Name 9f34372a881f_0
Workunit 241690968
Created 30 May 2026, 8:29:54 UTC
Sent 30 May 2026, 12:09:05 UTC
Report deadline 7 Jun 2026, 12:09:05 UTC
Received 30 May 2026, 13:15:36 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 10823079
Run time 3 min 17 sec
CPU time 16 sec
Priority 28
Validate state Invalid
Credit 0.00
Device peak FLOPS 104.12 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 582.17 MB
Peak swap size 1.59 GB
Peak disk usage 578.12 MB

Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
15:12:06 (1015473): wrapper (7.7.26015): starting
15:12:06 (1015473): wrapper: running run_atlas (--nthreads 12)
[2026-05-30 15:12:06] Arguments: --nthreads 12
[2026-05-30 15:12:06] Threads: 12
[2026-05-30 15:12:06] Checking for CVMFS
[2026-05-30 15:12:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-30 15:12:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-30 15:12:06] Running cvmfs_config stat atlas.cern.ch
[2026-05-30 15:12:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-30 15:12:06] 2.13.1.0 2378814 886 48992 159966 1 186 2765344 4194305 17 130560 0 29456518 100.000 29625 569 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch DIRECT 1
[2026-05-30 15:12:06] CVMFS is ok
[2026-05-30 15:12:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-30 15:12:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-30 15:12:06] Small home clusters do not require a local http proxy but it is suggested if
[2026-05-30 15:12:06] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-05-30 15:12:06] Further information can be found at the LHC@home message board.
[2026-05-30 15:12:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-30 15:12:06] Checking for apptainer binary...
[2026-05-30 15:12:06] apptainer is not installed, using version from CVMFS
[2026-05-30 15:12:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-30 15:12:06] apptainer isnt working: ERROR  : Could not write info to setgroups: Permission denied
[2026-05-30 15:12:06] ERROR  : Error while waiting event for user namespace mappings: no event received
[2026-05-30 15:12:06] 
[2026-05-30 15:12:06] Falling back to singularity found in PATH at /usr/bin/singularity
[2026-05-30 15:12:06] WARNING: singularity support will be removed in a future version of native ATLAS
[2026-05-30 15:12:06] Please install apptainer instead following the instructions at https://apptainer.org/docs/admin/main/installation.html
[2026-05-30 15:12:06] Checking singularity works with /usr/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-30 15:12:06] singularity works
[2026-05-30 15:12:06] Set ATHENA_PROC_NUMBER=12
[2026-05-30 15:12:06] Set ATHENA_CORE_NUMBER=12
[2026-05-30 15:12:06] Starting ATLAS job with PandaID=7158443807
[2026-05-30 15:12:06] Running command: /usr/bin/singularity exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-30 15:15:20]  *** The last 200 lines of the pilot log: ***
[2026-05-30 15:15:20] 2026-05-30 13:14:48,062 | WARNING  | wrong length of table data, x=[1780146751.0], y=[587.0] (must be same and length>=4)
[2026-05-30 15:15:20] 2026-05-30 13:14:48,062 | INFO     | could have reported an average CPU frequency of 3379 MHz (4 samples)
[2026-05-30 15:15:20] 2026-05-30 13:14:48,062 | INFO     | ..............................
[2026-05-30 15:15:20] 2026-05-30 13:14:48,062 | INFO     | . Timing measurements:
[2026-05-30 15:15:20] 2026-05-30 13:14:48,062 | INFO     | . get job = 0 s
[2026-05-30 15:15:20] 2026-05-30 13:14:48,062 | INFO     | . initial setup = 3 s
[2026-05-30 15:15:20] 2026-05-30 13:14:48,062 | INFO     | . payload setup = 4 s
[2026-05-30 15:15:20] 2026-05-30 13:14:48,062 | INFO     | . stage-in = 0 s
[2026-05-30 15:15:20] 2026-05-30 13:14:48,062 | INFO     | . payload execution = 20 s
[2026-05-30 15:15:20] 2026-05-30 13:14:48,062 | INFO     | . stage-out = 0 s
[2026-05-30 15:15:20] 2026-05-30 13:14:48,062 | INFO     | . log creation = 0 s
[2026-05-30 15:15:20] 2026-05-30 13:14:48,062 | INFO     | ..............................
[2026-05-30 15:15:20] 2026-05-30 13:14:48,062 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-30 15:15:20] 2026-05-30 13:14:48,063 | INFO     | executing command: tail -n 20 /var/lib/boinc-client/slots/2/PanDA_Pilot-7158443807/pilotlog.txt
[2026-05-30 15:15:20] 2026-05-30 13:14:48,073 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-05-30 15:15:20] - Log from pilotlog.txt -
[2026-05-30 15:15:20] 2026-05-30 13:14:48,061 | INFO     | extracted standard info from prmon json
[2026-05-30 15:15:20] 2026-05-30 13:14:48,061 | INFO     | extracted standard memory fields from prmon json
[2026-05-30 15:15:20] 2026-05-30 13:14:48,061 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-30 15:15:20] 2026-05-30 13:14:48,061 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-30 15:15:20] 2026-05-30 13:14:48,062 | WARNING  | found no stored workdir sizes
[2026-05-30 15:15:20] 2026-05-30 13:14:48,062 | INFO     | will not add max space = 0 B to job metrics
[2026-05-30 15:15:20] 2026-05-30 13:14:48,062 | WARNING  | wrong length of table data, x=[1780146751.0], y=[587.0] (must be same and length>=4)
[2026-05-30 15:15:20] 2026-05-30 13:14:48,062 | INFO     | could have reported an average CPU frequency of 3379 MHz (4 samples)
[2026-05-30 15:15:20] 2026-05-30 13:14:48,062 | INFO     | ..............................
[2026-05-30 15:15:20] 2026-05-30 13:14:48,062 | INFO     | . Timing measurements:
[2026-05-30 15:15:20] 2026-05-30 13:14:48,062 | INFO     | . get job = 0 s
[2026-05-30 15:15:20] 2026-05-30 13:14:48,062 | INFO     | . initial setup = 3 s
[2026-05-30 15:15:20] 2026-05-30 13:14:48,062 | INFO     | . payload setup = 4 s
[2026-05-30 15:15:20] 2026-05-30 13:14:48,062 | INFO     | . stage-in = 0 s
[2026-05-30 15:15:20] 2026-05-30 13:14:48,062 | INFO     | . payload execution = 20 s
[2026-05-30 15:15:20] 2026-05-30 13:14:48,062 | INFO     | . stage-out = 0 s
[2026-05-30 15:15:20] 2026-05-30 13:14:48,062 | INFO     | . log creation = 0 s
[2026-05-30 15:15:20] 2026-05-30 13:14:48,062 | INFO     | ..............................
[2026-05-30 15:15:20] 2026-05-30 13:14:48,062 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-30 15:15:20] 2026-05-30 13:14:48,063 | INFO     | executing command: tail -n 20 /var/lib/boinc-client/slots/2/PanDA_Pilot-7158443807/pilotlog.txt
[2026-05-30 15:15:20] 2026-05-30 13:14:48,073 | WARNING  | 
[2026-05-30 15:15:20] [begin log extracts]
[2026-05-30 15:15:20] - Log from pilotlog.txt -
[2026-05-30 15:15:20] 2026-05-30 13:14:48,061 | INFO     | extracted standard info from prmon json
[2026-05-30 15:15:20] 2026-05-30 13:14:48,061 | INFO     | extracted standard memory fields from prmon json
[2026-05-30 15:15:20] 2026-05-30 13:14:48,061 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-30 15:15:20] 2026-05-30 13:14:48,061 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-30 15:15:20] 2026-05-30 13:14:48,062 | WARNING  | found no stored workdir sizes
[2026-05-30 15:15:20] 2026-05-30 13:14:48,062 | INFO     | will not add max space = 0 B to job metrics
[2026-05-30 15:15:20] 2026-05-30 13:14:48,062 | WARNING  | wrong length of table data, x=[1780146751.0], y=[587.0] (must be same and length>=4)
[2026-05-30 15:15:20] 2026-05-30 13:14:48,062 | INFO     | could have reported an average CPU frequency of 3379 MHz (4 samples)
[2026-05-30 15:15:20] 2026-05-30 13:14:48,062 | INFO     | ..............................
[2026-05-30 15:15:20] 2026-05-30 13:14:48,062 | INFO     | . Timing measurements:
[2026-05-30 15:15:20] 2026-05-30 13:14:48,062 | INFO     | . get job = 0 s
[2026-05-30 15:15:20] 2026-05-30 13:14:48,062 | INFO     | . initial setup = 3 s
[2026-05-30 15:15:20] 2026-05-30 13:14:48,062 | INFO     | . payload setup = 4 s
[2026-05-30 15:15:20] 2026-05-30 13:14:48,062 | INFO     | . stage-in = 0 s
[2026-05-30 15:15:20] 2026-05-30 13:14:48,062 | INFO     | . payload execution = 20 s
[2026-05-30 15:15:20] 2026-05-30 13:14:48,062 | INFO     | . stage-out = 0 s
[2026-05-30 15:15:20] 2026-05-30 13:14:48,062 | INFO     | . log creation = 0 s
[2026-05-30 15:15:20] 2026-05-30 13:14:48,062 | INFO     | ..............................
[2026-05-30 15:15:20] 2026-05-30 13:14:48,062 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-30 15:15:20] 2026-05-30 13:14:48,063 | INFO     | executing command: tail -n 20 /var/lib/boinc-client/slots/2/PanDA_Pilot-7158443807/pilotlog.txt
[2026-05-30 15:15:20] [end log extracts]
[2026-05-30 15:15:20] 2026-05-30 13:14:48,073 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-05-30 15:15:20] 2026-05-30 13:14:48,073 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero retu
[2026-05-30 15:15:20] 2026-05-30 13:14:48,110 | INFO     | PID=1021963 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-30 15:15:20] 2026-05-30 13:14:48,110 | INFO     | .. there are 2 such processes running
[2026-05-30 15:15:20] 2026-05-30 13:14:48,558 | INFO     | 
[2026-05-30 15:15:20] 2026-05-30 13:14:48,558 | INFO     | job summary report
[2026-05-30 15:15:20] 2026-05-30 13:14:48,558 | INFO     | --------------------------------------------------
[2026-05-30 15:15:20] 2026-05-30 13:14:48,558 | INFO     | PanDA job id: 7158443807
[2026-05-30 15:15:20] 2026-05-30 13:14:48,558 | INFO     | task id: 50591392
[2026-05-30 15:15:20] 2026-05-30 13:14:48,558 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-05-30 15:12:45,313 CRITICAL Transform executor raised TransformValidationExceptio
[2026-05-30 15:15:20] 2026-05-30 13:14:48,558 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-30 15:15:20] 2026-05-30 13:14:48,558 | INFO     | pilot state: failed 
[2026-05-30 15:15:20] 2026-05-30 13:14:48,558 | INFO     | transexitcode: 65
[2026-05-30 15:15:20] 2026-05-30 13:14:48,558 | INFO     | exeerrorcode: 65
[2026-05-30 15:15:20] 2026-05-30 13:14:48,558 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: "Py:ComponentAccumulator   ERROR This ComponentAccumulator was never merge
[2026-05-30 15:15:20] 2026-05-30 13:14:48,558 | INFO     | exitcode: 65
[2026-05-30 15:15:20] 2026-05-30 13:14:48,558 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: "Py:ComponentAccumulator   ERROR This ComponentAccumulator was never merged!"
[2026-05-30 15:15:20] 2026-05-30 13:14:48,558 | INFO     | cpuconsumptiontime: 18 s
[2026-05-30 15:15:20] 2026-05-30 13:14:48,558 | INFO     | nevents: 0
[2026-05-30 15:15:20] 2026-05-30 13:14:48,558 | INFO     | neventsw: 0
[2026-05-30 15:15:20] 2026-05-30 13:14:48,558 | INFO     | pid: 1032970
[2026-05-30 15:15:20] 2026-05-30 13:14:48,558 | INFO     | pgrp: 1032970
[2026-05-30 15:15:20] 2026-05-30 13:14:48,558 | INFO     | corecount: 12
[2026-05-30 15:15:20] 2026-05-30 13:14:48,558 | INFO     | event service: False
[2026-05-30 15:15:20] 2026-05-30 13:14:48,558 | INFO     | sizes: {0: 2267596, 10: 2267596, 25: 2293763, 26: 2298065, 28: 2298093, 144: 2298259}
[2026-05-30 15:15:20] 2026-05-30 13:14:48,558 | INFO     | --------------------------------------------------
[2026-05-30 15:15:20] 2026-05-30 13:14:48,558 | INFO     | 
[2026-05-30 15:15:20] 2026-05-30 13:14:48,558 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2026-05-30 15:15:20] 2026-05-30 13:14:48,569 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-30 15:15:20] 2026-05-30 13:14:48,569 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-30 15:15:20] 2026-05-30 13:14:48,569 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-30 15:15:20] 2026-05-30 13:14:48,569 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-30 15:15:20] 2026-05-30 13:14:48,569 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-30 15:15:20] 2026-05-30 13:14:48,570 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-30 15:15:20] 2026-05-30 13:14:48,570 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-30 15:15:20] 2026-05-30 13:14:48,570 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-30 15:15:20] 2026-05-30 13:14:48,570 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-30 15:15:20] 2026-05-30 13:14:48,570 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-30 15:15:20] 2026-05-30 13:14:48,570 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-30 15:15:20] 2026-05-30 13:14:48,570 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-30 15:15:20] 2026-05-30 13:14:48,570 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-30 15:15:20] 2026-05-30 13:14:48,570 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-30 15:15:20] 2026-05-30 13:14:48,570 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-30 15:15:20] 2026-05-30 13:14:48,570 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-30 15:15:20] 2026-05-30 13:14:48,570 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-30 15:15:20] 2026-05-30 13:14:48,570 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-30 15:15:20] 2026-05-30 13:14:48,570 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-30 15:15:20] 2026-05-30 13:14:48,570 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-30 15:15:20] 2026-05-30 13:14:48,570 | INFO     | job 7158443807 has completed (purged errors)
[2026-05-30 15:15:20] 2026-05-30 13:14:48,570 | INFO     | overall cleanup function is called
[2026-05-30 15:15:20] 2026-05-30 13:14:49,576 | INFO     | --- collectZombieJob: --- 10, [1032970]
[2026-05-30 15:15:20] 2026-05-30 13:14:49,576 | INFO     | zombie collector waiting for pid 1032970
[2026-05-30 15:15:20] 2026-05-30 13:14:49,576 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-30 15:15:20] 2026-05-30 13:14:49,576 | INFO     | collected zombie processes
[2026-05-30 15:15:20] 2026-05-30 13:14:49,576 | INFO     | will attempt to kill all subprocesses of pid=1032970
[2026-05-30 15:15:20] 2026-05-30 13:14:49,617 | INFO     | process IDs to be killed: [1032970] (in reverse order)
[2026-05-30 15:15:20] 2026-05-30 13:14:49,642 | WARNING  | found no corresponding commands to process id(s)
[2026-05-30 15:15:20] 2026-05-30 13:14:49,642 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-30 15:15:20] 2026-05-30 13:14:49,643 | INFO     | did not find any defunct processes belonging to 1032970
[2026-05-30 15:15:20] 2026-05-30 13:14:49,645 | INFO     | did not find any defunct processes belonging to 1032970
[2026-05-30 15:15:20] 2026-05-30 13:14:49,645 | INFO     | Ready for new job
[2026-05-30 15:15:20] 2026-05-30 13:14:49,646 | INFO     | ***************************************
[2026-05-30 15:15:20] 2026-05-30 13:14:49,646 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-30 15:15:20] 2026-05-30 13:14:49,646 | INFO     | ***************************************
[2026-05-30 15:15:20] 2026-05-30 13:14:49,646 | INFO     | 
[2026-05-30 15:15:20] 2026-05-30 13:14:49,646 | INFO     | architecture information:
[2026-05-30 15:15:20] 2026-05-30 13:14:49,646 | INFO     | executing command: cat /etc/os-release
[2026-05-30 15:15:20] 2026-05-30 13:14:49,652 | INFO     | cat /etc/os-release:
[2026-05-30 15:15:20] NAME="CentOS Linux"
[2026-05-30 15:15:20] VERSION="7 (Core)"
[2026-05-30 15:15:20] ID="centos"
[2026-05-30 15:15:20] ID_LIKE="rhel fedora"
[2026-05-30 15:15:20] VERSION_ID="7"
[2026-05-30 15:15:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-30 15:15:20] ANSI_COLOR="0;31"
[2026-05-30 15:15:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-30 15:15:20] HOME_URL="https://www.centos.org/"
[2026-05-30 15:15:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-30 15:15:20] 
[2026-05-30 15:15:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-30 15:15:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-30 15:15:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-30 15:15:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-30 15:15:20] 
[2026-05-30 15:15:20] 2026-05-30 13:14:49,652 | INFO     | ***************************************
[2026-05-30 15:15:20] 2026-05-30 13:14:50,155 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2026-05-30 15:15:20] 2026-05-30 13:14:50,162 | INFO     | sufficient remaining disk space (57920192512 B)
[2026-05-30 15:15:20] 2026-05-30 13:14:50,162 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-30 15:15:20] 2026-05-30 13:14:50,162 | INFO     | current server update state: UPDATING_FINAL
[2026-05-30 15:15:20] 2026-05-30 13:14:50,162 | INFO     | update_server=False
[2026-05-30 15:15:20] 2026-05-30 13:14:50,162 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-30 15:15:20] 2026-05-30 13:14:50,227 | INFO     | all job control threads have been joined
[2026-05-30 15:15:20] 2026-05-30 13:14:50,340 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-30 15:15:20] 2026-05-30 13:14:50,384 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-30 15:15:20] 2026-05-30 13:14:50,384 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-30 15:15:20] 2026-05-30 13:14:50,384 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-30 15:15:20] 2026-05-30 13:14:50,384 | INFO     | will abort loop
[2026-05-30 15:15:20] 2026-05-30 13:14:50,506 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-30 15:15:20] 2026-05-30 13:14:51,132 | INFO     | all data control threads have been joined
[2026-05-30 15:15:20] 2026-05-30 13:14:51,167 | INFO     | [job] retrieve thread has finished
[2026-05-30 15:15:20] 2026-05-30 13:14:51,224 | INFO     | [payload] validate_pre thread has finished
[2026-05-30 15:15:20] 2026-05-30 13:14:51,230 | INFO     | [job] control thread has finished
[2026-05-30 15:15:20] 2026-05-30 13:14:51,309 | INFO     | all payload control threads have been joined
[2026-05-30 15:15:20] 2026-05-30 13:14:51,317 | INFO     | [data] copytool_in thread has finished
[2026-05-30 15:15:20] 2026-05-30 13:14:51,327 | INFO     | [payload] validate_post thread has finished
[2026-05-30 15:15:20] 2026-05-30 13:14:51,389 | INFO     | [job] job monitor thread has finished
[2026-05-30 15:15:20] 2026-05-30 13:14:51,764 | INFO     | [payload] execute_payloads thread has finished
[2026-05-30 15:15:20] 2026-05-30 13:14:51,807 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-30 15:15:20] 2026-05-30 13:14:51,915 | INFO     | [payload] failed_post thread has finished
[2026-05-30 15:15:20] 2026-05-30 13:14:52,137 | INFO     | [data] control thread has finished
[2026-05-30 15:15:20] 2026-05-30 13:14:52,314 | INFO     | [payload] control thread has finished
[2026-05-30 15:15:20] 2026-05-30 13:14:52,511 | INFO     | [data] copytool_out thread has finished
[2026-05-30 15:15:20] 2026-05-30 13:14:52,595 | INFO     | [job] validate thread has finished
[2026-05-30 15:15:20] 2026-05-30 13:14:52,669 | INFO     | [job] create_data_payload thread has finished
[2026-05-30 15:15:20] 2026-05-30 13:14:53,115 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-30 15:15:20] 2026-05-30 13:14:54,119 | INFO     | [job] queue monitor thread has finished
[2026-05-30 15:15:20] 2026-05-30 13:14:54,346 | INFO     | [data] queue_monitor thread has finished
[2026-05-30 15:15:20] 2026-05-30 13:15:13,446 | INFO     | [monitor] cgroup control has ended
[2026-05-30 15:15:20] 2026-05-30 13:15:14,769 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124120644679488)>', '<ExcThread(monitor, started 124120293422848)>']
[2026-05-30 15:15:20] 2026-05-30 13:15:19,769 | INFO     | all workflow threads have been joined
[2026-05-30 15:15:20] 2026-05-30 13:15:19,770 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-30 15:15:20] 2026-05-30 13:15:19,770 | INFO     | traces error code: 0
[2026-05-30 15:15:20] 2026-05-30 13:15:19,770 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-30 15:15:20] 2026-05-30 13:15:20,238 | INFO     | PID=1021963 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-30 15:15:20] 2026-05-30 13:15:20,238 | INFO     | .. there are 2 such processes running
[2026-05-30 15:15:20] 2026-05-30 13:15:20,239 | INFO     | found 0 job(s) in 20 queues
[2026-05-30 15:15:20] 2026-05-30 13:15:20,239 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-30 15:15:20] 2026-05-30 13:15:20,239 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-30 15:15:20] 2026-05-30 13:15:20,239 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-30 15:15:20] 2026-05-30 13:15:20,239 | INFO     | [monitor] control thread has ended
[2026-05-30 15:15:20] 2026-05-30 13:15:20,278 [wrapper] ==== pilot stdout END ====
[2026-05-30 15:15:20] 2026-05-30 13:15:20,280 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-30 15:15:20] 2026-05-30 13:15:20,281 [wrapper] pilotpid: 1021963
[2026-05-30 15:15:20] 2026-05-30 13:15:20,283 [wrapper] Pilot exit status: 0
[2026-05-30 15:15:20] 2026-05-30 13:15:20,288 [wrapper] pandaids: 7158443807
[2026-05-30 15:15:20] 2026-05-30 13:15:20,303 [wrapper] cleanup supervisor_pilot 1021969 1021964
[2026-05-30 15:15:20] 2026-05-30 13:15:20,305 [wrapper] Test setup, not cleaning
[2026-05-30 15:15:20] 2026-05-30 13:15:20,306 [wrapper] apfmon messages muted
[2026-05-30 15:15:20] 2026-05-30 13:15:20,307 [wrapper] ==== wrapper stdout END ====
[2026-05-30 15:15:20] 2026-05-30 13:15:20,309 [wrapper] ==== wrapper stderr END ====
[2026-05-30 15:15:20]  *** Error codes and diagnostics ***
[2026-05-30 15:15:20]     "exeErrorCode": 65,
[2026-05-30 15:15:20]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: \"Py:ComponentAccumulator   ERROR This ComponentAccumulator was never merged!\"",
[2026-05-30 15:15:20]     "pilotErrorCode": 1305,
[2026-05-30 15:15:20]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: \"Py:ComponentAccumulator   ERROR This ComponentAccumulator was never merged!\"",
[2026-05-30 15:15:20]  *** Listing of results directory ***
[2026-05-30 15:15:20] total 295732
[2026-05-30 15:15:20] -rw-r--r-- 1 boinc boinc    683926 May 30 10:25 pilot3.tar.gz
[2026-05-30 15:15:20] -rw-r--r-- 1 boinc boinc      5631 May 30 10:25 queuedata.json
[2026-05-30 15:15:20] -rwx------ 1 boinc boinc     36281 May 30 10:26 runpilot2-wrapper.sh
[2026-05-30 15:15:20] -rw-r--r-- 1 boinc boinc       100 May 30 15:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-30 15:15:20] -rwxr-xr-x 1 boinc boinc      7986 May 30 15:12 run_atlas
[2026-05-30 15:15:20] -rw-r--r-- 1 boinc boinc       105 May 30 15:12 job.xml
[2026-05-30 15:15:20] -rw-r--r-- 2 boinc boinc 298473711 May 30 15:12 EVNT.50469892._000018.pool.root.1
[2026-05-30 15:15:20] -rw-r--r-- 2 boinc boinc    697418 May 30 15:12 input.tar.gz
[2026-05-30 15:15:20] drwxrwx--x 2 boinc boinc      4096 May 30 15:12 shared
[2026-05-30 15:15:20] -rw-r--r-- 1 boinc boinc         0 May 30 15:12 boinc_setup_complete
[2026-05-30 15:15:20] -rw-r--r-- 2 boinc boinc     15667 May 30 15:12 start_atlas.sh
[2026-05-30 15:15:20] -rw-r--r-- 1 boinc boinc      9098 May 30 15:12 init_data.xml
[2026-05-30 15:15:20] -rw-r--r-- 1 boinc boinc         0 May 30 15:12 boinc_lockfile
[2026-05-30 15:15:20] -rw-r--r-- 1 boinc boinc      2549 May 30 15:12 pandaJob.out
[2026-05-30 15:15:20] -rw------- 1 boinc boinc    995585 May 30 15:12 agis_schedconf.cvmfs.json
[2026-05-30 15:15:20] -rw------- 1 boinc boinc   1502789 May 30 15:12 agis_ddmendpoints.agis.ALL.json
[2026-05-30 15:15:20] -rw------- 1 boinc boinc       416 May 30 15:12 workernode_map.json
[2026-05-30 15:15:20] drwx------ 5 boinc boinc      4096 May 30 15:12 pilot3
[2026-05-30 15:15:20] -rw-r--r-- 1 boinc boinc       480 May 30 15:12 boinc_task_state.xml
[2026-05-30 15:15:20] -rw------- 1 boinc boinc       961 May 30 15:12 memory_monitor_summary.json
[2026-05-30 15:15:20] -rw------- 1 boinc boinc     36596 May 30 15:12 log.50591392._000431.job.log.tgz.1
[2026-05-30 15:15:20] -rw------- 1 boinc boinc      8445 May 30 15:14 heartbeat_new.json
[2026-05-30 15:15:20] -rw------- 1 boinc boinc      8407 May 30 15:14 heartbeat.json
[2026-05-30 15:15:20] -rw-r--r-- 1 boinc boinc      8192 May 30 15:15 boinc_mmap_file
[2026-05-30 15:15:20] -rw-r--r-- 1 boinc boinc        22 May 30 15:15 wrapper_checkpoint.txt
[2026-05-30 15:15:20] -rw------- 1 boinc boinc        95 May 30 15:15 pilot_heartbeat.json
[2026-05-30 15:15:20] -rw------- 1 boinc boinc       822 May 30 15:15 pilotlog.txt
[2026-05-30 15:15:20] -rw------- 1 boinc boinc     74740 May 30 15:15 log.50591392._000431.job.log.1
[2026-05-30 15:15:20] -rw------- 1 boinc boinc       188 May 30 15:15 output.list
[2026-05-30 15:15:20] -rw-r--r-- 1 boinc boinc       410 May 30 15:15 runtime_log
[2026-05-30 15:15:20] -rw------- 1 boinc boinc    133120 May 30 15:15 result.tar.gz
[2026-05-30 15:15:20] -rw------- 1 boinc boinc       622 May 30 15:15 9f34372a881f.diag
[2026-05-30 15:15:20] -rw-r--r-- 1 boinc boinc      8328 May 30 15:15 runtime_log.err
[2026-05-30 15:15:20] -rw-r--r-- 1 boinc boinc     23108 May 30 15:15 stderr.txt
[2026-05-30 15:15:20] No HITS result produced
[2026-05-30 15:15:20]  *** Contents of shared directory: ***
[2026-05-30 15:15:20] total 292316
[2026-05-30 15:15:20] -rw-r--r-- 2 boinc boinc 298473711 May 30 15:12 ATLAS.root_0
[2026-05-30 15:15:20] -rw-r--r-- 2 boinc boinc    697418 May 30 15:12 input.tar.gz
[2026-05-30 15:15:20] -rw-r--r-- 2 boinc boinc     15667 May 30 15:12 start_atlas.sh
[2026-05-30 15:15:20] -rw------- 1 boinc boinc    133120 May 30 15:15 result.tar.gz
15:15:21 (1015473): run_atlas exited; CPU time 16.879024
15:15:21 (1015473): called boinc_finish(0)

</stderr_txt>
]]>


©2026 CERN