Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:42:22 (1130726): wrapper (7.7.26015): starting
19:42:22 (1130726): wrapper: running run_atlas (--nthreads 12)
[2026-05-30 19:42:22] Arguments: --nthreads 12
[2026-05-30 19:42:22] Threads: 12
[2026-05-30 19:42:22] Checking for CVMFS
[2026-05-30 19:42:22] No cvmfs_config command found, will try listing directly
[2026-05-30 19:42:22] CVMFS is ok
[2026-05-30 19:42:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-30 19:42:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-30 19:42:22] Further information can be found at the LHC@home message board.
[2026-05-30 19:42:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-30 19:42:22] Checking for apptainer binary...
[2026-05-30 19:42:22] which: no apptainer in ((null))
[2026-05-30 19:42:22] apptainer is not installed, using version from CVMFS
[2026-05-30 19:42:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-30 19:42:22] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot216/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-05-30 19:42:22] apptainer works
[2026-05-30 19:42:22] Set ATHENA_PROC_NUMBER=12
[2026-05-30 19:42:22] Set ATHENA_CORE_NUMBER=12
[2026-05-30 19:42:22] Starting ATLAS job with PandaID=7158816558
[2026-05-30 19:42:22] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot216/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-30 20:12:00]  *** The last 200 lines of the pilot log: ***
[2026-05-30 20:12:00]  filetype=log
[2026-05-30 20:12:00]  guid=c3d3440d-7347-4a19-ab71-7239471c8a24
[2026-05-30 20:12:00]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-05-30 20:12:00]  is_altstaged=None
[2026-05-30 20:12:00]  is_tar=False
[2026-05-30 20:12:00]  lfn=log.50533925._012561.job.log.tgz.1
[2026-05-30 20:12:00]  mtime=0
[2026-05-30 20:12:00]  protocol_id=None
[2026-05-30 20:12:00]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-05-30 20:12:00]  replicas=None
[2026-05-30 20:12:00]  scope=mc23_13p6TeV
[2026-05-30 20:12:00]  status=None
[2026-05-30 20:12:00]  status_code=0
[2026-05-30 20:12:00]  storage_token=
[2026-05-30 20:12:00]  surl=/var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7158816558/log.50533925._012561.job.log.tgz.1
[2026-05-30 20:12:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3a/77/log.50533925._012561.job.log.tgz.1
[2026-05-30 20:12:00]  workdir=None
[2026-05-30 20:12:00] ]
[2026-05-30 20:12:00] 2026-05-30 18:09:28,945 | INFO     | transferring file log.50533925._012561.job.log.tgz.1 from /var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7158816558/log.50533925._012561.job.log.tgz.1 to /var/lib/
[2026-05-30 20:12:00] 2026-05-30 18:09:28,945 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7158816558/log.50533925._012561.job.log.tgz.1 /var/lib/boinc/var/slot216/slots/1/
[2026-05-30 20:12:00] 2026-05-30 18:09:28,961 | INFO     | adding to output.list: log.50533925._012561.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3a/77/log.50533925._012561.job.log.tg
[2026-05-30 20:12:00] 2026-05-30 18:09:28,961 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-05-30 20:12:00] 2026-05-30 18:09:28,961 | INFO     | summary of transferred files:
[2026-05-30 20:12:00] 2026-05-30 18:09:28,961 | INFO     |  -- lfn=log.50533925._012561.job.log.tgz.1, status_code=0, status=transferred
[2026-05-30 20:12:00] 2026-05-30 18:09:28,961 | INFO     | stage-out finished correctly
[2026-05-30 20:12:00] 2026-05-30 18:09:29,324 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-30 20:12:00] 2026-05-30 18:09:30,106 | INFO     | PID=1138516 has CPU usage=10.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-05-30 20:12:00] 2026-05-30 18:09:30,107 | INFO     | .. there are 8 such processes running
[2026-05-30 20:12:00] 2026-05-30 18:09:30,136 | INFO     | monitor loop #125: job 0:7158816558 is in state 'finished'
[2026-05-30 20:12:00] 2026-05-30 18:09:30,136 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-30 20:12:00] 2026-05-30 18:09:31,048 | INFO     | job 7158816558 has state=finished
[2026-05-30 20:12:00] 2026-05-30 18:09:31,049 | INFO     | preparing for final server update for job 7158816558 in state='finished'
[2026-05-30 20:12:00] 2026-05-30 18:09:31,593 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-05-30 20:12:00] 2026-05-30 18:09:31,593 | INFO     | reading metadata from: /var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7158816558/jobReport.json
[2026-05-30 20:12:00] 2026-05-30 18:09:31,595 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot216/slots/1/workernode_map.json
[2026-05-30 20:12:00] 2026-05-30 18:09:31,595 | INFO     | this job has now completed (state=finished)
[2026-05-30 20:12:00] 2026-05-30 18:09:31,595 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-30 20:12:00] 2026-05-30 18:09:31,595 | INFO     | log transfer has been attempted: DONE
[2026-05-30 20:12:00] 2026-05-30 18:09:31,595 | INFO     | job 7158816558 has finished - writing final server update
[2026-05-30 20:12:00] 2026-05-30 18:09:31,595 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_283297/.job.ad'
[2026-05-30 20:12:00] 2026-05-30 18:09:31,595 | INFO     | total number of processed events: 400 (read)
[2026-05-30 20:12:00] 2026-05-30 18:09:31,612 | INFO     | using path: /var/lib/boinc/var/slot216/slots/1/PanDA_Pilot-7158816558/memory_monitor_summary.json (trf name=prmon)
[2026-05-30 20:12:00] 2026-05-30 18:09:31,613 | INFO     | extracted standard info from prmon json
[2026-05-30 20:12:00] 2026-05-30 18:09:31,613 | INFO     | extracted standard memory fields from prmon json
[2026-05-30 20:12:00] 2026-05-30 18:09:31,613 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-30 20:12:00] 2026-05-30 18:09:31,613 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-30 20:12:00] 2026-05-30 18:09:31,613 | INFO     | fitting pss+swap vs Time
[2026-05-30 20:12:00] 2026-05-30 18:09:31,614 | INFO     | sum of square deviations: 2474465.0
[2026-05-30 20:12:00] 2026-05-30 18:09:31,614 | INFO     | sum of deviations: 91927152.5
[2026-05-30 20:12:00] 2026-05-30 18:09:31,614 | INFO     | mean x (centered): 0.0
[2026-05-30 20:12:00] 2026-05-30 18:09:31,614 | INFO     | mean y: 2792557.65
[2026-05-30 20:12:00] 2026-05-30 18:09:31,614 | INFO     | intersect: 2792557.65
[2026-05-30 20:12:00] 2026-05-30 18:09:31,614 | INFO     | chi2: 0.00010084125624108679
[2026-05-30 20:12:00] 2026-05-30 18:09:31,614 | INFO     | current memory leak: 37.15 B/s (using 20 data points, chi2=0.00)
[2026-05-30 20:12:00] 2026-05-30 18:09:31,614 | INFO     | could have reported an average CPU frequency of 3658 MHz (4 samples)
[2026-05-30 20:12:00] 2026-05-30 18:09:31,614 | INFO     | ..............................
[2026-05-30 20:12:00] 2026-05-30 18:09:31,614 | INFO     | . Timing measurements:
[2026-05-30 20:12:00] 2026-05-30 18:09:31,614 | INFO     | . get job = 0 s
[2026-05-30 20:12:00] 2026-05-30 18:09:31,615 | INFO     | . initial setup = 3 s
[2026-05-30 20:12:00] 2026-05-30 18:09:31,615 | INFO     | . payload setup = 4 s
[2026-05-30 20:12:00] 2026-05-30 18:09:31,615 | INFO     | . stage-in = 0 s
[2026-05-30 20:12:00] 2026-05-30 18:09:31,615 | INFO     | . payload execution = 1598 s
[2026-05-30 20:12:00] 2026-05-30 18:09:31,615 | INFO     | . stage-out = 0 s
[2026-05-30 20:12:00] 2026-05-30 18:09:31,615 | INFO     | . log creation = 0 s
[2026-05-30 20:12:00] 2026-05-30 18:09:31,615 | INFO     | ..............................
[2026-05-30 20:12:00] 2026-05-30 18:09:32,084 | INFO     | 
[2026-05-30 20:12:00] 2026-05-30 18:09:32,084 | INFO     | job summary report
[2026-05-30 20:12:00] 2026-05-30 18:09:32,084 | INFO     | --------------------------------------------------
[2026-05-30 20:12:00] 2026-05-30 18:09:32,084 | INFO     | PanDA job id: 7158816558
[2026-05-30 20:12:00] 2026-05-30 18:09:32,084 | INFO     | task id: 50533925
[2026-05-30 20:12:00] 2026-05-30 18:09:32,084 | INFO     | errors: (none)
[2026-05-30 20:12:00] 2026-05-30 18:09:32,084 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-30 20:12:00] 2026-05-30 18:09:32,084 | INFO     | pilot state: finished 
[2026-05-30 20:12:00] 2026-05-30 18:09:32,084 | INFO     | transexitcode: 0
[2026-05-30 20:12:00] 2026-05-30 18:09:32,084 | INFO     | exeerrorcode: 0
[2026-05-30 20:12:00] 2026-05-30 18:09:32,084 | INFO     | exeerrordiag: 
[2026-05-30 20:12:00] 2026-05-30 18:09:32,084 | INFO     | exitcode: 0
[2026-05-30 20:12:00] 2026-05-30 18:09:32,084 | INFO     | exitmsg: OK
[2026-05-30 20:12:00] 2026-05-30 18:09:32,084 | INFO     | cpuconsumptiontime: 17147 s
[2026-05-30 20:12:00] 2026-05-30 18:09:32,085 | INFO     | nevents: 400
[2026-05-30 20:12:00] 2026-05-30 18:09:32,085 | INFO     | neventsw: 0
[2026-05-30 20:12:00] 2026-05-30 18:09:32,085 | INFO     | pid: 1152820
[2026-05-30 20:12:00] 2026-05-30 18:09:32,085 | INFO     | pgrp: 1152820
[2026-05-30 20:12:00] 2026-05-30 18:09:32,085 | INFO     | corecount: 12
[2026-05-30 20:12:00] 2026-05-30 18:09:32,085 | INFO     | event service: False
[2026-05-30 20:12:00] 2026-05-30 18:09:32,085 | INFO     | sizes: {0: 2265669, 1: 2267498, 11: 2267498, 1607: 2292296, 1608: 2301374, 1610: 2301512}
[2026-05-30 20:12:00] 2026-05-30 18:09:32,085 | INFO     | --------------------------------------------------
[2026-05-30 20:12:00] 2026-05-30 18:09:32,085 | INFO     | 
[2026-05-30 20:12:00] 2026-05-30 18:09:32,085 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot216/slots/1
[2026-05-30 20:12:00] 2026-05-30 18:09:32,100 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-30 20:12:00] 2026-05-30 18:09:32,101 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-30 20:12:00] 2026-05-30 18:09:32,101 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-30 20:12:00] 2026-05-30 18:09:32,101 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-30 20:12:00] 2026-05-30 18:09:32,101 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-30 20:12:00] 2026-05-30 18:09:32,101 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-30 20:12:00] 2026-05-30 18:09:32,101 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-30 20:12:00] 2026-05-30 18:09:32,101 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-30 20:12:00] 2026-05-30 18:09:32,101 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-30 20:12:00] 2026-05-30 18:09:32,101 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-30 20:12:00] 2026-05-30 18:09:32,101 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-30 20:12:00] 2026-05-30 18:09:32,101 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-30 20:12:00] 2026-05-30 18:09:32,101 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-30 20:12:00] 2026-05-30 18:09:32,101 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-30 20:12:00] 2026-05-30 18:09:32,101 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-30 20:12:00] 2026-05-30 18:09:32,101 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-30 20:12:00] 2026-05-30 18:09:32,101 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-30 20:12:00] 2026-05-30 18:09:32,101 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-30 20:12:00] 2026-05-30 18:09:32,101 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-30 20:12:00] 2026-05-30 18:09:32,101 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-30 20:12:00] 2026-05-30 18:09:32,101 | INFO     | job 7158816558 has completed (purged errors)
[2026-05-30 20:12:00] 2026-05-30 18:09:32,101 | INFO     | overall cleanup function is called
[2026-05-30 20:12:00] 2026-05-30 18:09:33,109 | INFO     | --- collectZombieJob: --- 10, [1152820]
[2026-05-30 20:12:00] 2026-05-30 18:09:33,109 | INFO     | zombie collector waiting for pid 1152820
[2026-05-30 20:12:00] 2026-05-30 18:09:33,109 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-30 20:12:00] 2026-05-30 18:09:33,109 | INFO     | collected zombie processes
[2026-05-30 20:12:00] 2026-05-30 18:09:33,109 | INFO     | will attempt to kill all subprocesses of pid=1152820
[2026-05-30 20:12:00] 2026-05-30 18:09:33,387 | INFO     | process IDs to be killed: [1152820] (in reverse order)
[2026-05-30 20:12:00] 2026-05-30 18:09:33,515 | WARNING  | found no corresponding commands to process id(s)
[2026-05-30 20:12:00] 2026-05-30 18:09:33,516 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-30 20:12:00] 2026-05-30 18:09:33,540 | INFO     | did not find any defunct processes belonging to 1152820
[2026-05-30 20:12:00] 2026-05-30 18:09:33,561 | INFO     | did not find any defunct processes belonging to 1152820
[2026-05-30 20:12:00] 2026-05-30 18:09:33,561 | INFO     | Ready for new job
[2026-05-30 20:12:00] 2026-05-30 18:09:33,562 | INFO     | ***************************************
[2026-05-30 20:12:00] 2026-05-30 18:09:33,562 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-30 20:12:00] 2026-05-30 18:09:33,562 | INFO     | ***************************************
[2026-05-30 20:12:00] 2026-05-30 18:09:33,562 | INFO     | 
[2026-05-30 20:12:00] 2026-05-30 18:09:33,567 | INFO     | architecture information:
[2026-05-30 20:12:00] 2026-05-30 18:09:33,568 | INFO     | executing command: cat /etc/os-release
[2026-05-30 20:12:00] 2026-05-30 18:09:33,580 | INFO     | cat /etc/os-release:
[2026-05-30 20:12:00] NAME="CentOS Linux"
[2026-05-30 20:12:00] VERSION="7 (Core)"
[2026-05-30 20:12:00] ID="centos"
[2026-05-30 20:12:00] ID_LIKE="rhel fedora"
[2026-05-30 20:12:00] VERSION_ID="7"
[2026-05-30 20:12:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-30 20:12:00] ANSI_COLOR="0;31"
[2026-05-30 20:12:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-30 20:12:00] HOME_URL="https://www.centos.org/"
[2026-05-30 20:12:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-30 20:12:00] 
[2026-05-30 20:12:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-30 20:12:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-30 20:12:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-30 20:12:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-30 20:12:00] 
[2026-05-30 20:12:00] 2026-05-30 18:09:33,580 | INFO     | ***************************************
[2026-05-30 20:12:00] 2026-05-30 18:09:34,083 | INFO     | executing command: df -mP /var/lib/boinc/var/slot216/slots/1
[2026-05-30 20:12:00] 2026-05-30 18:09:34,096 | INFO     | sufficient remaining disk space (327938998272 B)
[2026-05-30 20:12:00] 2026-05-30 18:09:34,096 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-30 20:12:00] 2026-05-30 18:09:34,096 | INFO     | current server update state: UPDATING_FINAL
[2026-05-30 20:12:00] 2026-05-30 18:09:34,096 | INFO     | update_server=False
[2026-05-30 20:12:00] 2026-05-30 18:09:34,096 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-30 20:12:00] 2026-05-30 18:09:34,096 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-30 20:12:00] 2026-05-30 18:09:34,097 | INFO     | aborting loop
[2026-05-30 20:12:00] 2026-05-30 18:09:34,515 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-30 20:12:00] 2026-05-30 18:09:35,102 | INFO     | [job] retrieve thread has finished
[2026-05-30 20:12:00] 2026-05-30 18:09:35,102 | INFO     | [job] job monitor thread has finished
[2026-05-30 20:12:00] 2026-05-30 18:09:35,113 | INFO     | all data control threads have been joined
[2026-05-30 20:12:00] 2026-05-30 18:09:35,212 | INFO     | [payload] failed_post thread has finished
[2026-05-30 20:12:00] 2026-05-30 18:09:35,292 | INFO     | all payload control threads have been joined
[2026-05-30 20:12:00] 2026-05-30 18:09:35,376 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-30 20:12:00] 2026-05-30 18:09:35,542 | INFO     | all job control threads have been joined
[2026-05-30 20:12:00] 2026-05-30 18:09:35,798 | INFO     | [payload] validate_post thread has finished
[2026-05-30 20:12:00] 2026-05-30 18:09:36,074 | INFO     | [job] validate thread has finished
[2026-05-30 20:12:00] 2026-05-30 18:09:36,118 | INFO     | [data] control thread has finished
[2026-05-30 20:12:00] 2026-05-30 18:09:36,165 | INFO     | [job] create_data_payload thread has finished
[2026-05-30 20:12:00] 2026-05-30 18:09:36,204 | INFO     | [payload] validate_pre thread has finished
[2026-05-30 20:12:00] 2026-05-30 18:09:36,297 | INFO     | [payload] control thread has finished
[2026-05-30 20:12:00] 2026-05-30 18:09:36,381 | INFO     | [data] copytool_in thread has finished
[2026-05-30 20:12:00] 2026-05-30 18:09:36,440 | INFO     | [payload] execute_payloads thread has finished
[2026-05-30 20:12:00] 2026-05-30 18:09:36,520 | INFO     | [data] copytool_out thread has finished
[2026-05-30 20:12:00] 2026-05-30 18:09:36,547 | INFO     | [job] control thread has finished
[2026-05-30 20:12:00] 2026-05-30 18:09:36,672 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-30 20:12:00] 2026-05-30 18:09:37,677 | INFO     | [job] queue monitor thread has finished
[2026-05-30 20:12:00] 2026-05-30 18:09:39,381 | INFO     | [data] queue_monitor thread has finished
[2026-05-30 20:12:00] 2026-05-30 18:09:45,036 | INFO     | job.realtimelogging is not enabled
[2026-05-30 20:12:00] 2026-05-30 18:09:46,042 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-30 20:12:00] 2026-05-30 18:10:04,567 | INFO     | PID=1138516 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-30 20:12:00] 2026-05-30 18:10:04,567 | INFO     | .. there are 8 such processes running
[2026-05-30 20:12:00] 2026-05-30 18:10:04,568 | INFO     | found 0 job(s) in 20 queues
[2026-05-30 20:12:00] 2026-05-30 18:10:04,569 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-30 20:12:00] 2026-05-30 18:10:04,569 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-30 20:12:00] 2026-05-30 18:10:32,467 | INFO     | [monitor] cgroup control has ended
[2026-05-30 20:12:00] 2026-05-30 18:10:33,417 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22552137021248)>', '<ExcThread(monitor, started 22551891011328)>']
[2026-05-30 20:12:00] 2026-05-30 18:10:33,696 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-30 20:12:00] 2026-05-30 18:10:33,697 | INFO     | [monitor] control thread has ended
[2026-05-30 20:12:00] 2026-05-30 18:10:38,442 | INFO     | all workflow threads have been joined
[2026-05-30 20:12:00] 2026-05-30 18:10:38,445 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-30 20:12:00] 2026-05-30 18:10:38,445 | INFO     | traces error code: 0
[2026-05-30 20:12:00] 2026-05-30 18:10:38,445 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-30 20:12:00] 2026-05-30 18:10:38,581 [wrapper] ==== pilot stdout END ====
[2026-05-30 20:12:00] 2026-05-30 18:10:38,584 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-30 20:12:00] 2026-05-30 18:10:38,586 [wrapper] pilotpid: 1138516
[2026-05-30 20:12:00] 2026-05-30 18:10:38,587 [wrapper] Pilot exit status: 0
[2026-05-30 20:12:00] 2026-05-30 18:10:38,594 [wrapper] pandaids: 7158816558
[2026-05-30 20:12:00] 2026-05-30 18:10:38,687 [wrapper] cleanup supervisor_pilot 1254280 1138517
[2026-05-30 20:12:00] 2026-05-30 18:10:38,689 [wrapper] Test setup, not cleaning
[2026-05-30 20:12:00] 2026-05-30 18:10:38,691 [wrapper] apfmon messages muted
[2026-05-30 20:12:00] 2026-05-30 18:10:38,692 [wrapper] ==== wrapper stdout END ====
[2026-05-30 20:12:00] 2026-05-30 18:10:38,694 [wrapper] ==== wrapper stderr END ====
[2026-05-30 20:12:00]  *** Error codes and diagnostics ***
[2026-05-30 20:12:00]     "exeErrorCode": 0,
[2026-05-30 20:12:00]     "pilotErrorCode": 0,
[2026-05-30 20:12:00]  *** Listing of results directory ***
[2026-05-30 20:12:00] total 504500
[2026-05-30 20:12:00] -rwx------. 1 boinc boinc     36281 May 30 14:13 runpilot2-wrapper.sh
[2026-05-30 20:12:00] -rw-r--r--. 1 boinc boinc      5631 May 30 14:13 queuedata.json
[2026-05-30 20:12:00] -rw-r--r--. 1 boinc boinc    683926 May 30 14:13 pilot3.tar.gz
[2026-05-30 20:12:00] -rw-r--r--. 1 boinc boinc       100 May 30 18:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-30 20:12:00] -rwxr-xr-x. 1 boinc boinc      7986 May 30 18:42 run_atlas
[2026-05-30 20:12:00] -rw-r--r--. 1 boinc boinc       105 May 30 18:42 job.xml
[2026-05-30 20:12:00] -rw-r--r--. 1 boinc boinc      6629 May 30 19:42 init_data.xml
[2026-05-30 20:12:00] -rw-r--r--. 2 boinc boinc 294097965 May 30 19:42 EVNT.50469837._000299.pool.root.1
[2026-05-30 20:12:00] -rw-r--r--. 2 boinc boinc     15667 May 30 19:42 start_atlas.sh
[2026-05-30 20:12:00] drwxrwx--x. 2 boinc boinc      4096 May 30 19:42 shared
[2026-05-30 20:12:00] -rw-r--r--. 2 boinc boinc    697413 May 30 19:42 input.tar.gz
[2026-05-30 20:12:00] -rw-r--r--. 1 boinc boinc         0 May 30 19:42 boinc_lockfile
[2026-05-30 20:12:00] -rw-r--r--. 1 boinc boinc      2513 May 30 19:42 pandaJob.out
[2026-05-30 20:12:00] -rw-------. 1 boinc boinc    995580 May 30 19:42 agis_schedconf.cvmfs.json
[2026-05-30 20:12:00] -rw-------. 1 boinc boinc   1502789 May 30 19:42 agis_ddmendpoints.agis.ALL.json
[2026-05-30 20:12:00] -rw-------. 1 boinc boinc       444 May 30 19:42 workernode_map.json
[2026-05-30 20:12:00] drwx------. 5 boinc boinc      4096 May 30 19:42 pilot3
[2026-05-30 20:12:00] -rw-------. 1 boinc boinc 217333857 May 30 20:09 HITS.50533925._012561.pool.root.1
[2026-05-30 20:12:00] -rw-r--r--. 1 boinc boinc       486 May 30 20:09 boinc_task_state.xml
[2026-05-30 20:12:00] -rw-------. 1 boinc boinc      1030 May 30 20:09 memory_monitor_summary.json
[2026-05-30 20:12:00] -rw-------. 1 boinc boinc    323096 May 30 20:09 log.50533925._012561.job.log.tgz.1
[2026-05-30 20:12:00] -rw-------. 1 boinc boinc      6374 May 30 20:09 heartbeat_new.json
[2026-05-30 20:12:00] -rw-------. 1 boinc boinc      6265 May 30 20:09 heartbeat.json
[2026-05-30 20:12:00] -rw-------. 1 boinc boinc        95 May 30 20:10 pilot_heartbeat.json
[2026-05-30 20:12:00] -rw-------. 1 boinc boinc      4905 May 30 20:10 pilotlog.txt
[2026-05-30 20:12:00] -rw-------. 1 boinc boinc    199158 May 30 20:10 log.50533925._012561.job.log.1
[2026-05-30 20:12:00] -rw-------. 1 boinc boinc       357 May 30 20:10 output.list
[2026-05-30 20:12:00] -rw-r--r--. 1 boinc boinc       410 May 30 20:10 runtime_log
[2026-05-30 20:12:00] -rw-------. 1 boinc boinc    542720 May 30 20:10 result.tar.gz
[2026-05-30 20:12:00] -rw-r--r--. 1 boinc boinc      8846 May 30 20:10 runtime_log.err
[2026-05-30 20:12:00] -rw-------. 1 boinc boinc       657 May 30 20:10 d47f5b35fbc4.diag
[2026-05-30 20:12:00] -rw-r--r--. 1 boinc boinc        26 May 30 20:11 wrapper_checkpoint.txt
[2026-05-30 20:12:00] -rw-r--r--. 1 boinc boinc      8192 May 30 20:11 boinc_mmap_file
[2026-05-30 20:12:00] -rw-r--r--. 1 boinc boinc     21145 May 30 20:12 stderr.txt
[2026-05-30 20:12:00] HITS file was successfully produced:
[2026-05-30 20:12:00] -rw-------. 1 boinc boinc 217333857 May 30 20:09 shared/HITS.pool.root.1
[2026-05-30 20:12:00]  *** Contents of shared directory: ***
[2026-05-30 20:12:00] total 500692
[2026-05-30 20:12:00] -rw-r--r--. 2 boinc boinc 294097965 May 30 19:42 ATLAS.root_0
[2026-05-30 20:12:00] -rw-r--r--. 2 boinc boinc     15667 May 30 19:42 start_atlas.sh
[2026-05-30 20:12:00] -rw-r--r--. 2 boinc boinc    697413 May 30 19:42 input.tar.gz
[2026-05-30 20:12:00] -rw-------. 1 boinc boinc 217333857 May 30 20:09 HITS.pool.root.1
[2026-05-30 20:12:00] -rw-------. 1 boinc boinc    542720 May 30 20:10 result.tar.gz
20:12:01 (1130726): run_atlas exited; CPU time 17190.390997
20:12:01 (1130726): called boinc_finish(0)

</stderr_txt>
]]>

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