Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:53:20 (749865): wrapper (7.7.26015): starting
16:53:20 (749865): wrapper: running run_atlas (--nthreads 4)
[2026-05-30 16:53:20] Arguments: --nthreads 4
[2026-05-30 16:53:20] Threads: 4
[2026-05-30 16:53:20] Checking for CVMFS
[2026-05-30 16:53:20] No cvmfs_config command found, will try listing directly
[2026-05-30 16:53:20] CVMFS is ok
[2026-05-30 16:53:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-30 16:53:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-30 16:53:20] Further information can be found at the LHC@home message board.
[2026-05-30 16:53:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-30 16:53:20] Checking for apptainer binary...
[2026-05-30 16:53:20] which: no apptainer in ((null))
[2026-05-30 16:53:20] apptainer is not installed, using version from CVMFS
[2026-05-30 16:53:20] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-30 16:53:20] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot100/slots/3/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2026-05-30 16:53:20] apptainer works
[2026-05-30 16:53:20] Set ATHENA_PROC_NUMBER=4
[2026-05-30 16:53:20] Set ATHENA_CORE_NUMBER=4
[2026-05-30 16:53:20] Starting ATLAS job with PandaID=7158596923
[2026-05-30 16:53:20] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot100/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-30 19:57:25]  *** The last 200 lines of the pilot log: ***
[2026-05-30 19:57:25] 2026-05-30 17:54:29,020 | INFO     | job 7158596923 has finished - writing final server update
[2026-05-30 19:57:25] 2026-05-30 17:54:29,021 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1918286/.job.ad'
[2026-05-30 19:57:25] 2026-05-30 17:54:29,021 | INFO     | total number of processed events: 400 (read)
[2026-05-30 19:57:25] 2026-05-30 17:54:29,046 | INFO     | using path: /var/lib/boinc/var/slot100/slots/3/PanDA_Pilot-7158596923/memory_monitor_summary.json (trf name=prmon)
[2026-05-30 19:57:25] 2026-05-30 17:54:29,046 | INFO     | extracted standard info from prmon json
[2026-05-30 19:57:25] 2026-05-30 17:54:29,046 | INFO     | extracted standard memory fields from prmon json
[2026-05-30 19:57:25] 2026-05-30 17:54:29,047 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-30 19:57:25] 2026-05-30 17:54:29,047 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-30 19:57:25] 2026-05-30 17:54:29,050 | INFO     | fitting pss+swap vs Time
[2026-05-30 19:57:25] 2026-05-30 17:54:29,050 | INFO     | sum of square deviations: 1748737904.5
[2026-05-30 19:57:25] 2026-05-30 17:54:29,052 | INFO     | sum of deviations: 14606703058.5
[2026-05-30 19:57:25] 2026-05-30 17:54:29,052 | INFO     | mean x (centered): 0.0
[2026-05-30 19:57:25] 2026-05-30 17:54:29,052 | INFO     | mean y: 2329072.7359550563
[2026-05-30 19:57:25] 2026-05-30 17:54:29,052 | INFO     | intersect: 2329072.7359550563
[2026-05-30 19:57:25] 2026-05-30 17:54:29,052 | INFO     | chi2: 2.19199354464419
[2026-05-30 19:57:25] 2026-05-30 17:54:29,053 | INFO     | sum of square deviations: 1605470102.0
[2026-05-30 19:57:25] 2026-05-30 17:54:29,054 | INFO     | sum of deviations: 25397891497.0
[2026-05-30 19:57:25] 2026-05-30 17:54:29,054 | INFO     | mean x (centered): 0.0
[2026-05-30 19:57:25] 2026-05-30 17:54:29,054 | INFO     | mean y: 2340284.034682081
[2026-05-30 19:57:25] 2026-05-30 17:54:29,054 | INFO     | intersect: 2340284.034682081
[2026-05-30 19:57:25] 2026-05-30 17:54:29,054 | INFO     | chi2: 1.382118254206383
[2026-05-30 19:57:25] 2026-05-30 17:54:29,054 | INFO     | current chi2=1.382118254206383 (change=36.946974247101075 %)
[2026-05-30 19:57:25] 2026-05-30 17:54:29,055 | INFO     | sum of square deviations: 1470248962.0
[2026-05-30 19:57:25] 2026-05-30 17:54:29,056 | INFO     | sum of deviations: 24619442315.0
[2026-05-30 19:57:25] 2026-05-30 17:54:29,056 | INFO     | mean x (centered): 0.0
[2026-05-30 19:57:25] 2026-05-30 17:54:29,056 | INFO     | mean y: 2339405.8214285714
[2026-05-30 19:57:25] 2026-05-30 17:54:29,056 | INFO     | intersect: 2339405.8214285714
[2026-05-30 19:57:25] 2026-05-30 17:54:29,056 | INFO     | chi2: 1.3828855781134546
[2026-05-30 19:57:25] 2026-05-30 17:54:29,056 | INFO     | current chi2=1.3828855781134546 (change=-0.05551796344026806 %)
[2026-05-30 19:57:25] 2026-05-30 17:54:29,056 | INFO     | right removable region: 167
[2026-05-30 19:57:25] 2026-05-30 17:54:29,057 | INFO     | sum of square deviations: 1605470102.0
[2026-05-30 19:57:25] 2026-05-30 17:54:29,058 | INFO     | sum of deviations: -9190768557.0
[2026-05-30 19:57:25] 2026-05-30 17:54:29,058 | INFO     | mean x (centered): 0.0
[2026-05-30 19:57:25] 2026-05-30 17:54:29,058 | INFO     | mean y: 2354055.971098266
[2026-05-30 19:57:25] 2026-05-30 17:54:29,058 | INFO     | intersect: 2354055.971098266
[2026-05-30 19:57:25] 2026-05-30 17:54:29,058 | INFO     | chi2: 0.8355393946685482
[2026-05-30 19:57:25] 2026-05-30 17:54:29,058 | INFO     | current chi2=0.8355393946685482 (change=61.88221463014503 %)
[2026-05-30 19:57:25] 2026-05-30 17:54:29,059 | INFO     | sum of square deviations: 1470248962.0
[2026-05-30 19:57:25] 2026-05-30 17:54:29,060 | INFO     | sum of deviations: -9980192798.0
[2026-05-30 19:57:25] 2026-05-30 17:54:29,060 | INFO     | mean x (centered): 0.0
[2026-05-30 19:57:25] 2026-05-30 17:54:29,060 | INFO     | mean y: 2354931.1666666665
[2026-05-30 19:57:25] 2026-05-30 17:54:29,060 | INFO     | intersect: 2354931.1666666665
[2026-05-30 19:57:25] 2026-05-30 17:54:29,060 | INFO     | chi2: 0.8335637136180198
[2026-05-30 19:57:25] 2026-05-30 17:54:29,060 | INFO     | current chi2=0.8335637136180198 (change=0.2364557629640076 %)
[2026-05-30 19:57:25] 2026-05-30 17:54:29,060 | INFO     | left removable region: 10
[2026-05-30 19:57:25] 2026-05-30 17:54:29,061 | INFO     | sum of square deviations: 1199940638.0
[2026-05-30 19:57:25] 2026-05-30 17:54:29,062 | INFO     | sum of deviations: 816879548.0
[2026-05-30 19:57:25] 2026-05-30 17:54:29,062 | INFO     | mean x (centered): 0.0
[2026-05-30 19:57:25] 2026-05-30 17:54:29,062 | INFO     | mean y: 2367540.0700636944
[2026-05-30 19:57:25] 2026-05-30 17:54:29,062 | INFO     | intersect: 2367540.0700636944
[2026-05-30 19:57:25] 2026-05-30 17:54:29,062 | INFO     | chi2: 0.0006244729079911521
[2026-05-30 19:57:25] 2026-05-30 17:54:29,062 | INFO     | current memory leak: 0.68 B/s (using 157 data points, chi2=0.00)
[2026-05-30 19:57:25] 2026-05-30 17:54:29,063 | INFO     | could have reported an average CPU frequency of 2713 MHz (10 samples)
[2026-05-30 19:57:25] 2026-05-30 17:54:29,063 | INFO     | ..............................
[2026-05-30 19:57:25] 2026-05-30 17:54:29,063 | INFO     | . Timing measurements:
[2026-05-30 19:57:25] 2026-05-30 17:54:29,063 | INFO     | . get job = 0 s
[2026-05-30 19:57:25] 2026-05-30 17:54:29,063 | INFO     | . initial setup = 8 s
[2026-05-30 19:57:25] 2026-05-30 17:54:29,063 | INFO     | . payload setup = 14 s
[2026-05-30 19:57:25] 2026-05-30 17:54:29,063 | INFO     | . stage-in = 0 s
[2026-05-30 19:57:25] 2026-05-30 17:54:29,063 | INFO     | . payload execution = 10812 s
[2026-05-30 19:57:25] 2026-05-30 17:54:29,064 | INFO     | . stage-out = 1 s
[2026-05-30 19:57:25] 2026-05-30 17:54:29,064 | INFO     | . log creation = 0 s
[2026-05-30 19:57:25] 2026-05-30 17:54:29,064 | INFO     | ..............................
[2026-05-30 19:57:25] 2026-05-30 17:54:29,155 | INFO     | 
[2026-05-30 19:57:25] 2026-05-30 17:54:29,156 | INFO     | job summary report
[2026-05-30 19:57:25] 2026-05-30 17:54:29,156 | INFO     | --------------------------------------------------
[2026-05-30 19:57:25] 2026-05-30 17:54:29,156 | INFO     | PanDA job id: 7158596923
[2026-05-30 19:57:25] 2026-05-30 17:54:29,156 | INFO     | task id: 50533997
[2026-05-30 19:57:25] 2026-05-30 17:54:29,156 | INFO     | errors: (none)
[2026-05-30 19:57:25] 2026-05-30 17:54:29,156 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-30 19:57:25] 2026-05-30 17:54:29,156 | INFO     | pilot state: finished 
[2026-05-30 19:57:25] 2026-05-30 17:54:29,156 | INFO     | transexitcode: 0
[2026-05-30 19:57:25] 2026-05-30 17:54:29,156 | INFO     | exeerrorcode: 0
[2026-05-30 19:57:25] 2026-05-30 17:54:29,156 | INFO     | exeerrordiag: 
[2026-05-30 19:57:25] 2026-05-30 17:54:29,157 | INFO     | exitcode: 0
[2026-05-30 19:57:25] 2026-05-30 17:54:29,157 | INFO     | exitmsg: OK
[2026-05-30 19:57:25] 2026-05-30 17:54:29,157 | INFO     | cpuconsumptiontime: 41492 s
[2026-05-30 19:57:25] 2026-05-30 17:54:29,157 | INFO     | nevents: 400
[2026-05-30 19:57:25] 2026-05-30 17:54:29,157 | INFO     | neventsw: 0
[2026-05-30 19:57:25] 2026-05-30 17:54:29,157 | INFO     | pid: 759888
[2026-05-30 19:57:25] 2026-05-30 17:54:29,157 | INFO     | pgrp: 759888
[2026-05-30 19:57:25] 2026-05-30 17:54:29,157 | INFO     | corecount: 4
[2026-05-30 19:57:25] 2026-05-30 17:54:29,157 | INFO     | event service: False
[2026-05-30 19:57:25] 2026-05-30 17:54:29,157 | INFO     | sizes: {0: 2265770, 1: 2267599, 11: 2267599, 10831: 2297136, 10832: 2306158, 10834: 2306536}
[2026-05-30 19:57:25] 2026-05-30 17:54:29,157 | INFO     | --------------------------------------------------
[2026-05-30 19:57:25] 2026-05-30 17:54:29,157 | INFO     | 
[2026-05-30 19:57:25] 2026-05-30 17:54:29,158 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot100/slots/3
[2026-05-30 19:57:25] 2026-05-30 17:54:29,186 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-30 19:57:25] 2026-05-30 17:54:29,186 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-30 19:57:25] 2026-05-30 17:54:29,186 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-30 19:57:25] 2026-05-30 17:54:29,186 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-30 19:57:25] 2026-05-30 17:54:29,186 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-30 19:57:25] 2026-05-30 17:54:29,186 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-30 19:57:25] 2026-05-30 17:54:29,187 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-30 19:57:25] 2026-05-30 17:54:29,187 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-30 19:57:25] 2026-05-30 17:54:29,187 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-30 19:57:25] 2026-05-30 17:54:29,187 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-30 19:57:25] 2026-05-30 17:54:29,187 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-30 19:57:25] 2026-05-30 17:54:29,187 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-30 19:57:25] 2026-05-30 17:54:29,187 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-30 19:57:25] 2026-05-30 17:54:29,187 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-30 19:57:25] 2026-05-30 17:54:29,187 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-30 19:57:25] 2026-05-30 17:54:29,187 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-30 19:57:25] 2026-05-30 17:54:29,187 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-30 19:57:25] 2026-05-30 17:54:29,188 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-30 19:57:25] 2026-05-30 17:54:29,188 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-30 19:57:25] 2026-05-30 17:54:29,188 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-30 19:57:25] 2026-05-30 17:54:29,188 | INFO     | job 7158596923 has completed (purged errors)
[2026-05-30 19:57:25] 2026-05-30 17:54:29,188 | INFO     | overall cleanup function is called
[2026-05-30 19:57:25] 2026-05-30 17:54:30,196 | INFO     | --- collectZombieJob: --- 10, [759888]
[2026-05-30 19:57:25] 2026-05-30 17:54:30,197 | INFO     | zombie collector waiting for pid 759888
[2026-05-30 19:57:25] 2026-05-30 17:54:30,197 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-30 19:57:25] 2026-05-30 17:54:30,197 | INFO     | collected zombie processes
[2026-05-30 19:57:25] 2026-05-30 17:54:30,197 | INFO     | will attempt to kill all subprocesses of pid=759888
[2026-05-30 19:57:25] 2026-05-30 17:54:30,896 | INFO     | process IDs to be killed: [759888] (in reverse order)
[2026-05-30 19:57:25] 2026-05-30 17:54:31,205 | WARNING  | found no corresponding commands to process id(s)
[2026-05-30 19:57:25] 2026-05-30 17:54:31,205 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-30 19:57:25] 2026-05-30 17:54:31,235 | INFO     | did not find any defunct processes belonging to 759888
[2026-05-30 19:57:25] 2026-05-30 17:54:31,260 | INFO     | did not find any defunct processes belonging to 759888
[2026-05-30 19:57:25] 2026-05-30 17:54:31,260 | INFO     | Ready for new job
[2026-05-30 19:57:25] 2026-05-30 17:54:31,262 | INFO     | ***************************************
[2026-05-30 19:57:25] 2026-05-30 17:54:31,262 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-30 19:57:25] 2026-05-30 17:54:31,262 | INFO     | ***************************************
[2026-05-30 19:57:25] 2026-05-30 17:54:31,263 | INFO     | 
[2026-05-30 19:57:25] 2026-05-30 17:54:31,270 | INFO     | architecture information:
[2026-05-30 19:57:25] 2026-05-30 17:54:31,271 | INFO     | executing command: cat /etc/os-release
[2026-05-30 19:57:25] 2026-05-30 17:54:31,292 | INFO     | cat /etc/os-release:
[2026-05-30 19:57:25] NAME="CentOS Linux"
[2026-05-30 19:57:25] VERSION="7 (Core)"
[2026-05-30 19:57:25] ID="centos"
[2026-05-30 19:57:25] ID_LIKE="rhel fedora"
[2026-05-30 19:57:25] VERSION_ID="7"
[2026-05-30 19:57:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-30 19:57:25] ANSI_COLOR="0;31"
[2026-05-30 19:57:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-30 19:57:25] HOME_URL="https://www.centos.org/"
[2026-05-30 19:57:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-30 19:57:25] 
[2026-05-30 19:57:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-30 19:57:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-30 19:57:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-30 19:57:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-30 19:57:25] 
[2026-05-30 19:57:25] 2026-05-30 17:54:31,293 | INFO     | ***************************************
[2026-05-30 19:57:25] 2026-05-30 17:54:31,796 | INFO     | executing command: df -mP /var/lib/boinc/var/slot100/slots/3
[2026-05-30 19:57:25] 2026-05-30 17:54:31,820 | INFO     | sufficient remaining disk space (321650688000 B)
[2026-05-30 19:57:25] 2026-05-30 17:54:31,820 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-30 19:57:25] 2026-05-30 17:54:31,820 | INFO     | current server update state: UPDATING_FINAL
[2026-05-30 19:57:25] 2026-05-30 17:54:31,820 | INFO     | update_server=False
[2026-05-30 19:57:25] 2026-05-30 17:54:31,820 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-30 19:57:25] 2026-05-30 17:54:31,923 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-30 19:57:25] 2026-05-30 17:54:31,924 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-30 19:57:25] 2026-05-30 17:54:31,924 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-30 19:57:25] 2026-05-30 17:54:31,924 | INFO     | will abort loop
[2026-05-30 19:57:25] 2026-05-30 17:54:31,964 | INFO     | job.realtimelogging is not enabled
[2026-05-30 19:57:25] 2026-05-30 17:54:32,245 | INFO     | all payload control threads have been joined
[2026-05-30 19:57:25] 2026-05-30 17:54:32,709 | INFO     | all data control threads have been joined
[2026-05-30 19:57:25] 2026-05-30 17:54:32,826 | INFO     | [job] retrieve thread has finished
[2026-05-30 19:57:25] 2026-05-30 17:54:32,845 | INFO     | [job] validate thread has finished
[2026-05-30 19:57:25] 2026-05-30 17:54:32,846 | INFO     | [job] create_data_payload thread has finished
[2026-05-30 19:57:25] 2026-05-30 17:54:32,902 | INFO     | [payload] failed_post thread has finished
[2026-05-30 19:57:25] 2026-05-30 17:54:32,924 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-30 19:57:25] 2026-05-30 17:54:32,929 | INFO     | [job] job monitor thread has finished
[2026-05-30 19:57:25] 2026-05-30 17:54:32,970 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-30 19:57:25] 2026-05-30 17:54:33,115 | INFO     | [payload] execute_payloads thread has finished
[2026-05-30 19:57:25] 2026-05-30 17:54:33,251 | INFO     | [payload] control thread has finished
[2026-05-30 19:57:25] 2026-05-30 17:54:33,270 | INFO     | [payload] validate_pre thread has finished
[2026-05-30 19:57:25] 2026-05-30 17:54:33,461 | INFO     | all job control threads have been joined
[2026-05-30 19:57:25] 2026-05-30 17:54:33,575 | INFO     | [data] copytool_in thread has finished
[2026-05-30 19:57:25] 2026-05-30 17:54:33,714 | INFO     | [data] control thread has finished
[2026-05-30 19:57:25] 2026-05-30 17:54:33,725 | INFO     | [payload] validate_post thread has finished
[2026-05-30 19:57:25] 2026-05-30 17:54:34,165 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-30 19:57:25] 2026-05-30 17:54:34,466 | INFO     | [job] control thread has finished
[2026-05-30 19:57:25] 2026-05-30 17:54:34,929 | INFO     | [data] copytool_out thread has finished
[2026-05-30 19:57:25] 2026-05-30 17:54:35,022 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-30 19:57:25] 2026-05-30 17:54:35,170 | INFO     | [job] queue monitor thread has finished
[2026-05-30 19:57:25] 2026-05-30 17:54:39,027 | INFO     | [data] queue_monitor thread has finished
[2026-05-30 19:57:25] 2026-05-30 17:55:00,853 | INFO     | [monitor] cgroup control has ended
[2026-05-30 19:57:25] 2026-05-30 17:55:01,874 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22640057448256)>', '<ExcThread(monitor, started 22639744907008)>']
[2026-05-30 19:57:25] 2026-05-30 17:55:02,792 | INFO     | PID=754444 has CPU usage=9.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-05-30 19:57:25] 2026-05-30 17:55:02,792 | INFO     | .. there are 17 such processes running
[2026-05-30 19:57:25] 2026-05-30 17:55:02,793 | INFO     | found 0 job(s) in 20 queues
[2026-05-30 19:57:25] 2026-05-30 17:55:02,793 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-30 19:57:25] 2026-05-30 17:55:02,793 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-30 19:57:25] 2026-05-30 17:55:02,793 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-30 19:57:25] 2026-05-30 17:55:02,793 | INFO     | [monitor] control thread has ended
[2026-05-30 19:57:25] 2026-05-30 17:55:06,898 | INFO     | all workflow threads have been joined
[2026-05-30 19:57:25] 2026-05-30 17:55:06,899 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-30 19:57:25] 2026-05-30 17:55:06,899 | INFO     | traces error code: 0
[2026-05-30 19:57:25] 2026-05-30 17:55:06,899 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-30 19:57:25] 2026-05-30 17:55:07,041 [wrapper] ==== pilot stdout END ====
[2026-05-30 19:57:25] 2026-05-30 17:55:07,046 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-30 19:57:25] 2026-05-30 17:55:07,051 [wrapper] pilotpid: 754444
[2026-05-30 19:57:25] 2026-05-30 17:55:07,055 [wrapper] Pilot exit status: 0
[2026-05-30 19:57:25] 2026-05-30 17:55:07,072 [wrapper] pandaids: 7158596923
[2026-05-30 19:57:25] 2026-05-30 17:55:07,278 [wrapper] cleanup supervisor_pilot 1149420 754445
[2026-05-30 19:57:25] 2026-05-30 17:55:07,283 [wrapper] Test setup, not cleaning
[2026-05-30 19:57:25] 2026-05-30 17:55:07,288 [wrapper] apfmon messages muted
[2026-05-30 19:57:25] 2026-05-30 17:55:07,292 [wrapper] ==== wrapper stdout END ====
[2026-05-30 19:57:25] 2026-05-30 17:55:07,295 [wrapper] ==== wrapper stderr END ====
[2026-05-30 19:57:25]  *** Error codes and diagnostics ***
[2026-05-30 19:57:25]     "exeErrorCode": 0,
[2026-05-30 19:57:25]     "pilotErrorCode": 0,
[2026-05-30 19:57:25]  *** Listing of results directory ***
[2026-05-30 19:57:25] total 552380
[2026-05-30 19:57:25] -rw-r--r--. 1 boinc boinc    683926 May 30 11:52 pilot3.tar.gz
[2026-05-30 19:57:25] -rwx------. 1 boinc boinc     36281 May 30 11:55 runpilot2-wrapper.sh
[2026-05-30 19:57:25] -rw-r--r--. 1 boinc boinc      5631 May 30 11:57 queuedata.json
[2026-05-30 19:57:25] -rw-r--r--. 1 boinc boinc       100 May 30 16:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-30 19:57:25] -rwxr-xr-x. 1 boinc boinc      7986 May 30 16:53 run_atlas
[2026-05-30 19:57:25] -rw-r--r--. 1 boinc boinc       105 May 30 16:53 job.xml
[2026-05-30 19:57:25] -rw-r--r--. 2 boinc boinc 315269791 May 30 16:53 EVNT.50532964._000172.pool.root.1
[2026-05-30 19:57:25] -rw-r--r--. 1 boinc boinc      6543 May 30 16:53 init_data.xml
[2026-05-30 19:57:25] -rw-r--r--. 2 boinc boinc    697419 May 30 16:53 input.tar.gz
[2026-05-30 19:57:25] -rw-r--r--. 2 boinc boinc     15667 May 30 16:53 start_atlas.sh
[2026-05-30 19:57:25] drwxrwx--x. 2 boinc boinc      4096 May 30 16:53 shared
[2026-05-30 19:57:25] -rw-r--r--. 1 boinc boinc         0 May 30 16:53 boinc_lockfile
[2026-05-30 19:57:25] -rw-r--r--. 1 boinc boinc      2514 May 30 16:53 pandaJob.out
[2026-05-30 19:57:25] -rw-------. 1 boinc boinc    995585 May 30 16:53 agis_schedconf.cvmfs.json
[2026-05-30 19:57:25] -rw-------. 1 boinc boinc       444 May 30 16:53 workernode_map.json
[2026-05-30 19:57:25] drwx------. 5 boinc boinc      4096 May 30 16:53 pilot3
[2026-05-30 19:57:25] -rw-r--r--. 1 boinc boinc       486 May 30 19:53 boinc_task_state.xml
[2026-05-30 19:57:25] -rw-------. 1 boinc boinc 243575595 May 30 19:53 HITS.50533997._003294.pool.root.1
[2026-05-30 19:57:25] -rw-------. 1 boinc boinc      1031 May 30 19:54 memory_monitor_summary.json
[2026-05-30 19:57:25] -rw-------. 1 boinc boinc        95 May 30 19:54 pilot_heartbeat.json
[2026-05-30 19:57:25] -rw-------. 1 boinc boinc   1502789 May 30 19:54 agis_ddmendpoints.agis.ALL.json
[2026-05-30 19:57:25] -rw-------. 1 boinc boinc    313975 May 30 19:54 log.50533997._003294.job.log.tgz.1
[2026-05-30 19:57:25] -rw-------. 1 boinc boinc      6378 May 30 19:54 heartbeat_new.json
[2026-05-30 19:57:25] -rw-------. 1 boinc boinc      6269 May 30 19:54 heartbeat.json
[2026-05-30 19:57:25] -rw-------. 1 boinc boinc      5091 May 30 19:55 pilotlog.txt
[2026-05-30 19:57:25] -rw-------. 1 boinc boinc   1017910 May 30 19:55 log.50533997._003294.job.log.1
[2026-05-30 19:57:25] -rw-------. 1 boinc boinc       357 May 30 19:55 output.list
[2026-05-30 19:57:25] -rw-r--r--. 1 boinc boinc       410 May 30 19:55 runtime_log
[2026-05-30 19:57:25] -rw-------. 1 boinc boinc   1351680 May 30 19:55 result.tar.gz
[2026-05-30 19:57:25] -rw-r--r--. 1 boinc boinc      8845 May 30 19:55 runtime_log.err
[2026-05-30 19:57:25] -rw-------. 1 boinc boinc       665 May 30 19:55 b416186eac2e.diag
[2026-05-30 19:57:25] -rw-r--r--. 1 boinc boinc        26 May 30 19:57 wrapper_checkpoint.txt
[2026-05-30 19:57:25] -rw-r--r--. 1 boinc boinc      8192 May 30 19:57 boinc_mmap_file
[2026-05-30 19:57:25] -rw-r--r--. 1 boinc boinc     20782 May 30 19:57 stderr.txt
[2026-05-30 19:57:25] HITS file was successfully produced:
[2026-05-30 19:57:25] -rw-------. 1 boinc boinc 243575595 May 30 19:53 shared/HITS.pool.root.1
[2026-05-30 19:57:25]  *** Contents of shared directory: ***
[2026-05-30 19:57:25] total 547780
[2026-05-30 19:57:25] -rw-r--r--. 2 boinc boinc 315269791 May 30 16:53 ATLAS.root_0
[2026-05-30 19:57:25] -rw-r--r--. 2 boinc boinc    697419 May 30 16:53 input.tar.gz
[2026-05-30 19:57:25] -rw-r--r--. 2 boinc boinc     15667 May 30 16:53 start_atlas.sh
[2026-05-30 19:57:25] -rw-------. 1 boinc boinc 243575595 May 30 19:53 HITS.pool.root.1
[2026-05-30 19:57:25] -rw-------. 1 boinc boinc   1351680 May 30 19:55 result.tar.gz
19:57:26 (749865): run_atlas exited; CPU time 42138.820427
19:57:26 (749865): called boinc_finish(0)

</stderr_txt>
]]>

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