Stderr output

<core_client_version>7.22.2</core_client_version>
<![CDATA[
<stderr_txt>
2026-06-05 13:37:58 (8684): vboxwrapper version 26210
2026-06-05 13:37:58 (8684): BOINC client version: 7.22.2
2026-06-05 13:37:59 (8684): Detected: VirtualBox VboxManage Interface (Version: 6.1.34)
2026-06-05 13:37:59 (8684): Successfully copied 'init_data.xml' to the shared directory.
2026-06-05 13:37:59 (8684): Create VM. (boinc_3f4029efe00870e7, slot#2)
2026-06-05 13:38:00 (8684): Setting Memory Size for VM. (4800MB)
2026-06-05 13:38:00 (8684): Setting CPU Count for VM. (8)
2026-06-05 13:38:00 (8684): Setting Chipset Options for VM.
2026-06-05 13:38:00 (8684): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-06-05 13:38:01 (8684): Setting Boot Options for VM.
2026-06-05 13:38:01 (8684): Setting Network Configuration for NAT. (Driver: virtio)
2026-06-05 13:38:01 (8684): Enabling VM Network Access.
2026-06-05 13:38:02 (8684): Disabling USB Support for VM.
2026-06-05 13:38:02 (8684): Disabling COM Port Support for VM.
2026-06-05 13:38:02 (8684): Disabling LPT Port Support for VM.
2026-06-05 13:38:02 (8684): Disabling Audio Support for VM.
2026-06-05 13:38:03 (8684): Disabling Clipboard Support for VM.
2026-06-05 13:38:03 (8684): Disabling Drag and Drop Support for VM.
2026-06-05 13:38:03 (8684): Adding storage controller(s) to VM.
2026-06-05 13:38:03 (8684): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-06-05 13:38:04 (8684): Adding VirtualBox Guest Additions to VM.
2026-06-05 13:38:05 (8684): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-06-05 13:38:05 (8684): forwarding host port 60098 to guest port 80
2026-06-05 13:38:05 (8684): Enabling remote desktop for VM.
2026-06-05 13:38:05 (8684): Required extension pack not installed, remote desktop not enabled.
2026-06-05 13:38:05 (8684): Enabling shared directory for VM.
2026-06-05 13:38:06 (8684): Starting VM using VBoxManage interface. (boinc_3f4029efe00870e7, slot#2)
2026-06-05 13:38:10 (8684): Successfully started VM. (PID = '14632')
2026-06-05 13:38:10 (8684): Reporting VM Process ID to BOINC.
2026-06-05 13:38:10 (8684): Guest Log: BIOS: VirtualBox 6.1.34
2026-06-05 13:38:10 (8684): Guest Log: CPUID EDX: 0x178bfbff
2026-06-05 13:38:10 (8684): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-06-05 13:38:10 (8684): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-06-05 13:38:10 (8684): VM state change detected. (old = 'poweredoff', new = 'running')
2026-06-05 13:38:10 (8684): Detected: Web Application Enabled (http://localhost:60098)
2026-06-05 13:38:10 (8684): Preference change detected
2026-06-05 13:38:10 (8684): Setting CPU throttle for VM. (100%)
2026-06-05 13:38:10 (8684): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-06-05 13:38:12 (8684): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-06-05 13:38:12 (8684): Guest Log: BIOS: Booting from Hard Disk...
2026-06-05 13:38:15 (8684): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-06-05 13:38:15 (8684): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-06-05 13:38:15 (8684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-06-05 13:38:15 (8684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-06-05 13:38:15 (8684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-06-05 13:38:15 (8684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-06-05 13:38:15 (8684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-06-05 13:38:15 (8684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-06-05 13:38:15 (8684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-06-05 13:38:15 (8684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-06-05 13:38:15 (8684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-06-05 13:38:15 (8684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-06-05 13:38:15 (8684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-06-05 13:38:15 (8684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-06-05 13:38:15 (8684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-06-05 13:38:15 (8684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-06-05 13:38:15 (8684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-06-05 13:38:15 (8684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-06-05 13:38:15 (8684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-06-05 13:38:15 (8684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-06-05 13:38:15 (8684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-06-05 13:38:15 (8684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-06-05 13:38:15 (8684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-06-05 13:38:15 (8684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-06-05 13:38:15 (8684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-06-05 13:38:15 (8684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-06-05 13:38:15 (8684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-06-05 13:38:15 (8684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-06-05 13:38:15 (8684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-06-05 13:38:15 (8684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-06-05 13:38:15 (8684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-06-05 13:38:15 (8684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-06-05 13:40:11 (8684): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-06-05 13:40:11 (8684): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-06-05 13:40:16 (8684): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-06-05 13:40:16 (8684): Guest Log: 00:00:00.000123 main     Log opened 2026-06-05T13:40:14.592100000Z
2026-06-05 13:40:16 (8684): Guest Log: 00:00:00.000194 main     OS Product: Linux
2026-06-05 13:40:16 (8684): Guest Log: 00:00:00.000216 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-06-05 13:40:16 (8684): Guest Log: 00:00:00.000231 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-06-05 13:40:16 (8684): Guest Log: 00:00:00.000246 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-06-05 13:40:16 (8684): Guest Log: 00:00:00.000246 main     Process ID: 1371
2026-06-05 13:40:16 (8684): Guest Log: 00:00:00.000247 main     Package type: LINUX_64BITS_GENERIC
2026-06-05 13:40:16 (8684): Guest Log: 00:00:00.000862 main     5.2.32 r132073 started. Verbose level = 0
2026-06-05 13:40:16 (8684): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-06-05 13:40:16 (8684): Guest Log: [INFO] Mounting shared directory
2026-06-05 13:40:16 (8684): Guest Log: [INFO] Checking for init_data.xml
2026-06-05 13:40:20 (8684): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-06-05 13:40:20 (8684): Guest Log: [INFO] Detected branch: prod
2026-06-05 13:40:20 (8684): Guest Log: This is the prod version of the ATLAS job wrapper
2026-06-05 13:40:20 (8684): Guest Log: Copying input files
2026-06-05 13:40:21 (8684): Guest Log: Copied input files into RunAtlas.
2026-06-05 13:40:21 (8684): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-06-05 13:40:21 (8684): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-06-05 13:40:21 (8684): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-06-05 13:40:21 (8684): Guest Log: Further information can be found at the LHC@home message board.
2026-06-05 13:40:26 (8684): Guest Log: 00:00:10.003098 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 240 588 200 000ns (GuestNow=1 780 659 574 005 896 000 ns GuestLast=1 780 666 814 594 096 000 ns fSetTimeLastLoop=true )
2026-06-05 13:40:31 (8684): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-06-05 13:40:32 (8684): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-06-05 13:40:32 (8684): Guest Log: 2.6.3.0 1645 0 30196 160179 4 1 3117657 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-06-05 13:40:32 (8684): Guest Log: copied the webapp to /var/www
2026-06-05 13:40:32 (8684): Guest Log: ATHENA_PROC_NUMBER=8
2026-06-05 13:40:32 (8684): Guest Log: ATHENA_CORE_NUMBER=8
2026-06-05 13:40:33 (8684): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-06-05 13:40:33 (8684): Guest Log:  *** Starting ATLAS job. (PandaID=7163286363 taskID=50587829) ***
2026-06-05 14:38:43 (8684): VM state change detected. (old = 'running', new = 'paused')
2026-06-05 15:54:39 (8684): Preference change detected
2026-06-05 15:54:39 (8684): Setting CPU throttle for VM. (100%)
2026-06-05 15:54:40 (8684): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-06-05 15:54:40 (8684): Guest Log: 00:58:28.749035 timesync vgsvcTimeSyncWorker: Radical host time change: 4 561 775 000 000ns (HostNow=1 780 667 630 045 000 000 ns HostLast=1 780 663 068 270 000 000 ns)
2026-06-05 15:54:40 (8684): VM state change detected. (old = 'paused', new = 'running')
2026-06-05 15:54:50 (8684): Guest Log: 00:58:38.750137 timesync vgsvcTimeSyncWorker: Radical guest time change: 4 567 294 469 000ns (GuestNow=1 780 667 640 046 233 000 ns GuestLast=1 780 663 072 751 764 000 ns fSetTimeLastLoop=true )
2026-06-05 16:34:13 (8684): Status Report: Elapsed Time: '6000.000000'
2026-06-05 16:34:13 (8684): Status Report: CPU Time: '40814.078125'
2026-06-05 16:36:07 (8684): Guest Log:  *** Job finished ***
2026-06-05 16:36:07 (8684): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-06-05 16:36:07 (8684): Guest Log: 2026-06-05 14:35:09,583 | INFO     | found 0 job(s) in 20 queues
2026-06-05 16:36:07 (8684): Guest Log: 2026-06-05 14:35:09,583 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-06-05 16:36:07 (8684): Guest Log: 2026-06-05 14:35:09,583 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-06-05 16:36:07 (8684): Guest Log: 2026-06-05 14:35:10,713 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140355743524672)>', '<ExcThread(monitor, started 140354430957312)>']
2026-06-05 16:36:07 (8684): Guest Log: 2026-06-05 14:35:11,587 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-06-05 16:36:07 (8684): Guest Log: 2026-06-05 14:35:11,587 | INFO     | [monitor] control thread has ended
2026-06-05 16:36:07 (8684): Guest Log: 2026-06-05 14:35:15,756 | INFO     | all workflow threads have been joined
2026-06-05 16:36:07 (8684): Guest Log: 2026-06-05 14:35:15,756 | INFO     | end of generic workflow (traces error code: 0)
2026-06-05 16:36:07 (8684): Guest Log: 2026-06-05 14:35:15,756 | INFO     | traces error code: 0
2026-06-05 16:36:07 (8684): Guest Log: 2026-06-05 14:35:15,756 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-06-05 16:36:07 (8684): Guest Log: 2026-06-05 14:35:15,916 [wrapper] ==== pilot stdout END ====
2026-06-05 16:36:07 (8684): Guest Log: 2026-06-05 14:35:15,923 [wrapper] ==== wrapper stdout RESUME ====
2026-06-05 16:36:07 (8684): Guest Log: 2026-06-05 14:35:15,928 [wrapper] pilotpid: 6103
2026-06-05 16:36:07 (8684): Guest Log: 2026-06-05 14:35:15,934 [wrapper] Pilot exit status: 0
2026-06-05 16:36:07 (8684): Guest Log: 2026-06-05 14:35:16,764 [wrapper] pandaids: 7163286363
2026-06-05 16:36:07 (8684): Guest Log: 2026-06-05 14:35:16,802 [wrapper] cleanup supervisor_pilot 25912 6104
2026-06-05 16:36:07 (8684): Guest Log: 2026-06-05 14:35:16,814 [wrapper] Test setup, not cleaning
2026-06-05 16:36:07 (8684): Guest Log: 2026-06-05 14:35:16,821 [wrapper] apfmon messages muted
2026-06-05 16:36:07 (8684): Guest Log: 2026-06-05 14:35:16,827 [wrapper] ==== wrapper stdout END ====
2026-06-05 16:36:07 (8684): Guest Log: 2026-06-05 14:35:16,833 [wrapper] ==== wrapper stderr END ====
2026-06-05 16:36:07 (8684): Guest Log:  *** Error codes and diagnostics ***
2026-06-05 16:36:07 (8684): Guest Log:     "exeErrorCode": 0,
2026-06-05 16:36:07 (8684): Guest Log:     "pilotErrorCode": 0,
2026-06-05 16:36:07 (8684): Guest Log:  *** Listing of results directory ***
2026-06-05 16:36:07 (8684): Guest Log: total 177236
2026-06-05 16:36:07 (8684): Guest Log: -rw-r--r--. 1 atlas atlas    706490 Jun  5 08:30 pilot3.tar.gz
2026-06-05 16:36:07 (8684): Guest Log: -rw-r--r--. 1 atlas atlas      5630 Jun  5 08:54 queuedata.json
2026-06-05 16:36:07 (8684): Guest Log: -rwx------. 1 atlas atlas     36281 Jun  5 08:54 runpilot2-wrapper.sh
2026-06-05 16:36:07 (8684): Guest Log: -rwxr-xr-x. 1 atlas atlas     15665 Jun  5 11:39 start_atlas.sh
2026-06-05 16:36:07 (8684): Guest Log: -rwxr-xr-x. 1 atlas atlas    719735 Jun  5 11:39 input.tar.gz
2026-06-05 16:36:07 (8684): Guest Log: -rwxr-xr-x. 1 atlas atlas      9386 Jun  5 11:39 init_data.xml
2026-06-05 16:36:07 (8684): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  5 11:39 EVNT.50587827._000173.pool.root.1 -> /data/./ATLAS.root_0
2026-06-05 16:36:07 (8684): Guest Log: -rw-r--r--. 1 atlas atlas      2475 Jun  5 11:39 pandaJob.out
2026-06-05 16:36:07 (8684): Guest Log: -rw-------. 1 atlas atlas    995922 Jun  5 11:42 agis_schedconf.cvmfs.json
2026-06-05 16:36:07 (8684): Guest Log: -rw-------. 1 atlas atlas         0 Jun  5 11:42 agis_ddmendpoints.agis.ALL.json
2026-06-05 16:36:07 (8684): Guest Log: -rw-------. 1 atlas atlas   1249991 Jun  5 11:42 cric_ddmendpoints.json
2026-06-05 16:36:07 (8684): Guest Log: -rw-------. 1 atlas atlas       431 Jun  5 11:42 workernode_map.json
2026-06-05 16:36:07 (8684): Guest Log: drwx------. 5 atlas atlas      4096 Jun  5 11:43 pilot3
2026-06-05 16:36:07 (8684): Guest Log: -rw-------. 1 atlas atlas 175893106 Jun  5 14:34 HITS.50587829._004429.pool.root.1
2026-06-05 16:36:07 (8684): Guest Log: -rw-------. 1 atlas atlas        97 Jun  5 14:34 pilot_heartbeat.json
2026-06-05 16:36:07 (8684): Guest Log: -rw-------. 1 atlas atlas      1026 Jun  5 14:34 memory_monitor_summary.json
2026-06-05 16:36:07 (8684): Guest Log: -rw-------. 1 atlas atlas    327202 Jun  5 14:34 log.50587829._004429.job.log.tgz.1
2026-06-05 16:36:07 (8684): Guest Log: -rw-------. 1 atlas atlas      6409 Jun  5 14:34 heartbeat_new.json
2026-06-05 16:36:07 (8684): Guest Log: -rw-------. 1 atlas atlas      6300 Jun  5 14:34 heartbeat.json
2026-06-05 16:36:07 (8684): Guest Log: -rw-------. 1 atlas atlas      5058 Jun  5 14:35 pilotlog.txt
2026-06-05 16:36:07 (8684): Guest Log: -rw-------. 1 atlas atlas    546890 Jun  5 14:35 log.50587829._004429.job.log.1
2026-06-05 16:36:07 (8684): Guest Log: -rw-------. 1 atlas atlas       357 Jun  5 14:35 output.list
2026-06-05 16:36:07 (8684): Guest Log: -rw-r--r--. 1 atlas atlas       410 Jun  5 14:35 runtime_log
2026-06-05 16:36:07 (8684): Guest Log: -rw-------. 1 atlas atlas    890880 Jun  5 14:35 result.tar.gz
2026-06-05 16:36:07 (8684): Guest Log: -rw-r--r--. 1 atlas atlas      8383 Jun  5 14:35 runtime_log.err
2026-06-05 16:36:07 (8684): Guest Log: -rw-------. 1 atlas atlas       660 Jun  5 14:35 8ecc44e7f1e9.diag
2026-06-05 16:36:07 (8684): Guest Log: Looking for outputfile HITS.50587829._004429.pool.root.1
2026-06-05 16:36:07 (8684): Guest Log: HITS file was successfully produced
2026-06-05 16:36:07 (8684): Guest Log: -rw-------. 1 atlas atlas 175893106 Jun  5 14:34 /home/atlas/RunAtlas/HITS.50587829._004429.pool.root.1
2026-06-05 16:36:08 (8684): Guest Log: Successfully finished the ATLAS job!
2026-06-05 16:36:08 (8684): Guest Log: Copying the results back to the shared directory!
2026-06-05 16:36:08 (8684): Guest Log:  *** Contents of shared directory: ***
2026-06-05 16:36:08 (8684): Guest Log: total 372328
2026-06-05 16:36:08 (8684): Guest Log: -rwxrwxrwx. 1 root root 203724016 Jun  5 11:37 ATLAS.root_0
2026-06-05 16:36:08 (8684): Guest Log: -rwxrwxrwx. 1 root root 175893106 Jun  5  2026 HITS.pool.root.1
2026-06-05 16:36:08 (8684): Guest Log: -rwxrwxrwx. 1 root root      9386 Jun  5 11:37 init_data.xml
2026-06-05 16:36:08 (8684): Guest Log: -rwxrwxrwx. 1 root root    719735 Jun  5 09:53 input.tar.gz
2026-06-05 16:36:08 (8684): Guest Log: -rwxrwxrwx. 1 root root    890880 Jun  5  2026 result.tar.gz
2026-06-05 16:36:08 (8684): Guest Log: -rwxrwxrwx. 1 root root     15665 Jun  5 09:53 start_atlas.sh
2026-06-05 16:36:08 (8684): Guest Log:  *** Success! Shutting down the machine. ***
2026-06-05 16:36:08 (8684): VM Completion File Detected.
2026-06-05 16:36:08 (8684): Powering off VM.
2026-06-05 16:36:09 (8684): Successfully stopped VM.
2026-06-05 16:36:09 (8684): Deregistering VM. (boinc_3f4029efe00870e7, slot#2)
2026-06-05 16:36:09 (8684): Removing network bandwidth throttle group from VM.
2026-06-05 16:36:09 (8684): Removing VM from VirtualBox.
2026-06-05 16:36:14 (8684): called boinc_finish(0)

</stderr_txt>
]]>

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