Name 272d18d8add1_0
Workunit 241705738
Created 30 May 2026, 18:09:33 UTC
Sent 30 May 2026, 22:14:42 UTC
Report deadline 7 Jun 2026, 22:14:42 UTC
Received 30 May 2026, 23:18:42 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 10823079
Run time 3 min 16 sec
CPU time 16 sec
Priority 28
Validate state Invalid
Credit 0.00
Device peak FLOPS 104.12 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 868.30 MB
Peak swap size 1.59 GB
Peak disk usage 593.20 MB

Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
01:15:11 (1189216): wrapper (7.7.26015): starting
01:15:11 (1189216): wrapper: running run_atlas (--nthreads 12)
[2026-05-31 01:15:11] Arguments: --nthreads 12
[2026-05-31 01:15:11] Threads: 12
[2026-05-31 01:15:11] Checking for CVMFS
[2026-05-31 01:15:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-31 01:15:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-31 01:15:11] Running cvmfs_config stat atlas.cern.ch
[2026-05-31 01:15:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-31 01:15:11] 2.13.1.0 2378814 1489 48432 159980 1 11 2871816 4194305 25 130560 0 47770579 100.000 48235 603 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch DIRECT 1
[2026-05-31 01:15:11] CVMFS is ok
[2026-05-31 01:15:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-31 01:15:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-31 01:15:11] Small home clusters do not require a local http proxy but it is suggested if
[2026-05-31 01:15:11] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-05-31 01:15:11] Further information can be found at the LHC@home message board.
[2026-05-31 01:15:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-31 01:15:11] Checking for apptainer binary...
[2026-05-31 01:15:11] apptainer is not installed, using version from CVMFS
[2026-05-31 01:15:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-31 01:15:11] apptainer isnt working: ERROR  : Could not write info to setgroups: Permission denied
[2026-05-31 01:15:11] ERROR  : Error while waiting event for user namespace mappings: no event received
[2026-05-31 01:15:11] 
[2026-05-31 01:15:11] Falling back to singularity found in PATH at /usr/bin/singularity
[2026-05-31 01:15:11] WARNING: singularity support will be removed in a future version of native ATLAS
[2026-05-31 01:15:11] Please install apptainer instead following the instructions at https://apptainer.org/docs/admin/main/installation.html
[2026-05-31 01:15:11] Checking singularity works with /usr/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-31 01:15:11] singularity works
[2026-05-31 01:15:11] Set ATHENA_PROC_NUMBER=12
[2026-05-31 01:15:11] Set ATHENA_CORE_NUMBER=12
[2026-05-31 01:15:11] Starting ATLAS job with PandaID=7159525136
[2026-05-31 01:15:11] Running command: /usr/bin/singularity exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-31 01:18:25]  *** The last 200 lines of the pilot log: ***
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | WARNING  | found no stored workdir sizes
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | INFO     | will not add max space = 0 B to job metrics
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | WARNING  | wrong length of table data, x=[1780182936.0], y=[774.0] (must be same and length>=4)
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | INFO     | could have reported an average CPU frequency of 3525 MHz (4 samples)
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | INFO     | ..............................
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | INFO     | . Timing measurements:
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | INFO     | . get job = 0 s
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | INFO     | . initial setup = 3 s
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | INFO     | . payload setup = 4 s
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | INFO     | . stage-in = 0 s
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | INFO     | . payload execution = 20 s
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | INFO     | . stage-out = 0 s
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | INFO     | . log creation = 0 s
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | INFO     | ..............................
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | INFO     | executing command: tail -n 20 /var/lib/boinc-client/slots/2/PanDA_Pilot-7159525136/pilotlog.txt
[2026-05-31 01:18:25] 2026-05-30 23:17:53,292 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-05-31 01:18:25] - Log from pilotlog.txt -
[2026-05-31 01:18:25] 2026-05-30 23:17:53,282 | INFO     | extracted standard info from prmon json
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | INFO     | extracted standard memory fields from prmon json
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | WARNING  | found no stored workdir sizes
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | INFO     | will not add max space = 0 B to job metrics
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | WARNING  | wrong length of table data, x=[1780182936.0], y=[774.0] (must be same and length>=4)
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | INFO     | could have reported an average CPU frequency of 3525 MHz (4 samples)
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | INFO     | ..............................
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | INFO     | . Timing measurements:
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | INFO     | . get job = 0 s
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | INFO     | . initial setup = 3 s
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | INFO     | . payload setup = 4 s
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | INFO     | . stage-in = 0 s
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | INFO     | . payload execution = 20 s
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | INFO     | . stage-out = 0 s
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | INFO     | . log creation = 0 s
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | INFO     | ..............................
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | INFO     | executing command: tail -n 20 /var/lib/boinc-client/slots/2/PanDA_Pilot-7159525136/pilotlog.txt
[2026-05-31 01:18:25] 2026-05-30 23:17:53,292 | WARNING  | 
[2026-05-31 01:18:25] [begin log extracts]
[2026-05-31 01:18:25] - Log from pilotlog.txt -
[2026-05-31 01:18:25] 2026-05-30 23:17:53,282 | INFO     | extracted standard info from prmon json
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | INFO     | extracted standard memory fields from prmon json
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | WARNING  | found no stored workdir sizes
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | INFO     | will not add max space = 0 B to job metrics
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | WARNING  | wrong length of table data, x=[1780182936.0], y=[774.0] (must be same and length>=4)
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | INFO     | could have reported an average CPU frequency of 3525 MHz (4 samples)
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | INFO     | ..............................
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | INFO     | . Timing measurements:
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | INFO     | . get job = 0 s
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | INFO     | . initial setup = 3 s
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | INFO     | . payload setup = 4 s
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | INFO     | . stage-in = 0 s
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | INFO     | . payload execution = 20 s
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | INFO     | . stage-out = 0 s
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | INFO     | . log creation = 0 s
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | INFO     | ..............................
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-31 01:18:25] 2026-05-30 23:17:53,283 | INFO     | executing command: tail -n 20 /var/lib/boinc-client/slots/2/PanDA_Pilot-7159525136/pilotlog.txt
[2026-05-31 01:18:25] [end log extracts]
[2026-05-31 01:18:25] 2026-05-30 23:17:53,292 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-05-31 01:18:25] 2026-05-30 23:17:53,293 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero retu
[2026-05-31 01:18:25] 2026-05-30 23:17:53,775 | INFO     | 
[2026-05-31 01:18:25] 2026-05-30 23:17:53,775 | INFO     | job summary report
[2026-05-31 01:18:25] 2026-05-30 23:17:53,775 | INFO     | --------------------------------------------------
[2026-05-31 01:18:25] 2026-05-30 23:17:53,775 | INFO     | PanDA job id: 7159525136
[2026-05-31 01:18:25] 2026-05-30 23:17:53,775 | INFO     | task id: 50533940
[2026-05-31 01:18:25] 2026-05-30 23:17:53,775 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-05-31 01:15:50,788 CRITICAL Transform executor raised TransformValidationExceptio
[2026-05-31 01:18:25] 2026-05-30 23:17:53,775 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-31 01:18:25] 2026-05-30 23:17:53,775 | INFO     | pilot state: failed 
[2026-05-31 01:18:25] 2026-05-30 23:17:53,775 | INFO     | transexitcode: 65
[2026-05-31 01:18:25] 2026-05-30 23:17:53,775 | INFO     | exeerrorcode: 65
[2026-05-31 01:18:25] 2026-05-30 23:17:53,775 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: "Py:ComponentAccumulator   ERROR This ComponentAccumulator was never merge
[2026-05-31 01:18:25] 2026-05-30 23:17:53,775 | INFO     | exitcode: 65
[2026-05-31 01:18:25] 2026-05-30 23:17:53,775 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: "Py:ComponentAccumulator   ERROR This ComponentAccumulator was never merged!"
[2026-05-31 01:18:25] 2026-05-30 23:17:53,775 | INFO     | cpuconsumptiontime: 18 s
[2026-05-31 01:18:25] 2026-05-30 23:17:53,776 | INFO     | nevents: 0
[2026-05-31 01:18:25] 2026-05-30 23:17:53,776 | INFO     | neventsw: 0
[2026-05-31 01:18:25] 2026-05-30 23:17:53,776 | INFO     | pid: 1205544
[2026-05-31 01:18:25] 2026-05-30 23:17:53,776 | INFO     | pgrp: 1205544
[2026-05-31 01:18:25] 2026-05-30 23:17:53,776 | INFO     | corecount: 12
[2026-05-31 01:18:25] 2026-05-30 23:17:53,776 | INFO     | event service: False
[2026-05-31 01:18:25] 2026-05-30 23:17:53,776 | INFO     | sizes: {0: 2267568, 11: 2267568, 27: 2297920, 143: 2298058}
[2026-05-31 01:18:25] 2026-05-30 23:17:53,776 | INFO     | --------------------------------------------------
[2026-05-31 01:18:25] 2026-05-30 23:17:53,776 | INFO     | 
[2026-05-31 01:18:25] 2026-05-30 23:17:53,776 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2026-05-31 01:18:25] 2026-05-30 23:17:53,788 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-31 01:18:25] 2026-05-30 23:17:53,788 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-31 01:18:25] 2026-05-30 23:17:53,788 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-31 01:18:25] 2026-05-30 23:17:53,788 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-31 01:18:25] 2026-05-30 23:17:53,789 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-31 01:18:25] 2026-05-30 23:17:53,789 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-31 01:18:25] 2026-05-30 23:17:53,789 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-31 01:18:25] 2026-05-30 23:17:53,789 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-31 01:18:25] 2026-05-30 23:17:53,789 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-31 01:18:25] 2026-05-30 23:17:53,789 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-31 01:18:25] 2026-05-30 23:17:53,789 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-31 01:18:25] 2026-05-30 23:17:53,789 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-31 01:18:25] 2026-05-30 23:17:53,789 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-31 01:18:25] 2026-05-30 23:17:53,789 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-31 01:18:25] 2026-05-30 23:17:53,789 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-31 01:18:25] 2026-05-30 23:17:53,789 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-31 01:18:25] 2026-05-30 23:17:53,789 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-31 01:18:25] 2026-05-30 23:17:53,789 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-31 01:18:25] 2026-05-30 23:17:53,789 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-31 01:18:25] 2026-05-30 23:17:53,789 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-31 01:18:25] 2026-05-30 23:17:53,789 | INFO     | job 7159525136 has completed (purged errors)
[2026-05-31 01:18:25] 2026-05-30 23:17:53,789 | INFO     | overall cleanup function is called
[2026-05-31 01:18:25] 2026-05-30 23:17:54,795 | INFO     | --- collectZombieJob: --- 10, [1205544]
[2026-05-31 01:18:25] 2026-05-30 23:17:54,795 | INFO     | zombie collector waiting for pid 1205544
[2026-05-31 01:18:25] 2026-05-30 23:17:54,795 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-31 01:18:25] 2026-05-30 23:17:54,795 | INFO     | collected zombie processes
[2026-05-31 01:18:25] 2026-05-30 23:17:54,795 | INFO     | will attempt to kill all subprocesses of pid=1205544
[2026-05-31 01:18:25] 2026-05-30 23:17:54,837 | INFO     | process IDs to be killed: [1205544] (in reverse order)
[2026-05-31 01:18:25] 2026-05-30 23:17:54,865 | WARNING  | found no corresponding commands to process id(s)
[2026-05-31 01:18:25] 2026-05-30 23:17:54,866 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-31 01:18:25] 2026-05-30 23:17:54,867 | INFO     | did not find any defunct processes belonging to 1205544
[2026-05-31 01:18:25] 2026-05-30 23:17:54,869 | INFO     | did not find any defunct processes belonging to 1205544
[2026-05-31 01:18:25] 2026-05-30 23:17:54,869 | INFO     | Ready for new job
[2026-05-31 01:18:25] 2026-05-30 23:17:54,870 | INFO     | ***************************************
[2026-05-31 01:18:25] 2026-05-30 23:17:54,870 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-31 01:18:25] 2026-05-30 23:17:54,870 | INFO     | ***************************************
[2026-05-31 01:18:25] 2026-05-30 23:17:54,870 | INFO     | 
[2026-05-31 01:18:25] 2026-05-30 23:17:54,870 | INFO     | architecture information:
[2026-05-31 01:18:25] 2026-05-30 23:17:54,870 | INFO     | executing command: cat /etc/os-release
[2026-05-31 01:18:25] 2026-05-30 23:17:54,878 | INFO     | cat /etc/os-release:
[2026-05-31 01:18:25] NAME="CentOS Linux"
[2026-05-31 01:18:25] VERSION="7 (Core)"
[2026-05-31 01:18:25] ID="centos"
[2026-05-31 01:18:25] ID_LIKE="rhel fedora"
[2026-05-31 01:18:25] VERSION_ID="7"
[2026-05-31 01:18:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-31 01:18:25] ANSI_COLOR="0;31"
[2026-05-31 01:18:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-31 01:18:25] HOME_URL="https://www.centos.org/"
[2026-05-31 01:18:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-31 01:18:25] 
[2026-05-31 01:18:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-31 01:18:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-31 01:18:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-31 01:18:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-31 01:18:25] 
[2026-05-31 01:18:25] 2026-05-30 23:17:54,878 | INFO     | ***************************************
[2026-05-31 01:18:25] 2026-05-30 23:17:55,381 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2026-05-31 01:18:25] 2026-05-30 23:17:55,388 | INFO     | sufficient remaining disk space (51957989376 B)
[2026-05-31 01:18:25] 2026-05-30 23:17:55,388 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-31 01:18:25] 2026-05-30 23:17:55,388 | INFO     | current server update state: UPDATING_FINAL
[2026-05-31 01:18:25] 2026-05-30 23:17:55,388 | INFO     | update_server=False
[2026-05-31 01:18:25] 2026-05-30 23:17:55,388 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-31 01:18:25] 2026-05-30 23:17:55,476 | INFO     | all job control threads have been joined
[2026-05-31 01:18:25] 2026-05-30 23:17:55,547 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-31 01:18:25] 2026-05-30 23:17:55,547 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-31 01:18:25] 2026-05-30 23:17:55,547 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-31 01:18:25] 2026-05-30 23:17:55,547 | INFO     | will abort loop
[2026-05-31 01:18:25] 2026-05-30 23:17:55,732 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-31 01:18:25] 2026-05-30 23:17:56,209 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-31 01:18:25] 2026-05-30 23:17:56,361 | INFO     | all data control threads have been joined
[2026-05-31 01:18:25] 2026-05-30 23:17:56,393 | INFO     | [job] retrieve thread has finished
[2026-05-31 01:18:25] 2026-05-30 23:17:56,396 | INFO     | [job] create_data_payload thread has finished
[2026-05-31 01:18:25] 2026-05-30 23:17:56,443 | INFO     | [payload] validate_pre thread has finished
[2026-05-31 01:18:25] 2026-05-30 23:17:56,481 | INFO     | [job] control thread has finished
[2026-05-31 01:18:25] 2026-05-30 23:17:56,528 | INFO     | [data] copytool_in thread has finished
[2026-05-31 01:18:25] 2026-05-30 23:17:56,536 | INFO     | all payload control threads have been joined
[2026-05-31 01:18:25] 2026-05-30 23:17:56,544 | INFO     | [payload] validate_post thread has finished
[2026-05-31 01:18:25] 2026-05-30 23:17:56,552 | INFO     | [job] job monitor thread has finished
[2026-05-31 01:18:25] 2026-05-30 23:17:56,938 | INFO     | [payload] execute_payloads thread has finished
[2026-05-31 01:18:25] 2026-05-30 23:17:57,005 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-31 01:18:25] 2026-05-30 23:17:57,073 | INFO     | [payload] failed_post thread has finished
[2026-05-31 01:18:25] 2026-05-30 23:17:57,366 | INFO     | [data] control thread has finished
[2026-05-31 01:18:25] 2026-05-30 23:17:57,541 | INFO     | [payload] control thread has finished
[2026-05-31 01:18:25] 2026-05-30 23:17:57,738 | INFO     | [data] copytool_out thread has finished
[2026-05-31 01:18:25] 2026-05-30 23:17:57,815 | INFO     | [job] validate thread has finished
[2026-05-31 01:18:25] 2026-05-30 23:17:58,333 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-31 01:18:25] 2026-05-30 23:17:59,338 | INFO     | [job] queue monitor thread has finished
[2026-05-31 01:18:25] 2026-05-30 23:18:00,214 | INFO     | [data] queue_monitor thread has finished
[2026-05-31 01:18:25] 2026-05-30 23:18:18,689 | INFO     | [monitor] cgroup control has ended
[2026-05-31 01:18:25] 2026-05-30 23:18:19,982 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126482032486208)>', '<ExcThread(monitor, started 126481409763072)>']
[2026-05-31 01:18:25] 2026-05-30 23:18:25,007 | INFO     | all workflow threads have been joined
[2026-05-31 01:18:25] 2026-05-30 23:18:25,007 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-31 01:18:25] 2026-05-30 23:18:25,007 | INFO     | traces error code: 0
[2026-05-31 01:18:25] 2026-05-30 23:18:25,007 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-31 01:18:25] 2026-05-30 23:18:25,401 | INFO     | PID=1196048 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-31 01:18:25] 2026-05-30 23:18:25,401 | INFO     | .. there are 2 such processes running
[2026-05-31 01:18:25] 2026-05-30 23:18:25,402 | INFO     | found 0 job(s) in 20 queues
[2026-05-31 01:18:25] 2026-05-30 23:18:25,402 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-31 01:18:25] 2026-05-30 23:18:25,402 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-31 01:18:25] 2026-05-30 23:18:25,402 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-31 01:18:25] 2026-05-30 23:18:25,402 | INFO     | [monitor] control thread has ended
[2026-05-31 01:18:25] 2026-05-30 23:18:25,442 [wrapper] ==== pilot stdout END ====
[2026-05-31 01:18:25] 2026-05-30 23:18:25,443 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-31 01:18:25] 2026-05-30 23:18:25,445 [wrapper] pilotpid: 1196048
[2026-05-31 01:18:25] 2026-05-30 23:18:25,446 [wrapper] Pilot exit status: 0
[2026-05-31 01:18:25] 2026-05-30 23:18:25,451 [wrapper] pandaids: 7159525136
[2026-05-31 01:18:25] 2026-05-30 23:18:25,468 [wrapper] cleanup supervisor_pilot 1196054 1196049
[2026-05-31 01:18:25] 2026-05-30 23:18:25,469 [wrapper] Test setup, not cleaning
[2026-05-31 01:18:25] 2026-05-30 23:18:25,471 [wrapper] apfmon messages muted
[2026-05-31 01:18:25] 2026-05-30 23:18:25,472 [wrapper] ==== wrapper stdout END ====
[2026-05-31 01:18:25] 2026-05-30 23:18:25,473 [wrapper] ==== wrapper stderr END ====
[2026-05-31 01:18:25]  *** Error codes and diagnostics ***
[2026-05-31 01:18:25]     "exeErrorCode": 65,
[2026-05-31 01:18:25]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: \"Py:ComponentAccumulator   ERROR This ComponentAccumulator was never merged!\"",
[2026-05-31 01:18:25]     "pilotErrorCode": 1305,
[2026-05-31 01:18:25]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: \"Py:ComponentAccumulator   ERROR This ComponentAccumulator was never merged!\"",
[2026-05-31 01:18:25]  *** Listing of results directory ***
[2026-05-31 01:18:25] total 305452
[2026-05-31 01:18:25] -rw-r--r-- 1 boinc boinc      5631 May 30 20:06 queuedata.json
[2026-05-31 01:18:25] -rw-r--r-- 1 boinc boinc    683926 May 30 20:06 pilot3.tar.gz
[2026-05-31 01:18:25] -rwx------ 1 boinc boinc     36281 May 30 20:06 runpilot2-wrapper.sh
[2026-05-31 01:18:25] -rw-r--r-- 1 boinc boinc       100 May 31 01:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-31 01:18:25] -rwxr-xr-x 1 boinc boinc      7986 May 31 01:15 run_atlas
[2026-05-31 01:18:25] -rw-r--r-- 1 boinc boinc       105 May 31 01:15 job.xml
[2026-05-31 01:18:25] -rw-r--r-- 2 boinc boinc 308424869 May 31 01:15 EVNT.50532940._000535.pool.root.1
[2026-05-31 01:18:25] -rw-r--r-- 2 boinc boinc    697409 May 31 01:15 input.tar.gz
[2026-05-31 01:18:25] drwxrwx--x 2 boinc boinc      4096 May 31 01:15 shared
[2026-05-31 01:18:25] -rw-r--r-- 1 boinc boinc         0 May 31 01:15 boinc_setup_complete
[2026-05-31 01:18:25] -rw-r--r-- 2 boinc boinc     15667 May 31 01:15 start_atlas.sh
[2026-05-31 01:18:25] -rw-r--r-- 1 boinc boinc      9098 May 31 01:15 init_data.xml
[2026-05-31 01:18:25] -rw-r--r-- 1 boinc boinc         0 May 31 01:15 boinc_lockfile
[2026-05-31 01:18:25] -rw-r--r-- 1 boinc boinc      2514 May 31 01:15 pandaJob.out
[2026-05-31 01:18:25] -rw------- 1 boinc boinc    995580 May 31 01:15 agis_schedconf.cvmfs.json
[2026-05-31 01:18:25] -rw------- 1 boinc boinc   1502789 May 31 01:15 agis_ddmendpoints.agis.ALL.json
[2026-05-31 01:18:25] -rw------- 1 boinc boinc       417 May 31 01:15 workernode_map.json
[2026-05-31 01:18:25] drwx------ 5 boinc boinc      4096 May 31 01:15 pilot3
[2026-05-31 01:18:25] -rw------- 1 boinc boinc       945 May 31 01:15 memory_monitor_summary.json
[2026-05-31 01:18:25] -rw-r--r-- 1 boinc boinc       480 May 31 01:15 boinc_task_state.xml
[2026-05-31 01:18:25] -rw------- 1 boinc boinc     34968 May 31 01:15 log.50533940._012082.job.log.tgz.1
[2026-05-31 01:18:25] -rw------- 1 boinc boinc      8397 May 31 01:17 heartbeat_new.json
[2026-05-31 01:18:25] -rw------- 1 boinc boinc      8359 May 31 01:17 heartbeat.json
[2026-05-31 01:18:25] -rw-r--r-- 1 boinc boinc      8192 May 31 01:18 boinc_mmap_file
[2026-05-31 01:18:25] -rw-r--r-- 1 boinc boinc        22 May 31 01:18 wrapper_checkpoint.txt
[2026-05-31 01:18:25] -rw------- 1 boinc boinc        95 May 31 01:18 pilot_heartbeat.json
[2026-05-31 01:18:25] -rw------- 1 boinc boinc       822 May 31 01:18 pilotlog.txt
[2026-05-31 01:18:25] -rw------- 1 boinc boinc     74695 May 31 01:18 log.50533940._012082.job.log.1
[2026-05-31 01:18:25] -rw------- 1 boinc boinc       188 May 31 01:18 output.list
[2026-05-31 01:18:25] -rw-r--r-- 1 boinc boinc       410 May 31 01:18 runtime_log
[2026-05-31 01:18:25] -rw------- 1 boinc boinc    133120 May 31 01:18 result.tar.gz
[2026-05-31 01:18:25] -rw-r--r-- 1 boinc boinc      8328 May 31 01:18 runtime_log.err
[2026-05-31 01:18:25] -rw------- 1 boinc boinc       625 May 31 01:18 272d18d8add1.diag
[2026-05-31 01:18:25] -rw-r--r-- 1 boinc boinc     22954 May 31 01:18 stderr.txt
[2026-05-31 01:18:25] No HITS result produced
[2026-05-31 01:18:25]  *** Contents of shared directory: ***
[2026-05-31 01:18:25] total 302036
[2026-05-31 01:18:25] -rw-r--r-- 2 boinc boinc 308424869 May 31 01:15 ATLAS.root_0
[2026-05-31 01:18:25] -rw-r--r-- 2 boinc boinc    697409 May 31 01:15 input.tar.gz
[2026-05-31 01:18:25] -rw-r--r-- 2 boinc boinc     15667 May 31 01:15 start_atlas.sh
[2026-05-31 01:18:25] -rw------- 1 boinc boinc    133120 May 31 01:18 result.tar.gz
01:18:26 (1189216): run_atlas exited; CPU time 16.785532
01:18:26 (1189216): called boinc_finish(0)

</stderr_txt>
]]>


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