Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:10:23 (1278530): wrapper (7.7.26015): starting
21:10:23 (1278530): wrapper: running run_atlas (--nthreads 4)
[2026-05-30 21:10:23] Arguments: --nthreads 4
[2026-05-30 21:10:23] Threads: 4
[2026-05-30 21:10:23] Checking for CVMFS
[2026-05-30 21:10:23] No cvmfs_config command found, will try listing directly
[2026-05-30 21:10:23] CVMFS is ok
[2026-05-30 21:10:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-30 21:10:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-30 21:10:23] Further information can be found at the LHC@home message board.
[2026-05-30 21:10:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-30 21:10:23] Checking for apptainer binary...
[2026-05-30 21:10:23] which: no apptainer in ((null))
[2026-05-30 21:10:23] apptainer is not installed, using version from CVMFS
[2026-05-30 21:10:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-30 21:10:23] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot100/slots/3/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2026-05-30 21:10:23] apptainer works
[2026-05-30 21:10:23] Set ATHENA_PROC_NUMBER=4
[2026-05-30 21:10:23] Set ATHENA_CORE_NUMBER=4
[2026-05-30 21:10:23] Starting ATLAS job with PandaID=7159098580
[2026-05-30 21:10:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot100/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-31 00:09:38]  *** The last 200 lines of the pilot log: ***
[2026-05-31 00:09:38] 2026-05-30 22:06:31,439 | INFO     | total number of processed events: 400 (read)
[2026-05-31 00:09:38] 2026-05-30 22:06:31,470 | INFO     | using path: /var/lib/boinc/var/slot100/slots/3/PanDA_Pilot-7159098580/memory_monitor_summary.json (trf name=prmon)
[2026-05-31 00:09:38] 2026-05-30 22:06:31,470 | INFO     | extracted standard info from prmon json
[2026-05-31 00:09:38] 2026-05-30 22:06:31,471 | INFO     | extracted standard memory fields from prmon json
[2026-05-31 00:09:38] 2026-05-30 22:06:31,471 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-31 00:09:38] 2026-05-30 22:06:31,471 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-31 00:09:38] 2026-05-30 22:06:31,475 | INFO     | fitting pss+swap vs Time
[2026-05-31 00:09:38] 2026-05-30 22:06:31,475 | INFO     | sum of square deviations: 1605470102.0
[2026-05-31 00:09:38] 2026-05-30 22:06:31,476 | INFO     | sum of deviations: 12991170671.0
[2026-05-31 00:09:38] 2026-05-30 22:06:31,476 | INFO     | mean x (centered): 0.0
[2026-05-31 00:09:38] 2026-05-30 22:06:31,477 | INFO     | mean y: 2333343.9190751445
[2026-05-31 00:09:38] 2026-05-30 22:06:31,477 | INFO     | intersect: 2333343.9190751445
[2026-05-31 00:09:38] 2026-05-30 22:06:31,477 | INFO     | chi2: 2.1625445928517935
[2026-05-31 00:09:38] 2026-05-30 22:06:31,477 | INFO     | sum of square deviations: 1470248962.0
[2026-05-31 00:09:38] 2026-05-30 22:06:31,478 | INFO     | sum of deviations: 23489100786.000004
[2026-05-31 00:09:38] 2026-05-30 22:06:31,478 | INFO     | mean x (centered): 0.0
[2026-05-31 00:09:38] 2026-05-30 22:06:31,479 | INFO     | mean y: 2344892.226190476
[2026-05-31 00:09:38] 2026-05-30 22:06:31,479 | INFO     | intersect: 2344892.226190476
[2026-05-31 00:09:38] 2026-05-30 22:06:31,479 | INFO     | chi2: 1.357786364422495
[2026-05-31 00:09:38] 2026-05-30 22:06:31,479 | INFO     | current chi2=1.357786364422495 (change=37.213485959521726 %)
[2026-05-31 00:09:38] 2026-05-30 22:06:31,479 | INFO     | sum of square deviations: 1342841922.0
[2026-05-31 00:09:38] 2026-05-30 22:06:31,480 | INFO     | sum of deviations: 22769830144.0
[2026-05-31 00:09:38] 2026-05-30 22:06:31,484 | INFO     | mean x (centered): 0.0
[2026-05-31 00:09:38] 2026-05-30 22:06:31,484 | INFO     | mean y: 2344031.042944785
[2026-05-31 00:09:38] 2026-05-30 22:06:31,484 | INFO     | intersect: 2344031.042944785
[2026-05-31 00:09:38] 2026-05-30 22:06:31,484 | INFO     | chi2: 1.3586188248687336
[2026-05-31 00:09:38] 2026-05-30 22:06:31,485 | INFO     | current chi2=1.3586188248687336 (change=-0.061310119769298566 %)
[2026-05-31 00:09:38] 2026-05-30 22:06:31,485 | INFO     | right removable region: 162
[2026-05-31 00:09:38] 2026-05-30 22:06:31,485 | INFO     | sum of square deviations: 1470248962.0
[2026-05-31 00:09:38] 2026-05-30 22:06:31,486 | INFO     | sum of deviations: -9838997379.0
[2026-05-31 00:09:38] 2026-05-30 22:06:31,486 | INFO     | mean x (centered): 0.0
[2026-05-31 00:09:38] 2026-05-30 22:06:31,486 | INFO     | mean y: 2358729.1785714286
[2026-05-31 00:09:38] 2026-05-30 22:06:31,486 | INFO     | intersect: 2358729.1785714286
[2026-05-31 00:09:38] 2026-05-30 22:06:31,487 | INFO     | chi2: 0.8286123079353769
[2026-05-31 00:09:38] 2026-05-30 22:06:31,487 | INFO     | current chi2=0.8286123079353769 (change=61.68345796547629 %)
[2026-05-31 00:09:38] 2026-05-30 22:06:31,487 | INFO     | sum of square deviations: 1342841922.0
[2026-05-31 00:09:38] 2026-05-30 22:06:31,488 | INFO     | sum of deviations: -9347875582.0
[2026-05-31 00:09:38] 2026-05-30 22:06:31,488 | INFO     | mean x (centered): 0.0
[2026-05-31 00:09:38] 2026-05-30 22:06:31,488 | INFO     | mean y: 2358150.987730061
[2026-05-31 00:09:38] 2026-05-30 22:06:31,488 | INFO     | intersect: 2358150.987730061
[2026-05-31 00:09:38] 2026-05-30 22:06:31,489 | INFO     | chi2: 0.8285746268367288
[2026-05-31 00:09:38] 2026-05-30 22:06:31,489 | INFO     | current chi2=0.8285746268367288 (change=0.00454749444188078 %)
[2026-05-31 00:09:38] 2026-05-30 22:06:31,489 | INFO     | left removable region: 10
[2026-05-31 00:09:38] 2026-05-30 22:06:31,489 | INFO     | sum of square deviations: 1088905998.0
[2026-05-31 00:09:38] 2026-05-30 22:06:31,490 | INFO     | sum of deviations: 1124315217.0000002
[2026-05-31 00:09:38] 2026-05-30 22:06:31,490 | INFO     | mean x (centered): 0.0
[2026-05-31 00:09:38] 2026-05-30 22:06:31,490 | INFO     | mean y: 2371146.0921052634
[2026-05-31 00:09:38] 2026-05-30 22:06:31,490 | INFO     | intersect: 2371146.0921052634
[2026-05-31 00:09:38] 2026-05-30 22:06:31,491 | INFO     | chi2: 0.0002759835573328397
[2026-05-31 00:09:38] 2026-05-30 22:06:31,491 | INFO     | current memory leak: 1.03 B/s (using 152 data points, chi2=0.00)
[2026-05-31 00:09:38] 2026-05-30 22:06:31,491 | INFO     | could have reported an average CPU frequency of 2720 MHz (9 samples)
[2026-05-31 00:09:38] 2026-05-30 22:06:31,492 | INFO     | ..............................
[2026-05-31 00:09:38] 2026-05-30 22:06:31,492 | INFO     | . Timing measurements:
[2026-05-31 00:09:38] 2026-05-30 22:06:31,492 | INFO     | . get job = 0 s
[2026-05-31 00:09:38] 2026-05-30 22:06:31,492 | INFO     | . initial setup = 8 s
[2026-05-31 00:09:38] 2026-05-30 22:06:31,492 | INFO     | . payload setup = 15 s
[2026-05-31 00:09:38] 2026-05-30 22:06:31,492 | INFO     | . stage-in = 0 s
[2026-05-31 00:09:38] 2026-05-30 22:06:31,492 | INFO     | . payload execution = 10506 s
[2026-05-31 00:09:38] 2026-05-30 22:06:31,492 | INFO     | . stage-out = 0 s
[2026-05-31 00:09:38] 2026-05-30 22:06:31,492 | INFO     | . log creation = 0 s
[2026-05-31 00:09:38] 2026-05-30 22:06:31,492 | INFO     | ..............................
[2026-05-31 00:09:38] 2026-05-30 22:06:31,588 | INFO     | 
[2026-05-31 00:09:38] 2026-05-30 22:06:31,589 | INFO     | job summary report
[2026-05-31 00:09:38] 2026-05-30 22:06:31,589 | INFO     | --------------------------------------------------
[2026-05-31 00:09:38] 2026-05-30 22:06:31,589 | INFO     | PanDA job id: 7159098580
[2026-05-31 00:09:38] 2026-05-30 22:06:31,589 | INFO     | task id: 50533997
[2026-05-31 00:09:38] 2026-05-30 22:06:31,589 | INFO     | errors: (none)
[2026-05-31 00:09:38] 2026-05-30 22:06:31,589 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-31 00:09:38] 2026-05-30 22:06:31,590 | INFO     | pilot state: finished 
[2026-05-31 00:09:38] 2026-05-30 22:06:31,590 | INFO     | transexitcode: 0
[2026-05-31 00:09:38] 2026-05-30 22:06:31,590 | INFO     | exeerrorcode: 0
[2026-05-31 00:09:38] 2026-05-30 22:06:31,590 | INFO     | exeerrordiag: 
[2026-05-31 00:09:38] 2026-05-30 22:06:31,590 | INFO     | exitcode: 0
[2026-05-31 00:09:38] 2026-05-30 22:06:31,590 | INFO     | exitmsg: OK
[2026-05-31 00:09:38] 2026-05-30 22:06:31,590 | INFO     | cpuconsumptiontime: 40156 s
[2026-05-31 00:09:38] 2026-05-30 22:06:31,590 | INFO     | nevents: 400
[2026-05-31 00:09:38] 2026-05-30 22:06:31,590 | INFO     | neventsw: 0
[2026-05-31 00:09:38] 2026-05-30 22:06:31,590 | INFO     | pid: 1288875
[2026-05-31 00:09:38] 2026-05-30 22:06:31,590 | INFO     | pgrp: 1288875
[2026-05-31 00:09:38] 2026-05-30 22:06:31,591 | INFO     | corecount: 4
[2026-05-31 00:09:38] 2026-05-30 22:06:31,591 | INFO     | event service: False
[2026-05-31 00:09:38] 2026-05-30 22:06:31,591 | INFO     | sizes: {0: 2265714, 1: 2267599, 12: 2267599, 10525: 2296797, 10527: 2305819, 10530: 2305875, 10532: 2306261}
[2026-05-31 00:09:38] 2026-05-30 22:06:31,591 | INFO     | --------------------------------------------------
[2026-05-31 00:09:38] 2026-05-30 22:06:31,591 | INFO     | 
[2026-05-31 00:09:38] 2026-05-30 22:06:31,591 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot100/slots/3
[2026-05-31 00:09:38] 2026-05-30 22:06:31,624 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-31 00:09:38] 2026-05-30 22:06:31,626 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-31 00:09:38] 2026-05-30 22:06:31,627 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-31 00:09:38] 2026-05-30 22:06:31,627 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-31 00:09:38] 2026-05-30 22:06:31,627 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-31 00:09:38] 2026-05-30 22:06:31,627 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-31 00:09:38] 2026-05-30 22:06:31,627 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-31 00:09:38] 2026-05-30 22:06:31,627 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-31 00:09:38] 2026-05-30 22:06:31,627 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-31 00:09:38] 2026-05-30 22:06:31,627 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-31 00:09:38] 2026-05-30 22:06:31,627 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-31 00:09:38] 2026-05-30 22:06:31,628 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-31 00:09:38] 2026-05-30 22:06:31,628 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-31 00:09:38] 2026-05-30 22:06:31,628 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-31 00:09:38] 2026-05-30 22:06:31,628 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-31 00:09:38] 2026-05-30 22:06:31,628 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-31 00:09:38] 2026-05-30 22:06:31,628 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-31 00:09:38] 2026-05-30 22:06:31,628 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-31 00:09:38] 2026-05-30 22:06:31,628 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-31 00:09:38] 2026-05-30 22:06:31,628 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-31 00:09:38] 2026-05-30 22:06:31,629 | INFO     | job 7159098580 has completed (purged errors)
[2026-05-31 00:09:38] 2026-05-30 22:06:31,629 | INFO     | overall cleanup function is called
[2026-05-31 00:09:38] 2026-05-30 22:06:31,640 | WARNING  | process 1288875 can no longer be monitored (due to stat problems) - aborting
[2026-05-31 00:09:38] 2026-05-30 22:06:32,247 | INFO     | using path: /var/lib/boinc/var/slot100/slots/3/memory_monitor_summary.json (trf name=prmon)
[2026-05-31 00:09:38] 2026-05-30 22:06:32,637 | INFO     | --- collectZombieJob: --- 10, [1288875]
[2026-05-31 00:09:38] 2026-05-30 22:06:32,637 | INFO     | zombie collector waiting for pid 1288875
[2026-05-31 00:09:38] 2026-05-30 22:06:32,638 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-31 00:09:38] 2026-05-30 22:06:32,638 | INFO     | collected zombie processes
[2026-05-31 00:09:38] 2026-05-30 22:06:32,638 | INFO     | will attempt to kill all subprocesses of pid=1288875
[2026-05-31 00:09:38] 2026-05-30 22:06:33,596 | INFO     | number of running child processes to parent process 1288875: 1
[2026-05-31 00:09:38] 2026-05-30 22:06:33,597 | INFO     | maximum number of monitored processes: 6
[2026-05-31 00:09:38] 2026-05-30 22:06:33,597 | INFO     | aborting job monitoring since job object (job id=7159098580) has expired
[2026-05-31 00:09:38] 2026-05-30 22:06:33,921 | INFO     | process IDs to be killed: [1288875] (in reverse order)
[2026-05-31 00:09:38] 2026-05-30 22:06:34,235 | WARNING  | found no corresponding commands to process id(s)
[2026-05-31 00:09:38] 2026-05-30 22:06:34,235 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-31 00:09:38] 2026-05-30 22:06:34,267 | INFO     | did not find any defunct processes belonging to 1288875
[2026-05-31 00:09:38] 2026-05-30 22:06:34,296 | INFO     | did not find any defunct processes belonging to 1288875
[2026-05-31 00:09:38] 2026-05-30 22:06:34,296 | INFO     | Ready for new job
[2026-05-31 00:09:38] 2026-05-30 22:06:34,298 | INFO     | ***************************************
[2026-05-31 00:09:38] 2026-05-30 22:06:34,298 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-31 00:09:38] 2026-05-30 22:06:34,298 | INFO     | ***************************************
[2026-05-31 00:09:38] 2026-05-30 22:06:34,299 | INFO     | 
[2026-05-31 00:09:38] 2026-05-30 22:06:34,307 | INFO     | architecture information:
[2026-05-31 00:09:38] 2026-05-30 22:06:34,307 | INFO     | executing command: cat /etc/os-release
[2026-05-31 00:09:38] 2026-05-30 22:06:34,329 | INFO     | cat /etc/os-release:
[2026-05-31 00:09:38] NAME="CentOS Linux"
[2026-05-31 00:09:38] VERSION="7 (Core)"
[2026-05-31 00:09:38] ID="centos"
[2026-05-31 00:09:38] ID_LIKE="rhel fedora"
[2026-05-31 00:09:38] VERSION_ID="7"
[2026-05-31 00:09:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-31 00:09:38] ANSI_COLOR="0;31"
[2026-05-31 00:09:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-31 00:09:38] HOME_URL="https://www.centos.org/"
[2026-05-31 00:09:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-31 00:09:38] 
[2026-05-31 00:09:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-31 00:09:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-31 00:09:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-31 00:09:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-31 00:09:38] 
[2026-05-31 00:09:38] 2026-05-30 22:06:34,330 | INFO     | ***************************************
[2026-05-31 00:09:38] 2026-05-30 22:06:34,833 | INFO     | executing command: df -mP /var/lib/boinc/var/slot100/slots/3
[2026-05-31 00:09:38] 2026-05-30 22:06:34,854 | INFO     | sufficient remaining disk space (323266543616 B)
[2026-05-31 00:09:38] 2026-05-30 22:06:34,854 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-31 00:09:38] 2026-05-30 22:06:34,854 | INFO     | current server update state: UPDATING_FINAL
[2026-05-31 00:09:38] 2026-05-30 22:06:34,854 | INFO     | update_server=False
[2026-05-31 00:09:38] 2026-05-30 22:06:34,854 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-31 00:09:38] 2026-05-30 22:06:34,855 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-31 00:09:38] 2026-05-30 22:06:34,855 | INFO     | aborting loop
[2026-05-31 00:09:38] 2026-05-30 22:06:35,046 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-31 00:09:38] 2026-05-30 22:06:35,292 | INFO     | all data control threads have been joined
[2026-05-31 00:09:38] 2026-05-30 22:06:35,307 | INFO     | all job control threads have been joined
[2026-05-31 00:09:38] 2026-05-30 22:06:35,785 | INFO     | all payload control threads have been joined
[2026-05-31 00:09:38] 2026-05-30 22:06:35,856 | INFO     | [job] retrieve thread has finished
[2026-05-31 00:09:38] 2026-05-30 22:06:35,860 | INFO     | [job] job monitor thread has finished
[2026-05-31 00:09:38] 2026-05-30 22:06:35,869 | INFO     | [payload] validate_pre thread has finished
[2026-05-31 00:09:38] 2026-05-30 22:06:35,967 | INFO     | [payload] failed_post thread has finished
[2026-05-31 00:09:38] 2026-05-30 22:06:36,082 | INFO     | [data] copytool_in thread has finished
[2026-05-31 00:09:38] 2026-05-30 22:06:36,115 | INFO     | [payload] validate_post thread has finished
[2026-05-31 00:09:38] 2026-05-30 22:06:36,298 | INFO     | [data] control thread has finished
[2026-05-31 00:09:38] 2026-05-30 22:06:36,314 | INFO     | [job] control thread has finished
[2026-05-31 00:09:38] 2026-05-30 22:06:36,379 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-31 00:09:38] 2026-05-30 22:06:36,445 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-31 00:09:38] 2026-05-30 22:06:36,598 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-31 00:09:38] 2026-05-30 22:06:36,790 | INFO     | [payload] control thread has finished
[2026-05-31 00:09:38] 2026-05-30 22:06:36,865 | INFO     | [job] validate thread has finished
[2026-05-31 00:09:38] 2026-05-30 22:06:36,929 | INFO     | [payload] execute_payloads thread has finished
[2026-05-31 00:09:38] 2026-05-30 22:06:36,960 | INFO     | [job] create_data_payload thread has finished
[2026-05-31 00:09:38] 2026-05-30 22:06:37,051 | INFO     | [data] copytool_out thread has finished
[2026-05-31 00:09:38] 2026-05-30 22:06:37,602 | INFO     | [job] queue monitor thread has finished
[2026-05-31 00:09:38] 2026-05-30 22:06:40,451 | INFO     | [data] queue_monitor thread has finished
[2026-05-31 00:09:38] 2026-05-30 22:07:04,726 | INFO     | [monitor] cgroup control has ended
[2026-05-31 00:09:38] 2026-05-30 22:07:04,874 | INFO     | PID=1283040 has CPU usage=13.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-05-31 00:09:38] 2026-05-30 22:07:04,874 | INFO     | .. there are 17 such processes running
[2026-05-31 00:09:38] 2026-05-30 22:07:04,876 | INFO     | found 0 job(s) in 20 queues
[2026-05-31 00:09:38] 2026-05-30 22:07:04,876 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-31 00:09:38] 2026-05-30 22:07:04,876 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-31 00:09:38] 2026-05-30 22:07:06,780 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23118049281856)>', '<ExcThread(monitor, started 23117799081728)>']
[2026-05-31 00:09:38] 2026-05-30 22:07:06,891 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-31 00:09:38] 2026-05-30 22:07:06,892 | INFO     | [monitor] control thread has ended
[2026-05-31 00:09:38] 2026-05-30 22:07:11,805 | INFO     | all workflow threads have been joined
[2026-05-31 00:09:38] 2026-05-30 22:07:11,805 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-31 00:09:38] 2026-05-30 22:07:11,806 | INFO     | traces error code: 0
[2026-05-31 00:09:38] 2026-05-30 22:07:11,806 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-31 00:09:38] 2026-05-30 22:07:11,966 [wrapper] ==== pilot stdout END ====
[2026-05-31 00:09:38] 2026-05-30 22:07:11,970 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-31 00:09:38] 2026-05-30 22:07:11,974 [wrapper] pilotpid: 1283040
[2026-05-31 00:09:38] 2026-05-30 22:07:11,978 [wrapper] Pilot exit status: 0
[2026-05-31 00:09:38] 2026-05-30 22:07:11,995 [wrapper] pandaids: 7159098580
[2026-05-31 00:09:38] 2026-05-30 22:07:12,203 [wrapper] cleanup supervisor_pilot 1671878 1283041
[2026-05-31 00:09:38] 2026-05-30 22:07:12,207 [wrapper] Test setup, not cleaning
[2026-05-31 00:09:38] 2026-05-30 22:07:12,211 [wrapper] apfmon messages muted
[2026-05-31 00:09:38] 2026-05-30 22:07:12,215 [wrapper] ==== wrapper stdout END ====
[2026-05-31 00:09:38] 2026-05-30 22:07:12,222 [wrapper] ==== wrapper stderr END ====
[2026-05-31 00:09:38]  *** Error codes and diagnostics ***
[2026-05-31 00:09:38]     "exeErrorCode": 0,
[2026-05-31 00:09:38]     "pilotErrorCode": 0,
[2026-05-31 00:09:38]  *** Listing of results directory ***
[2026-05-31 00:09:38] total 543944
[2026-05-31 00:09:38] -rw-r--r--. 1 boinc boinc    683926 May 30 16:07 pilot3.tar.gz
[2026-05-31 00:09:38] -rw-r--r--. 1 boinc boinc      5631 May 30 16:07 queuedata.json
[2026-05-31 00:09:38] -rwx------. 1 boinc boinc     36281 May 30 16:08 runpilot2-wrapper.sh
[2026-05-31 00:09:38] -rw-r--r--. 1 boinc boinc       100 May 30 20:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-31 00:09:38] -rwxr-xr-x. 1 boinc boinc      7986 May 30 20:00 run_atlas
[2026-05-31 00:09:38] -rw-r--r--. 1 boinc boinc       105 May 30 20:00 job.xml
[2026-05-31 00:09:38] -rw-r--r--. 2 boinc boinc 310675220 May 30 21:10 EVNT.50532964._000178.pool.root.1
[2026-05-31 00:09:38] -rw-r--r--. 1 boinc boinc      6543 May 30 21:10 init_data.xml
[2026-05-31 00:09:38] -rw-r--r--. 2 boinc boinc     15667 May 30 21:10 start_atlas.sh
[2026-05-31 00:09:38] drwxrwx--x. 2 boinc boinc      4096 May 30 21:10 shared
[2026-05-31 00:09:38] -rw-r--r--. 2 boinc boinc    697414 May 30 21:10 input.tar.gz
[2026-05-31 00:09:38] -rw-r--r--. 1 boinc boinc         0 May 30 21:10 boinc_lockfile
[2026-05-31 00:09:38] -rw-r--r--. 1 boinc boinc      2514 May 30 21:10 pandaJob.out
[2026-05-31 00:09:38] -rw-------. 1 boinc boinc    995580 May 30 21:10 agis_schedconf.cvmfs.json
[2026-05-31 00:09:38] -rw-------. 1 boinc boinc   1502789 May 30 21:10 agis_ddmendpoints.agis.ALL.json
[2026-05-31 00:09:38] -rw-------. 1 boinc boinc       444 May 30 21:10 workernode_map.json
[2026-05-31 00:09:38] drwx------. 5 boinc boinc      4096 May 30 21:10 pilot3
[2026-05-31 00:09:38] -rw-------. 1 boinc boinc 239624241 May 31 00:05 HITS.50533997._003436.pool.root.1
[2026-05-31 00:09:38] -rw-r--r--. 1 boinc boinc       486 May 31 00:06 boinc_task_state.xml
[2026-05-31 00:09:38] -rw-------. 1 boinc boinc      1031 May 31 00:06 memory_monitor_summary.json
[2026-05-31 00:09:38] -rw-------. 1 boinc boinc    299580 May 31 00:06 log.50533997._003436.job.log.tgz.1
[2026-05-31 00:09:38] -rw-------. 1 boinc boinc      6374 May 31 00:06 heartbeat_new.json
[2026-05-31 00:09:38] -rw-------. 1 boinc boinc      6265 May 31 00:06 heartbeat.json
[2026-05-31 00:09:38] -rw-------. 1 boinc boinc        95 May 31 00:07 pilot_heartbeat.json
[2026-05-31 00:09:38] -rw-------. 1 boinc boinc      4835 May 31 00:07 pilotlog.txt
[2026-05-31 00:09:38] -rw-------. 1 boinc boinc    983603 May 31 00:07 log.50533997._003436.job.log.1
[2026-05-31 00:09:38] -rw-------. 1 boinc boinc       357 May 31 00:07 output.list
[2026-05-31 00:09:38] -rw-r--r--. 1 boinc boinc       410 May 31 00:07 runtime_log
[2026-05-31 00:09:38] -rw-------. 1 boinc boinc   1300480 May 31 00:07 result.tar.gz
[2026-05-31 00:09:38] -rw-r--r--. 1 boinc boinc      8845 May 31 00:07 runtime_log.err
[2026-05-31 00:09:38] -rw-------. 1 boinc boinc       664 May 31 00:07 ef4a45aae54e.diag
[2026-05-31 00:09:38] -rw-r--r--. 1 boinc boinc        26 May 31 00:09 wrapper_checkpoint.txt
[2026-05-31 00:09:38] -rw-r--r--. 1 boinc boinc      8192 May 31 00:09 boinc_mmap_file
[2026-05-31 00:09:38] -rw-r--r--. 1 boinc boinc     20844 May 31 00:09 stderr.txt
[2026-05-31 00:09:38] HITS file was successfully produced:
[2026-05-31 00:09:38] -rw-------. 1 boinc boinc 239624241 May 31 00:05 shared/HITS.pool.root.1
[2026-05-31 00:09:38]  *** Contents of shared directory: ***
[2026-05-31 00:09:38] total 539388
[2026-05-31 00:09:38] -rw-r--r--. 2 boinc boinc 310675220 May 30 21:10 ATLAS.root_0
[2026-05-31 00:09:38] -rw-r--r--. 2 boinc boinc     15667 May 30 21:10 start_atlas.sh
[2026-05-31 00:09:38] -rw-r--r--. 2 boinc boinc    697414 May 30 21:10 input.tar.gz
[2026-05-31 00:09:38] -rw-------. 1 boinc boinc 239624241 May 31 00:05 HITS.pool.root.1
[2026-05-31 00:09:38] -rw-------. 1 boinc boinc   1300480 May 31 00:07 result.tar.gz
00:09:39 (1278530): run_atlas exited; CPU time 40766.833616
00:09:39 (1278530): called boinc_finish(0)

</stderr_txt>
]]>

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