Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:15:31 (755031): wrapper (7.7.26015): starting
06:15:31 (755031): wrapper: running run_atlas (--nthreads 3)
[2026-05-31 06:15:32] Arguments: --nthreads 3
[2026-05-31 06:15:32] Threads: 3
[2026-05-31 06:15:32] Checking for CVMFS
[2026-05-31 06:15:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-31 06:15:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-31 06:15:33] Running cvmfs_config stat atlas.cern.ch
[2026-05-31 06:15:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-31 06:15:33] 2.9.2.0 4568 5047 82144 159985 1 50 32967933 36864000 0 130560 0 2917288 99.987 170046 7397 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-05-31 06:15:33] CVMFS is ok
[2026-05-31 06:15:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-31 06:15:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-31 06:15:33] Further information can be found at the LHC@home message board.
[2026-05-31 06:15:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-31 06:15:33] Checking for apptainer binary...
[2026-05-31 06:15:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-31 06:15:33] Running /usr/bin/apptainer --version
[2026-05-31 06:15:33] apptainer version 1.4.1-1.1
[2026-05-31 06:15:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-31 06:15:33] thA331a
[2026-05-31 06:15:33] apptainer works
[2026-05-31 06:15:33] Set ATHENA_PROC_NUMBER=3
[2026-05-31 06:15:33] Set ATHENA_CORE_NUMBER=3
[2026-05-31 06:15:33] Starting ATLAS job with PandaID=7158914769
[2026-05-31 06:15:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-31 08:01:57]  *** The last 200 lines of the pilot log: ***
[2026-05-31 08:01:57] 2026-05-31 06:01:18,436 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-7158914769/jobReport.json
[2026-05-31 08:01:57] 2026-05-31 06:01:18,438 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-05-31 08:01:57] 2026-05-31 06:01:18,438 | INFO     | this job has now completed (state=finished)
[2026-05-31 08:01:57] 2026-05-31 06:01:18,438 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-31 08:01:57] 2026-05-31 06:01:18,438 | INFO     | log transfer has been attempted: DONE
[2026-05-31 08:01:57] 2026-05-31 06:01:18,438 | INFO     | job 7158914769 has finished - writing final server update
[2026-05-31 08:01:57] 2026-05-31 06:01:18,438 | INFO     | total number of processed events: 400 (read)
[2026-05-31 08:01:57] 2026-05-31 06:01:18,440 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-7158914769/memory_monitor_summary.json (trf name=prmon)
[2026-05-31 08:01:57] 2026-05-31 06:01:18,440 | INFO     | extracted standard info from prmon json
[2026-05-31 08:01:57] 2026-05-31 06:01:18,440 | INFO     | extracted standard memory fields from prmon json
[2026-05-31 08:01:57] 2026-05-31 06:01:18,440 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-31 08:01:57] 2026-05-31 06:01:18,440 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-31 08:01:57] 2026-05-31 06:01:18,441 | INFO     | fitting pss+swap vs Time
[2026-05-31 08:01:57] 2026-05-31 06:01:18,442 | INFO     | sum of square deviations: 348769330.0
[2026-05-31 08:01:57] 2026-05-31 06:01:18,442 | INFO     | sum of deviations: 22247080396.000004
[2026-05-31 08:01:57] 2026-05-31 06:01:18,442 | INFO     | mean x (centered): 0.0
[2026-05-31 08:01:57] 2026-05-31 06:01:18,442 | INFO     | mean y: 2357890.576923077
[2026-05-31 08:01:57] 2026-05-31 06:01:18,442 | INFO     | intersect: 2357890.576923077
[2026-05-31 08:01:57] 2026-05-31 06:01:18,442 | INFO     | chi2: 3.2164607272546806
[2026-05-31 08:01:57] 2026-05-31 06:01:18,442 | INFO     | sum of square deviations: 300842850.0
[2026-05-31 08:01:57] 2026-05-31 06:01:18,442 | INFO     | sum of deviations: 21744442713.999996
[2026-05-31 08:01:57] 2026-05-31 06:01:18,442 | INFO     | mean x (centered): 0.0
[2026-05-31 08:01:57] 2026-05-31 06:01:18,442 | INFO     | mean y: 2356289.909090909
[2026-05-31 08:01:57] 2026-05-31 06:01:18,443 | INFO     | intersect: 2356289.909090909
[2026-05-31 08:01:57] 2026-05-31 06:01:18,443 | INFO     | chi2: 3.218074297052931
[2026-05-31 08:01:57] 2026-05-31 06:01:18,443 | INFO     | current chi2=3.218074297052931 (change=-0.05016600341417637 %)
[2026-05-31 08:01:57] 2026-05-31 06:01:18,443 | INFO     | right removable region: 98
[2026-05-31 08:01:57] 2026-05-31 06:01:18,443 | INFO     | sum of square deviations: 300842850.0
[2026-05-31 08:01:57] 2026-05-31 06:01:18,443 | INFO     | sum of deviations: -2030033823.0
[2026-05-31 08:01:57] 2026-05-31 06:01:18,443 | INFO     | mean x (centered): 0.0
[2026-05-31 08:01:57] 2026-05-31 06:01:18,443 | INFO     | mean y: 2434697.0808080807
[2026-05-31 08:01:57] 2026-05-31 06:01:18,443 | INFO     | intersect: 2434697.0808080807
[2026-05-31 08:01:57] 2026-05-31 06:01:18,443 | INFO     | chi2: 0.6377231932202803
[2026-05-31 08:01:57] 2026-05-31 06:01:18,443 | INFO     | current chi2=0.6377231932202803 (change=80.17313913344152 %)
[2026-05-31 08:01:57] 2026-05-31 06:01:18,443 | INFO     | sum of square deviations: 257521107.5
[2026-05-31 08:01:57] 2026-05-31 06:01:18,443 | INFO     | sum of deviations: -10001866098.000002
[2026-05-31 08:01:57] 2026-05-31 06:01:18,443 | INFO     | mean x (centered): 0.0
[2026-05-31 08:01:57] 2026-05-31 06:01:18,443 | INFO     | mean y: 2461939.8723404254
[2026-05-31 08:01:57] 2026-05-31 06:01:18,443 | INFO     | intersect: 2461939.8723404254
[2026-05-31 08:01:57] 2026-05-31 06:01:18,444 | INFO     | chi2: 0.036033407013413836
[2026-05-31 08:01:57] 2026-05-31 06:01:18,444 | INFO     | current chi2=0.036033407013413836 (change=94.3496790776171 %)
[2026-05-31 08:01:57] 2026-05-31 06:01:18,444 | INFO     | sum of square deviations: 218571540.0
[2026-05-31 08:01:57] 2026-05-31 06:01:18,444 | INFO     | sum of deviations: -9254240399.0
[2026-05-31 08:01:57] 2026-05-31 06:01:18,444 | INFO     | mean x (centered): 0.0
[2026-05-31 08:01:57] 2026-05-31 06:01:18,444 | INFO     | mean y: 2459003.258426966
[2026-05-31 08:01:57] 2026-05-31 06:01:18,444 | INFO     | intersect: 2459003.258426966
[2026-05-31 08:01:57] 2026-05-31 06:01:18,444 | INFO     | chi2: 0.03319703219603603
[2026-05-31 08:01:57] 2026-05-31 06:01:18,444 | INFO     | current chi2=0.03319703219603603 (change=7.871514387529148 %)
[2026-05-31 08:01:57] 2026-05-31 06:01:18,444 | INFO     | left removable region: 15
[2026-05-31 08:01:57] 2026-05-31 06:01:18,444 | INFO     | sum of square deviations: 177275882.0
[2026-05-31 08:01:57] 2026-05-31 06:01:18,444 | INFO     | sum of deviations: -8124204236.000002
[2026-05-31 08:01:57] 2026-05-31 06:01:18,444 | INFO     | mean x (centered): 0.0
[2026-05-31 08:01:57] 2026-05-31 06:01:18,444 | INFO     | mean y: 2464018.638554217
[2026-05-31 08:01:57] 2026-05-31 06:01:18,444 | INFO     | intersect: 2464018.638554217
[2026-05-31 08:01:57] 2026-05-31 06:01:18,444 | INFO     | chi2: 0.03114544403663256
[2026-05-31 08:01:57] 2026-05-31 06:01:18,444 | INFO     | current memory leak: -45.83 B/s (using 83 data points, chi2=0.03)
[2026-05-31 08:01:57] 2026-05-31 06:01:18,445 | INFO     | could have reported an average CPU frequency of 3558 MHz (7 samples)
[2026-05-31 08:01:57] 2026-05-31 06:01:18,445 | INFO     | ..............................
[2026-05-31 08:01:57] 2026-05-31 06:01:18,445 | INFO     | . Timing measurements:
[2026-05-31 08:01:57] 2026-05-31 06:01:18,445 | INFO     | . get job = 0 s
[2026-05-31 08:01:57] 2026-05-31 06:01:18,445 | INFO     | . initial setup = 3 s
[2026-05-31 08:01:57] 2026-05-31 06:01:18,445 | INFO     | . payload setup = 4 s
[2026-05-31 08:01:57] 2026-05-31 06:01:18,445 | INFO     | . stage-in = 0 s
[2026-05-31 08:01:57] 2026-05-31 06:01:18,445 | INFO     | . payload execution = 6312 s
[2026-05-31 08:01:57] 2026-05-31 06:01:18,445 | INFO     | . stage-out = 0 s
[2026-05-31 08:01:57] 2026-05-31 06:01:18,445 | INFO     | . log creation = 0 s
[2026-05-31 08:01:57] 2026-05-31 06:01:18,445 | INFO     | ..............................
[2026-05-31 08:01:57] 2026-05-31 06:01:18,473 | INFO     | 
[2026-05-31 08:01:57] 2026-05-31 06:01:18,474 | INFO     | job summary report
[2026-05-31 08:01:57] 2026-05-31 06:01:18,474 | INFO     | --------------------------------------------------
[2026-05-31 08:01:57] 2026-05-31 06:01:18,474 | INFO     | PanDA job id: 7158914769
[2026-05-31 08:01:57] 2026-05-31 06:01:18,474 | INFO     | task id: 50533940
[2026-05-31 08:01:57] 2026-05-31 06:01:18,474 | INFO     | errors: (none)
[2026-05-31 08:01:57] 2026-05-31 06:01:18,474 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-31 08:01:57] 2026-05-31 06:01:18,474 | INFO     | pilot state: finished 
[2026-05-31 08:01:57] 2026-05-31 06:01:18,474 | INFO     | transexitcode: 0
[2026-05-31 08:01:57] 2026-05-31 06:01:18,474 | INFO     | exeerrorcode: 0
[2026-05-31 08:01:57] 2026-05-31 06:01:18,474 | INFO     | exeerrordiag: 
[2026-05-31 08:01:57] 2026-05-31 06:01:18,474 | INFO     | exitcode: 0
[2026-05-31 08:01:57] 2026-05-31 06:01:18,474 | INFO     | exitmsg: OK
[2026-05-31 08:01:57] 2026-05-31 06:01:18,474 | INFO     | cpuconsumptiontime: 17539 s
[2026-05-31 08:01:57] 2026-05-31 06:01:18,474 | INFO     | nevents: 400
[2026-05-31 08:01:57] 2026-05-31 06:01:18,474 | INFO     | neventsw: 0
[2026-05-31 08:01:57] 2026-05-31 06:01:18,474 | INFO     | pid: 763500
[2026-05-31 08:01:57] 2026-05-31 06:01:18,474 | INFO     | pgrp: 763500
[2026-05-31 08:01:57] 2026-05-31 06:01:18,474 | INFO     | corecount: 3
[2026-05-31 08:01:57] 2026-05-31 06:01:18,474 | INFO     | event service: False
[2026-05-31 08:01:57] 2026-05-31 06:01:18,474 | INFO     | sizes: {0: 2265930, 1: 2267588, 11: 2267588, 6320: 2303769, 6322: 2303769, 6324: 2303963}
[2026-05-31 08:01:57] 2026-05-31 06:01:18,474 | INFO     | --------------------------------------------------
[2026-05-31 08:01:57] 2026-05-31 06:01:18,474 | INFO     | 
[2026-05-31 08:01:57] 2026-05-31 06:01:18,474 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-05-31 08:01:57] 2026-05-31 06:01:18,486 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-31 08:01:57] 2026-05-31 06:01:18,486 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-31 08:01:57] 2026-05-31 06:01:18,486 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-31 08:01:57] 2026-05-31 06:01:18,486 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-31 08:01:57] 2026-05-31 06:01:18,486 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-31 08:01:57] 2026-05-31 06:01:18,486 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-31 08:01:57] 2026-05-31 06:01:18,486 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-31 08:01:57] 2026-05-31 06:01:18,486 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-31 08:01:57] 2026-05-31 06:01:18,486 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-31 08:01:57] 2026-05-31 06:01:18,486 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-31 08:01:57] 2026-05-31 06:01:18,487 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-31 08:01:57] 2026-05-31 06:01:18,487 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-31 08:01:57] 2026-05-31 06:01:18,487 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-31 08:01:57] 2026-05-31 06:01:18,487 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-31 08:01:57] 2026-05-31 06:01:18,487 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-31 08:01:57] 2026-05-31 06:01:18,487 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-31 08:01:57] 2026-05-31 06:01:18,487 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-31 08:01:57] 2026-05-31 06:01:18,487 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-31 08:01:57] 2026-05-31 06:01:18,487 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-31 08:01:57] 2026-05-31 06:01:18,487 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-31 08:01:57] 2026-05-31 06:01:18,487 | INFO     | job 7158914769 has completed (purged errors)
[2026-05-31 08:01:57] 2026-05-31 06:01:18,487 | INFO     | overall cleanup function is called
[2026-05-31 08:01:57] 2026-05-31 06:01:19,493 | INFO     | --- collectZombieJob: --- 10, [763500]
[2026-05-31 08:01:57] 2026-05-31 06:01:19,494 | INFO     | zombie collector waiting for pid 763500
[2026-05-31 08:01:57] 2026-05-31 06:01:19,494 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-31 08:01:57] 2026-05-31 06:01:19,494 | INFO     | collected zombie processes
[2026-05-31 08:01:57] 2026-05-31 06:01:19,494 | INFO     | will attempt to kill all subprocesses of pid=763500
[2026-05-31 08:01:57] 2026-05-31 06:01:19,524 | INFO     | process IDs to be killed: [763500] (in reverse order)
[2026-05-31 08:01:57] 2026-05-31 06:01:19,548 | WARNING  | found no corresponding commands to process id(s)
[2026-05-31 08:01:57] 2026-05-31 06:01:19,548 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-31 08:01:57] 2026-05-31 06:01:19,549 | INFO     | did not find any defunct processes belonging to 763500
[2026-05-31 08:01:57] 2026-05-31 06:01:19,550 | INFO     | did not find any defunct processes belonging to 763500
[2026-05-31 08:01:57] 2026-05-31 06:01:19,550 | INFO     | Ready for new job
[2026-05-31 08:01:57] 2026-05-31 06:01:19,551 | INFO     | ***************************************
[2026-05-31 08:01:57] 2026-05-31 06:01:19,551 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-31 08:01:57] 2026-05-31 06:01:19,551 | INFO     | ***************************************
[2026-05-31 08:01:57] 2026-05-31 06:01:19,551 | INFO     | 
[2026-05-31 08:01:57] 2026-05-31 06:01:19,552 | INFO     | architecture information:
[2026-05-31 08:01:57] 2026-05-31 06:01:19,552 | INFO     | executing command: cat /etc/os-release
[2026-05-31 08:01:57] 2026-05-31 06:01:19,560 | INFO     | cat /etc/os-release:
[2026-05-31 08:01:57] NAME="CentOS Linux"
[2026-05-31 08:01:57] VERSION="7 (Core)"
[2026-05-31 08:01:57] ID="centos"
[2026-05-31 08:01:57] ID_LIKE="rhel fedora"
[2026-05-31 08:01:57] VERSION_ID="7"
[2026-05-31 08:01:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-31 08:01:57] ANSI_COLOR="0;31"
[2026-05-31 08:01:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-31 08:01:57] HOME_URL="https://www.centos.org/"
[2026-05-31 08:01:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-31 08:01:57] 
[2026-05-31 08:01:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-31 08:01:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-31 08:01:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-31 08:01:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-31 08:01:57] 
[2026-05-31 08:01:57] 2026-05-31 06:01:19,560 | INFO     | ***************************************
[2026-05-31 08:01:57] 2026-05-31 06:01:20,064 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-05-31 08:01:57] 2026-05-31 06:01:20,077 | INFO     | sufficient remaining disk space (325832409088 B)
[2026-05-31 08:01:57] 2026-05-31 06:01:20,077 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-31 08:01:57] 2026-05-31 06:01:20,078 | INFO     | current server update state: UPDATING_FINAL
[2026-05-31 08:01:57] 2026-05-31 06:01:20,078 | INFO     | update_server=False
[2026-05-31 08:01:57] 2026-05-31 06:01:20,078 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-31 08:01:57] 2026-05-31 06:01:20,078 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-05-31 08:01:57] 2026-05-31 06:01:20,078 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-31 08:01:57] 2026-05-31 06:01:20,078 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-31 08:01:57] 2026-05-31 06:01:20,078 | INFO     | found 0 job(s) in 20 queues
[2026-05-31 08:01:57] 2026-05-31 06:01:20,078 | INFO     | aborting loop
[2026-05-31 08:01:57] 2026-05-31 06:01:20,078 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-31 08:01:57] 2026-05-31 06:01:20,078 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-31 08:01:57] 2026-05-31 06:01:20,540 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-31 08:01:57] 2026-05-31 06:01:20,624 | INFO     | all data control threads have been joined
[2026-05-31 08:01:57] 2026-05-31 06:01:21,083 | INFO     | [job] retrieve thread has finished
[2026-05-31 08:01:57] 2026-05-31 06:01:21,083 | INFO     | [job] job monitor thread has finished
[2026-05-31 08:01:57] 2026-05-31 06:01:21,084 | INFO     | [job] queue monitor thread has finished
[2026-05-31 08:01:57] 2026-05-31 06:01:21,147 | INFO     | all job control threads have been joined
[2026-05-31 08:01:57] 2026-05-31 06:01:21,220 | INFO     | all payload control threads have been joined
[2026-05-31 08:01:57] 2026-05-31 06:01:21,249 | INFO     | [payload] execute_payloads thread has finished
[2026-05-31 08:01:57] 2026-05-31 06:01:21,504 | INFO     | [job] validate thread has finished
[2026-05-31 08:01:57] 2026-05-31 06:01:21,613 | INFO     | [payload] failed_post thread has finished
[2026-05-31 08:01:57] 2026-05-31 06:01:21,630 | INFO     | [data] control thread has finished
[2026-05-31 08:01:57] 2026-05-31 06:01:21,635 | INFO     | [job] create_data_payload thread has finished
[2026-05-31 08:01:57] 2026-05-31 06:01:21,670 | INFO     | [payload] validate_pre thread has finished
[2026-05-31 08:01:57] 2026-05-31 06:01:21,822 | INFO     | [data] copytool_in thread has finished
[2026-05-31 08:01:57] 2026-05-31 06:01:21,825 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-31 08:01:57] 2026-05-31 06:01:22,144 | INFO     | [payload] validate_post thread has finished
[2026-05-31 08:01:57] 2026-05-31 06:01:22,153 | INFO     | [job] control thread has finished
[2026-05-31 08:01:57] 2026-05-31 06:01:22,226 | INFO     | [payload] control thread has finished
[2026-05-31 08:01:57] 2026-05-31 06:01:22,547 | INFO     | [data] copytool_out thread has finished
[2026-05-31 08:01:57] 2026-05-31 06:01:23,102 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-31 08:01:57] 2026-05-31 06:01:27,109 | INFO     | [data] queue_monitor thread has finished
[2026-05-31 08:01:57] 2026-05-31 06:01:50,276 | INFO     | [monitor] cgroup control has ended
[2026-05-31 08:01:57] 2026-05-31 06:01:52,171 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140334339458880)>', '<ExcThread(monitor, started 140333987899136)>']
[2026-05-31 08:01:57] 2026-05-31 06:01:52,247 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-31 08:01:57] 2026-05-31 06:01:52,248 | INFO     | [monitor] control thread has ended
[2026-05-31 08:01:57] 2026-05-31 06:01:57,197 | INFO     | all workflow threads have been joined
[2026-05-31 08:01:57] 2026-05-31 06:01:57,197 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-31 08:01:57] 2026-05-31 06:01:57,198 | INFO     | traces error code: 0
[2026-05-31 08:01:57] 2026-05-31 06:01:57,198 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-31 08:01:57] 2026-05-31 06:01:57,250 [wrapper] ==== pilot stdout END ====
[2026-05-31 08:01:57] 2026-05-31 06:01:57,252 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-31 08:01:57] 2026-05-31 06:01:57,254 [wrapper] pilotpid: 759075
[2026-05-31 08:01:57] 2026-05-31 06:01:57,257 [wrapper] Pilot exit status: 0
[2026-05-31 08:01:57] 2026-05-31 06:01:57,264 [wrapper] pandaids: 7158914769
[2026-05-31 08:01:57] 2026-05-31 06:01:57,279 [wrapper] cleanup supervisor_pilot  769523 759076
[2026-05-31 08:01:57] 2026-05-31 06:01:57,281 [wrapper] Test setup, not cleaning
[2026-05-31 08:01:57] 2026-05-31 06:01:57,284 [wrapper] apfmon messages muted
[2026-05-31 08:01:57] 2026-05-31 06:01:57,286 [wrapper] ==== wrapper stdout END ====
[2026-05-31 08:01:57] 2026-05-31 06:01:57,288 [wrapper] ==== wrapper stderr END ====
[2026-05-31 08:01:57]  *** Error codes and diagnostics ***
[2026-05-31 08:01:57]     "exeErrorCode": 0,
[2026-05-31 08:01:57]     "pilotErrorCode": 0,
[2026-05-31 08:01:57]  *** Listing of results directory ***
[2026-05-31 08:01:57] total 550228
[2026-05-31 08:01:57] -rw-r--r-- 1 boinc boinc      5631 May 30 14:13 queuedata.json
[2026-05-31 08:01:57] -rw-r--r-- 1 boinc boinc    683926 May 30 14:13 pilot3.tar.gz
[2026-05-31 08:01:57] -rwx------ 1 boinc boinc     36281 May 30 14:14 runpilot2-wrapper.sh
[2026-05-31 08:01:57] -rw-r--r-- 1 boinc boinc       100 May 31 06:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-31 08:01:57] -rwxr-xr-x 1 boinc boinc      7986 May 31 06:15 run_atlas
[2026-05-31 08:01:57] -rw-r--r-- 1 boinc boinc       105 May 31 06:15 job.xml
[2026-05-31 08:01:57] -rw-r--r-- 2 boinc boinc 311775768 May 31 06:15 EVNT.50532940._000447.pool.root.1
[2026-05-31 08:01:57] -rw-r--r-- 2 boinc boinc    697410 May 31 06:15 input.tar.gz
[2026-05-31 08:01:57] -rw-r--r-- 2 boinc boinc     15667 May 31 06:15 start_atlas.sh
[2026-05-31 08:01:57] drwxrwx--x 2 boinc boinc      4096 May 31 06:15 shared
[2026-05-31 08:01:57] -rw-r--r-- 1 boinc boinc         0 May 31 06:15 boinc_setup_complete
[2026-05-31 08:01:57] -rw-r--r-- 1 boinc boinc      6355 May 31 06:15 init_data.xml
[2026-05-31 08:01:57] -rw-r--r-- 1 boinc boinc         0 May 31 06:15 boinc_lockfile
[2026-05-31 08:01:57] -rw-r--r-- 1 boinc boinc      2512 May 31 06:15 pandaJob.out
[2026-05-31 08:01:57] -rw------- 1 boinc boinc    995580 May 31 06:15 agis_schedconf.cvmfs.json
[2026-05-31 08:01:57] -rw------- 1 boinc boinc   1502789 May 31 06:15 agis_ddmendpoints.agis.ALL.json
[2026-05-31 08:01:57] -rw------- 1 boinc boinc       428 May 31 06:15 workernode_map.json
[2026-05-31 08:01:57] drwx------ 5 boinc boinc      4096 May 31 06:15 pilot3
[2026-05-31 08:01:57] -rw------- 1 boinc boinc 245824677 May 31 08:00 HITS.50533940._009865.pool.root.1
[2026-05-31 08:01:57] -rw-r--r-- 1 boinc boinc       487 May 31 08:00 boinc_task_state.xml
[2026-05-31 08:01:57] -rw------- 1 boinc boinc        95 May 31 08:01 pilot_heartbeat.json
[2026-05-31 08:01:57] -rw------- 1 boinc boinc      1019 May 31 08:01 memory_monitor_summary.json
[2026-05-31 08:01:57] -rw------- 1 boinc boinc    245272 May 31 08:01 log.50533940._009865.job.log.tgz.1
[2026-05-31 08:01:57] -rw------- 1 boinc boinc      6338 May 31 08:01 heartbeat_new.json
[2026-05-31 08:01:57] -rw------- 1 boinc boinc      6229 May 31 08:01 heartbeat.json
[2026-05-31 08:01:57] -rw-r--r-- 1 boinc boinc        27 May 31 08:01 wrapper_checkpoint.txt
[2026-05-31 08:01:57] -rw-r--r-- 1 boinc boinc      8192 May 31 08:01 boinc_mmap_file
[2026-05-31 08:01:57] -rw------- 1 boinc boinc      4555 May 31 08:01 pilotlog.txt
[2026-05-31 08:01:57] -rw------- 1 boinc boinc    608067 May 31 08:01 log.50533940._009865.job.log.1
[2026-05-31 08:01:57] -rw------- 1 boinc boinc       357 May 31 08:01 output.list
[2026-05-31 08:01:57] -rw-r--r-- 1 boinc boinc       410 May 31 08:01 runtime_log
[2026-05-31 08:01:57] -rw------- 1 boinc boinc    870400 May 31 08:01 result.tar.gz
[2026-05-31 08:01:57] -rw-r--r-- 1 boinc boinc      8524 May 31 08:01 runtime_log.err
[2026-05-31 08:01:57] -rw------- 1 boinc boinc       659 May 31 08:01 d497b280f0b4.diag
[2026-05-31 08:01:57] -rw-r--r-- 1 boinc boinc     20924 May 31 08:01 stderr.txt
[2026-05-31 08:01:57] HITS file was successfully produced:
[2026-05-31 08:01:57] -rw------- 1 boinc boinc 245824677 May 31 08:00 shared/HITS.pool.root.1
[2026-05-31 08:01:57]  *** Contents of shared directory: ***
[2026-05-31 08:01:57] total 546096
[2026-05-31 08:01:57] -rw-r--r-- 2 boinc boinc 311775768 May 31 06:15 ATLAS.root_0
[2026-05-31 08:01:57] -rw-r--r-- 2 boinc boinc    697410 May 31 06:15 input.tar.gz
[2026-05-31 08:01:57] -rw-r--r-- 2 boinc boinc     15667 May 31 06:15 start_atlas.sh
[2026-05-31 08:01:57] -rw------- 1 boinc boinc 245824677 May 31 08:00 HITS.pool.root.1
[2026-05-31 08:01:57] -rw------- 1 boinc boinc    870400 May 31 08:01 result.tar.gz
08:01:58 (755031): run_atlas exited; CPU time 17562.886018
08:01:58 (755031): called boinc_finish(0)

</stderr_txt>
]]>

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