Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:02:14 (3550758): wrapper (7.7.26015): starting
15:02:14 (3550758): wrapper: running run_atlas (--nthreads 4)
[2026-05-31 15:02:14] Arguments: --nthreads 4
[2026-05-31 15:02:14] Threads: 4
[2026-05-31 15:02:14] Checking for CVMFS
[2026-05-31 15:02:14] No cvmfs_config command found, will try listing directly
[2026-05-31 15:02:14] CVMFS is ok
[2026-05-31 15:02:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-31 15:02:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-31 15:02:14] Further information can be found at the LHC@home message board.
[2026-05-31 15:02:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-31 15:02:14] Checking for apptainer binary...
[2026-05-31 15:02:14] which: no apptainer in ((null))
[2026-05-31 15:02:14] apptainer is not installed, using version from CVMFS
[2026-05-31 15:02:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-31 15:02:14] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot60/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2026-05-31 15:02:14] apptainer works
[2026-05-31 15:02:14] Set ATHENA_PROC_NUMBER=4
[2026-05-31 15:02:14] Set ATHENA_CORE_NUMBER=4
[2026-05-31 15:02:14] Starting ATLAS job with PandaID=7160760245
[2026-05-31 15:02:14] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot60/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-31 16:56:08]  *** The last 200 lines of the pilot log: ***
[2026-05-31 16:56:08] 2026-05-31 14:54:23,752 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-31 16:56:08] 2026-05-31 14:54:23,754 | INFO     | fitting pss+swap vs Time
[2026-05-31 16:56:08] 2026-05-31 14:54:23,755 | INFO     | sum of square deviations: 412686807.5
[2026-05-31 16:56:08] 2026-05-31 14:54:23,755 | INFO     | sum of deviations: 3878848663.000001
[2026-05-31 16:56:08] 2026-05-31 14:54:23,755 | INFO     | mean x (centered): 0.0
[2026-05-31 16:56:08] 2026-05-31 14:54:23,755 | INFO     | mean y: 2275013.654545455
[2026-05-31 16:56:08] 2026-05-31 14:54:23,755 | INFO     | intersect: 2275013.654545455
[2026-05-31 16:56:08] 2026-05-31 14:54:23,756 | INFO     | chi2: 1.9973616928443354
[2026-05-31 16:56:08] 2026-05-31 14:54:23,756 | INFO     | sum of square deviations: 358927660.0
[2026-05-31 16:56:08] 2026-05-31 14:54:23,756 | INFO     | sum of deviations: 10354965086.0
[2026-05-31 16:56:08] 2026-05-31 14:54:23,757 | INFO     | mean x (centered): 0.0
[2026-05-31 16:56:08] 2026-05-31 14:54:23,757 | INFO     | mean y: 2292664.6476190477
[2026-05-31 16:56:08] 2026-05-31 14:54:23,757 | INFO     | intersect: 2292664.6476190477
[2026-05-31 16:56:08] 2026-05-31 14:54:23,757 | INFO     | chi2: 1.1796762617382235
[2026-05-31 16:56:08] 2026-05-31 14:54:23,757 | INFO     | current chi2=1.1796762617382235 (change=40.93827542780647 %)
[2026-05-31 16:56:08] 2026-05-31 14:54:23,757 | INFO     | sum of square deviations: 310052325.0
[2026-05-31 16:56:08] 2026-05-31 14:54:23,758 | INFO     | sum of deviations: 9799122655.000002
[2026-05-31 16:56:08] 2026-05-31 14:54:23,758 | INFO     | mean x (centered): 0.0
[2026-05-31 16:56:08] 2026-05-31 14:54:23,758 | INFO     | mean y: 2290928.96
[2026-05-31 16:56:08] 2026-05-31 14:54:23,758 | INFO     | intersect: 2290928.96
[2026-05-31 16:56:08] 2026-05-31 14:54:23,758 | INFO     | chi2: 1.1818345886328803
[2026-05-31 16:56:08] 2026-05-31 14:54:23,758 | INFO     | current chi2=1.1818345886328803 (change=-0.18295925455654594 %)
[2026-05-31 16:56:08] 2026-05-31 14:54:23,758 | INFO     | right removable region: 99
[2026-05-31 16:56:08] 2026-05-31 14:54:23,759 | INFO     | sum of square deviations: 358927660.0
[2026-05-31 16:56:08] 2026-05-31 14:54:23,759 | INFO     | sum of deviations: -7510465607.0
[2026-05-31 16:56:08] 2026-05-31 14:54:23,759 | INFO     | mean x (centered): 0.0
[2026-05-31 16:56:08] 2026-05-31 14:54:23,759 | INFO     | mean y: 2306427.961904762
[2026-05-31 16:56:08] 2026-05-31 14:54:23,759 | INFO     | intersect: 2306427.961904762
[2026-05-31 16:56:08] 2026-05-31 14:54:23,760 | INFO     | chi2: 0.8563874623455161
[2026-05-31 16:56:08] 2026-05-31 14:54:23,760 | INFO     | current chi2=0.8563874623455161 (change=57.12406694222813 %)
[2026-05-31 16:56:08] 2026-05-31 14:54:23,760 | INFO     | sum of square deviations: 310052325.0
[2026-05-31 16:56:08] 2026-05-31 14:54:23,760 | INFO     | sum of deviations: -6422406197.5
[2026-05-31 16:56:08] 2026-05-31 14:54:23,761 | INFO     | mean x (centered): 0.0
[2026-05-31 16:56:08] 2026-05-31 14:54:23,761 | INFO     | mean y: 2303018.61
[2026-05-31 16:56:08] 2026-05-31 14:54:23,761 | INFO     | intersect: 2303018.61
[2026-05-31 16:56:08] 2026-05-31 14:54:23,761 | INFO     | chi2: 0.8559756229467423
[2026-05-31 16:56:08] 2026-05-31 14:54:23,761 | INFO     | current chi2=0.8559756229467423 (change=0.04809031155661658 %)
[2026-05-31 16:56:08] 2026-05-31 14:54:23,761 | INFO     | left removable region: 10
[2026-05-31 16:56:08] 2026-05-31 14:54:23,761 | INFO     | sum of square deviations: 218571540.0
[2026-05-31 16:56:08] 2026-05-31 14:54:23,762 | INFO     | sum of deviations: -143109843.00000012
[2026-05-31 16:56:08] 2026-05-31 14:54:23,762 | INFO     | mean x (centered): 0.0
[2026-05-31 16:56:08] 2026-05-31 14:54:23,762 | INFO     | mean y: 2323774.191011236
[2026-05-31 16:56:08] 2026-05-31 14:54:23,762 | INFO     | intersect: 2323774.191011236
[2026-05-31 16:56:08] 2026-05-31 14:54:23,762 | INFO     | chi2: 0.003125838653554956
[2026-05-31 16:56:08] 2026-05-31 14:54:23,762 | INFO     | current memory leak: -0.65 B/s (using 89 data points, chi2=0.00)
[2026-05-31 16:56:08] 2026-05-31 14:54:23,763 | INFO     | could have reported an average CPU frequency of 2755 MHz (7 samples)
[2026-05-31 16:56:08] 2026-05-31 14:54:23,763 | INFO     | ..............................
[2026-05-31 16:56:08] 2026-05-31 14:54:23,763 | INFO     | . Timing measurements:
[2026-05-31 16:56:08] 2026-05-31 14:54:23,763 | INFO     | . get job = 0 s
[2026-05-31 16:56:08] 2026-05-31 14:54:23,763 | INFO     | . initial setup = 7 s
[2026-05-31 16:56:08] 2026-05-31 14:54:23,763 | INFO     | . payload setup = 14 s
[2026-05-31 16:56:08] 2026-05-31 14:54:23,763 | INFO     | . stage-in = 0 s
[2026-05-31 16:56:08] 2026-05-31 14:54:23,763 | INFO     | . payload execution = 6675 s
[2026-05-31 16:56:08] 2026-05-31 14:54:23,763 | INFO     | . stage-out = 0 s
[2026-05-31 16:56:08] 2026-05-31 14:54:23,764 | INFO     | . log creation = 0 s
[2026-05-31 16:56:08] 2026-05-31 14:54:23,764 | INFO     | ..............................
[2026-05-31 16:56:08] 2026-05-31 14:54:23,865 | INFO     | 
[2026-05-31 16:56:08] 2026-05-31 14:54:23,865 | INFO     | job summary report
[2026-05-31 16:56:08] 2026-05-31 14:54:23,865 | INFO     | --------------------------------------------------
[2026-05-31 16:56:08] 2026-05-31 14:54:23,866 | INFO     | PanDA job id: 7160760245
[2026-05-31 16:56:08] 2026-05-31 14:54:23,866 | INFO     | task id: 50587908
[2026-05-31 16:56:08] 2026-05-31 14:54:23,866 | INFO     | errors: (none)
[2026-05-31 16:56:08] 2026-05-31 14:54:23,866 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-31 16:56:08] 2026-05-31 14:54:23,866 | INFO     | pilot state: finished 
[2026-05-31 16:56:08] 2026-05-31 14:54:23,866 | INFO     | transexitcode: 0
[2026-05-31 16:56:08] 2026-05-31 14:54:23,866 | INFO     | exeerrorcode: 0
[2026-05-31 16:56:08] 2026-05-31 14:54:23,866 | INFO     | exeerrordiag: 
[2026-05-31 16:56:08] 2026-05-31 14:54:23,866 | INFO     | exitcode: 0
[2026-05-31 16:56:08] 2026-05-31 14:54:23,866 | INFO     | exitmsg: OK
[2026-05-31 16:56:08] 2026-05-31 14:54:23,866 | INFO     | cpuconsumptiontime: 25545 s
[2026-05-31 16:56:08] 2026-05-31 14:54:23,866 | INFO     | nevents: 400
[2026-05-31 16:56:08] 2026-05-31 14:54:23,867 | INFO     | neventsw: 0
[2026-05-31 16:56:08] 2026-05-31 14:54:23,867 | INFO     | pid: 3560603
[2026-05-31 16:56:08] 2026-05-31 14:54:23,867 | INFO     | pgrp: 3560603
[2026-05-31 16:56:08] 2026-05-31 14:54:23,867 | INFO     | corecount: 4
[2026-05-31 16:56:08] 2026-05-31 14:54:23,867 | INFO     | event service: False
[2026-05-31 16:56:08] 2026-05-31 14:54:23,867 | INFO     | sizes: {0: 2265781, 1: 2267553, 11: 2267553, 6694: 2294679, 6696: 2303699, 6697: 2304077}
[2026-05-31 16:56:08] 2026-05-31 14:54:23,867 | INFO     | --------------------------------------------------
[2026-05-31 16:56:08] 2026-05-31 14:54:23,867 | INFO     | 
[2026-05-31 16:56:08] 2026-05-31 14:54:23,867 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot60/slots/2
[2026-05-31 16:56:08] 2026-05-31 14:54:23,903 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-31 16:56:08] 2026-05-31 14:54:23,903 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-31 16:56:08] 2026-05-31 14:54:23,903 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-31 16:56:08] 2026-05-31 14:54:23,903 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-31 16:56:08] 2026-05-31 14:54:23,903 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-31 16:56:08] 2026-05-31 14:54:23,903 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-31 16:56:08] 2026-05-31 14:54:23,903 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-31 16:56:08] 2026-05-31 14:54:23,904 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-31 16:56:08] 2026-05-31 14:54:23,904 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-31 16:56:08] 2026-05-31 14:54:23,904 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-31 16:56:08] 2026-05-31 14:54:23,904 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-31 16:56:08] 2026-05-31 14:54:23,904 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-31 16:56:08] 2026-05-31 14:54:23,904 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-31 16:56:08] 2026-05-31 14:54:23,904 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-31 16:56:08] 2026-05-31 14:54:23,904 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-31 16:56:08] 2026-05-31 14:54:23,904 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-31 16:56:08] 2026-05-31 14:54:23,904 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-31 16:56:08] 2026-05-31 14:54:23,904 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-31 16:56:08] 2026-05-31 14:54:23,905 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-31 16:56:08] 2026-05-31 14:54:23,905 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-31 16:56:08] 2026-05-31 14:54:23,905 | INFO     | job 7160760245 has completed (purged errors)
[2026-05-31 16:56:08] 2026-05-31 14:54:23,905 | INFO     | overall cleanup function is called
[2026-05-31 16:56:08] 2026-05-31 14:54:24,914 | INFO     | --- collectZombieJob: --- 10, [3560603]
[2026-05-31 16:56:08] 2026-05-31 14:54:24,914 | INFO     | zombie collector waiting for pid 3560603
[2026-05-31 16:56:08] 2026-05-31 14:54:24,914 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-31 16:56:08] 2026-05-31 14:54:24,914 | INFO     | collected zombie processes
[2026-05-31 16:56:08] 2026-05-31 14:54:24,915 | INFO     | will attempt to kill all subprocesses of pid=3560603
[2026-05-31 16:56:08] 2026-05-31 14:54:26,018 | WARNING  | process 3560603 can no longer be monitored (due to stat problems) - aborting
[2026-05-31 16:56:08] 2026-05-31 14:54:26,258 | INFO     | process IDs to be killed: [3560603] (in reverse order)
[2026-05-31 16:56:08] 2026-05-31 14:54:26,517 | WARNING  | found no corresponding commands to process id(s)
[2026-05-31 16:56:08] 2026-05-31 14:54:26,517 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-31 16:56:08] 2026-05-31 14:54:26,578 | INFO     | did not find any defunct processes belonging to 3560603
[2026-05-31 16:56:08] 2026-05-31 14:54:26,585 | INFO     | using path: /var/lib/boinc/var/slot60/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-05-31 16:56:08] 2026-05-31 14:54:26,586 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot60/slots/2/PanDA_Pilot-7160760245/payload.stdout) since it has not been created yet
[2026-05-31 16:56:08] 2026-05-31 14:54:26,586 | INFO     | executing command: df -mP /var/lib/boinc/var/slot60/slots/2
[2026-05-31 16:56:08] 2026-05-31 14:54:26,609 | INFO     | did not find any defunct processes belonging to 3560603
[2026-05-31 16:56:08] 2026-05-31 14:54:26,610 | INFO     | Ready for new job
[2026-05-31 16:56:08] skipping size check of workdir since it has not been created yet
[2026-05-31 16:56:08] 2026-05-31 14:54:26,612 | INFO     | ***************************************
[2026-05-31 16:56:08] 2026-05-31 14:54:26,612 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-31 16:56:08] 2026-05-31 14:54:26,612 | INFO     | ***************************************
[2026-05-31 16:56:08] 2026-05-31 14:54:26,612 | INFO     | 
[2026-05-31 16:56:08] 2026-05-31 14:54:26,612 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot60/slots/2/PanDA_Pilot-7160760245/HITS.50587908._001510.pool.root.1 since it does not exist
[2026-05-31 16:56:08] 2026-05-31 14:54:26,622 | INFO     | architecture information:
[2026-05-31 16:56:08] 2026-05-31 14:54:26,623 | INFO     | executing command: cat /etc/os-release
[2026-05-31 16:56:08] 2026-05-31 14:54:26,642 | INFO     | cat /etc/os-release:
[2026-05-31 16:56:08] NAME="CentOS Linux"
[2026-05-31 16:56:08] VERSION="7 (Core)"
[2026-05-31 16:56:08] ID="centos"
[2026-05-31 16:56:08] ID_LIKE="rhel fedora"
[2026-05-31 16:56:08] VERSION_ID="7"
[2026-05-31 16:56:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-31 16:56:08] ANSI_COLOR="0;31"
[2026-05-31 16:56:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-31 16:56:08] HOME_URL="https://www.centos.org/"
[2026-05-31 16:56:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-31 16:56:08] 
[2026-05-31 16:56:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-31 16:56:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-31 16:56:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-31 16:56:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-31 16:56:08] 
[2026-05-31 16:56:08] 2026-05-31 14:54:26,642 | INFO     | ***************************************
[2026-05-31 16:56:08] 2026-05-31 14:54:26,999 | INFO     | number of running child processes to parent process 3560603: 1
[2026-05-31 16:56:08] 2026-05-31 14:54:26,999 | INFO     | maximum number of monitored processes: 6
[2026-05-31 16:56:08] 2026-05-31 14:54:26,999 | INFO     | aborting job monitoring since job object (job id=7160760245) has expired
[2026-05-31 16:56:08] 2026-05-31 14:54:27,145 | INFO     | executing command: df -mP /var/lib/boinc/var/slot60/slots/2
[2026-05-31 16:56:08] 2026-05-31 14:54:27,171 | INFO     | sufficient remaining disk space (314061094912 B)
[2026-05-31 16:56:08] 2026-05-31 14:54:27,172 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-31 16:56:08] 2026-05-31 14:54:27,172 | INFO     | current server update state: UPDATING_FINAL
[2026-05-31 16:56:08] 2026-05-31 14:54:27,172 | INFO     | update_server=False
[2026-05-31 16:56:08] 2026-05-31 14:54:27,172 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-31 16:56:08] 2026-05-31 14:54:27,172 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-31 16:56:08] 2026-05-31 14:54:27,173 | INFO     | will abort loop
[2026-05-31 16:56:08] 2026-05-31 14:54:27,892 | INFO     | all payload control threads have been joined
[2026-05-31 16:56:08] 2026-05-31 14:54:28,012 | INFO     | all job control threads have been joined
[2026-05-31 16:56:08] 2026-05-31 14:54:28,177 | INFO     | [job] retrieve thread has finished
[2026-05-31 16:56:08] 2026-05-31 14:54:28,178 | INFO     | [job] job monitor thread has finished
[2026-05-31 16:56:08] 2026-05-31 14:54:28,191 | INFO     | [payload] validate_post thread has finished
[2026-05-31 16:56:08] 2026-05-31 14:54:28,218 | INFO     | all data control threads have been joined
[2026-05-31 16:56:08] 2026-05-31 14:54:28,391 | INFO     | [payload] validate_pre thread has finished
[2026-05-31 16:56:08] 2026-05-31 14:54:28,617 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-31 16:56:08] 2026-05-31 14:54:28,621 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-31 16:56:08] 2026-05-31 14:54:28,684 | INFO     | [data] copytool_in thread has finished
[2026-05-31 16:56:08] 2026-05-31 14:54:28,859 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-31 16:56:08] 2026-05-31 14:54:28,898 | INFO     | [payload] control thread has finished
[2026-05-31 16:56:08] 2026-05-31 14:54:29,018 | INFO     | [job] control thread has finished
[2026-05-31 16:56:08] 2026-05-31 14:54:29,031 | INFO     | [payload] execute_payloads thread has finished
[2026-05-31 16:56:08] 2026-05-31 14:54:29,201 | INFO     | [payload] failed_post thread has finished
[2026-05-31 16:56:08] 2026-05-31 14:54:29,223 | INFO     | [data] control thread has finished
[2026-05-31 16:56:08] 2026-05-31 14:54:29,528 | INFO     | [job] validate thread has finished
[2026-05-31 16:56:08] 2026-05-31 14:54:29,585 | INFO     | [job] create_data_payload thread has finished
[2026-05-31 16:56:08] 2026-05-31 14:54:29,657 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-31 16:56:08] 2026-05-31 14:54:29,864 | INFO     | [job] queue monitor thread has finished
[2026-05-31 16:56:08] 2026-05-31 14:54:30,622 | INFO     | [data] copytool_out thread has finished
[2026-05-31 16:56:08] 2026-05-31 14:54:33,662 | INFO     | [data] queue_monitor thread has finished
[2026-05-31 16:56:08] 2026-05-31 14:54:44,577 | INFO     | [monitor] cgroup control has ended
[2026-05-31 16:56:08] 2026-05-31 14:54:45,749 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22379457115968)>', '<ExcThread(monitor, started 22379219920640)>']
[2026-05-31 16:56:08] 2026-05-31 14:54:50,774 | INFO     | all workflow threads have been joined
[2026-05-31 16:56:08] 2026-05-31 14:54:50,774 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-31 16:56:08] 2026-05-31 14:54:50,774 | INFO     | traces error code: 0
[2026-05-31 16:56:08] 2026-05-31 14:54:50,775 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-31 16:56:08] 2026-05-31 14:54:56,150 | INFO     | PID=3555182 has CPU usage=11.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-05-31 16:56:08] 2026-05-31 14:54:56,150 | INFO     | .. there are 13 such processes running
[2026-05-31 16:56:08] 2026-05-31 14:54:56,152 | INFO     | found 0 job(s) in 20 queues
[2026-05-31 16:56:08] 2026-05-31 14:54:56,152 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-31 16:56:08] 2026-05-31 14:54:56,152 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-31 16:56:08] 2026-05-31 14:54:56,152 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-31 16:56:08] 2026-05-31 14:54:56,153 | CRITICAL | thread 'MainThread' is not alive
[2026-05-31 16:56:08] 2026-05-31 14:54:56,153 | INFO     | [monitor] control thread has ended
[2026-05-31 16:56:08] 2026-05-31 14:54:56,323 [wrapper] ==== pilot stdout END ====
[2026-05-31 16:56:08] 2026-05-31 14:54:56,327 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-31 16:56:08] 2026-05-31 14:54:56,333 [wrapper] pilotpid: 3555182
[2026-05-31 16:56:08] 2026-05-31 14:54:56,337 [wrapper] Pilot exit status: 0
[2026-05-31 16:56:08] 2026-05-31 14:54:56,351 [wrapper] pandaids: 7160760245
[2026-05-31 16:56:08] 2026-05-31 14:54:56,531 [wrapper] cleanup supervisor_pilot 3838649 3555183
[2026-05-31 16:56:08] 2026-05-31 14:54:56,535 [wrapper] Test setup, not cleaning
[2026-05-31 16:56:08] 2026-05-31 14:54:56,539 [wrapper] apfmon messages muted
[2026-05-31 16:56:08] 2026-05-31 14:54:56,543 [wrapper] ==== wrapper stdout END ====
[2026-05-31 16:56:08] 2026-05-31 14:54:56,547 [wrapper] ==== wrapper stderr END ====
[2026-05-31 16:56:08]  *** Error codes and diagnostics ***
[2026-05-31 16:56:08]     "exeErrorCode": 0,
[2026-05-31 16:56:08]     "pilotErrorCode": 0,
[2026-05-31 16:56:08]  *** Listing of results directory ***
[2026-05-31 16:56:08] total 360628
[2026-05-31 16:56:08] -rw-r--r--. 1 boinc boinc    683926 May 31 10:35 pilot3.tar.gz
[2026-05-31 16:56:08] -rw-r--r--. 1 boinc boinc      5631 May 31 10:46 queuedata.json
[2026-05-31 16:56:08] -rwx------. 1 boinc boinc     36281 May 31 10:48 runpilot2-wrapper.sh
[2026-05-31 16:56:08] -rw-r--r--. 1 boinc boinc       100 May 31 14:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-31 16:56:08] -rwxr-xr-x. 1 boinc boinc      7986 May 31 14:53 run_atlas
[2026-05-31 16:56:08] -rw-r--r--. 1 boinc boinc       105 May 31 14:53 job.xml
[2026-05-31 16:56:08] -rw-r--r--. 2 boinc boinc 202199490 May 31 15:02 EVNT.50587906._000061.pool.root.1
[2026-05-31 16:56:08] -rw-r--r--. 1 boinc boinc      6540 May 31 15:02 init_data.xml
[2026-05-31 16:56:08] -rw-r--r--. 2 boinc boinc     15667 May 31 15:02 start_atlas.sh
[2026-05-31 16:56:08] drwxrwx--x. 2 boinc boinc      4096 May 31 15:02 shared
[2026-05-31 16:56:08] -rw-r--r--. 2 boinc boinc    697400 May 31 15:02 input.tar.gz
[2026-05-31 16:56:08] -rw-r--r--. 1 boinc boinc         0 May 31 15:02 boinc_lockfile
[2026-05-31 16:56:08] -rw-r--r--. 1 boinc boinc      2482 May 31 15:02 pandaJob.out
[2026-05-31 16:56:08] -rw-------. 1 boinc boinc    995637 May 31 15:02 agis_schedconf.cvmfs.json
[2026-05-31 16:56:08] -rw-------. 1 boinc boinc   1502789 May 31 15:02 agis_ddmendpoints.agis.ALL.json
[2026-05-31 16:56:08] -rw-------. 1 boinc boinc       443 May 31 15:02 workernode_map.json
[2026-05-31 16:56:08] drwx------. 5 boinc boinc      4096 May 31 15:02 pilot3
[2026-05-31 16:56:08] -rw-------. 1 boinc boinc 161155151 May 31 16:53 HITS.50587908._001510.pool.root.1
[2026-05-31 16:56:08] -rw-r--r--. 1 boinc boinc       486 May 31 16:54 boinc_task_state.xml
[2026-05-31 16:56:08] -rw-------. 1 boinc boinc      1030 May 31 16:54 memory_monitor_summary.json
[2026-05-31 16:56:08] -rw-------. 1 boinc boinc    263483 May 31 16:54 log.50587908._001510.job.log.tgz.1
[2026-05-31 16:56:08] -rw-------. 1 boinc boinc      6368 May 31 16:54 heartbeat_new.json
[2026-05-31 16:56:08] -rw-------. 1 boinc boinc      6259 May 31 16:54 heartbeat.json
[2026-05-31 16:56:08] -rw-------. 1 boinc boinc        95 May 31 16:54 pilot_heartbeat.json
[2026-05-31 16:56:08] -rw-------. 1 boinc boinc       894 May 31 16:54 pilotlog.txt
[2026-05-31 16:56:08] -rw-------. 1 boinc boinc    637338 May 31 16:54 log.50587908._001510.job.log.1
[2026-05-31 16:56:08] -rw-------. 1 boinc boinc       357 May 31 16:54 output.list
[2026-05-31 16:56:08] -rw-r--r--. 1 boinc boinc       410 May 31 16:54 runtime_log
[2026-05-31 16:56:08] -rw-------. 1 boinc boinc    921600 May 31 16:54 result.tar.gz
[2026-05-31 16:56:08] -rw-r--r--. 1 boinc boinc      8827 May 31 16:54 runtime_log.err
[2026-05-31 16:56:08] -rw-------. 1 boinc boinc       662 May 31 16:54 f5ca5e5258ea.diag
[2026-05-31 16:56:08] -rw-r--r--. 1 boinc boinc        26 May 31 16:55 wrapper_checkpoint.txt
[2026-05-31 16:56:08] -rw-r--r--. 1 boinc boinc      8192 May 31 16:56 boinc_mmap_file
[2026-05-31 16:56:08] -rw-r--r--. 1 boinc boinc     20931 May 31 16:56 stderr.txt
[2026-05-31 16:56:08] HITS file was successfully produced:
[2026-05-31 16:56:08] -rw-------. 1 boinc boinc 161155151 May 31 16:53 shared/HITS.pool.root.1
[2026-05-31 16:56:08]  *** Contents of shared directory: ***
[2026-05-31 16:56:08] total 356452
[2026-05-31 16:56:08] -rw-r--r--. 2 boinc boinc 202199490 May 31 15:02 ATLAS.root_0
[2026-05-31 16:56:08] -rw-r--r--. 2 boinc boinc     15667 May 31 15:02 start_atlas.sh
[2026-05-31 16:56:08] -rw-r--r--. 2 boinc boinc    697400 May 31 15:02 input.tar.gz
[2026-05-31 16:56:08] -rw-------. 1 boinc boinc 161155151 May 31 16:53 HITS.pool.root.1
[2026-05-31 16:56:08] -rw-------. 1 boinc boinc    921600 May 31 16:54 result.tar.gz
16:56:09 (3550758): run_atlas exited; CPU time 25882.233238
16:56:09 (3550758): called boinc_finish(0)

</stderr_txt>
]]>

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