOUND (0x80bb0001) aIID={d0a0163f-e254-4e5b-a1f2-011cf991c38d} aComponent={VirtualBoxWrap} aText={Could not find a registered machine named 'boinc_984324a8159f33b2'}, preserve=false aResultDetail=0
00:00:04.008270 Saving settings file "C:\Users\guypf\.VirtualBox\VirtualBox.xml" with version "1.12-windows"
00:00:04.292055 Saving settings file "C:\ProgramData\BOINC\slots\0\boinc_984324a8159f33b2\boinc_984324a8159f33b2.vbox" with version "1.16-windows"
00:00:04.411992 Saving settings file "C:\Users\guypf\.VirtualBox\VirtualBox.xml" with version "1.12-windows"
00:00:04.588897 Saving settings file "C:\ProgramData\BOINC\slots\0\boinc_984324a8159f33b2\boinc_984324a8159f33b2.vbox" with version "1.16-windows"
00:00:05.000863 Saving settings file "C:\ProgramData\BOINC\slots\0\boinc_984324a8159f33b2\boinc_984324a8159f33b2.vbox" with version "1.16-windows"
00:00:05.408634 Saving settings file "C:\ProgramData\BOINC\slots\0\boinc_984324a8159f33b2\boinc_984324a8159f33b2.vbox" with version "1.16-windows"
00:00:05.754658 Saving settings file "C:\ProgramData\BOINC\slots\0\boinc_984324a8159f33b2\boinc_984324a8159f33b2.vbox" with version "1.16-windows"
00:00:06.132984 Saving settings file "C:\ProgramData\BOINC\slots\0\boinc_984324a8159f33b2\boinc_984324a8159f33b2.vbox" with version "1.16-windows"
00:00:06.432451 Saving settings file "C:\ProgramData\BOINC\slots\0\boinc_984324a8159f33b2\boinc_984324a8159f33b2.vbox" with version "1.16-windows"
00:00:06.733204 Saving settings file "C:\ProgramData\BOINC\slots\0\boinc_984324a8159f33b2\boinc_984324a8159f33b2.vbox" with version "1.16-windows"
00:00:07.104784 Saving settings file "C:\ProgramData\BOINC\slots\0\boinc_984324a8159f33b2\boinc_984324a8159f33b2.vbox" with version "1.16-windows"
00:00:07.510629 Saving settings file "C:\ProgramData\BOINC\slots\0\boinc_984324a8159f33b2\boinc_984324a8159f33b2.vbox" with version "1.16-windows"
00:00:07.797652 Saving settings file "C:\ProgramData\BOINC\slots\0\boinc_984324a8159f33b2\boinc_984324a8159f33b2.vbox" with version "1.16-windows"
00:00:08.156138 Saving settings file "C:\ProgramData\BOINC\slots\0\boinc_984324a8159f33b2\boinc_984324a8159f33b2.vbox" with version "1.16-windows"
00:00:08.449445 Saving settings file "C:\ProgramData\BOINC\slots\0\boinc_984324a8159f33b2\boinc_984324a8159f33b2.vbox" with version "1.16-windows"
00:00:08.830557 Saving settings file "C:\ProgramData\BOINC\slots\0\boinc_984324a8159f33b2\boinc_984324a8159f33b2.vbox" with version "1.16-windows"
00:00:09.138873 Saving settings file "C:\ProgramData\BOINC\slots\0\boinc_984324a8159f33b2\boinc_984324a8159f33b2.vbox" with version "1.16-windows"
00:00:09.504690 ERROR [COM]: aRC=VBOX_E_OBJECT_NOT_FOUND (0x80bb0001) aIID={5047460a-265d-4538-b23e-ddba5fb84976} aComponent={SessionMachine} aText={No storage device attached to device slot 0 on port 0 of controller 'Hard Disk Controller'}, preserve=false aResultDetail=0
00:00:10.688202 ERROR [COM]: aRC=VBOX_E_OBJECT_NOT_FOUND (0x80bb0001) aIID={5047460a-265d-4538-b23e-ddba5fb84976} aComponent={SessionMachine} aText={No storage device attached to device slot 0 on port 0 of controller 'Hard Disk Controller'}, preserve=false aResultDetail=0
00:00:10.688529 Saving settings file "C:\Users\guypf\.VirtualBox\VirtualBox.xml" with version "1.12-windows"
00:00:10.818596 Saving settings file "C:\ProgramData\BOINC\slots\0\boinc_984324a8159f33b2\boinc_984324a8159f33b2.vbox" with version "1.16-windows"
00:00:11.080419 ERROR [COM]: aRC=VBOX_E_OBJECT_NOT_FOUND (0x80bb0001) aIID={5047460a-265d-4538-b23e-ddba5fb84976} aComponent={SessionMachine} aText={No storage device attached to device slot 0 on port 1 of controller 'Hard Disk Controller'}, preserve=false aResultDetail=0
00:00:11.082398 ERROR [COM]: aRC=VBOX_E_OBJECT_NOT_FOUND (0x80bb0001) aIID={5047460a-265d-4538-b23e-ddba5fb84976} aComponent={SessionMachine} aText={No storage device attached to device slot 0 on port 1 of controller 'Hard Disk Controller'}, preserve=false aResultDetail=0
00:00:11.082582 Saving settings file "C:\Users\guypf\.VirtualBox\VirtualBox.xml" with version "1.12-windows"
00:00:11.213865 Saving settings file "C:\Users\guypf\.VirtualBox\VirtualBox.xml" with version "1.12-windows"
00:00:11.251718 Saving settings file "C:\ProgramData\BOINC\slots\0\boinc_984324a8159f33b2\boinc_984324a8159f33b2.vbox" with version "1.16-windows"
00:00:11.681135 Saving settings file "C:\ProgramData\BOINC\slots\0\boinc_984324a8159f33b2\boinc_984324a8159f33b2.vbox" with version "1.16-windows"
00:00:12.018180 Saving settings file "C:\ProgramData\BOINC\slots\0\boinc_984324a8159f33b2\boinc_984324a8159f33b2.vbox" with version "1.16-windows"
00:00:12.998466 Saving settings file "C:\ProgramData\BOINC\slots\0\boinc_984324a8159f33b2\boinc_984324a8159f33b2.vbox" with version "1.16-windows"
00:00:13.657423 Saving settings file "C:\ProgramData\BOINC\slots\0\boinc_984324a8159f33b2\boinc_984324a8159f33b2.vbox" with version "1.16-windows"
00:00:14.114782 ERROR [COM]: aRC=VBOX_E_OBJECT_NOT_FOUND (0x80bb0001) aIID={5047460a-265d-4538-b23e-ddba5fb84976} aComponent={SessionMachine} aText={No storage device attached to device slot 1 on port 0 of controller 'Hard Disk Controller'}, preserve=false aResultDetail=0
00:00:14.114866 ERROR [COM]: aRC=VBOX_E_OBJECT_NOT_FOUND (0x80bb0001) aIID={5047460a-265d-4538-b23e-ddba5fb84976} aComponent={SessionMachine} aText={No storage device attached to device slot 1 on port 0 of controller 'Hard Disk Controller'}, preserve=false aResultDetail=0
00:00:14.115205 ERROR [COM]: aRC=VBOX_E_OBJECT_NOT_FOUND (0x80bb0001) aIID={5047460a-265d-4538-b23e-ddba5fb84976} aComponent={SessionMachine} aText={No storage device attached to device slot 1 on port 1 of controller 'Hard Disk Controller'}, preserve=false aResultDetail=0
00:00:14.115272 ERROR [COM]: aRC=VBOX_E_OBJECT_NOT_FOUND (0x80bb0001) aIID={5047460a-265d-4538-b23e-ddba5fb84976} aComponent={SessionMachine} aText={No storage device attached to device slot 1 on port 1 of controller 'Hard Disk Controller'}, preserve=false aResultDetail=0
00:00:14.128956 ERROR [COM]: aRC=E_FAIL (0x80004005) aIID={5047460a-265d-4538-b23e-ddba5fb84976} aComponent={SessionMachine} aText={This machine does not have any snapshots}, preserve=false aResultDetail=0
00:00:16.716870 Saving settings file "C:\ProgramData\BOINC\slots\0\boinc_984324a8159f33b2\boinc_984324a8159f33b2.vbox" with version "1.16-windows"
00:00:17.061305 ERROR [COM]: aRC=E_FAIL (0x80004005) aIID={5047460a-265d-4538-b23e-ddba5fb84976} aComponent={SessionMachine} aText={This machine does not have any snapshots}, preserve=false aResultDetail=0
00:00:17.181503 Saving settings file "C:\ProgramData\BOINC\slots\0\boinc_984324a8159f33b2\boinc_984324a8159f33b2.vbox" with version "1.16-windows"
00:00:17.509702 Saving settings file "C:\ProgramData\BOINC\slots\0\boinc_984324a8159f33b2\boinc_984324a8159f33b2.vbox" with version "1.16-windows"
00:00:17.868428 Saving settings file "C:\Users\guypf\.VirtualBox\VirtualBox.xml" with version "1.12-windows"
00:00:23.246039 main VirtualBox: object deletion starts
00:00:23.248559 Watcher ERROR [COM]: aRC=E_ACCESSDENIED (0x80070005) aIID={d0a0163f-e254-4e5b-a1f2-011cf991c38d} aComponent={VirtualBoxWrap} aText={The object is not ready}, preserve=false aResultDetail=0
00:00:23.248717 main VirtualBox: object deleted

VM Execution Log:


VM Startup Log:


VM Trace Log:

on: AMD Ryzen 7 2700 Eight-Core Processor
Processor#5 speed: unknown
Processor#5 description: AMD Ryzen 7 2700 Eight-Core Processor
Processor#6 speed: unknown
Processor#6 description: AMD Ryzen 7 2700 Eight-Core Processor
Processor#7 speed: unknown
Processor#7 description: AMD Ryzen 7 2700 Eight-Core Processor
Processor#8 speed: unknown
Processor#8 description: AMD Ryzen 7 2700 Eight-Core Processor
Processor#9 speed: unknown
Processor#9 description: AMD Ryzen 7 2700 Eight-Core Processor
Processor#10 speed: unknown
Processor#10 description: AMD Ryzen 7 2700 Eight-Core Processor
Processor#11 speed: unknown
Processor#11 description: AMD Ryzen 7 2700 Eight-Core Processor
Processor#12 speed: unknown
Processor#12 description: AMD Ryzen 7 2700 Eight-Core Processor
Processor#13 speed: unknown
Processor#13 description: AMD Ryzen 7 2700 Eight-Core Processor
Processor#14 speed: unknown
Processor#14 description: AMD Ryzen 7 2700 Eight-Core Processor
Processor#15 speed: unknown
Processor#15 description: AMD Ryzen 7 2700 Eight-Core Processor
Memory size: 16337 MByte
Memory available: 11107 MByte
Operating system: Windows 10
Operating system version: 10.0.18362

2019-09-18 07:46:01 (4916):
Command: VBoxManage -q showvminfo "boinc_984324a8159f33b2" --machinereadable
Exit Code: -2135228415
Output:
VBoxManage.exe: error: Could not find a registered machine named 'boinc_984324a8159f33b2'
VBoxManage.exe: error: Details: code VBOX_E_OBJECT_NOT_FOUND (0x80bb0001), component VirtualBoxWrap, interface IVirtualBox, callee IUnknown
VBoxManage.exe: error: Context: "FindMachine(Bstr(VMNameOrUuid).raw(), machine.asOutParam())" at line 2621 of file VBoxManageInfo.cpp

2019-09-18 07:46:02 (4916):
Command: VBoxManage -q showhdinfo "C:\ProgramData\BOINC\slots\0/vm_image.vdi"
Exit Code: 0
Output:
UUID: 84a4bdf1-8d09-4fdb-b7b6-b877964ebf9f
Parent UUID: base
State: created
Type: normal (base)
Location: C:\ProgramData\BOINC\slots\0\vm_image.vdi
Storage format: VDI
Format variant: dynamic default
Capacity: 20480 MBytes
Size on disk: 1665 MBytes
Encryption: disabled

2019-09-18 07:46:03 (4916):
Command: VBoxManage -q showhdinfo "C:\ProgramData\BOINC\slots\0/vm_image.vdi"
Exit Code: 0
Output:
UUID: 84a4bdf1-8d09-4fdb-b7b6-b877964ebf9f
Parent UUID: base
State: created
Type: normal (base)
Location: C:\ProgramData\BOINC\slots\0\vm_image.vdi
Storage format: VDI
Format variant: dynamic default
Capacity: 20480 MBytes
Size on disk: 1665 MBytes
Encryption: disabled

2019-09-18 07:46:03 (4916):
Command: VBoxManage -q closemedium disk "C:\ProgramData\BOINC\slots\0/vm_image.vdi"
Exit Code: 0
Output:

2019-09-18 07:46:04 (4916):
Command: VBoxManage -q createvm --name "boinc_984324a8159f33b2" --basefolder "C:\ProgramData\BOINC\slots\0" --ostype "Linux26_64" --register
Exit Code: 0
Output:
Virtual machine 'boinc_984324a8159f33b2' is created and registered.
UUID: 57ed69c5-71e6-46ca-88b0-e2603caab5e5
Settings file: 'C:\ProgramData\BOINC\slots\0\boinc_984324a8159f33b2\boinc_984324a8159f33b2.vbox'

2019-09-18 07:46:04 (4916):
Command: VBoxManage -q modifyvm "boinc_984324a8159f33b2" --description "4d7NDmp7gTvnsSi4apGgGQJmABFKDmABFKDmXRpbDmABFKDmy69lVm_1"
Exit Code: 0
Output:

2019-09-18 07:46:04 (4916):
Command: VBoxManage -q modifyvm "boinc_984324a8159f33b2" --memory 10200
Exit Code: 0
Output:

2019-09-18 07:46:05 (4916):
Command: VBoxManage -q modifyvm "boinc_984324a8159f33b2" --cpus 8
Exit Code: 0
Output:

2019-09-18 07:46:05 (4916):
Command: VBoxManage -q modifyvm "boinc_984324a8159f33b2" --acpi on --ioapic on
Exit Code: 0
Output:

2019-09-18 07:46:05 (4916):
Command: VBoxManage -q modifyvm "boinc_984324a8159f33b2" --boot1 disk --boot2 dvd --boot3 none --boot4 none
Exit Code: 0
Output:

2019-09-18 07:46:06 (4916):
Command: VBoxManage -q modifyvm "boinc_984324a8159f33b2" --nic1 nat --natdnsproxy1 on --cableconnected1 off
Exit Code: 0
Output:

2019-09-18 07:46:06 (4916):
Command: VBoxManage -q modifyvm "boinc_984324a8159f33b2" --cableconnected1 on
Exit Code: 0
Output:

2019-09-18 07:46:06 (4916):
Command: VBoxManage -q modifyvm "boinc_984324a8159f33b2" --usb off
Exit Code: 0
Output:

2019-09-18 07:46:07 (4916):
Command: VBoxManage -q modifyvm "boinc_984324a8159f33b2" --uart1 off --uart2 off
Exit Code: 0
Output:

2019-09-18 07:46:07 (4916):
Command: VBoxManage -q modifyvm "boinc_984324a8159f33b2" --lpt1 off --lpt2 off
Exit Code: 0
Output:

2019-09-18 07:46:07 (4916):
Command: VBoxManage -q modifyvm "boinc_984324a8159f33b2" --audio none
Exit Code: 0
Output:

2019-09-18 07:46:08 (4916):
Command: VBoxManage -q modifyvm "boinc_984324a8159f33b2" --clipboard disabled
Exit Code: 0
Output:

2019-09-18 07:46:08 (4916):
Command: VBoxManage -q modifyvm "boinc_984324a8159f33b2" --draganddrop disabled
Exit Code: 0
Output:

2019-09-18 07:46:08 (4916):
Command: VBoxManage -q storagectl "boinc_984324a8159f33b2" --name "Hard Disk Controller" --add "ide" --controller "PIIX4"
Exit Code: 0
Output:

2019-09-18 07:46:10 (4916):
Command: VBoxManage -q storageattach "boinc_984324a8159f33b2" --storagectl "Hard Disk Controller" --port 0 --device 0 --type hdd --setuuid "" --medium "C:\ProgramData\BOINC\slots\0/vm_image.vdi"
Exit Code: 0
Output:

2019-09-18 07:46:11 (4916):
Command: VBoxManage -q storageattach "boinc_984324a8159f33b2" --storagectl "Hard Disk Controller" --port 1 --device 0 --type dvddrive --medium "C:\Program Files\Oracle\VirtualBox/VBoxGuestAdditions.iso"
Exit Code: 0
Output:

2019-09-18 07:46:11 (4916):
Command: VBoxManage -q bandwidthctl "boinc_984324a8159f33b2" add "boinc_984324a8159f33b2_net" --type network --limit 1024G
Exit Code: 0
Output:

2019-09-18 07:46:12 (4916):
Command: VBoxManage -q modifyvm "boinc_984324a8159f33b2" --natpf1 ",tcp,127.0.0.1,54379,,80"
Exit Code: 0
Output:

2019-09-18 07:46:12 (4916):
Command: VBoxManage -q list extpacks
Exit Code: 0
Output:
Extension Packs: 1
Pack no. 0: Oracle VM VirtualBox Extension Pack
Version: 6.0.12
Revision: 133076
Edition:
Description: USB 2.0 and USB 3.0 Host Controller, Host Webcam, VirtualBox RDP, PXE ROM, Disk Encryption, NVMe.
VRDE Module: VBoxVRDP
Usable: true
Why unusable:

2019-09-18 07:46:12 (4916):
Command: VBoxManage -q modifyvm "boinc_984324a8159f33b2" --vrde on --vrdeextpack default --vrdeauthlibrary default --vrdeauthtype null --vrdeport 54380
Exit Code: 0
Output:

2019-09-18 07:46:13 (4916):
Command: VBoxManage -q sharedfolder add "boinc_984324a8159f33b2" --name "shared" --hostpath "C:\ProgramData\BOINC\slots\0/shared"
Exit Code: 0
Output:

2019-09-18 07:46:16 (4916):
Command: VBoxManage -q startvm "boinc_984324a8159f33b2" --type headless
Exit Code: -2147467259
Output:
Waiting for VM "boinc_984324a8159f33b2" to power on...
VBoxManage.exe: error: Not in a hypervisor partition (HVP=0) (VERR_NEM_NOT_AVAILABLE).
VBoxManage.exe: error: AMD-V is disabled in the BIOS (or by the host OS) (VERR_SVM_DISABLED)
VBoxManage.exe: error: Details: code E_FAIL (0x80004005), component ConsoleWrap, interface IConsole

2019-09-18 07:46:16 (4916):
Command: VBoxManage -q snapshot "boinc_984324a8159f33b2" list
Exit Code: -108
Output:
This machine does not have any snapshots

2019-09-18 07:46:16 (4916):
Command: VBoxManage -q bandwidthctl "boinc_984324a8159f33b2" remove "boinc_984324a8159f33b2_net"
Exit Code: 0
Output:

2019-09-18 07:46:17 (4916):
Command: VBoxManage -q storagectl "boinc_984324a8159f33b2" --name "Hard Disk Controller" --remove
Exit Code: 0
Output:

2019-09-18 07:46:17 (4916):
Command: VBoxManage -q unregistervm "boinc_984324a8159f33b2" --delete
Exit Code: 0
Output:
0%...10%...20%...30%...40%...50%...60%...70%...80%...90%...100%

2019-09-18 07:46:17 (4916):
Command: VBoxManage -q closemedium disk "C:\ProgramData\BOINC\slots\0/vm_image.vdi" --delete
Exit Code: 0
Output:
0%...10%...20%...30%...40%...50%...60%...70%...80%...90%...100%

07:46:23 (4916): called boinc_finish(-2147467259)

guy pflieger france
ID: 39994 · Report as offensive     Reply Quote
maeax

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Message 39997 - Posted: 21 Sep 2019, 16:00:27 UTC

1. This communication is not for this thread. The Admins maybe change it.
2. VBoxManage.exe: error: AMD-V is disabled in the BIOS (or by the host OS) (VERR_SVM_DISABLED)
You need to enable SVM in BIOS from the Ryzen. Only sixtrack don't need it.
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Guy PFLIEGER Mase HR

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Message 40005 - Posted: 23 Sep 2019, 7:00:00 UTC - in response to Message 37399.  

Inside of the Ryzen 7 bios is a virtualisation option
This can be enabled only if you upgrade Windows 10 from family to professionnal
As soon as you activated the hyper v manually then you must restart you computer
He is recognizing the virtualization and you must control them in the bios setup
The result by atlas: with or without virtualization option and with or without hyper V is the computer failing in the atlas tasks
The computer that did not fail are intel I7 with graphic cards
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Guy PFLIEGER Mase HR

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Message 40007 - Posted: 23 Sep 2019, 11:08:47 UTC - in response to Message 40005.  

I found the Reason why an AMD ryzen 2700 X can not crunch for atlas in his commercial configuration:
an amd ryzen 7 2700x need a minimum of 70 Gbytes of Ram
Then with all ugrades of cern he must also have Windows 10 professionnal and activate hyper V and restart the computer
I had only 16 Gb and he could not run
The use of the computer need minimal 6GB
Commercial seen the ram must be upgradet Inside of an amd ryzen to 128 Gb and then you have the bigest racer you could mean in your life
evrything cames from yetis checklist analysed in detail

Best Regards
Guy PFLIEGER France
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Guy PFLIEGER Mase HR

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Message 40008 - Posted: 23 Sep 2019, 11:25:32 UTC - in response to Message 40007.  

https://fr.ign.com/tech/9798/news/hardware-une-barrette-de-ram-de-128gb-par-samsung
this is the true answer
I need one

Guy PFLIEGER France
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Guy PFLIEGER Mase HR

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Message 40017 - Posted: 24 Sep 2019, 16:30:55 UTC - in response to Message 40007.  

now came the true answer for amd Ryzen from a computer maintenance center: 32GB ram
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