Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2026-06-05 01:29:51 (19308): vboxwrapper version 26210
2026-06-05 01:29:51 (19308): BOINC client version: 7.24.1
2026-06-05 01:29:52 (19308): Detected: VirtualBox VboxManage Interface (Version: 7.0.18)
2026-06-05 01:29:52 (19308): Successfully copied 'init_data.xml' to the shared directory.
2026-06-05 01:29:53 (19308): Create VM. (boinc_8ad849fb981c3d38, slot#19)
2026-06-05 01:29:53 (19308): Setting Memory Size for VM. (4800MB)
2026-06-05 01:29:53 (19308): Setting CPU Count for VM. (8)
2026-06-05 01:29:54 (19308): Setting Chipset Options for VM.
2026-06-05 01:29:54 (19308): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-06-05 01:29:54 (19308): Setting Boot Options for VM.
2026-06-05 01:29:55 (19308): Setting Network Configuration for NAT. (Driver: virtio)
2026-06-05 01:29:55 (19308): Enabling VM Network Access.
2026-06-05 01:29:55 (19308): Disabling USB Support for VM.
2026-06-05 01:29:55 (19308): Disabling COM Port Support for VM.
2026-06-05 01:29:56 (19308): Disabling LPT Port Support for VM.
2026-06-05 01:29:56 (19308): Disabling Audio Support for VM.
2026-06-05 01:29:56 (19308): Disabling Clipboard Support for VM.
2026-06-05 01:29:57 (19308): Disabling Drag and Drop Support for VM.
2026-06-05 01:29:57 (19308): Adding storage controller(s) to VM.
2026-06-05 01:29:57 (19308): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-06-05 01:29:58 (19308): Adding VirtualBox Guest Additions to VM.
2026-06-05 01:29:58 (19308): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-06-05 01:29:58 (19308): forwarding host port 49806 to guest port 80
2026-06-05 01:29:58 (19308): Enabling remote desktop for VM.
2026-06-05 01:29:59 (19308): Required extension pack not installed, remote desktop not enabled.
2026-06-05 01:29:59 (19308): Enabling shared directory for VM.
2026-06-05 01:29:59 (19308): Starting VM using VBoxManage interface. (boinc_8ad849fb981c3d38, slot#19)
2026-06-05 01:30:07 (19308): Successfully started VM. (PID = '16676')
2026-06-05 01:30:07 (19308): Reporting VM Process ID to BOINC.
2026-06-05 01:30:07 (19308): Guest Log: BIOS: VirtualBox 7.0.18
2026-06-05 01:30:07 (19308): Guest Log: CPUID EDX: 0x178bfbff
2026-06-05 01:30:07 (19308): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-06-05 01:30:07 (19308): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-06-05 01:30:07 (19308): VM state change detected. (old = 'poweredoff', new = 'running')
2026-06-05 01:30:07 (19308): Detected: Web Application Enabled (http://localhost:49806)
2026-06-05 01:30:07 (19308): Preference change detected
2026-06-05 01:30:07 (19308): Setting CPU throttle for VM. (100%)
2026-06-05 01:30:08 (19308): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-06-05 01:30:09 (19308): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-06-05 01:30:09 (19308): Guest Log: BIOS: Booting from Hard Disk...
2026-06-05 01:30:13 (19308): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-06-05 01:30:13 (19308): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-06-05 01:30:13 (19308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-06-05 01:30:13 (19308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-06-05 01:30:13 (19308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-06-05 01:30:13 (19308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-06-05 01:30:13 (19308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-06-05 01:30:13 (19308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-06-05 01:30:13 (19308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-06-05 01:30:13 (19308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-06-05 01:30:13 (19308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-06-05 01:30:13 (19308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-06-05 01:30:13 (19308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-06-05 01:30:14 (19308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-06-05 01:30:14 (19308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-06-05 01:30:14 (19308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-06-05 01:30:14 (19308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-06-05 01:30:14 (19308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-06-05 01:30:14 (19308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-06-05 01:30:14 (19308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-06-05 01:30:14 (19308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-06-05 01:30:14 (19308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-06-05 01:30:14 (19308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-06-05 01:30:14 (19308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-06-05 01:30:14 (19308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-06-05 01:30:14 (19308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-06-05 01:30:14 (19308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-06-05 01:30:14 (19308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-06-05 01:30:14 (19308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-06-05 01:30:14 (19308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-06-05 01:30:14 (19308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-06-05 01:30:14 (19308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-06-05 01:30:19 (19308): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-06-05 01:30:19 (19308): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-06-05 01:30:32 (19308): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-06-05 01:30:32 (19308): Guest Log: 00:00:00.000268 main     Log opened 2026-06-05T01:30:30.094352000Z
2026-06-05 01:30:32 (19308): Guest Log: 00:00:00.000467 main     OS Product: Linux
2026-06-05 01:30:32 (19308): Guest Log: 00:00:00.000556 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-06-05 01:30:32 (19308): Guest Log: 00:00:00.000636 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-06-05 01:30:32 (19308): Guest Log: 00:00:00.000716 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-06-05 01:30:32 (19308): Guest Log: 00:00:00.000718 main     Process ID: 1373
2026-06-05 01:30:32 (19308): Guest Log: 00:00:00.000720 main     Package type: LINUX_64BITS_GENERIC
2026-06-05 01:30:32 (19308): Guest Log: 00:00:00.002612 main     5.2.32 r132073 started. Verbose level = 0
2026-06-05 01:30:32 (19308): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-06-05 01:30:32 (19308): Guest Log: [INFO] Mounting shared directory
2026-06-05 01:30:32 (19308): Guest Log: [INFO] Checking for init_data.xml
2026-06-05 01:30:37 (19308): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-06-05 01:30:37 (19308): Guest Log: [INFO] Detected branch: prod
2026-06-05 01:30:38 (19308): Guest Log: This is the prod version of the ATLAS job wrapper
2026-06-05 01:30:38 (19308): Guest Log: Copying input files
2026-06-05 01:30:42 (19308): Guest Log: 00:00:10.011233 timesync vgsvcTimeSyncWorker: Radical guest time change: 25 211 979 774 000ns (GuestNow=1 780 648 242 078 968 000 ns GuestLast=1 780 623 030 099 194 000 ns fSetTimeLastLoop=true )
2026-06-05 01:30:45 (19308): Guest Log: Copied input files into RunAtlas.
2026-06-05 01:30:45 (19308): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-06-05 01:30:45 (19308): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-06-05 01:30:45 (19308): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-06-05 01:30:45 (19308): Guest Log: Further information can be found at the LHC@home message board.
2026-06-05 01:30:55 (19308): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-06-05 01:30:56 (19308): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-06-05 01:30:56 (19308): Guest Log: 2.6.3.0 1652 0 32196 160173 3 1 3117654 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-06-05 01:30:57 (19308): Guest Log: copied the webapp to /var/www
2026-06-05 01:30:57 (19308): Guest Log: ATHENA_PROC_NUMBER=8
2026-06-05 01:30:57 (19308): Guest Log: ATHENA_CORE_NUMBER=8
2026-06-05 01:30:57 (19308): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-06-05 01:30:58 (19308): Guest Log:  *** Starting ATLAS job. (PandaID=7163062183 taskID=50591392) ***
2026-06-05 01:54:38 (19308): Guest Log:  *** Job finished ***
2026-06-05 01:54:38 (19308): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-06-05 01:54:38 (19308): Guest Log: 2026-06-05 08:50:55,619 | INFO     | end of generic workflow (traces error code: 0)
2026-06-05 01:54:38 (19308): Guest Log: 2026-06-05 08:50:55,619 | INFO     | traces error code: 0
2026-06-05 01:54:38 (19308): Guest Log: 2026-06-05 08:50:55,620 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-06-05 01:54:38 (19308): Guest Log: 2026-06-05 08:50:55,760 [wrapper] ==== pilot stdout END ====
2026-06-05 01:54:38 (19308): Guest Log: 2026-06-05 08:50:55,769 [wrapper] ==== wrapper stdout RESUME ====
2026-06-05 01:54:38 (19308): Guest Log: 2026-06-05 08:50:55,777 [wrapper] pilotpid: 6133
2026-06-05 01:54:38 (19308): Guest Log: 2026-06-05 08:50:55,785 [wrapper] Pilot exit status: 0
2026-06-05 01:54:38 (19308): Guest Log: ./runpilot2-wrapper.sh: line 625: /usr/bin/stat: Input/output error
2026-06-05 01:54:38 (19308): Guest Log: 2026-06-05 08:51:45,737 [wrapper] CURRENT_TIME: 1780649292
2026-06-05 01:54:38 (19308): Guest Log: 2026-06-05 08:51:45,745 [wrapper] LAST_MODIFICATION: 
2026-06-05 01:54:38 (19308): Guest Log: 2026-06-05 08:51:45,753 [wrapper] TIME_DIFF: 1780649292
2026-06-05 01:54:38 (19308): Guest Log: 2026-06-05 08:51:45,763 [wrapper] pilotlog.txt has not been updated in the last hour. Sending SIGINT (2) signal to the pilot process.
2026-06-05 01:54:38 (19308): Guest Log: 2026-06-05 08:51:45,771 [wrapper] pilotlog.txt has not been updated in the last hour. Sending SIGINT (2) signal to the pilot process.
2026-06-05 01:54:38 (19308): Guest Log: ./runpilot2-wrapper.sh: line 1017: /usr/bin/xargs: Input/output error
2026-06-05 01:54:38 (19308): Guest Log: 2026-06-05 08:54:37,081 [wrapper] pandaids: 
2026-06-05 01:54:38 (19308): Guest Log: 2026-06-05 08:54:37,158 [wrapper] cleanup supervisor_pilot 15361 6134
2026-06-05 01:54:38 (19308): Guest Log: 2026-06-05 08:54:37,166 [wrapper] Test setup, not cleaning
2026-06-05 01:54:38 (19308): Guest Log: 2026-06-05 08:54:37,176 [wrapper] apfmon messages muted
2026-06-05 01:54:38 (19308): Guest Log: 2026-06-05 08:54:37,183 [wrapper] ==== wrapper stdout END ====
2026-06-05 01:54:38 (19308): Guest Log: 2026-06-05 08:54:37,191 [wrapper] ==== wrapper stderr END ====
2026-06-05 01:54:38 (19308): Guest Log:  *** Error codes and diagnostics ***
2026-06-05 01:54:38 (19308): Guest Log:     "exeErrorCode": 65,
2026-06-05 01:54:38 (19308): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: \"ServiceManager      FATAL No Service factory for Geo2G4Svc available.\"",
2026-06-05 01:54:38 (19308): Guest Log:     "pilotErrorCode": 1305,
2026-06-05 01:54:38 (19308): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: \"ServiceManager      FATAL No Service factory for Geo2G4Svc available.\"",
2026-06-05 01:54:38 (19308): Guest Log:  *** Listing of results directory ***
2026-06-05 01:54:38 (19308): Guest Log: total 4112
2026-06-05 01:54:38 (19308): Guest Log: -rw-r--r--. 1 atlas atlas  706490 Jun  5 08:11 pilot3.tar.gz
2026-06-05 01:54:38 (19308): Guest Log: -rw-r--r--. 1 atlas atlas    5630 Jun  5 08:15 queuedata.json
2026-06-05 01:54:38 (19308): Guest Log: -rwx------. 1 atlas atlas   36281 Jun  5 08:15 runpilot2-wrapper.sh
2026-06-05 01:54:38 (19308): Guest Log: -rwxr-xr-x. 1 atlas atlas    8774 Jun  5 08:30 init_data.xml
2026-06-05 01:54:38 (19308): Guest Log: -rwxr-xr-x. 1 atlas atlas  719756 Jun  5 08:30 input.tar.gz
2026-06-05 01:54:38 (19308): Guest Log: -rwxr-xr-x. 1 atlas atlas   15665 Jun  5 08:30 start_atlas.sh
2026-06-05 01:54:38 (19308): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Jun  5 08:30 EVNT.50469892._000341.pool.root.1 -> /data/./ATLAS.root_0
2026-06-05 01:54:38 (19308): Guest Log: -rw-r--r--. 1 atlas atlas    2551 Jun  5 08:30 pandaJob.out
2026-06-05 01:54:38 (19308): Guest Log: -rw-------. 1 atlas atlas  995880 Jun  5 08:34 agis_schedconf.cvmfs.json
2026-06-05 01:54:38 (19308): Guest Log: -rw-------. 1 atlas atlas       0 Jun  5 08:34 agis_ddmendpoints.agis.ALL.json
2026-06-05 01:54:38 (19308): Guest Log: -rw-------. 1 atlas atlas 1249991 Jun  5 08:34 cric_ddmendpoints.json
2026-06-05 01:54:38 (19308): Guest Log: -rw-------. 1 atlas atlas     439 Jun  5 08:35 workernode_map.json
2026-06-05 01:54:38 (19308): Guest Log: drwx------. 5 atlas atlas    4096 Jun  5 08:35 pilot3
2026-06-05 01:54:38 (19308): Guest Log: -rw-------. 1 atlas atlas    1013 Jun  5 08:44 memory_monitor_summary.json
2026-06-05 01:54:38 (19308): Guest Log: -rw-------. 1 atlas atlas   45742 Jun  5 08:47 log.50591392._008691.job.log.tgz.1
2026-06-05 01:54:38 (19308): Guest Log: -rw-------. 1 atlas atlas    8269 Jun  5 08:49 heartbeat_new.json
2026-06-05 01:54:38 (19308): Guest Log: -rw-------. 1 atlas atlas    8231 Jun  5 08:49 heartbeat.json
2026-06-05 01:54:38 (19308): Guest Log: -rw-------. 1 atlas atlas      95 Jun  5 08:50 pilot_heartbeat.json
2026-06-05 01:54:38 (19308): Guest Log: -rw-------. 1 atlas atlas    4986 Jun  5 08:50 pilotlog.txt
2026-06-05 01:54:38 (19308): Guest Log: -rw-------. 1 atlas atlas       0 Jun  5 08:51 wrapper_sigint_6133
2026-06-05 01:54:38 (19308): Guest Log: -rw-------. 1 atlas atlas  129619 Jun  5 08:54 log.50591392._008691.job.log.1
2026-06-05 01:54:38 (19308): Guest Log: -rw-------. 1 atlas atlas     188 Jun  5 08:54 output.list
2026-06-05 01:54:38 (19308): Guest Log: -rw-r--r--. 1 atlas atlas     410 Jun  5 08:54 runtime_log
2026-06-05 01:54:38 (19308): Guest Log: -rw-------. 1 atlas atlas  194560 Jun  5 08:54 result.tar.gz
2026-06-05 01:54:38 (19308): Guest Log: -rw-r--r--. 1 atlas atlas    8236 Jun  5 08:54 runtime_log.err
2026-06-05 01:54:38 (19308): Guest Log: -rw-------. 1 atlas atlas     651 Jun  5 08:54 85bef190fb9a.diag
2026-06-05 01:54:38 (19308): Guest Log: Looking for outputfile HITS.50591392._008691.pool.root.1
2026-06-05 01:54:38 (19308): Guest Log: No HITS file was produced
2026-06-05 01:54:38 (19308): Guest Log: Successfully finished the ATLAS job!
2026-06-05 01:54:38 (19308): Guest Log: Copying the results back to the shared directory!
2026-06-05 01:54:38 (19308): Guest Log:  *** Contents of shared directory: ***
2026-06-05 01:54:38 (19308): Guest Log: total 289952
2026-06-05 01:54:38 (19308): Guest Log: -rwxrwxrwx. 1 root root 295960992 Jun  5 08:29 ATLAS.root_0
2026-06-05 01:54:38 (19308): Guest Log: -rwxrwxrwx. 1 root root      8774 Jun  5 08:29 init_data.xml
2026-06-05 01:54:38 (19308): Guest Log: -rwxrwxrwx. 1 root root    719756 Jun  5 08:29 input.tar.gz
2026-06-05 01:54:38 (19308): Guest Log: -rwxrwxrwx. 1 root root    194560 Jun  5 08:54 result.tar.gz
2026-06-05 01:54:38 (19308): Guest Log: -rwxrwxrwx. 1 root root     15665 Jun  5 08:29 start_atlas.sh
2026-06-05 01:54:38 (19308): Guest Log:  *** Success! Shutting down the machine. ***
2026-06-05 01:54:38 (19308): VM Completion File Detected.
2026-06-05 01:54:38 (19308): Powering off VM.
2026-06-05 01:54:40 (19308): Successfully stopped VM.
2026-06-05 01:54:40 (19308): Deregistering VM. (boinc_8ad849fb981c3d38, slot#19)
2026-06-05 01:54:40 (19308): Removing network bandwidth throttle group from VM.
2026-06-05 01:54:40 (19308): Removing VM from VirtualBox.
2026-06-05 01:54:46 (19308): called boinc_finish(0)

</stderr_txt>
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