Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
20:55:27 (30661): wrapper (7.7.26015): starting
20:55:27 (30661): wrapper: running run_atlas (--nthreads 8)
[2026-05-30 20:55:27] Arguments: --nthreads 8
[2026-05-30 20:55:27] Threads: 8
[2026-05-30 20:55:27] Checking for CVMFS
[2026-05-30 20:55:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-30 20:55:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-30 20:55:27] Running cvmfs_config stat atlas.cern.ch
[2026-05-30 20:55:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-30 20:55:27] 2.11.0.0 4122 26488 67312 159973 1 187 3945350 4096001 1329 130560 0 6962203 99.817 1823293 819 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-05-30 20:55:27] CVMFS is ok
[2026-05-30 20:55:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-30 20:55:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-30 20:55:27] Further information can be found at the LHC@home message board.
[2026-05-30 20:55:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-30 20:55:27] Checking for apptainer binary...
[2026-05-30 20:55:27] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-05-30 20:55:27] apptainer is not installed, using version from CVMFS
[2026-05-30 20:55:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-30 20:55:27] WARNING: Environment variable TMPDIR already has value [/tmp/job_11682326/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node267
[2026-05-30 20:55:27] apptainer works
[2026-05-30 20:55:27] Set ATHENA_PROC_NUMBER=8
[2026-05-30 20:55:27] Set ATHENA_CORE_NUMBER=8
[2026-05-30 20:55:27] Starting ATLAS job with PandaID=7158596874
[2026-05-30 20:55:27] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11682326/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-30 21:54:47]  *** The last 200 lines of the pilot log: ***
[2026-05-30 21:54:47]  filetype=log
[2026-05-30 21:54:47]  guid=a27f809b-02bb-472f-9162-7fcf59357e2c
[2026-05-30 21:54:47]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-05-30 21:54:47]  is_altstaged=None
[2026-05-30 21:54:47]  is_tar=False
[2026-05-30 21:54:47]  lfn=log.50533997._003245.job.log.tgz.1
[2026-05-30 21:54:47]  mtime=0
[2026-05-30 21:54:47]  protocol_id=None
[2026-05-30 21:54:47]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-05-30 21:54:47]  replicas=None
[2026-05-30 21:54:47]  scope=mc23_13p6TeV
[2026-05-30 21:54:47]  status=None
[2026-05-30 21:54:47]  status_code=0
[2026-05-30 21:54:47]  storage_token=
[2026-05-30 21:54:47]  surl=/tmp/job_11682326/atlas/pilot/slots/0/PanDA_Pilot-7158596874/log.50533997._003245.job.log.tgz.1
[2026-05-30 21:54:47]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f7/11/log.50533997._003245.job.log.tgz.1
[2026-05-30 21:54:47]  workdir=None
[2026-05-30 21:54:47] ]
[2026-05-30 21:54:47] 2026-05-30 19:53:50,047 | INFO     | transferring file log.50533997._003245.job.log.tgz.1 from /tmp/job_11682326/atlas/pilot/slots/0/PanDA_Pilot-7158596874/log.50533997._003245.job.log.tgz.1 to /tmp/j
[2026-05-30 21:54:47] 2026-05-30 19:53:50,047 | INFO     | executing command: /usr/bin/env mv /tmp/job_11682326/atlas/pilot/slots/0/PanDA_Pilot-7158596874/log.50533997._003245.job.log.tgz.1 /tmp/job_11682326/atlas/pilot/sl
[2026-05-30 21:54:47] 2026-05-30 19:53:50,052 | INFO     | monitor loop #268: job 0:7158596874 is in state 'stageout'
[2026-05-30 21:54:47] 2026-05-30 19:53:50,052 | WARNING  | aborting job monitor tasks since payload process 9338 is not running
[2026-05-30 21:54:47] 2026-05-30 19:53:50,056 | INFO     | adding to output.list: log.50533997._003245.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f7/11/log.50533997._003245.job.log.tg
[2026-05-30 21:54:47] 2026-05-30 19:53:50,056 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-05-30 21:54:47] 2026-05-30 19:53:50,056 | INFO     | summary of transferred files:
[2026-05-30 21:54:47] 2026-05-30 19:53:50,056 | INFO     |  -- lfn=log.50533997._003245.job.log.tgz.1, status_code=0, status=transferred
[2026-05-30 21:54:47] 2026-05-30 19:53:50,056 | INFO     | stage-out finished correctly
[2026-05-30 21:54:47] 2026-05-30 19:53:52,555 | INFO     | monitor loop #269: job 0:7158596874 is in state 'finished'
[2026-05-30 21:54:47] 2026-05-30 19:53:52,555 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-30 21:54:47] 2026-05-30 19:53:53,553 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-30 21:54:47] 2026-05-30 19:53:55,063 | INFO     | monitor loop #270: job 0:7158596874 is in state 'finished'
[2026-05-30 21:54:47] 2026-05-30 19:53:55,063 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-30 21:54:47] 2026-05-30 19:53:55,907 | INFO     | job 7158596874 has state=finished
[2026-05-30 21:54:47] 2026-05-30 19:53:55,907 | INFO     | preparing for final server update for job 7158596874 in state='finished'
[2026-05-30 21:54:47] 2026-05-30 19:53:55,907 | INFO     | reading metadata from: /tmp/job_11682326/atlas/pilot/slots/0/PanDA_Pilot-7158596874/jobReport.json
[2026-05-30 21:54:47] 2026-05-30 19:53:55,909 | INFO     | added worker_node to metadata from /tmp/job_11682326/atlas/pilot/slots/0/workernode_map.json
[2026-05-30 21:54:47] 2026-05-30 19:53:55,909 | INFO     | this job has now completed (state=finished)
[2026-05-30 21:54:47] 2026-05-30 19:53:55,909 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-30 21:54:47] 2026-05-30 19:53:55,909 | INFO     | log transfer has been attempted: DONE
[2026-05-30 21:54:47] 2026-05-30 19:53:55,909 | INFO     | job 7158596874 has finished - writing final server update
[2026-05-30 21:54:47] 2026-05-30 19:53:55,909 | INFO     | total number of processed events: 400 (read)
[2026-05-30 21:54:47] 2026-05-30 19:53:55,928 | INFO     | using path: /tmp/job_11682326/atlas/pilot/slots/0/PanDA_Pilot-7158596874/memory_monitor_summary.json (trf name=prmon)
[2026-05-30 21:54:47] 2026-05-30 19:53:55,928 | INFO     | extracted standard info from prmon json
[2026-05-30 21:54:47] 2026-05-30 19:53:55,928 | INFO     | extracted standard memory fields from prmon json
[2026-05-30 21:54:47] 2026-05-30 19:53:55,928 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-30 21:54:47] 2026-05-30 19:53:55,928 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-30 21:54:47] 2026-05-30 19:53:55,929 | INFO     | fitting pss+swap vs Time
[2026-05-30 21:54:47] 2026-05-30 19:53:55,929 | INFO     | sum of square deviations: 38744912.5
[2026-05-30 21:54:47] 2026-05-30 19:53:55,929 | INFO     | sum of deviations: -983067276.9999999
[2026-05-30 21:54:47] 2026-05-30 19:53:55,929 | INFO     | mean x (centered): 0.0
[2026-05-30 21:54:47] 2026-05-30 19:53:55,929 | INFO     | mean y: 2591107.48
[2026-05-30 21:54:47] 2026-05-30 19:53:55,930 | INFO     | intersect: 2591107.48
[2026-05-30 21:54:47] 2026-05-30 19:53:55,930 | INFO     | chi2: 0.005933398013390481
[2026-05-30 21:54:47] 2026-05-30 19:53:55,930 | INFO     | current memory leak: -25.37 B/s (using 50 data points, chi2=0.01)
[2026-05-30 21:54:47] 2026-05-30 19:53:55,930 | INFO     | could have reported an average CPU frequency of 2379 MHz (5 samples)
[2026-05-30 21:54:47] 2026-05-30 19:53:55,930 | INFO     | ..............................
[2026-05-30 21:54:47] 2026-05-30 19:53:55,930 | INFO     | . Timing measurements:
[2026-05-30 21:54:47] 2026-05-30 19:53:55,930 | INFO     | . get job = 0 s
[2026-05-30 21:54:47] 2026-05-30 19:53:55,930 | INFO     | . initial setup = 3 s
[2026-05-30 21:54:47] 2026-05-30 19:53:55,930 | INFO     | . payload setup = 3 s
[2026-05-30 21:54:47] 2026-05-30 19:53:55,930 | INFO     | . stage-in = 0 s
[2026-05-30 21:54:47] 2026-05-30 19:53:55,930 | INFO     | . payload execution = 3475 s
[2026-05-30 21:54:47] 2026-05-30 19:53:55,930 | INFO     | . stage-out = 0 s
[2026-05-30 21:54:47] 2026-05-30 19:53:55,930 | INFO     | . log creation = 0 s
[2026-05-30 21:54:47] 2026-05-30 19:53:55,930 | INFO     | ..............................
[2026-05-30 21:54:47] 2026-05-30 19:53:55,979 | INFO     | 
[2026-05-30 21:54:47] 2026-05-30 19:53:55,979 | INFO     | job summary report
[2026-05-30 21:54:47] 2026-05-30 19:53:55,979 | INFO     | --------------------------------------------------
[2026-05-30 21:54:47] 2026-05-30 19:53:55,979 | INFO     | PanDA job id: 7158596874
[2026-05-30 21:54:47] 2026-05-30 19:53:55,979 | INFO     | task id: 50533997
[2026-05-30 21:54:47] 2026-05-30 19:53:55,980 | INFO     | errors: (none)
[2026-05-30 21:54:47] 2026-05-30 19:53:55,980 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-30 21:54:47] 2026-05-30 19:53:55,980 | INFO     | pilot state: finished 
[2026-05-30 21:54:47] 2026-05-30 19:53:55,980 | INFO     | transexitcode: 0
[2026-05-30 21:54:47] 2026-05-30 19:53:55,980 | INFO     | exeerrorcode: 0
[2026-05-30 21:54:47] 2026-05-30 19:53:55,980 | INFO     | exeerrordiag: 
[2026-05-30 21:54:47] 2026-05-30 19:53:55,980 | INFO     | exitcode: 0
[2026-05-30 21:54:47] 2026-05-30 19:53:55,980 | INFO     | exitmsg: OK
[2026-05-30 21:54:47] 2026-05-30 19:53:55,980 | INFO     | cpuconsumptiontime: 23963 s
[2026-05-30 21:54:47] 2026-05-30 19:53:55,980 | INFO     | nevents: 400
[2026-05-30 21:54:47] 2026-05-30 19:53:55,980 | INFO     | neventsw: 0
[2026-05-30 21:54:47] 2026-05-30 19:53:55,980 | INFO     | pid: 9338
[2026-05-30 21:54:47] 2026-05-30 19:53:55,980 | INFO     | pgrp: 9338
[2026-05-30 21:54:47] 2026-05-30 19:53:55,980 | INFO     | corecount: 8
[2026-05-30 21:54:47] 2026-05-30 19:53:55,980 | INFO     | event service: False
[2026-05-30 21:54:47] 2026-05-30 19:53:55,980 | INFO     | sizes: {0: 2267684, 10: 2267684, 3482: 2293486, 3484: 2302514, 3487: 2302570, 3489: 2302796}
[2026-05-30 21:54:47] 2026-05-30 19:53:55,980 | INFO     | --------------------------------------------------
[2026-05-30 21:54:47] 2026-05-30 19:53:55,980 | INFO     | 
[2026-05-30 21:54:47] 2026-05-30 19:53:55,980 | INFO     | executing command: ls -lF /tmp/job_11682326/atlas/pilot/slots/0
[2026-05-30 21:54:47] 2026-05-30 19:53:55,992 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-30 21:54:47] 2026-05-30 19:53:55,992 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-30 21:54:47] 2026-05-30 19:53:55,992 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-30 21:54:47] 2026-05-30 19:53:55,992 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-30 21:54:47] 2026-05-30 19:53:55,992 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-30 21:54:47] 2026-05-30 19:53:55,992 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-30 21:54:47] 2026-05-30 19:53:55,992 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-30 21:54:47] 2026-05-30 19:53:55,992 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-30 21:54:47] 2026-05-30 19:53:55,992 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-30 21:54:47] 2026-05-30 19:53:55,992 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-30 21:54:47] 2026-05-30 19:53:55,992 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-30 21:54:47] 2026-05-30 19:53:55,992 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-30 21:54:47] 2026-05-30 19:53:55,992 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-30 21:54:47] 2026-05-30 19:53:55,993 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-30 21:54:47] 2026-05-30 19:53:55,993 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-30 21:54:47] 2026-05-30 19:53:55,993 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-30 21:54:47] 2026-05-30 19:53:55,993 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-30 21:54:47] 2026-05-30 19:53:55,993 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-30 21:54:47] 2026-05-30 19:53:55,993 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-30 21:54:47] 2026-05-30 19:53:55,993 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-30 21:54:47] 2026-05-30 19:53:55,993 | INFO     | job 7158596874 has completed (purged errors)
[2026-05-30 21:54:47] 2026-05-30 19:53:55,993 | INFO     | overall cleanup function is called
[2026-05-30 21:54:47] 2026-05-30 19:53:56,999 | INFO     | --- collectZombieJob: --- 10, [9338]
[2026-05-30 21:54:47] 2026-05-30 19:53:56,999 | INFO     | zombie collector waiting for pid 9338
[2026-05-30 21:54:47] 2026-05-30 19:53:56,999 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-30 21:54:47] 2026-05-30 19:53:56,999 | INFO     | collected zombie processes
[2026-05-30 21:54:47] 2026-05-30 19:53:56,999 | INFO     | will attempt to kill all subprocesses of pid=9338
[2026-05-30 21:54:47] 2026-05-30 19:53:57,087 | INFO     | process IDs to be killed: [9338] (in reverse order)
[2026-05-30 21:54:47] 2026-05-30 19:53:57,127 | WARNING  | found no corresponding commands to process id(s)
[2026-05-30 21:54:47] 2026-05-30 19:53:57,127 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-30 21:54:47] 2026-05-30 19:53:57,133 | INFO     | did not find any defunct processes belonging to 9338
[2026-05-30 21:54:47] 2026-05-30 19:53:57,136 | INFO     | did not find any defunct processes belonging to 9338
[2026-05-30 21:54:47] 2026-05-30 19:53:57,136 | INFO     | Ready for new job
[2026-05-30 21:54:47] 2026-05-30 19:53:57,137 | INFO     | ***************************************
[2026-05-30 21:54:47] 2026-05-30 19:53:57,137 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-30 21:54:47] 2026-05-30 19:53:57,137 | INFO     | ***************************************
[2026-05-30 21:54:47] 2026-05-30 19:53:57,137 | INFO     | 
[2026-05-30 21:54:47] 2026-05-30 19:53:57,151 | INFO     | architecture information:
[2026-05-30 21:54:47] 2026-05-30 19:53:57,152 | INFO     | executing command: cat /etc/os-release
[2026-05-30 21:54:47] 2026-05-30 19:53:57,158 | INFO     | cat /etc/os-release:
[2026-05-30 21:54:47] NAME="CentOS Linux"
[2026-05-30 21:54:47] VERSION="7 (Core)"
[2026-05-30 21:54:47] ID="centos"
[2026-05-30 21:54:47] ID_LIKE="rhel fedora"
[2026-05-30 21:54:47] VERSION_ID="7"
[2026-05-30 21:54:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-30 21:54:47] ANSI_COLOR="0;31"
[2026-05-30 21:54:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-30 21:54:47] HOME_URL="https://www.centos.org/"
[2026-05-30 21:54:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-30 21:54:47] 
[2026-05-30 21:54:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-30 21:54:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-30 21:54:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-30 21:54:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-30 21:54:47] 
[2026-05-30 21:54:47] 2026-05-30 19:53:57,159 | INFO     | ***************************************
[2026-05-30 21:54:47] 2026-05-30 19:53:57,661 | INFO     | executing command: df -mP /tmp/job_11682326/atlas/pilot/slots/0
[2026-05-30 21:54:47] 2026-05-30 19:53:57,668 | INFO     | sufficient remaining disk space (222912577536 B)
[2026-05-30 21:54:47] 2026-05-30 19:53:57,668 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-30 21:54:47] 2026-05-30 19:53:57,669 | INFO     | current server update state: UPDATING_FINAL
[2026-05-30 21:54:47] 2026-05-30 19:53:57,669 | INFO     | update_server=False
[2026-05-30 21:54:47] 2026-05-30 19:53:57,669 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-30 21:54:47] 2026-05-30 19:53:57,669 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-30 21:54:47] 2026-05-30 19:53:57,821 | INFO     | all data control threads have been joined
[2026-05-30 21:54:47] 2026-05-30 19:53:57,942 | INFO     | all job control threads have been joined
[2026-05-30 21:54:47] 2026-05-30 19:53:58,119 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-30 21:54:47] 2026-05-30 19:53:58,571 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-30 21:54:47] 2026-05-30 19:53:58,571 | INFO     | aborting loop
[2026-05-30 21:54:47] 2026-05-30 19:53:58,671 | INFO     | [job] queue monitor thread has finished
[2026-05-30 21:54:47] 2026-05-30 19:53:58,674 | INFO     | [job] retrieve thread has finished
[2026-05-30 21:54:47] 2026-05-30 19:53:58,723 | INFO     | all payload control threads have been joined
[2026-05-30 21:54:47] 2026-05-30 19:53:58,827 | INFO     | [data] control thread has finished
[2026-05-30 21:54:47] 2026-05-30 19:53:58,947 | INFO     | [job] control thread has finished
[2026-05-30 21:54:47] 2026-05-30 19:53:58,982 | INFO     | [payload] execute_payloads thread has finished
[2026-05-30 21:54:47] 2026-05-30 19:53:59,419 | INFO     | [job] validate thread has finished
[2026-05-30 21:54:47] 2026-05-30 19:53:59,471 | INFO     | [job] create_data_payload thread has finished
[2026-05-30 21:54:47] 2026-05-30 19:53:59,529 | INFO     | [payload] validate_pre thread has finished
[2026-05-30 21:54:47] 2026-05-30 19:53:59,576 | INFO     | [job] job monitor thread has finished
[2026-05-30 21:54:47] 2026-05-30 19:53:59,612 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-30 21:54:47] 2026-05-30 19:53:59,648 | INFO     | [payload] validate_post thread has finished
[2026-05-30 21:54:47] 2026-05-30 19:53:59,728 | INFO     | [payload] control thread has finished
[2026-05-30 21:54:47] 2026-05-30 19:53:59,823 | INFO     | [payload] failed_post thread has finished
[2026-05-30 21:54:47] 2026-05-30 19:54:00,124 | INFO     | [data] copytool_out thread has finished
[2026-05-30 21:54:47] 2026-05-30 19:54:00,137 | INFO     | [data] copytool_in thread has finished
[2026-05-30 21:54:47] 2026-05-30 19:54:03,617 | INFO     | [data] queue_monitor thread has finished
[2026-05-30 21:54:47] 2026-05-30 19:54:07,847 | INFO     | job.realtimelogging is not enabled
[2026-05-30 21:54:47] 2026-05-30 19:54:08,852 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-30 21:54:47] 2026-05-30 19:54:28,727 | INFO     | PID=3276 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-05-30 21:54:47] 2026-05-30 19:54:28,727 | INFO     | .. there are 4 such processes running
[2026-05-30 21:54:47] 2026-05-30 19:54:28,728 | INFO     | found 0 job(s) in 20 queues
[2026-05-30 21:54:47] 2026-05-30 19:54:28,728 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-30 21:54:47] 2026-05-30 19:54:28,728 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-30 21:54:47] 2026-05-30 19:54:40,348 | INFO     | [monitor] cgroup control has ended
[2026-05-30 21:54:47] 2026-05-30 19:54:41,926 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456067565312)>']
[2026-05-30 21:54:47] 2026-05-30 19:54:42,798 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-30 21:54:47] 2026-05-30 19:54:42,798 | INFO     | [monitor] control thread has ended
[2026-05-30 21:54:47] 2026-05-30 19:54:46,952 | INFO     | all workflow threads have been joined
[2026-05-30 21:54:47] 2026-05-30 19:54:46,952 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-30 21:54:47] 2026-05-30 19:54:46,952 | INFO     | traces error code: 0
[2026-05-30 21:54:47] 2026-05-30 19:54:46,952 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-30 21:54:47] 2026-05-30 19:54:47,027 [wrapper] ==== pilot stdout END ====
[2026-05-30 21:54:47] 2026-05-30 19:54:47,028 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-30 21:54:47] 2026-05-30 19:54:47,029 [wrapper] pilotpid: 3276
[2026-05-30 21:54:47] 2026-05-30 19:54:47,031 [wrapper] Pilot exit status: 0
[2026-05-30 21:54:47] 2026-05-30 19:54:47,034 [wrapper] pandaids: 7158596874
[2026-05-30 21:54:47] 2026-05-30 19:54:47,058 [wrapper] cleanup supervisor_pilot 24617 3277
[2026-05-30 21:54:47] 2026-05-30 19:54:47,059 [wrapper] Test setup, not cleaning
[2026-05-30 21:54:47] 2026-05-30 19:54:47,061 [wrapper] apfmon messages muted
[2026-05-30 21:54:47] 2026-05-30 19:54:47,062 [wrapper] ==== wrapper stdout END ====
[2026-05-30 21:54:47] 2026-05-30 19:54:47,063 [wrapper] ==== wrapper stderr END ====
[2026-05-30 21:54:47]  *** Error codes and diagnostics ***
[2026-05-30 21:54:47]     "exeErrorCode": 0,
[2026-05-30 21:54:47]     "pilotErrorCode": 0,
[2026-05-30 21:54:47]  *** Listing of results directory ***
[2026-05-30 21:54:47] total 544252
[2026-05-30 21:54:47] -rw------- 1 mf493845 unix-user    683926 May 30 11:52 pilot3.tar.gz
[2026-05-30 21:54:47] -rwx------ 1 mf493845 unix-user     36281 May 30 11:54 runpilot2-wrapper.sh
[2026-05-30 21:54:47] -rw------- 1 mf493845 unix-user      5631 May 30 11:55 queuedata.json
[2026-05-30 21:54:47] -rw------- 1 mf493845 unix-user       100 May 30 19:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-30 21:54:47] -rwxr-xr-x 1 mf493845 unix-user      7986 May 30 19:36 run_atlas
[2026-05-30 21:54:47] -rw------- 1 mf493845 unix-user       105 May 30 19:36 job.xml
[2026-05-30 21:54:47] -rw-r--r-- 2 mf493845 unix-user 310649991 May 30 20:55 EVNT.50532964._000170.pool.root.1
[2026-05-30 21:54:47] -rw-r--r-- 2 mf493845 unix-user     15667 May 30 20:55 start_atlas.sh
[2026-05-30 21:54:47] drwxrwx--x 2 mf493845 unix-user       100 May 30 20:55 shared
[2026-05-30 21:54:47] -rw-r--r-- 2 mf493845 unix-user    697417 May 30 20:55 input.tar.gz
[2026-05-30 21:54:47] -rw------- 1 mf493845 unix-user      6307 May 30 20:55 init_data.xml
[2026-05-30 21:54:47] -rw------- 1 mf493845 unix-user         0 May 30 20:55 boinc_setup_complete
[2026-05-30 21:54:47] -rw------- 1 mf493845 unix-user      8192 May 30 20:55 boinc_mmap_file
[2026-05-30 21:54:47] -rw------- 1 mf493845 unix-user         0 May 30 20:55 boinc_lockfile
[2026-05-30 21:54:47] -rw------- 1 mf493845 unix-user      2513 May 30 20:55 pandaJob.out
[2026-05-30 21:54:47] -rw------- 1 mf493845 unix-user    995580 May 30 20:55 agis_schedconf.cvmfs.json
[2026-05-30 21:54:47] -rw------- 1 mf493845 unix-user   1502789 May 30 20:55 agis_ddmendpoints.agis.ALL.json
[2026-05-30 21:54:47] -rw------- 1 mf493845 unix-user       420 May 30 20:55 workernode_map.json
[2026-05-30 21:54:47] drwx------ 5 mf493845 unix-user       520 May 30 20:55 pilot3
[2026-05-30 21:54:47] -rw------- 1 mf493845 unix-user 241209560 May 30 21:53 HITS.50533997._003245.pool.root.1
[2026-05-30 21:54:47] -rw------- 1 mf493845 unix-user      1014 May 30 21:53 memory_monitor_summary.json
[2026-05-30 21:54:47] -rw------- 1 mf493845 unix-user    300205 May 30 21:53 log.50533997._003245.job.log.tgz.1
[2026-05-30 21:54:47] -rw------- 1 mf493845 unix-user      6332 May 30 21:53 heartbeat_new.json
[2026-05-30 21:54:47] -rw------- 1 mf493845 unix-user      6222 May 30 21:53 heartbeat.json
[2026-05-30 21:54:47] -rw------- 1 mf493845 unix-user        95 May 30 21:54 pilot_heartbeat.json
[2026-05-30 21:54:47] -rw------- 1 mf493845 unix-user      4905 May 30 21:54 pilotlog.txt
[2026-05-30 21:54:47] -rw------- 1 mf493845 unix-user    376069 May 30 21:54 log.50533997._003245.job.log.1
[2026-05-30 21:54:47] -rw------- 1 mf493845 unix-user       357 May 30 21:54 output.list
[2026-05-30 21:54:47] -rw------- 1 mf493845 unix-user       410 May 30 21:54 runtime_log
[2026-05-30 21:54:47] -rw------- 1 mf493845 unix-user    696320 May 30 21:54 result.tar.gz
[2026-05-30 21:54:47] -rw------- 1 mf493845 unix-user      8842 May 30 21:54 runtime_log.err
[2026-05-30 21:54:47] -rw------- 1 mf493845 unix-user       642 May 30 21:54 b3c209181892.diag
[2026-05-30 21:54:47] -rw------- 1 mf493845 unix-user     21703 May 30 21:54 stderr.txt
[2026-05-30 21:54:47] HITS file was successfully produced:
[2026-05-30 21:54:47] -rw------- 1 mf493845 unix-user 241209560 May 30 21:53 shared/HITS.pool.root.1
[2026-05-30 21:54:47]  *** Contents of shared directory: ***
[2026-05-30 21:54:47] total 540312
[2026-05-30 21:54:47] -rw-r--r-- 2 mf493845 unix-user 310649991 May 30 20:55 ATLAS.root_0
[2026-05-30 21:54:47] -rw-r--r-- 2 mf493845 unix-user     15667 May 30 20:55 start_atlas.sh
[2026-05-30 21:54:47] -rw-r--r-- 2 mf493845 unix-user    697417 May 30 20:55 input.tar.gz
[2026-05-30 21:54:47] -rw------- 1 mf493845 unix-user 241209560 May 30 21:53 HITS.pool.root.1
[2026-05-30 21:54:47] -rw------- 1 mf493845 unix-user    696320 May 30 21:54 result.tar.gz
21:54:48 (30661): run_atlas exited; CPU time 24005.072760
21:54:48 (30661): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN