Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:50:32 (32602): wrapper (7.7.26015): starting
08:50:32 (32602): wrapper: running run_atlas (--nthreads 8)
[2026-05-31 08:50:32] Arguments: --nthreads 8
[2026-05-31 08:50:32] Threads: 8
[2026-05-31 08:50:32] Checking for CVMFS
[2026-05-31 08:50:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-31 08:50:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-31 08:50:36] Running cvmfs_config stat atlas.cern.ch
[2026-05-31 08:50:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-31 08:50:37] 2.11.2.0 28827 65641 128788 159988 0 53 14051543 25165824 96 130560 0 26374268 99.875 19567732 6049 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-31 08:50:37] CVMFS is ok
[2026-05-31 08:50:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-31 08:50:37] Checking for apptainer binary...
[2026-05-31 08:50:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-31 08:50:37] Running /usr/bin/apptainer --version
[2026-05-31 08:50:37] apptainer version 1.3.2-1.el7
[2026-05-31 08:50:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-31 08:50:49] cg-vwn243.simple-grid.lan
[2026-05-31 08:50:49] apptainer works
[2026-05-31 08:50:49] Set ATHENA_PROC_NUMBER=8
[2026-05-31 08:50:49] Set ATHENA_CORE_NUMBER=8
[2026-05-31 08:50:49] Starting ATLAS job with PandaID=7159492459
[2026-05-31 08:50:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-31 14:42:57]  *** The last 200 lines of the pilot log: ***
[2026-05-31 14:42:57] 2026-05-31 12:42:13,865 | INFO     | mean y: 2468217.1856287424
[2026-05-31 14:42:57] 2026-05-31 12:42:13,865 | INFO     | intersect: 2468217.1856287424
[2026-05-31 14:42:57] 2026-05-31 12:42:13,866 | INFO     | chi2: 10.624751537761206
[2026-05-31 14:42:57] 2026-05-31 12:42:13,866 | INFO     | sum of square deviations: 11042365180.0
[2026-05-31 14:42:57] 2026-05-31 12:42:13,870 | INFO     | sum of deviations: 247469128682.00003
[2026-05-31 14:42:57] 2026-05-31 12:42:13,870 | INFO     | mean x (centered): 0.0
[2026-05-31 14:42:57] 2026-05-31 12:42:13,870 | INFO     | mean y: 2480783.100303951
[2026-05-31 14:42:57] 2026-05-31 12:42:13,870 | INFO     | intersect: 2480783.100303951
[2026-05-31 14:42:57] 2026-05-31 12:42:13,871 | INFO     | chi2: 9.128885091798985
[2026-05-31 14:42:57] 2026-05-31 12:42:13,871 | INFO     | current chi2=9.128885091798985 (change=14.079072255438573 %)
[2026-05-31 14:42:57] 2026-05-31 12:42:13,871 | INFO     | right removable region: 328
[2026-05-31 14:42:57] 2026-05-31 12:42:13,872 | INFO     | sum of square deviations: 11042365180.0
[2026-05-31 14:42:57] 2026-05-31 12:42:13,876 | INFO     | sum of deviations: 82520922670.99998
[2026-05-31 14:42:57] 2026-05-31 12:42:13,876 | INFO     | mean x (centered): 0.0
[2026-05-31 14:42:57] 2026-05-31 12:42:13,876 | INFO     | mean y: 2504731.4924012157
[2026-05-31 14:42:57] 2026-05-31 12:42:13,876 | INFO     | intersect: 2504731.4924012157
[2026-05-31 14:42:57] 2026-05-31 12:42:13,877 | INFO     | chi2: 5.327060870984613
[2026-05-31 14:42:57] 2026-05-31 12:42:13,877 | INFO     | current chi2=5.327060870984613 (change=49.86178404217908 %)
[2026-05-31 14:42:57] 2026-05-31 12:42:13,878 | INFO     | sum of square deviations: 10546523325.0
[2026-05-31 14:42:57] 2026-05-31 12:42:13,882 | INFO     | sum of deviations: -13852701852.999992
[2026-05-31 14:42:57] 2026-05-31 12:42:13,882 | INFO     | mean x (centered): 0.0
[2026-05-31 14:42:57] 2026-05-31 12:42:13,882 | INFO     | mean y: 2534350.4444444445
[2026-05-31 14:42:57] 2026-05-31 12:42:13,882 | INFO     | intersect: 2534350.4444444445
[2026-05-31 14:42:57] 2026-05-31 12:42:13,883 | INFO     | chi2: 2.258248798389806
[2026-05-31 14:42:57] 2026-05-31 12:42:13,883 | INFO     | current chi2=2.258248798389806 (change=57.60797833773563 %)
[2026-05-31 14:42:57] 2026-05-31 12:42:13,884 | INFO     | sum of square deviations: 10065751520.0
[2026-05-31 14:42:57] 2026-05-31 12:42:13,887 | INFO     | sum of deviations: -50462376818.99999
[2026-05-31 14:42:57] 2026-05-31 12:42:13,888 | INFO     | mean x (centered): 0.0
[2026-05-31 14:42:57] 2026-05-31 12:42:13,888 | INFO     | mean y: 2545921.015673981
[2026-05-31 14:42:57] 2026-05-31 12:42:13,888 | INFO     | intersect: 2545921.015673981
[2026-05-31 14:42:57] 2026-05-31 12:42:13,888 | INFO     | chi2: 1.7085995012256856
[2026-05-31 14:42:57] 2026-05-31 12:42:13,889 | INFO     | current chi2=1.7085995012256856 (change=24.33962535731384 %)
[2026-05-31 14:42:57] 2026-05-31 12:42:13,889 | INFO     | left removable region: 15
[2026-05-31 14:42:57] 2026-05-31 12:42:13,889 | INFO     | sum of square deviations: 9508390372.0
[2026-05-31 14:42:57] 2026-05-31 12:42:13,893 | INFO     | sum of deviations: -6048206730.000001
[2026-05-31 14:42:57] 2026-05-31 12:42:13,893 | INFO     | mean x (centered): 0.0
[2026-05-31 14:42:57] 2026-05-31 12:42:13,893 | INFO     | mean y: 2560321.8306709267
[2026-05-31 14:42:57] 2026-05-31 12:42:13,894 | INFO     | intersect: 2560321.8306709267
[2026-05-31 14:42:57] 2026-05-31 12:42:13,894 | INFO     | chi2: 0.06626393678497239
[2026-05-31 14:42:57] 2026-05-31 12:42:13,894 | INFO     | current memory leak: -0.64 B/s (using 313 data points, chi2=0.07)
[2026-05-31 14:42:57] 2026-05-31 12:42:13,895 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-05-31 14:42:57] 2026-05-31 12:42:13,895 | INFO     | ..............................
[2026-05-31 14:42:57] 2026-05-31 12:42:13,895 | INFO     | . Timing measurements:
[2026-05-31 14:42:57] 2026-05-31 12:42:13,896 | INFO     | . get job = 0 s
[2026-05-31 14:42:57] 2026-05-31 12:42:13,896 | INFO     | . initial setup = 129 s
[2026-05-31 14:42:57] 2026-05-31 12:42:13,896 | INFO     | . payload setup = 235 s
[2026-05-31 14:42:57] 2026-05-31 12:42:13,896 | INFO     | . stage-in = 0 s
[2026-05-31 14:42:57] 2026-05-31 12:42:13,896 | INFO     | . payload execution = 20445 s
[2026-05-31 14:42:57] 2026-05-31 12:42:13,896 | INFO     | . stage-out = 3 s
[2026-05-31 14:42:57] 2026-05-31 12:42:13,896 | INFO     | . log creation = 1 s
[2026-05-31 14:42:57] 2026-05-31 12:42:13,897 | INFO     | ..............................
[2026-05-31 14:42:57] 2026-05-31 12:42:14,503 | INFO     | 
[2026-05-31 14:42:57] 2026-05-31 12:42:14,503 | INFO     | job summary report
[2026-05-31 14:42:57] 2026-05-31 12:42:14,503 | INFO     | --------------------------------------------------
[2026-05-31 14:42:57] 2026-05-31 12:42:14,503 | INFO     | PanDA job id: 7159492459
[2026-05-31 14:42:57] 2026-05-31 12:42:14,504 | INFO     | task id: 50533997
[2026-05-31 14:42:57] 2026-05-31 12:42:14,504 | INFO     | errors: (none)
[2026-05-31 14:42:57] 2026-05-31 12:42:14,504 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-31 14:42:57] 2026-05-31 12:42:14,504 | INFO     | pilot state: finished 
[2026-05-31 14:42:57] 2026-05-31 12:42:14,504 | INFO     | transexitcode: 0
[2026-05-31 14:42:57] 2026-05-31 12:42:14,504 | INFO     | exeerrorcode: 0
[2026-05-31 14:42:57] 2026-05-31 12:42:14,504 | INFO     | exeerrordiag: 
[2026-05-31 14:42:57] 2026-05-31 12:42:14,504 | INFO     | exitcode: 0
[2026-05-31 14:42:57] 2026-05-31 12:42:14,504 | INFO     | exitmsg: OK
[2026-05-31 14:42:57] 2026-05-31 12:42:14,504 | INFO     | cpuconsumptiontime: 77067 s
[2026-05-31 14:42:57] 2026-05-31 12:42:14,504 | INFO     | nevents: 400
[2026-05-31 14:42:57] 2026-05-31 12:42:14,505 | INFO     | neventsw: 0
[2026-05-31 14:42:57] 2026-05-31 12:42:14,505 | INFO     | pid: 8662
[2026-05-31 14:42:57] 2026-05-31 12:42:14,505 | INFO     | pgrp: 8662
[2026-05-31 14:42:57] 2026-05-31 12:42:14,505 | INFO     | corecount: 8
[2026-05-31 14:42:57] 2026-05-31 12:42:14,505 | INFO     | event service: False
[2026-05-31 14:42:57] 2026-05-31 12:42:14,505 | INFO     | sizes: {0: 2265101, 1: 2266159, 2: 2267615, 12: 2267615, 20684: 2301105, 20685: 2301104, 20689: 2310342, 20690: 2310480}
[2026-05-31 14:42:57] 2026-05-31 12:42:14,505 | INFO     | --------------------------------------------------
[2026-05-31 14:42:57] 2026-05-31 12:42:14,505 | INFO     | 
[2026-05-31 14:42:57] 2026-05-31 12:42:14,505 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-05-31 14:42:57] 2026-05-31 12:42:14,557 | WARNING  | process 8662 can no longer be monitored (due to stat problems) - aborting
[2026-05-31 14:42:57] 2026-05-31 12:42:14,558 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-7159492459/memory_monitor_summary.json (trf name=prmon)
[2026-05-31 14:42:57] 2026-05-31 12:42:14,564 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3579362 B
[2026-05-31 14:42:57] 2026-05-31 12:42:14,565 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16072 B
[2026-05-31 14:42:57] 2026-05-31 12:42:14,565 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-05-31 14:42:57] 2026-05-31 12:42:14,915 | INFO     | sufficient remaining disk space (497033412608 B)
[2026-05-31 14:42:57] 2026-05-31 12:42:14,916 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-05-31 14:42:57] 2026-05-31 12:42:14,927 | INFO     | size of work directory /var/lib/boinc/slots/9/PanDA_Pilot-7159492459: 3975906 B (within 5033164800 B limit)
[2026-05-31 14:42:57] 2026-05-31 12:42:14,927 | INFO     | pfn file=/var/lib/boinc/slots/9/PanDA_Pilot-7159492459/HITS.50533997._005871.pool.root.1 does not exist (skip from workdir size calculation)
[2026-05-31 14:42:57] 2026-05-31 12:42:14,928 | INFO     | total size of present files: 0 B (workdir size: 3975906 B)
[2026-05-31 14:42:57] 2026-05-31 12:42:14,928 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/9/PanDA_Pilot-7159492459/HITS.50533997._005871.pool.root.1 since it does not exist
[2026-05-31 14:42:57] 2026-05-31 12:42:15,004 | INFO     | number of running child processes to parent process 8662: 1
[2026-05-31 14:42:57] 2026-05-31 12:42:15,004 | INFO     | maximum number of monitored processes: 8
[2026-05-31 14:42:57] 2026-05-31 12:42:15,004 | INFO     | aborting job monitoring since job object (job id=7159492459) has expired
[2026-05-31 14:42:57] 2026-05-31 12:42:15,129 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-31 14:42:57] 2026-05-31 12:42:15,130 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-31 14:42:57] 2026-05-31 12:42:15,130 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-31 14:42:57] 2026-05-31 12:42:15,130 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-31 14:42:57] 2026-05-31 12:42:15,130 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-31 14:42:57] 2026-05-31 12:42:15,130 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-31 14:42:57] 2026-05-31 12:42:15,130 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-31 14:42:57] 2026-05-31 12:42:15,130 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-31 14:42:57] 2026-05-31 12:42:15,130 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-31 14:42:57] 2026-05-31 12:42:15,131 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-31 14:42:57] 2026-05-31 12:42:15,131 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-31 14:42:57] 2026-05-31 12:42:15,131 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-31 14:42:57] 2026-05-31 12:42:15,131 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-31 14:42:57] 2026-05-31 12:42:15,131 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-31 14:42:57] 2026-05-31 12:42:15,131 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-31 14:42:57] 2026-05-31 12:42:15,131 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-31 14:42:57] 2026-05-31 12:42:15,131 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-31 14:42:57] 2026-05-31 12:42:15,131 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-31 14:42:57] 2026-05-31 12:42:15,132 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-31 14:42:57] 2026-05-31 12:42:15,132 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-31 14:42:57] 2026-05-31 12:42:15,132 | INFO     | job 7159492459 has completed (purged errors)
[2026-05-31 14:42:57] 2026-05-31 12:42:15,132 | INFO     | overall cleanup function is called
[2026-05-31 14:42:57] 2026-05-31 12:42:16,141 | INFO     | --- collectZombieJob: --- 10, [8662]
[2026-05-31 14:42:57] 2026-05-31 12:42:16,141 | INFO     | zombie collector waiting for pid 8662
[2026-05-31 14:42:57] 2026-05-31 12:42:16,141 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-31 14:42:57] 2026-05-31 12:42:16,142 | INFO     | collected zombie processes
[2026-05-31 14:42:57] 2026-05-31 12:42:16,142 | INFO     | will attempt to kill all subprocesses of pid=8662
[2026-05-31 14:42:57] 2026-05-31 12:42:16,213 | INFO     | process IDs to be killed: [8662] (in reverse order)
[2026-05-31 14:42:57] 2026-05-31 12:42:17,175 | WARNING  | found no corresponding commands to process id(s)
[2026-05-31 14:42:57] 2026-05-31 12:42:17,175 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-31 14:42:57] 2026-05-31 12:42:17,177 | INFO     | did not find any defunct processes belonging to 8662
[2026-05-31 14:42:57] 2026-05-31 12:42:17,179 | INFO     | did not find any defunct processes belonging to 8662
[2026-05-31 14:42:57] 2026-05-31 12:42:17,179 | INFO     | Ready for new job
[2026-05-31 14:42:57] 2026-05-31 12:42:17,182 | INFO     | ***************************************
[2026-05-31 14:42:57] 2026-05-31 12:42:17,182 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-31 14:42:57] 2026-05-31 12:42:17,182 | INFO     | ***************************************
[2026-05-31 14:42:57] 2026-05-31 12:42:17,182 | INFO     | 
[2026-05-31 14:42:57] 2026-05-31 12:42:17,183 | INFO     | pilot is running in a VM
[2026-05-31 14:42:57] 2026-05-31 12:42:17,183 | INFO     | architecture information:
[2026-05-31 14:42:57] 2026-05-31 12:42:17,188 | INFO     | executing command: cat /etc/os-release
[2026-05-31 14:42:57] 2026-05-31 12:42:17,528 | INFO     | cat /etc/os-release:
[2026-05-31 14:42:57] NAME="CentOS Linux"
[2026-05-31 14:42:57] VERSION="7 (Core)"
[2026-05-31 14:42:57] ID="centos"
[2026-05-31 14:42:57] ID_LIKE="rhel fedora"
[2026-05-31 14:42:57] VERSION_ID="7"
[2026-05-31 14:42:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-31 14:42:57] ANSI_COLOR="0;31"
[2026-05-31 14:42:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-31 14:42:57] HOME_URL="https://www.centos.org/"
[2026-05-31 14:42:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-31 14:42:57] 
[2026-05-31 14:42:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-31 14:42:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-31 14:42:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-31 14:42:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-31 14:42:57] 
[2026-05-31 14:42:57] 2026-05-31 12:42:17,529 | INFO     | ***************************************
[2026-05-31 14:42:57] 2026-05-31 12:42:18,032 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-05-31 14:42:57] 2026-05-31 12:42:18,276 | INFO     | sufficient remaining disk space (497039704064 B)
[2026-05-31 14:42:57] 2026-05-31 12:42:18,277 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-31 14:42:57] 2026-05-31 12:42:18,277 | INFO     | current server update state: UPDATING_FINAL
[2026-05-31 14:42:57] 2026-05-31 12:42:18,277 | INFO     | update_server=False
[2026-05-31 14:42:57] 2026-05-31 12:42:18,277 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-31 14:42:57] 2026-05-31 12:42:18,516 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-31 14:42:57] 2026-05-31 12:42:18,516 | INFO     | aborting loop
[2026-05-31 14:42:57] 2026-05-31 12:42:18,901 | INFO     | all data control threads have been joined
[2026-05-31 14:42:57] 2026-05-31 12:42:19,042 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-31 14:42:57] 2026-05-31 12:42:19,225 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-31 14:42:57] 2026-05-31 12:42:19,283 | INFO     | [job] retrieve thread has finished
[2026-05-31 14:42:57] 2026-05-31 12:42:19,508 | INFO     | all payload control threads have been joined
[2026-05-31 14:42:57] 2026-05-31 12:42:19,522 | INFO     | [job] job monitor thread has finished
[2026-05-31 14:42:57] 2026-05-31 12:42:19,730 | INFO     | [payload] validate_post thread has finished
[2026-05-31 14:42:57] 2026-05-31 12:42:19,733 | INFO     | [job] create_data_payload thread has finished
[2026-05-31 14:42:57] 2026-05-31 12:42:19,857 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-31 14:42:57] 2026-05-31 12:42:19,907 | INFO     | [data] control thread has finished
[2026-05-31 14:42:57] 2026-05-31 12:42:19,908 | INFO     | all job control threads have been joined
[2026-05-31 14:42:57] 2026-05-31 12:42:20,048 | INFO     | [job] queue monitor thread has finished
[2026-05-31 14:42:57] 2026-05-31 12:42:20,151 | INFO     | [payload] execute_payloads thread has finished
[2026-05-31 14:42:57] 2026-05-31 12:42:20,165 | INFO     | [payload] validate_pre thread has finished
[2026-05-31 14:42:57] 2026-05-31 12:42:20,469 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-31 14:42:57] 2026-05-31 12:42:20,514 | INFO     | [payload] control thread has finished
[2026-05-31 14:42:57] 2026-05-31 12:42:20,553 | INFO     | [payload] failed_post thread has finished
[2026-05-31 14:42:57] 2026-05-31 12:42:20,624 | INFO     | [data] copytool_in thread has finished
[2026-05-31 14:42:57] 2026-05-31 12:42:20,638 | INFO     | [job] validate thread has finished
[2026-05-31 14:42:57] 2026-05-31 12:42:20,914 | INFO     | [job] control thread has finished
[2026-05-31 14:42:57] 2026-05-31 12:42:21,232 | INFO     | [data] copytool_out thread has finished
[2026-05-31 14:42:57] 2026-05-31 12:42:23,866 | INFO     | [data] queue_monitor thread has finished
[2026-05-31 14:42:57] 2026-05-31 12:42:46,975 | INFO     | [monitor] cgroup control has ended
[2026-05-31 14:42:57] 2026-05-31 12:42:47,312 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140259335034688)>', '<ExcThread(monitor, started 140259035690752)>']
[2026-05-31 14:42:57] 2026-05-31 12:42:47,796 | INFO     | PID=4187 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-05-31 14:42:57] 2026-05-31 12:42:47,796 | INFO     | .. there are 2 such processes running
[2026-05-31 14:42:57] 2026-05-31 12:42:47,799 | INFO     | found 0 job(s) in 20 queues
[2026-05-31 14:42:57] 2026-05-31 12:42:47,799 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-31 14:42:57] 2026-05-31 12:42:47,799 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-31 14:42:57] 2026-05-31 12:42:47,799 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-31 14:42:57] 2026-05-31 12:42:47,799 | INFO     | [monitor] control thread has ended
[2026-05-31 14:42:57] 2026-05-31 12:42:52,338 | INFO     | all workflow threads have been joined
[2026-05-31 14:42:57] 2026-05-31 12:42:52,338 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-31 14:42:57] 2026-05-31 12:42:52,339 | INFO     | traces error code: 0
[2026-05-31 14:42:57] 2026-05-31 12:42:52,339 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-31 14:42:57] 2026-05-31 12:42:52,881 [wrapper] ==== pilot stdout END ====
[2026-05-31 14:42:57] 2026-05-31 12:42:52,970 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-31 14:42:57] 2026-05-31 12:42:53,077 [wrapper] pilotpid: 4187
[2026-05-31 14:42:57] 2026-05-31 12:42:53,163 [wrapper] Pilot exit status: 0
[2026-05-31 14:42:57] 2026-05-31 12:42:53,681 [wrapper] pandaids: 7159492459
[2026-05-31 14:42:57] 2026-05-31 12:42:54,963 [wrapper] cleanup supervisor_pilot 16687 4188
[2026-05-31 14:42:57] 2026-05-31 12:42:55,032 [wrapper] Test setup, not cleaning
[2026-05-31 14:42:57] 2026-05-31 12:42:55,149 [wrapper] apfmon messages muted
[2026-05-31 14:42:57] 2026-05-31 12:42:55,239 [wrapper] ==== wrapper stdout END ====
[2026-05-31 14:42:57] 2026-05-31 12:42:55,350 [wrapper] ==== wrapper stderr END ====
[2026-05-31 14:42:57]  *** Error codes and diagnostics ***
[2026-05-31 14:42:57]     "exeErrorCode": 0,
[2026-05-31 14:42:57]     "pilotErrorCode": 0,
[2026-05-31 14:42:57]  *** Listing of results directory ***
[2026-05-31 14:42:57] total 555660
[2026-05-31 14:42:57] -rw-r--r--. 1 boinc boinc    683926 May 30 18:13 pilot3.tar.gz
[2026-05-31 14:42:57] -rwx------. 1 boinc boinc     36281 May 30 18:17 runpilot2-wrapper.sh
[2026-05-31 14:42:57] -rw-r--r--. 1 boinc boinc      5631 May 30 18:18 queuedata.json
[2026-05-31 14:42:57] -rw-r--r--. 1 boinc boinc       100 May 31 08:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-31 14:42:57] -rwxr-xr-x. 1 boinc boinc      7986 May 31 08:50 run_atlas
[2026-05-31 14:42:57] -rw-r--r--. 1 boinc boinc       105 May 31 08:50 job.xml
[2026-05-31 14:42:57] -rw-r--r--. 1 boinc boinc      6306 May 31 08:50 init_data.xml
[2026-05-31 14:42:57] -rw-r--r--. 2 boinc boinc 312779927 May 31 08:50 EVNT.50532964._000275.pool.root.1
[2026-05-31 14:42:57] -rw-r--r--. 2 boinc boinc     15667 May 31 08:50 start_atlas.sh
[2026-05-31 14:42:57] drwxrwx--x. 2 boinc boinc        68 May 31 08:50 shared
[2026-05-31 14:42:57] -rw-r--r--. 2 boinc boinc    697412 May 31 08:50 input.tar.gz
[2026-05-31 14:42:57] -rw-r--r--. 1 boinc boinc         0 May 31 08:50 boinc_lockfile
[2026-05-31 14:42:57] -rw-r--r--. 1 boinc boinc      2514 May 31 08:50 pandaJob.out
[2026-05-31 14:42:57] -rw-------. 1 boinc boinc       415 May 31 08:57 workernode_map.json
[2026-05-31 14:42:57] -rw-------. 1 boinc boinc    995580 May 31 08:57 agis_schedconf.cvmfs.json
[2026-05-31 14:42:57] drwx------. 5 boinc boinc      4096 May 31 08:57 pilot3
[2026-05-31 14:42:57] -rw-------. 1 boinc boinc 247369818 May 31 14:40 HITS.50533997._005871.pool.root.1
[2026-05-31 14:42:57] -rw-r--r--. 1 boinc boinc       489 May 31 14:40 boinc_task_state.xml
[2026-05-31 14:42:57] -rw-------. 1 boinc boinc      1015 May 31 14:42 memory_monitor_summary.json
[2026-05-31 14:42:57] -rw-------. 1 boinc boinc   1502789 May 31 14:42 agis_ddmendpoints.agis.ALL.json
[2026-05-31 14:42:57] -rw-------. 1 boinc boinc    461632 May 31 14:42 log.50533997._005871.job.log.tgz.1
[2026-05-31 14:42:57] -rw-------. 1 boinc boinc      6343 May 31 14:42 heartbeat_new.json
[2026-05-31 14:42:57] -rw-------. 1 boinc boinc      6234 May 31 14:42 heartbeat.json
[2026-05-31 14:42:57] -rw-r--r--. 1 boinc boinc        28 May 31 14:42 wrapper_checkpoint.txt
[2026-05-31 14:42:57] -rw-r--r--. 1 boinc boinc      8192 May 31 14:42 boinc_mmap_file
[2026-05-31 14:42:57] -rw-------. 1 boinc boinc        95 May 31 14:42 pilot_heartbeat.json
[2026-05-31 14:42:57] -rw-------. 1 boinc boinc      4882 May 31 14:42 pilotlog.txt
[2026-05-31 14:42:57] -rw-------. 1 boinc boinc   1902815 May 31 14:42 log.50533997._005871.job.log.1
[2026-05-31 14:42:57] -rw-------. 1 boinc boinc       357 May 31 14:42 output.list
[2026-05-31 14:42:57] -rw-r--r--. 1 boinc boinc       410 May 31 14:42 runtime_log
[2026-05-31 14:42:57] -rw-------. 1 boinc boinc   2385920 May 31 14:42 result.tar.gz
[2026-05-31 14:42:57] -rw-r--r--. 1 boinc boinc      8439 May 31 14:42 runtime_log.err
[2026-05-31 14:42:57] -rw-------. 1 boinc boinc       656 May 31 14:42 0d890bca08e1.diag
[2026-05-31 14:42:57] -rw-r--r--. 1 boinc boinc     21086 May 31 14:42 stderr.txt
[2026-05-31 14:42:58] HITS file was successfully produced:
[2026-05-31 14:42:58] -rw-------. 1 boinc boinc 247369818 May 31 14:40 shared/HITS.pool.root.1
[2026-05-31 14:42:58]  *** Contents of shared directory: ***
[2026-05-31 14:42:58] total 550060
[2026-05-31 14:42:58] -rw-r--r--. 2 boinc boinc 312779927 May 31 08:50 ATLAS.root_0
[2026-05-31 14:42:58] -rw-r--r--. 2 boinc boinc     15667 May 31 08:50 start_atlas.sh
[2026-05-31 14:42:58] -rw-r--r--. 2 boinc boinc    697412 May 31 08:50 input.tar.gz
[2026-05-31 14:42:58] -rw-------. 1 boinc boinc 247369818 May 31 14:40 HITS.pool.root.1
[2026-05-31 14:42:58] -rw-------. 1 boinc boinc   2385920 May 31 14:42 result.tar.gz
14:43:00 (32602): run_atlas exited; CPU time 77273.480558
14:43:00 (32602): called boinc_finish(0)

</stderr_txt>
]]>

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