Stderr output

<core_client_version>7.22.2</core_client_version>
<![CDATA[
<stderr_txt>
2026-06-05 19:10:45 (6436): vboxwrapper version 26210
2026-06-05 19:10:45 (6436): BOINC client version: 7.22.2
2026-06-05 19:10:46 (6436): Detected: VirtualBox VboxManage Interface (Version: 6.1.34)
2026-06-05 19:10:46 (6436): Successfully copied 'init_data.xml' to the shared directory.
2026-06-05 19:10:46 (6436): Create VM. (boinc_d9b39bc328fb49b3, slot#16)
2026-06-05 19:10:47 (6436): Setting Memory Size for VM. (4800MB)
2026-06-05 19:10:47 (6436): Setting CPU Count for VM. (8)
2026-06-05 19:10:47 (6436): Setting Chipset Options for VM.
2026-06-05 19:10:47 (6436): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-06-05 19:10:48 (6436): Setting Boot Options for VM.
2026-06-05 19:10:48 (6436): Setting Network Configuration for NAT. (Driver: virtio)
2026-06-05 19:10:48 (6436): Enabling VM Network Access.
2026-06-05 19:10:49 (6436): Disabling USB Support for VM.
2026-06-05 19:10:49 (6436): Disabling COM Port Support for VM.
2026-06-05 19:10:49 (6436): Disabling LPT Port Support for VM.
2026-06-05 19:10:49 (6436): Disabling Audio Support for VM.
2026-06-05 19:10:50 (6436): Disabling Clipboard Support for VM.
2026-06-05 19:10:50 (6436): Disabling Drag and Drop Support for VM.
2026-06-05 19:10:50 (6436): Adding storage controller(s) to VM.
2026-06-05 19:10:50 (6436): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-06-05 19:10:51 (6436): Adding VirtualBox Guest Additions to VM.
2026-06-05 19:10:51 (6436): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-06-05 19:10:51 (6436): forwarding host port 61822 to guest port 80
2026-06-05 19:10:52 (6436): Enabling remote desktop for VM.
2026-06-05 19:10:52 (6436): Required extension pack not installed, remote desktop not enabled.
2026-06-05 19:10:52 (6436): Enabling shared directory for VM.
2026-06-05 19:10:52 (6436): Starting VM using VBoxManage interface. (boinc_d9b39bc328fb49b3, slot#16)
2026-06-05 19:10:56 (6436): Successfully started VM. (PID = '9572')
2026-06-05 19:10:56 (6436): Reporting VM Process ID to BOINC.
2026-06-05 19:10:56 (6436): Guest Log: BIOS: VirtualBox 6.1.34
2026-06-05 19:10:56 (6436): Guest Log: CPUID EDX: 0x178bfbff
2026-06-05 19:10:56 (6436): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-06-05 19:10:56 (6436): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-06-05 19:10:56 (6436): VM state change detected. (old = 'poweredoff', new = 'running')
2026-06-05 19:10:56 (6436): Detected: Web Application Enabled (http://localhost:61822)
2026-06-05 19:10:56 (6436): Preference change detected
2026-06-05 19:10:56 (6436): Setting CPU throttle for VM. (100%)
2026-06-05 19:10:56 (6436): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-06-05 19:10:58 (6436): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-06-05 19:10:58 (6436): Guest Log: BIOS: Booting from Hard Disk...
2026-06-05 19:11:01 (6436): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-06-05 19:11:01 (6436): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-06-05 19:11:01 (6436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-06-05 19:11:01 (6436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-06-05 19:11:01 (6436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-06-05 19:11:01 (6436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-06-05 19:11:01 (6436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-06-05 19:11:01 (6436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-06-05 19:11:01 (6436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-06-05 19:11:01 (6436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-06-05 19:11:01 (6436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-06-05 19:11:01 (6436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-06-05 19:11:01 (6436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-06-05 19:11:01 (6436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-06-05 19:11:01 (6436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-06-05 19:11:01 (6436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-06-05 19:11:01 (6436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-06-05 19:11:01 (6436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-06-05 19:11:01 (6436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-06-05 19:11:01 (6436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-06-05 19:11:01 (6436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-06-05 19:11:01 (6436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-06-05 19:11:01 (6436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-06-05 19:11:01 (6436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-06-05 19:11:01 (6436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-06-05 19:11:01 (6436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-06-05 19:11:01 (6436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-06-05 19:11:01 (6436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-06-05 19:11:01 (6436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-06-05 19:11:01 (6436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-06-05 19:11:01 (6436): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-06-05 19:11:01 (6436): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-06-05 19:11:06 (6436): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-06-05 19:11:06 (6436): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-06-05 19:11:11 (6436): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-06-05 19:11:11 (6436): Guest Log: 00:00:00.000129 main     Log opened 2026-06-05T19:11:10.278630000Z
2026-06-05 19:11:11 (6436): Guest Log: 00:00:00.000194 main     OS Product: Linux
2026-06-05 19:11:11 (6436): Guest Log: 00:00:00.000212 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-06-05 19:11:11 (6436): Guest Log: 00:00:00.000225 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-06-05 19:11:11 (6436): Guest Log: 00:00:00.000239 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-06-05 19:11:11 (6436): Guest Log: 00:00:00.000239 main     Process ID: 1370
2026-06-05 19:11:11 (6436): Guest Log: 00:00:00.000239 main     Package type: LINUX_64BITS_GENERIC
2026-06-05 19:11:11 (6436): Guest Log: 00:00:00.000885 main     5.2.32 r132073 started. Verbose level = 0
2026-06-05 19:11:12 (6436): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-06-05 19:11:12 (6436): Guest Log: [INFO] Mounting shared directory
2026-06-05 19:11:12 (6436): Guest Log: [INFO] Checking for init_data.xml
2026-06-05 19:11:17 (6436): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-06-05 19:11:17 (6436): Guest Log: [INFO] Detected branch: prod
2026-06-05 19:11:17 (6436): Guest Log: This is the prod version of the ATLAS job wrapper
2026-06-05 19:11:17 (6436): Guest Log: Copying input files
2026-06-05 19:11:18 (6436): Guest Log: Copied input files into RunAtlas.
2026-06-05 19:11:18 (6436): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-06-05 19:11:18 (6436): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-06-05 19:11:18 (6436): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-06-05 19:11:18 (6436): Guest Log: Further information can be found at the LHC@home message board.
2026-06-05 19:11:21 (6436): Guest Log: 00:00:10.004299 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 191 182 259 000ns (GuestNow=1 780 679 479 098 742 000 ns GuestLast=1 780 686 670 281 001 000 ns fSetTimeLastLoop=true )
2026-06-05 19:11:26 (6436): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-06-05 19:11:26 (6436): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-06-05 19:11:26 (6436): Guest Log: 2.6.3.0 1649 0 29956 160186 4 1 3117657 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-06-05 19:11:28 (6436): Guest Log: copied the webapp to /var/www
2026-06-05 19:11:28 (6436): Guest Log: ATHENA_PROC_NUMBER=8
2026-06-05 19:11:28 (6436): Guest Log: ATHENA_CORE_NUMBER=8
2026-06-05 19:11:28 (6436): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-06-05 19:11:28 (6436): Guest Log:  *** Starting ATLAS job. (PandaID=7167402041 taskID=50588407) ***
2026-06-05 19:54:19 (6436): Preference change detected
2026-06-05 19:54:19 (6436): Setting CPU throttle for VM. (100%)
2026-06-05 19:54:20 (6436): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-06-05 20:11:09 (6436): VM state change detected. (old = 'running', new = 'paused')
2026-06-05 20:47:24 (6436): VM state change detected. (old = 'paused', new = 'running')
2026-06-05 20:47:33 (6436): Guest Log: 01:00:05.317458 timesync vgsvcTimeSyncWorker: Radical host time change: 2 179 358 000 000ns (HostNow=1 780 685 242 968 000 000 ns HostLast=1 780 683 063 610 000 000 ns)
2026-06-05 20:47:43 (6436): Guest Log: 01:00:15.318520 timesync vgsvcTimeSyncWorker: Radical guest time change: 2 178 557 502 000ns (GuestNow=1 780 685 252 969 251 000 ns GuestLast=1 780 683 074 411 749 000 ns fSetTimeLastLoop=true )
2026-06-05 20:57:48 (6436): Guest Log:  *** Job finished ***
2026-06-05 20:57:48 (6436): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-06-05 20:57:48 (6436): Guest Log: 2026-06-05 18:57:26,185 | INFO     | all workflow threads have been joined
2026-06-05 20:57:48 (6436): Guest Log: 2026-06-05 18:57:26,185 | INFO     | end of generic workflow (traces error code: 0)
2026-06-05 20:57:48 (6436): Guest Log: 2026-06-05 18:57:26,185 | INFO     | traces error code: 0
2026-06-05 20:57:48 (6436): Guest Log: 2026-06-05 18:57:26,185 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-06-05 20:57:48 (6436): Guest Log: 2026-06-05 18:57:37,917 | INFO     | PID=6078 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-06-05 20:57:48 (6436): Guest Log: 2026-06-05 18:57:37,918 | INFO     | found 0 job(s) in 20 queues
2026-06-05 20:57:48 (6436): Guest Log: 2026-06-05 18:57:37,918 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-06-05 20:57:48 (6436): Guest Log: 2026-06-05 18:57:37,918 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-06-05 20:57:48 (6436): Guest Log: 2026-06-05 18:57:37,918 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-06-05 20:57:48 (6436): Guest Log: 2026-06-05 18:57:37,918 | INFO     | [monitor] control thread has ended
2026-06-05 20:57:48 (6436): Guest Log: 2026-06-05 18:57:38,042 [wrapper] ==== pilot stdout END ====
2026-06-05 20:57:48 (6436): Guest Log: 2026-06-05 18:57:38,047 [wrapper] ==== wrapper stdout RESUME ====
2026-06-05 20:57:48 (6436): Guest Log: 2026-06-05 18:57:38,052 [wrapper] pilotpid: 6078
2026-06-05 20:57:48 (6436): Guest Log: 2026-06-05 18:57:38,057 [wrapper] Pilot exit status: 0
2026-06-05 20:57:48 (6436): Guest Log: 2026-06-05 18:57:38,106 [wrapper] pandaids: 7167402041
2026-06-05 20:57:48 (6436): Guest Log: 2026-06-05 18:57:38,132 [wrapper] cleanup supervisor_pilot 15947 6079
2026-06-05 20:57:48 (6436): Guest Log: 2026-06-05 18:57:38,137 [wrapper] Test setup, not cleaning
2026-06-05 20:57:48 (6436): Guest Log: 2026-06-05 18:57:38,143 [wrapper] apfmon messages muted
2026-06-05 20:57:48 (6436): Guest Log: 2026-06-05 18:57:38,148 [wrapper] ==== wrapper stdout END ====
2026-06-05 20:57:48 (6436): Guest Log: 2026-06-05 18:57:38,152 [wrapper] ==== wrapper stderr END ====
2026-06-05 20:57:48 (6436): Guest Log:  *** Error codes and diagnostics ***
2026-06-05 20:57:48 (6436): Guest Log:     "exeErrorCode": 0,
2026-06-05 20:57:48 (6436): Guest Log:     "pilotErrorCode": 0,
2026-06-05 20:57:48 (6436): Guest Log:  *** Listing of results directory ***
2026-06-05 20:57:48 (6436): Guest Log: total 151976
2026-06-05 20:57:48 (6436): Guest Log: -rw-r--r--. 1 atlas atlas    706490 Jun  5 12:40 pilot3.tar.gz
2026-06-05 20:57:48 (6436): Guest Log: -rw-r--r--. 1 atlas atlas      5630 Jun  5 12:43 queuedata.json
2026-06-05 20:57:48 (6436): Guest Log: -rwx------. 1 atlas atlas     36281 Jun  5 12:43 runpilot2-wrapper.sh
2026-06-05 20:57:48 (6436): Guest Log: -rwxr-xr-x. 1 atlas atlas      9389 Jun  5 17:11 init_data.xml
2026-06-05 20:57:48 (6436): Guest Log: -rwxr-xr-x. 1 atlas atlas    719731 Jun  5 17:11 input.tar.gz
2026-06-05 20:57:48 (6436): Guest Log: -rwxr-xr-x. 1 atlas atlas     15665 Jun  5 17:11 start_atlas.sh
2026-06-05 20:57:48 (6436): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  5 17:11 EVNT.50588404._000264.pool.root.1 -> /data/./ATLAS.root_0
2026-06-05 20:57:48 (6436): Guest Log: -rw-r--r--. 1 atlas atlas      2464 Jun  5 17:11 pandaJob.out
2026-06-05 20:57:48 (6436): Guest Log: -rw-------. 1 atlas atlas    995537 Jun  5 17:11 agis_schedconf.cvmfs.json
2026-06-05 20:57:48 (6436): Guest Log: -rw-------. 1 atlas atlas         0 Jun  5 17:11 agis_ddmendpoints.agis.ALL.json
2026-06-05 20:57:48 (6436): Guest Log: -rw-------. 1 atlas atlas   1249991 Jun  5 17:11 cric_ddmendpoints.json
2026-06-05 20:57:48 (6436): Guest Log: -rw-------. 1 atlas atlas       431 Jun  5 17:12 workernode_map.json
2026-06-05 20:57:48 (6436): Guest Log: drwx------. 5 atlas atlas      4096 Jun  5 17:12 pilot3
2026-06-05 20:57:48 (6436): Guest Log: -rw-------. 1 atlas atlas 150336547 Jun  5 18:56 HITS.50588407._006740.pool.root.1
2026-06-05 20:57:48 (6436): Guest Log: -rw-------. 1 atlas atlas      1026 Jun  5 18:56 memory_monitor_summary.json
2026-06-05 20:57:48 (6436): Guest Log: -rw-------. 1 atlas atlas    307829 Jun  5 18:57 log.50588407._006740.job.log.tgz.1
2026-06-05 20:57:48 (6436): Guest Log: -rw-------. 1 atlas atlas      6406 Jun  5 18:57 heartbeat_new.json
2026-06-05 20:57:48 (6436): Guest Log: -rw-------. 1 atlas atlas      6297 Jun  5 18:57 heartbeat.json
2026-06-05 20:57:48 (6436): Guest Log: -rw-------. 1 atlas atlas       744 Jun  5 18:57 pilotlog.txt
2026-06-05 20:57:48 (6436): Guest Log: -rw-------. 1 atlas atlas        97 Jun  5 18:57 pilot_heartbeat.json
2026-06-05 20:57:48 (6436): Guest Log: -rw-------. 1 atlas atlas    409954 Jun  5 18:57 log.50588407._006740.job.log.1
2026-06-05 20:57:48 (6436): Guest Log: -rw-------. 1 atlas atlas       357 Jun  5 18:57 output.list
2026-06-05 20:57:48 (6436): Guest Log: -rw-r--r--. 1 atlas atlas       410 Jun  5 18:57 runtime_log
2026-06-05 20:57:48 (6436): Guest Log: -rw-------. 1 atlas atlas    737280 Jun  5 18:57 result.tar.gz
2026-06-05 20:57:48 (6436): Guest Log: -rw-r--r--. 1 atlas atlas      8382 Jun  5 18:57 runtime_log.err
2026-06-05 20:57:48 (6436): Guest Log: -rw-------. 1 atlas atlas       656 Jun  5 18:57 c463418e8e89.diag
2026-06-05 20:57:48 (6436): Guest Log: Looking for outputfile HITS.50588407._006740.pool.root.1
2026-06-05 20:57:48 (6436): Guest Log: HITS file was successfully produced
2026-06-05 20:57:48 (6436): Guest Log: -rw-------. 1 atlas atlas 150336547 Jun  5 18:56 /home/atlas/RunAtlas/HITS.50588407._006740.pool.root.1
2026-06-05 20:57:48 (6436): Guest Log: Successfully finished the ATLAS job!
2026-06-05 20:57:48 (6436): Guest Log: Copying the results back to the shared directory!
2026-06-05 20:57:49 (6436): Guest Log:  *** Contents of shared directory: ***
2026-06-05 20:57:49 (6436): Guest Log: total 342428
2026-06-05 20:57:49 (6436): Guest Log: -rwxrwxrwx. 1 root root 198819440 Jun  5 17:10 ATLAS.root_0
2026-06-05 20:57:49 (6436): Guest Log: -rwxrwxrwx. 1 root root 150336547 Jun  5  2026 HITS.pool.root.1
2026-06-05 20:57:49 (6436): Guest Log: -rwxrwxrwx. 1 root root      9389 Jun  5 17:10 init_data.xml
2026-06-05 20:57:49 (6436): Guest Log: -rwxrwxrwx. 1 root root    719731 Jun  5 14:37 input.tar.gz
2026-06-05 20:57:49 (6436): Guest Log: -rwxrwxrwx. 1 root root    737280 Jun  5  2026 result.tar.gz
2026-06-05 20:57:49 (6436): Guest Log: -rwxrwxrwx. 1 root root     15665 Jun  5 14:37 start_atlas.sh
2026-06-05 20:57:49 (6436): Guest Log:  *** Success! Shutting down the machine. ***
2026-06-05 20:57:49 (6436): VM Completion File Detected.
2026-06-05 20:57:49 (6436): Powering off VM.
2026-06-05 20:57:50 (6436): Successfully stopped VM.
2026-06-05 20:57:50 (6436): Deregistering VM. (boinc_d9b39bc328fb49b3, slot#16)
2026-06-05 20:57:50 (6436): Removing network bandwidth throttle group from VM.
2026-06-05 20:57:51 (6436): Removing VM from VirtualBox.
2026-06-05 20:57:56 (6436): called boinc_finish(0)

</stderr_txt>
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