Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:02:36 (820501): wrapper (7.7.26015): starting
17:02:36 (820501): wrapper: running run_atlas (--nthreads 4)
[2026-05-30 17:02:36] Arguments: --nthreads 4
[2026-05-30 17:02:36] Threads: 4
[2026-05-30 17:02:36] Checking for CVMFS
[2026-05-30 17:02:36] No cvmfs_config command found, will try listing directly
[2026-05-30 17:02:36] CVMFS is ok
[2026-05-30 17:02:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-30 17:02:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-30 17:02:36] Further information can be found at the LHC@home message board.
[2026-05-30 17:02:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-30 17:02:36] Checking for apptainer binary...
[2026-05-30 17:02:36] which: no apptainer in ((null))
[2026-05-30 17:02:36] apptainer is not installed, using version from CVMFS
[2026-05-30 17:02:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-30 17:02:36] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot60/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2026-05-30 17:02:36] apptainer works
[2026-05-30 17:02:36] Set ATHENA_PROC_NUMBER=4
[2026-05-30 17:02:36] Set ATHENA_CORE_NUMBER=4
[2026-05-30 17:02:36] Starting ATLAS job with PandaID=7158758710
[2026-05-30 17:02:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot60/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-30 20:03:56]  *** The last 200 lines of the pilot log: ***
[2026-05-30 20:03:56] 2026-05-30 17:56:27,009 | INFO     | chi2: 0.0005616100042723294
[2026-05-30 20:03:56] 2026-05-30 17:56:27,009 | INFO     | current chi2=0.0005616100042723294 (change=59.819529244596694 %)
[2026-05-30 20:03:56] 2026-05-30 17:56:27,010 | INFO     | sum of square deviations: 1046484737.5
[2026-05-30 20:03:56] 2026-05-30 17:56:27,010 | INFO     | sum of deviations: 705764845.4999999
[2026-05-30 20:03:56] 2026-05-30 17:56:27,011 | INFO     | mean x (centered): 0.0
[2026-05-30 20:03:56] 2026-05-30 17:56:27,011 | INFO     | mean y: 2366641.513333333
[2026-05-30 20:03:56] 2026-05-30 17:56:27,011 | INFO     | intersect: 2366641.513333333
[2026-05-30 20:03:56] 2026-05-30 17:56:27,011 | INFO     | chi2: 0.0003555022504163222
[2026-05-30 20:03:56] 2026-05-30 17:56:27,011 | INFO     | current chi2=0.0003555022504163222 (change=36.699444861752106 %)
[2026-05-30 20:03:56] 2026-05-30 17:56:27,011 | INFO     | sum of square deviations: 945282840.0
[2026-05-30 20:03:56] 2026-05-30 17:56:27,012 | INFO     | sum of deviations: 420344289.99999994
[2026-05-30 20:03:56] 2026-05-30 17:56:27,012 | INFO     | mean x (centered): 0.0
[2026-05-30 20:03:56] 2026-05-30 17:56:27,012 | INFO     | mean y: 2367071.103448276
[2026-05-30 20:03:56] 2026-05-30 17:56:27,012 | INFO     | intersect: 2367071.103448276
[2026-05-30 20:03:56] 2026-05-30 17:56:27,013 | INFO     | chi2: 0.0002622609029061674
[2026-05-30 20:03:56] 2026-05-30 17:56:27,013 | INFO     | current chi2=0.0002622609029061674 (change=26.228061116620655 %)
[2026-05-30 20:03:56] 2026-05-30 17:56:27,013 | INFO     | sum of square deviations: 850825255.0
[2026-05-30 20:03:56] 2026-05-30 17:56:27,014 | INFO     | sum of deviations: 159075617.0
[2026-05-30 20:03:56] 2026-05-30 17:56:27,014 | INFO     | mean x (centered): 0.0
[2026-05-30 20:03:56] 2026-05-30 17:56:27,014 | INFO     | mean y: 2367493.0714285714
[2026-05-30 20:03:56] 2026-05-30 17:56:27,014 | INFO     | intersect: 2367493.0714285714
[2026-05-30 20:03:56] 2026-05-30 17:56:27,014 | INFO     | chi2: 0.00016098741294022563
[2026-05-30 20:03:56] 2026-05-30 17:56:27,015 | INFO     | current chi2=0.00016098741294022563 (change=38.615549951864445 %)
[2026-05-30 20:03:56] 2026-05-30 17:56:27,015 | INFO     | sum of square deviations: 762879420.0
[2026-05-30 20:03:56] 2026-05-30 17:56:27,015 | INFO     | sum of deviations: -111112231.99999997
[2026-05-30 20:03:56] 2026-05-30 17:56:27,016 | INFO     | mean x (centered): 0.0
[2026-05-30 20:03:56] 2026-05-30 17:56:27,016 | INFO     | mean y: 2367961.7851851853
[2026-05-30 20:03:56] 2026-05-30 17:56:27,016 | INFO     | intersect: 2367961.7851851853
[2026-05-30 20:03:56] 2026-05-30 17:56:27,016 | INFO     | chi2: 1.5149327926267468e-05
[2026-05-30 20:03:56] 2026-05-30 17:56:27,016 | INFO     | current chi2=1.5149327926267468e-05 (change=90.58974385041371 %)
[2026-05-30 20:03:56] 2026-05-30 17:56:27,016 | INFO     | sum of square deviations: 681212772.5
[2026-05-30 20:03:56] 2026-05-30 17:56:27,017 | INFO     | sum of deviations: -122236527.49999999
[2026-05-30 20:03:56] 2026-05-30 17:56:27,017 | INFO     | mean x (centered): 0.0
[2026-05-30 20:03:56] 2026-05-30 17:56:27,017 | INFO     | mean y: 2367982.5615384616
[2026-05-30 20:03:56] 2026-05-30 17:56:27,017 | INFO     | intersect: 2367982.5615384616
[2026-05-30 20:03:56] 2026-05-30 17:56:27,017 | INFO     | chi2: 1.3853690492962877e-05
[2026-05-30 20:03:56] 2026-05-30 17:56:27,017 | INFO     | current chi2=1.3853690492962877e-05 (change=8.552441663488459 %)
[2026-05-30 20:03:56] 2026-05-30 17:56:27,017 | INFO     | left removable region: 40
[2026-05-30 20:03:56] 2026-05-30 17:56:27,018 | INFO     | sum of square deviations: 591173875.0
[2026-05-30 20:03:56] 2026-05-30 17:56:27,018 | INFO     | sum of deviations: -117565635.49999997
[2026-05-30 20:03:56] 2026-05-30 17:56:27,018 | INFO     | mean x (centered): 0.0
[2026-05-30 20:03:56] 2026-05-30 17:56:27,018 | INFO     | mean y: 2367991.943548387
[2026-05-30 20:03:56] 2026-05-30 17:56:27,019 | INFO     | intersect: 2367991.943548387
[2026-05-30 20:03:56] 2026-05-30 17:56:27,019 | INFO     | chi2: 1.353616198166683e-05
[2026-05-30 20:03:56] 2026-05-30 17:56:27,019 | INFO     | current memory leak: -0.20 B/s (using 124 data points, chi2=0.00)
[2026-05-30 20:03:56] 2026-05-30 17:56:27,020 | INFO     | could have reported an average CPU frequency of 2745 MHz (9 samples)
[2026-05-30 20:03:56] 2026-05-30 17:56:27,020 | INFO     | ..............................
[2026-05-30 20:03:56] 2026-05-30 17:56:27,020 | INFO     | . Timing measurements:
[2026-05-30 20:03:56] 2026-05-30 17:56:27,020 | INFO     | . get job = 0 s
[2026-05-30 20:03:56] 2026-05-30 17:56:27,020 | INFO     | . initial setup = 8 s
[2026-05-30 20:03:56] 2026-05-30 17:56:27,020 | INFO     | . payload setup = 13 s
[2026-05-30 20:03:56] 2026-05-30 17:56:27,020 | INFO     | . stage-in = 0 s
[2026-05-30 20:03:56] 2026-05-30 17:56:27,020 | INFO     | . payload execution = 10376 s
[2026-05-30 20:03:56] 2026-05-30 17:56:27,020 | INFO     | . stage-out = 1 s
[2026-05-30 20:03:56] 2026-05-30 17:56:27,020 | INFO     | . log creation = 0 s
[2026-05-30 20:03:56] 2026-05-30 17:56:27,020 | INFO     | ..............................
[2026-05-30 20:03:56] 2026-05-30 17:56:27,177 | INFO     | PID=825017 has CPU usage=11.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-30 20:03:56] 2026-05-30 17:56:27,177 | INFO     | .. there are 15 such processes running
[2026-05-30 20:03:56] 2026-05-30 17:56:27,232 | INFO     | 
[2026-05-30 20:03:56] 2026-05-30 17:56:27,232 | INFO     | job summary report
[2026-05-30 20:03:56] 2026-05-30 17:56:27,232 | INFO     | --------------------------------------------------
[2026-05-30 20:03:56] 2026-05-30 17:56:27,232 | INFO     | PanDA job id: 7158758710
[2026-05-30 20:03:56] 2026-05-30 17:56:27,233 | INFO     | task id: 50533940
[2026-05-30 20:03:56] 2026-05-30 17:56:27,233 | INFO     | errors: (none)
[2026-05-30 20:03:56] 2026-05-30 17:56:27,233 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-30 20:03:56] 2026-05-30 17:56:27,233 | INFO     | pilot state: finished 
[2026-05-30 20:03:56] 2026-05-30 17:56:27,233 | INFO     | transexitcode: 0
[2026-05-30 20:03:56] 2026-05-30 17:56:27,233 | INFO     | exeerrorcode: 0
[2026-05-30 20:03:56] 2026-05-30 17:56:27,233 | INFO     | exeerrordiag: 
[2026-05-30 20:03:56] 2026-05-30 17:56:27,233 | INFO     | exitcode: 0
[2026-05-30 20:03:56] 2026-05-30 17:56:27,233 | INFO     | exitmsg: OK
[2026-05-30 20:03:56] 2026-05-30 17:56:27,233 | INFO     | cpuconsumptiontime: 39773 s
[2026-05-30 20:03:56] 2026-05-30 17:56:27,233 | INFO     | nevents: 400
[2026-05-30 20:03:56] 2026-05-30 17:56:27,233 | INFO     | neventsw: 0
[2026-05-30 20:03:56] 2026-05-30 17:56:27,233 | INFO     | pid: 830827
[2026-05-30 20:03:56] 2026-05-30 17:56:27,234 | INFO     | pgrp: 830827
[2026-05-30 20:03:56] 2026-05-30 17:56:27,234 | INFO     | corecount: 4
[2026-05-30 20:03:56] 2026-05-30 17:56:27,234 | INFO     | event service: False
[2026-05-30 20:03:56] 2026-05-30 17:56:27,234 | INFO     | sizes: {0: 2265765, 1: 2267594, 11: 2267594, 10394: 2296733, 10396: 2306011}
[2026-05-30 20:03:56] 2026-05-30 17:56:27,234 | INFO     | --------------------------------------------------
[2026-05-30 20:03:56] 2026-05-30 17:56:27,234 | INFO     | 
[2026-05-30 20:03:56] 2026-05-30 17:56:27,234 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot60/slots/2
[2026-05-30 20:03:56] 2026-05-30 17:56:27,269 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-30 20:03:56] 2026-05-30 17:56:27,269 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-30 20:03:56] 2026-05-30 17:56:27,269 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-30 20:03:56] 2026-05-30 17:56:27,269 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-30 20:03:56] 2026-05-30 17:56:27,270 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-30 20:03:56] 2026-05-30 17:56:27,270 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-30 20:03:56] 2026-05-30 17:56:27,270 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-30 20:03:56] 2026-05-30 17:56:27,270 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-30 20:03:56] 2026-05-30 17:56:27,270 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-30 20:03:56] 2026-05-30 17:56:27,270 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-30 20:03:56] 2026-05-30 17:56:27,270 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-30 20:03:56] 2026-05-30 17:56:27,270 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-30 20:03:56] 2026-05-30 17:56:27,270 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-30 20:03:56] 2026-05-30 17:56:27,270 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-30 20:03:56] 2026-05-30 17:56:27,270 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-30 20:03:56] 2026-05-30 17:56:27,271 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-30 20:03:56] 2026-05-30 17:56:27,271 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-30 20:03:56] 2026-05-30 17:56:27,271 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-30 20:03:56] 2026-05-30 17:56:27,271 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-30 20:03:56] 2026-05-30 17:56:27,271 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-30 20:03:56] 2026-05-30 17:56:27,271 | INFO     | job 7158758710 has completed (purged errors)
[2026-05-30 20:03:56] 2026-05-30 17:56:27,271 | INFO     | overall cleanup function is called
[2026-05-30 20:03:56] 2026-05-30 17:56:27,761 | WARNING  | process 830827 can no longer be monitored (due to stat problems) - aborting
[2026-05-30 20:03:56] 2026-05-30 17:56:28,282 | INFO     | --- collectZombieJob: --- 10, [830827]
[2026-05-30 20:03:56] 2026-05-30 17:56:28,283 | INFO     | zombie collector waiting for pid 830827
[2026-05-30 20:03:56] 2026-05-30 17:56:28,283 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-30 20:03:56] 2026-05-30 17:56:28,283 | INFO     | collected zombie processes
[2026-05-30 20:03:56] 2026-05-30 17:56:28,283 | INFO     | will attempt to kill all subprocesses of pid=830827
[2026-05-30 20:03:56] 2026-05-30 17:56:28,541 | INFO     | using path: /var/lib/boinc/var/slot60/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-05-30 20:03:56] 2026-05-30 17:56:28,542 | INFO     | using path: /var/lib/boinc/var/slot60/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-05-30 20:03:56] 2026-05-30 17:56:28,543 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-05-30 20:03:56] 2026-05-30 17:56:28,543 | WARNING  | maxPSS not found in memory monitor output
[2026-05-30 20:03:56] 2026-05-30 17:56:30,136 | INFO     | process IDs to be killed: [830827] (in reverse order)
[2026-05-30 20:03:56] 2026-05-30 17:56:30,193 | INFO     | number of running child processes to parent process 830827: 1
[2026-05-30 20:03:56] 2026-05-30 17:56:30,194 | INFO     | maximum number of monitored processes: 6
[2026-05-30 20:03:56] 2026-05-30 17:56:30,194 | INFO     | aborting job monitoring since job object (job id=7158758710) has expired
[2026-05-30 20:03:56] 2026-05-30 17:56:30,441 | WARNING  | found no corresponding commands to process id(s)
[2026-05-30 20:03:56] 2026-05-30 17:56:30,441 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-30 20:03:56] 2026-05-30 17:56:30,474 | INFO     | did not find any defunct processes belonging to 830827
[2026-05-30 20:03:56] 2026-05-30 17:56:30,505 | INFO     | did not find any defunct processes belonging to 830827
[2026-05-30 20:03:56] 2026-05-30 17:56:30,505 | INFO     | Ready for new job
[2026-05-30 20:03:56] 2026-05-30 17:56:30,508 | INFO     | ***************************************
[2026-05-30 20:03:56] 2026-05-30 17:56:30,508 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-30 20:03:56] 2026-05-30 17:56:30,508 | INFO     | ***************************************
[2026-05-30 20:03:56] 2026-05-30 17:56:30,508 | INFO     | 
[2026-05-30 20:03:56] 2026-05-30 17:56:30,516 | INFO     | architecture information:
[2026-05-30 20:03:56] 2026-05-30 17:56:30,516 | INFO     | executing command: cat /etc/os-release
[2026-05-30 20:03:56] 2026-05-30 17:56:30,542 | INFO     | cat /etc/os-release:
[2026-05-30 20:03:56] NAME="CentOS Linux"
[2026-05-30 20:03:56] VERSION="7 (Core)"
[2026-05-30 20:03:56] ID="centos"
[2026-05-30 20:03:56] ID_LIKE="rhel fedora"
[2026-05-30 20:03:56] VERSION_ID="7"
[2026-05-30 20:03:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-30 20:03:56] ANSI_COLOR="0;31"
[2026-05-30 20:03:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-30 20:03:56] HOME_URL="https://www.centos.org/"
[2026-05-30 20:03:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-30 20:03:56] 
[2026-05-30 20:03:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-30 20:03:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-30 20:03:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-30 20:03:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-30 20:03:56] 
[2026-05-30 20:03:56] 2026-05-30 17:56:30,542 | INFO     | ***************************************
[2026-05-30 20:03:56] 2026-05-30 17:56:31,044 | INFO     | executing command: df -mP /var/lib/boinc/var/slot60/slots/2
[2026-05-30 20:03:56] 2026-05-30 17:56:31,070 | INFO     | sufficient remaining disk space (310634348544 B)
[2026-05-30 20:03:56] 2026-05-30 17:56:31,071 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-30 20:03:56] 2026-05-30 17:56:31,071 | INFO     | current server update state: UPDATING_FINAL
[2026-05-30 20:03:56] 2026-05-30 17:56:31,071 | INFO     | update_server=False
[2026-05-30 20:03:56] 2026-05-30 17:56:31,071 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-30 20:03:56] 2026-05-30 17:56:31,072 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-30 20:03:56] 2026-05-30 17:56:31,072 | INFO     | will abort loop
[2026-05-30 20:03:56] 2026-05-30 17:56:31,263 | INFO     | all payload control threads have been joined
[2026-05-30 20:03:56] 2026-05-30 17:56:31,630 | INFO     | all data control threads have been joined
[2026-05-30 20:03:56] 2026-05-30 17:56:32,076 | INFO     | [job] retrieve thread has finished
[2026-05-30 20:03:56] 2026-05-30 17:56:32,077 | INFO     | [job] job monitor thread has finished
[2026-05-30 20:03:56] 2026-05-30 17:56:32,122 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-30 20:03:56] 2026-05-30 17:56:32,127 | INFO     | [data] copytool_in thread has finished
[2026-05-30 20:03:56] 2026-05-30 17:56:32,234 | INFO     | all job control threads have been joined
[2026-05-30 20:03:56] 2026-05-30 17:56:32,269 | INFO     | [payload] control thread has finished
[2026-05-30 20:03:56] 2026-05-30 17:56:32,348 | INFO     | [payload] execute_payloads thread has finished
[2026-05-30 20:03:56] 2026-05-30 17:56:32,368 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-30 20:03:56] 2026-05-30 17:56:32,408 | INFO     | [payload] failed_post thread has finished
[2026-05-30 20:03:56] 2026-05-30 17:56:32,635 | INFO     | [data] control thread has finished
[2026-05-30 20:03:56] 2026-05-30 17:56:32,836 | INFO     | [payload] validate_post thread has finished
[2026-05-30 20:03:56] 2026-05-30 17:56:32,937 | INFO     | [job] validate thread has finished
[2026-05-30 20:03:56] 2026-05-30 17:56:32,959 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-30 20:03:56] 2026-05-30 17:56:33,094 | INFO     | [job] create_data_payload thread has finished
[2026-05-30 20:03:56] 2026-05-30 17:56:33,102 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-30 20:03:56] 2026-05-30 17:56:33,127 | INFO     | [job] queue monitor thread has finished
[2026-05-30 20:03:56] 2026-05-30 17:56:33,239 | INFO     | [job] control thread has finished
[2026-05-30 20:03:56] 2026-05-30 17:56:33,391 | INFO     | [payload] validate_pre thread has finished
[2026-05-30 20:03:56] 2026-05-30 17:56:34,374 | INFO     | [data] copytool_out thread has finished
[2026-05-30 20:03:56] 2026-05-30 17:56:36,965 | INFO     | [data] queue_monitor thread has finished
[2026-05-30 20:03:56] 2026-05-30 17:57:00,252 | INFO     | PID=825017 has CPU usage=19.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-30 20:03:56] 2026-05-30 17:57:00,252 | INFO     | .. there are 15 such processes running
[2026-05-30 20:03:56] 2026-05-30 17:57:00,254 | INFO     | found 0 job(s) in 20 queues
[2026-05-30 20:03:56] 2026-05-30 17:57:00,254 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-30 20:03:56] 2026-05-30 17:57:00,254 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-30 20:03:56] 2026-05-30 17:57:16,071 | INFO     | [monitor] cgroup control has ended
[2026-05-30 20:03:56] 2026-05-30 17:57:17,595 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23392270526272)>', '<ExcThread(monitor, started 23392031086336)>']
[2026-05-30 20:03:56] 2026-05-30 17:57:18,341 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-30 20:03:56] 2026-05-30 17:57:18,341 | INFO     | [monitor] control thread has ended
[2026-05-30 20:03:56] 2026-05-30 17:57:22,621 | INFO     | all workflow threads have been joined
[2026-05-30 20:03:56] 2026-05-30 17:57:22,621 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-30 20:03:56] 2026-05-30 17:57:22,622 | INFO     | traces error code: 0
[2026-05-30 20:03:56] 2026-05-30 17:57:22,622 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-30 20:03:56] 2026-05-30 17:57:22,844 [wrapper] ==== pilot stdout END ====
[2026-05-30 20:03:56] 2026-05-30 17:57:22,848 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-30 20:03:56] 2026-05-30 17:57:22,853 [wrapper] pilotpid: 825017
[2026-05-30 20:03:56] 2026-05-30 17:57:22,857 [wrapper] Pilot exit status: 0
[2026-05-30 20:03:56] 2026-05-30 17:57:22,873 [wrapper] pandaids: 7158758710
[2026-05-30 20:03:56] 2026-05-30 17:57:23,075 [wrapper] cleanup supervisor_pilot 1184427 825018
[2026-05-30 20:03:56] 2026-05-30 17:57:23,080 [wrapper] Test setup, not cleaning
[2026-05-30 20:03:56] 2026-05-30 17:57:23,084 [wrapper] apfmon messages muted
[2026-05-30 20:03:56] 2026-05-30 17:57:23,088 [wrapper] ==== wrapper stdout END ====
[2026-05-30 20:03:56] 2026-05-30 17:57:23,092 [wrapper] ==== wrapper stderr END ====
[2026-05-30 20:03:56]  *** Error codes and diagnostics ***
[2026-05-30 20:03:56]     "exeErrorCode": 0,
[2026-05-30 20:03:56]     "pilotErrorCode": 0,
[2026-05-30 20:03:56]  *** Listing of results directory ***
[2026-05-30 20:03:56] total 549580
[2026-05-30 20:03:56] -rw-r--r--. 1 boinc boinc    683926 May 30 11:52 pilot3.tar.gz
[2026-05-30 20:03:56] -rw-r--r--. 1 boinc boinc      5631 May 30 11:53 queuedata.json
[2026-05-30 20:03:56] -rwx------. 1 boinc boinc     36281 May 30 11:53 runpilot2-wrapper.sh
[2026-05-30 20:03:56] -rw-r--r--. 1 boinc boinc       100 May 30 15:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-30 20:03:56] -rwxr-xr-x. 1 boinc boinc      7986 May 30 15:52 run_atlas
[2026-05-30 20:03:56] -rw-r--r--. 1 boinc boinc       105 May 30 15:52 job.xml
[2026-05-30 20:03:56] -rw-r--r--. 2 boinc boinc 310478417 May 30 17:02 EVNT.50532940._000413.pool.root.1
[2026-05-30 20:03:56] -rw-r--r--. 1 boinc boinc      6540 May 30 17:02 init_data.xml
[2026-05-30 20:03:56] -rw-r--r--. 2 boinc boinc     15667 May 30 17:02 start_atlas.sh
[2026-05-30 20:03:56] drwxrwx--x. 2 boinc boinc      4096 May 30 17:02 shared
[2026-05-30 20:03:56] -rw-r--r--. 2 boinc boinc    697408 May 30 17:02 input.tar.gz
[2026-05-30 20:03:56] -rw-r--r--. 1 boinc boinc         0 May 30 17:02 boinc_lockfile
[2026-05-30 20:03:56] -rw-r--r--. 1 boinc boinc      2511 May 30 17:02 pandaJob.out
[2026-05-30 20:03:56] -rw-------. 1 boinc boinc    995585 May 30 17:02 agis_schedconf.cvmfs.json
[2026-05-30 20:03:56] -rw-------. 1 boinc boinc   1502789 May 30 17:02 agis_ddmendpoints.agis.ALL.json
[2026-05-30 20:03:56] -rw-------. 1 boinc boinc       443 May 30 17:02 workernode_map.json
[2026-05-30 20:03:56] drwx------. 5 boinc boinc      4096 May 30 17:03 pilot3
[2026-05-30 20:03:56] -rw-------. 1 boinc boinc 245640706 May 30 19:55 HITS.50533940._009003.pool.root.1
[2026-05-30 20:03:56] -rw-r--r--. 1 boinc boinc       486 May 30 19:55 boinc_task_state.xml
[2026-05-30 20:03:56] -rw-------. 1 boinc boinc      1035 May 30 19:56 memory_monitor_summary.json
[2026-05-30 20:03:56] -rw-------. 1 boinc boinc    290547 May 30 19:56 log.50533940._009003.job.log.tgz.1
[2026-05-30 20:03:56] -rw-------. 1 boinc boinc      6377 May 30 19:56 heartbeat_new.json
[2026-05-30 20:03:56] -rw-------. 1 boinc boinc      6268 May 30 19:56 heartbeat.json
[2026-05-30 20:03:56] -rw-------. 1 boinc boinc        95 May 30 19:57 pilot_heartbeat.json
[2026-05-30 20:03:56] -rw-------. 1 boinc boinc      4835 May 30 19:57 pilotlog.txt
[2026-05-30 20:03:56] -rw-------. 1 boinc boinc    974174 May 30 19:57 log.50533940._009003.job.log.1
[2026-05-30 20:03:56] -rw-------. 1 boinc boinc       357 May 30 19:57 output.list
[2026-05-30 20:03:56] -rw-r--r--. 1 boinc boinc       410 May 30 19:57 runtime_log
[2026-05-30 20:03:56] -rw-------. 1 boinc boinc   1280000 May 30 19:57 result.tar.gz
[2026-05-30 20:03:56] -rw-r--r--. 1 boinc boinc      8828 May 30 19:57 runtime_log.err
[2026-05-30 20:03:56] -rw-------. 1 boinc boinc       664 May 30 19:57 b3b3726e1907.diag
[2026-05-30 20:03:56] -rw-r--r--. 1 boinc boinc      8192 May 30 20:03 boinc_mmap_file
[2026-05-30 20:03:56] -rw-r--r--. 1 boinc boinc        26 May 30 20:03 wrapper_checkpoint.txt
[2026-05-30 20:03:56] -rw-r--r--. 1 boinc boinc     21034 May 30 20:03 stderr.txt
[2026-05-30 20:03:56] HITS file was successfully produced:
[2026-05-30 20:03:56] -rw-------. 1 boinc boinc 245640706 May 30 19:55 shared/HITS.pool.root.1
[2026-05-30 20:03:56]  *** Contents of shared directory: ***
[2026-05-30 20:03:56] total 545048
[2026-05-30 20:03:56] -rw-r--r--. 2 boinc boinc 310478417 May 30 17:02 ATLAS.root_0
[2026-05-30 20:03:56] -rw-r--r--. 2 boinc boinc     15667 May 30 17:02 start_atlas.sh
[2026-05-30 20:03:56] -rw-r--r--. 2 boinc boinc    697408 May 30 17:02 input.tar.gz
[2026-05-30 20:03:56] -rw-------. 1 boinc boinc 245640706 May 30 19:55 HITS.pool.root.1
[2026-05-30 20:03:56] -rw-------. 1 boinc boinc   1280000 May 30 19:57 result.tar.gz
20:03:57 (820501): run_atlas exited; CPU time 40352.690886
20:03:57 (820501): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN