Stderr output

<core_client_version>7.22.2</core_client_version>
<![CDATA[
<stderr_txt>
2026-06-06 00:57:21 (10596): vboxwrapper version 26210
2026-06-06 00:57:21 (10596): BOINC client version: 7.22.2
2026-06-06 00:57:21 (10596): Detected: VirtualBox VboxManage Interface (Version: 6.1.34)
2026-06-06 00:57:21 (10596): Successfully copied 'init_data.xml' to the shared directory.
2026-06-06 00:57:22 (10596): Create VM. (boinc_152e6126e012ee0e, slot#7)
2026-06-06 00:57:22 (10596): Setting Memory Size for VM. (4800MB)
2026-06-06 00:57:22 (10596): Setting CPU Count for VM. (8)
2026-06-06 00:57:23 (10596): Setting Chipset Options for VM.
2026-06-06 00:57:23 (10596): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-06-06 00:57:23 (10596): Setting Boot Options for VM.
2026-06-06 00:57:24 (10596): Setting Network Configuration for NAT. (Driver: virtio)
2026-06-06 00:57:24 (10596): Enabling VM Network Access.
2026-06-06 00:57:24 (10596): Disabling USB Support for VM.
2026-06-06 00:57:24 (10596): Disabling COM Port Support for VM.
2026-06-06 00:57:25 (10596): Disabling LPT Port Support for VM.
2026-06-06 00:57:25 (10596): Disabling Audio Support for VM.
2026-06-06 00:57:25 (10596): Disabling Clipboard Support for VM.
2026-06-06 00:57:25 (10596): Disabling Drag and Drop Support for VM.
2026-06-06 00:57:26 (10596): Adding storage controller(s) to VM.
2026-06-06 00:57:26 (10596): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-06-06 00:57:27 (10596): Adding VirtualBox Guest Additions to VM.
2026-06-06 00:57:27 (10596): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-06-06 00:57:27 (10596): forwarding host port 63871 to guest port 80
2026-06-06 00:57:28 (10596): Enabling remote desktop for VM.
2026-06-06 00:57:28 (10596): Required extension pack not installed, remote desktop not enabled.
2026-06-06 00:57:28 (10596): Enabling shared directory for VM.
2026-06-06 00:57:28 (10596): Starting VM using VBoxManage interface. (boinc_152e6126e012ee0e, slot#7)
2026-06-06 00:57:32 (10596): Successfully started VM. (PID = '4124')
2026-06-06 00:57:32 (10596): Reporting VM Process ID to BOINC.
2026-06-06 00:57:32 (10596): Guest Log: BIOS: VirtualBox 6.1.34
2026-06-06 00:57:32 (10596): Guest Log: CPUID EDX: 0x178bfbff
2026-06-06 00:57:32 (10596): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-06-06 00:57:32 (10596): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-06-06 00:57:32 (10596): VM state change detected. (old = 'poweredoff', new = 'running')
2026-06-06 00:57:32 (10596): Detected: Web Application Enabled (http://localhost:63871)
2026-06-06 00:57:32 (10596): Preference change detected
2026-06-06 00:57:32 (10596): Setting CPU throttle for VM. (100%)
2026-06-06 00:57:33 (10596): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-06-06 00:57:34 (10596): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-06-06 00:57:34 (10596): Guest Log: BIOS: Booting from Hard Disk...
2026-06-06 00:57:37 (10596): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-06-06 00:57:37 (10596): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-06-06 00:57:37 (10596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-06-06 00:57:37 (10596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-06-06 00:57:37 (10596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-06-06 00:57:37 (10596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-06-06 00:57:37 (10596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-06-06 00:57:37 (10596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-06-06 00:57:37 (10596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-06-06 00:57:37 (10596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-06-06 00:57:37 (10596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-06-06 00:57:37 (10596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-06-06 00:57:37 (10596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-06-06 00:57:37 (10596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-06-06 00:57:37 (10596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-06-06 00:57:37 (10596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-06-06 00:57:37 (10596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-06-06 00:57:37 (10596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-06-06 00:57:37 (10596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-06-06 00:57:37 (10596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-06-06 00:57:37 (10596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-06-06 00:57:37 (10596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-06-06 00:57:37 (10596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-06-06 00:57:37 (10596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-06-06 00:57:37 (10596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-06-06 00:57:37 (10596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-06-06 00:57:37 (10596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-06-06 00:57:37 (10596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-06-06 00:57:37 (10596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-06-06 00:57:37 (10596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-06-06 00:57:37 (10596): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-06-06 00:57:37 (10596): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-06-06 00:57:42 (10596): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-06-06 00:57:42 (10596): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-06-06 00:57:48 (10596): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-06-06 00:57:48 (10596): Guest Log: 00:00:00.000307 main     Log opened 2026-06-06T00:57:46.403716000Z
2026-06-06 00:57:48 (10596): Guest Log: 00:00:00.000406 main     OS Product: Linux
2026-06-06 00:57:48 (10596): Guest Log: 00:00:00.000433 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-06-06 00:57:48 (10596): Guest Log: 00:00:00.000452 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-06-06 00:57:48 (10596): Guest Log: 00:00:00.000472 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-06-06 00:57:48 (10596): Guest Log: 00:00:00.000473 main     Process ID: 1369
2026-06-06 00:57:48 (10596): Guest Log: 00:00:00.000473 main     Package type: LINUX_64BITS_GENERIC
2026-06-06 00:57:48 (10596): Guest Log: 00:00:00.001094 main     5.2.32 r132073 started. Verbose level = 0
2026-06-06 00:57:48 (10596): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-06-06 00:57:48 (10596): Guest Log: [INFO] Mounting shared directory
2026-06-06 00:57:48 (10596): Guest Log: [INFO] Checking for init_data.xml
2026-06-06 00:57:53 (10596): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-06-06 00:57:53 (10596): Guest Log: [INFO] Detected branch: prod
2026-06-06 00:57:54 (10596): Guest Log: This is the prod version of the ATLAS job wrapper
2026-06-06 00:57:54 (10596): Guest Log: Copying input files
2026-06-06 00:57:55 (10596): Guest Log: Copied input files into RunAtlas.
2026-06-06 00:57:55 (10596): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-06-06 00:57:55 (10596): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-06-06 00:57:55 (10596): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-06-06 00:57:55 (10596): Guest Log: Further information can be found at the LHC@home message board.
2026-06-06 00:57:58 (10596): Guest Log: 00:00:10.019103 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 880 991 000ns (GuestNow=1 780 700 277 528 232 000 ns GuestLast=1 780 707 466 409 223 000 ns fSetTimeLastLoop=true )
2026-06-06 00:58:04 (10596): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-06-06 00:58:04 (10596): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-06-06 00:58:04 (10596): Guest Log: 2.6.3.0 1645 0 30160 160194 4 1 3117657 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-06-06 00:58:05 (10596): Guest Log: copied the webapp to /var/www
2026-06-06 00:58:05 (10596): Guest Log: ATHENA_PROC_NUMBER=8
2026-06-06 00:58:05 (10596): Guest Log: ATHENA_CORE_NUMBER=8
2026-06-06 00:58:05 (10596): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-06-06 00:58:05 (10596): Guest Log:  *** Starting ATLAS job. (PandaID=7167612604 taskID=50587899) ***
2026-06-06 01:15:14 (10596): Preference change detected
2026-06-06 01:15:14 (10596): Setting CPU throttle for VM. (100%)
2026-06-06 01:15:15 (10596): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-06-06 01:26:45 (10596): Preference change detected
2026-06-06 01:26:45 (10596): Setting CPU throttle for VM. (100%)
2026-06-06 01:26:45 (10596): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-06-06 01:26:53 (10596): Preference change detected
2026-06-06 01:26:53 (10596): Setting CPU throttle for VM. (100%)
2026-06-06 01:26:53 (10596): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-06-06 02:03:51 (10596): Guest Log:  *** Job finished ***
2026-06-06 02:03:51 (10596): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-06-06 02:03:51 (10596): Guest Log: 2026-06-06 00:03:41,323 | INFO     | all workflow threads have been joined
2026-06-06 02:03:51 (10596): Guest Log: 2026-06-06 00:03:41,323 | INFO     | end of generic workflow (traces error code: 0)
2026-06-06 02:03:51 (10596): Guest Log: 2026-06-06 00:03:41,324 | INFO     | traces error code: 0
2026-06-06 02:03:51 (10596): Guest Log: 2026-06-06 00:03:41,324 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-06-06 02:03:51 (10596): Guest Log: 2026-06-06 00:03:49,002 | INFO     | PID=6186 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-06-06 02:03:51 (10596): Guest Log: 2026-06-06 00:03:49,003 | INFO     | found 0 job(s) in 20 queues
2026-06-06 02:03:51 (10596): Guest Log: 2026-06-06 00:03:49,003 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-06-06 02:03:51 (10596): Guest Log: 2026-06-06 00:03:49,003 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-06-06 02:03:51 (10596): Guest Log: 2026-06-06 00:03:49,003 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-06-06 02:03:51 (10596): Guest Log: 2026-06-06 00:03:49,003 | INFO     | [monitor] control thread has ended
2026-06-06 02:03:51 (10596): Guest Log: 2026-06-06 00:03:49,119 [wrapper] ==== pilot stdout END ====
2026-06-06 02:03:51 (10596): Guest Log: 2026-06-06 00:03:49,123 [wrapper] ==== wrapper stdout RESUME ====
2026-06-06 02:03:51 (10596): Guest Log: 2026-06-06 00:03:49,126 [wrapper] pilotpid: 6186
2026-06-06 02:03:51 (10596): Guest Log: 2026-06-06 00:03:49,129 [wrapper] Pilot exit status: 0
2026-06-06 02:03:51 (10596): Guest Log: 2026-06-06 00:03:49,176 [wrapper] pandaids: 7167612604
2026-06-06 02:03:51 (10596): Guest Log: 2026-06-06 00:03:49,204 [wrapper] cleanup supervisor_pilot 25064 6187
2026-06-06 02:03:51 (10596): Guest Log: 2026-06-06 00:03:49,208 [wrapper] Test setup, not cleaning
2026-06-06 02:03:51 (10596): Guest Log: 2026-06-06 00:03:49,213 [wrapper] apfmon messages muted
2026-06-06 02:03:51 (10596): Guest Log: 2026-06-06 00:03:49,217 [wrapper] ==== wrapper stdout END ====
2026-06-06 02:03:51 (10596): Guest Log: 2026-06-06 00:03:49,222 [wrapper] ==== wrapper stderr END ====
2026-06-06 02:03:51 (10596): Guest Log:  *** Error codes and diagnostics ***
2026-06-06 02:03:51 (10596): Guest Log:     "exeErrorCode": 0,
2026-06-06 02:03:51 (10596): Guest Log:     "pilotErrorCode": 0,
2026-06-06 02:03:51 (10596): Guest Log:  *** Listing of results directory ***
2026-06-06 02:03:51 (10596): Guest Log: total 144976
2026-06-06 02:03:51 (10596): Guest Log: -rw-r--r--. 1 atlas atlas      5630 Jun  5 19:08 queuedata.json
2026-06-06 02:03:51 (10596): Guest Log: -rw-r--r--. 1 atlas atlas    706490 Jun  5 19:08 pilot3.tar.gz
2026-06-06 02:03:51 (10596): Guest Log: -rwx------. 1 atlas atlas     36281 Jun  5 19:10 runpilot2-wrapper.sh
2026-06-06 02:03:51 (10596): Guest Log: -rwxr-xr-x. 1 atlas atlas     15665 Jun  5 22:57 start_atlas.sh
2026-06-06 02:03:51 (10596): Guest Log: -rwxr-xr-x. 1 atlas atlas    719741 Jun  5 22:57 input.tar.gz
2026-06-06 02:03:51 (10596): Guest Log: -rwxr-xr-x. 1 atlas atlas      9387 Jun  5 22:57 init_data.xml
2026-06-06 02:03:51 (10596): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  5 22:57 EVNT.50587896._000334.pool.root.1 -> /data/./ATLAS.root_0
2026-06-06 02:03:51 (10596): Guest Log: -rw-r--r--. 1 atlas atlas      2485 Jun  5 22:58 pandaJob.out
2026-06-06 02:03:51 (10596): Guest Log: -rw-------. 1 atlas atlas    995173 Jun  5 23:05 agis_schedconf.cvmfs.json
2026-06-06 02:03:51 (10596): Guest Log: -rw-------. 1 atlas atlas         0 Jun  5 23:05 agis_ddmendpoints.agis.ALL.json
2026-06-06 02:03:51 (10596): Guest Log: -rw-------. 1 atlas atlas   1249991 Jun  5 23:05 cric_ddmendpoints.json
2026-06-06 02:03:51 (10596): Guest Log: -rw-------. 1 atlas atlas       431 Jun  5 23:05 workernode_map.json
2026-06-06 02:03:51 (10596): Guest Log: drwx------. 5 atlas atlas      4096 Jun  5 23:05 pilot3
2026-06-06 02:03:51 (10596): Guest Log: -rw-------. 1 atlas atlas 143332112 Jun  6 00:02 HITS.50587899._007604.pool.root.1
2026-06-06 02:03:51 (10596): Guest Log: -rw-------. 1 atlas atlas        95 Jun  6 00:02 pilot_heartbeat.json
2026-06-06 02:03:51 (10596): Guest Log: -rw-------. 1 atlas atlas      1027 Jun  6 00:03 memory_monitor_summary.json
2026-06-06 02:03:51 (10596): Guest Log: -rw-------. 1 atlas atlas    293349 Jun  6 00:03 log.50587899._007604.job.log.tgz.1
2026-06-06 02:03:51 (10596): Guest Log: -rw-------. 1 atlas atlas      6405 Jun  6 00:03 heartbeat_new.json
2026-06-06 02:03:51 (10596): Guest Log: -rw-------. 1 atlas atlas      6296 Jun  6 00:03 heartbeat.json
2026-06-06 02:03:51 (10596): Guest Log: -rw-------. 1 atlas atlas       744 Jun  6 00:03 pilotlog.txt
2026-06-06 02:03:51 (10596): Guest Log: -rw-------. 1 atlas atlas    349057 Jun  6 00:03 log.50587899._007604.job.log.1
2026-06-06 02:03:51 (10596): Guest Log: -rw-------. 1 atlas atlas       357 Jun  6 00:03 output.list
2026-06-06 02:03:51 (10596): Guest Log: -rw-r--r--. 1 atlas atlas       410 Jun  6 00:03 runtime_log
2026-06-06 02:03:51 (10596): Guest Log: -rw-------. 1 atlas atlas    655360 Jun  6 00:03 result.tar.gz
2026-06-06 02:03:51 (10596): Guest Log: -rw-r--r--. 1 atlas atlas      8382 Jun  6 00:03 runtime_log.err
2026-06-06 02:03:51 (10596): Guest Log: -rw-------. 1 atlas atlas       656 Jun  6 00:03 1f116c96cdcc.diag
2026-06-06 02:03:51 (10596): Guest Log: Looking for outputfile HITS.50587899._007604.pool.root.1
2026-06-06 02:03:51 (10596): Guest Log: HITS file was successfully produced
2026-06-06 02:03:51 (10596): Guest Log: -rw-------. 1 atlas atlas 143332112 Jun  6 00:02 /home/atlas/RunAtlas/HITS.50587899._007604.pool.root.1
2026-06-06 02:03:52 (10596): Guest Log: Successfully finished the ATLAS job!
2026-06-06 02:03:52 (10596): Guest Log: Copying the results back to the shared directory!
2026-06-06 02:03:52 (10596): Guest Log:  *** Contents of shared directory: ***
2026-06-06 02:03:52 (10596): Guest Log: total 330112
2026-06-06 02:03:52 (10596): Guest Log: -rwxrwxrwx. 1 root root 193292061 Jun  5 22:57 ATLAS.root_0
2026-06-06 02:03:52 (10596): Guest Log: -rwxrwxrwx. 1 root root 143332112 Jun  6  2026 HITS.pool.root.1
2026-06-06 02:03:52 (10596): Guest Log: -rwxrwxrwx. 1 root root      9387 Jun  5 22:57 init_data.xml
2026-06-06 02:03:52 (10596): Guest Log: -rwxrwxrwx. 1 root root    719741 Jun  5 21:36 input.tar.gz
2026-06-06 02:03:52 (10596): Guest Log: -rwxrwxrwx. 1 root root    655360 Jun  6  2026 result.tar.gz
2026-06-06 02:03:52 (10596): Guest Log: -rwxrwxrwx. 1 root root     15665 Jun  5 21:36 start_atlas.sh
2026-06-06 02:03:52 (10596): Guest Log:  *** Success! Shutting down the machine. ***
2026-06-06 02:03:52 (10596): VM Completion File Detected.
2026-06-06 02:03:52 (10596): Powering off VM.
2026-06-06 02:03:53 (10596): Successfully stopped VM.
2026-06-06 02:03:53 (10596): Deregistering VM. (boinc_152e6126e012ee0e, slot#7)
2026-06-06 02:03:53 (10596): Removing network bandwidth throttle group from VM.
2026-06-06 02:03:54 (10596): Removing VM from VirtualBox.
2026-06-06 02:03:59 (10596): called boinc_finish(0)

</stderr_txt>
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