Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:13:34 (21126): wrapper (7.7.26015): starting
22:13:34 (21126): wrapper: running run_atlas (--nthreads 8)
[2026-05-30 22:13:34] Arguments: --nthreads 8
[2026-05-30 22:13:34] Threads: 8
[2026-05-30 22:13:34] Checking for CVMFS
[2026-05-30 22:13:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-30 22:13:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-30 22:13:38] Running cvmfs_config stat atlas.cern.ch
[2026-05-30 22:13:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-30 22:13:40] 2.11.2.0 28827 65004 128496 159974 3 54 13937147 25165824 96 130560 0 26231946 99.875 19549115 6110 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-30 22:13:40] CVMFS is ok
[2026-05-30 22:13:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-30 22:13:40] Checking for apptainer binary...
[2026-05-30 22:13:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-30 22:13:40] Running /usr/bin/apptainer --version
[2026-05-30 22:13:40] apptainer version 1.3.2-1.el7
[2026-05-30 22:13:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-30 22:13:57] cg-vwn243.simple-grid.lan
[2026-05-30 22:13:57] apptainer works
[2026-05-30 22:13:57] Set ATHENA_PROC_NUMBER=8
[2026-05-30 22:13:57] Set ATHENA_CORE_NUMBER=8
[2026-05-30 22:13:58] Starting ATLAS job with PandaID=7158443816
[2026-05-30 22:13:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-31 03:38:11]  *** The last 200 lines of the pilot log: ***
[2026-05-31 03:38:11] 2026-05-31 01:37:34,528 | INFO     | extracted standard memory fields from prmon json
[2026-05-31 03:38:11] 2026-05-31 01:37:34,529 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-31 03:38:11] 2026-05-31 01:37:34,529 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-31 03:38:11] 2026-05-31 01:37:34,535 | INFO     | fitting pss+swap vs Time
[2026-05-31 03:38:11] 2026-05-31 01:37:34,536 | INFO     | sum of square deviations: 8797783560.0
[2026-05-31 03:38:11] 2026-05-31 01:37:34,539 | INFO     | sum of deviations: 211034968772.00003
[2026-05-31 03:38:11] 2026-05-31 01:37:34,539 | INFO     | mean x (centered): 0.0
[2026-05-31 03:38:11] 2026-05-31 01:37:34,539 | INFO     | mean y: 2453541.1344262296
[2026-05-31 03:38:11] 2026-05-31 01:37:34,539 | INFO     | intersect: 2453541.1344262296
[2026-05-31 03:38:11] 2026-05-31 01:37:34,540 | INFO     | chi2: 12.997138346354395
[2026-05-31 03:38:11] 2026-05-31 01:37:34,540 | INFO     | sum of square deviations: 8372156975.0
[2026-05-31 03:38:11] 2026-05-31 01:37:34,547 | INFO     | sum of deviations: 227974140054.5
[2026-05-31 03:38:11] 2026-05-31 01:37:34,547 | INFO     | mean x (centered): 0.0
[2026-05-31 03:38:11] 2026-05-31 01:37:34,547 | INFO     | mean y: 2459512.59
[2026-05-31 03:38:11] 2026-05-31 01:37:34,548 | INFO     | intersect: 2459512.59
[2026-05-31 03:38:11] 2026-05-31 01:37:34,548 | INFO     | chi2: 12.335864632366569
[2026-05-31 03:38:11] 2026-05-31 01:37:34,548 | INFO     | current chi2=12.335864632366569 (change=5.087840849007422 %)
[2026-05-31 03:38:11] 2026-05-31 01:37:34,548 | INFO     | right removable region: 299
[2026-05-31 03:38:11] 2026-05-31 01:37:34,549 | INFO     | sum of square deviations: 8372156975.0
[2026-05-31 03:38:11] 2026-05-31 01:37:34,552 | INFO     | sum of deviations: 97405952503.5
[2026-05-31 03:38:11] 2026-05-31 01:37:34,553 | INFO     | mean x (centered): 0.0
[2026-05-31 03:38:11] 2026-05-31 01:37:34,553 | INFO     | mean y: 2494256.6433333335
[2026-05-31 03:38:11] 2026-05-31 01:37:34,553 | INFO     | intersect: 2494256.6433333335
[2026-05-31 03:38:11] 2026-05-31 01:37:34,553 | INFO     | chi2: 7.036843947302074
[2026-05-31 03:38:11] 2026-05-31 01:37:34,554 | INFO     | current chi2=7.036843947302074 (change=45.858513160507684 %)
[2026-05-31 03:38:11] 2026-05-31 01:37:34,554 | INFO     | sum of square deviations: 7960484140.0
[2026-05-31 03:38:11] 2026-05-31 01:37:34,557 | INFO     | sum of deviations: -2336280723.999996
[2026-05-31 03:38:11] 2026-05-31 01:37:34,557 | INFO     | mean x (centered): 0.0
[2026-05-31 03:38:11] 2026-05-31 01:37:34,557 | INFO     | mean y: 2531183.772881356
[2026-05-31 03:38:11] 2026-05-31 01:37:34,557 | INFO     | intersect: 2531183.772881356
[2026-05-31 03:38:11] 2026-05-31 01:37:34,558 | INFO     | chi2: 2.807968776500987
[2026-05-31 03:38:11] 2026-05-31 01:37:34,558 | INFO     | current chi2=2.807968776500987 (change=60.096190884301734 %)
[2026-05-31 03:38:11] 2026-05-31 01:37:34,559 | INFO     | sum of square deviations: 7562532492.5
[2026-05-31 03:38:11] 2026-05-31 01:37:34,561 | INFO     | sum of deviations: -64876743492.0
[2026-05-31 03:38:11] 2026-05-31 01:37:34,562 | INFO     | mean x (centered): 0.0
[2026-05-31 03:38:11] 2026-05-31 01:37:34,562 | INFO     | mean y: 2555075.4137931033
[2026-05-31 03:38:11] 2026-05-31 01:37:34,562 | INFO     | intersect: 2555075.4137931033
[2026-05-31 03:38:11] 2026-05-31 01:37:34,562 | INFO     | chi2: 1.031911901793065
[2026-05-31 03:38:11] 2026-05-31 01:37:34,562 | INFO     | current chi2=1.031911901793065 (change=63.25059201409884 %)
[2026-05-31 03:38:11] 2026-05-31 01:37:34,563 | INFO     | sum of square deviations: 7178069470.0
[2026-05-31 03:38:11] 2026-05-31 01:37:34,570 | INFO     | sum of deviations: -70856734044.0
[2026-05-31 03:38:11] 2026-05-31 01:37:34,570 | INFO     | mean x (centered): 0.0
[2026-05-31 03:38:11] 2026-05-31 01:37:34,571 | INFO     | mean y: 2557420.796491228
[2026-05-31 03:38:11] 2026-05-31 01:37:34,571 | INFO     | intersect: 2557420.796491228
[2026-05-31 03:38:11] 2026-05-31 01:37:34,571 | INFO     | chi2: 0.9807626649754162
[2026-05-31 03:38:11] 2026-05-31 01:37:34,571 | INFO     | current chi2=0.9807626649754162 (change=4.956744536890317 %)
[2026-05-31 03:38:11] 2026-05-31 01:37:34,572 | INFO     | left removable region: 20
[2026-05-31 03:38:11] 2026-05-31 01:37:34,572 | INFO     | sum of square deviations: 6734191380.0
[2026-05-31 03:38:11] 2026-05-31 01:37:34,575 | INFO     | sum of deviations: -50318530950.00003
[2026-05-31 03:38:11] 2026-05-31 01:37:34,575 | INFO     | mean x (centered): 0.0
[2026-05-31 03:38:11] 2026-05-31 01:37:34,575 | INFO     | mean y: 2565748.0394265233
[2026-05-31 03:38:11] 2026-05-31 01:37:34,576 | INFO     | intersect: 2565748.0394265233
[2026-05-31 03:38:11] 2026-05-31 01:37:34,576 | INFO     | chi2: 0.19374397678765592
[2026-05-31 03:38:11] 2026-05-31 01:37:34,576 | INFO     | current memory leak: -7.47 B/s (using 279 data points, chi2=0.19)
[2026-05-31 03:38:11] 2026-05-31 01:37:34,577 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-05-31 03:38:11] 2026-05-31 01:37:34,577 | INFO     | ..............................
[2026-05-31 03:38:11] 2026-05-31 01:37:34,577 | INFO     | . Timing measurements:
[2026-05-31 03:38:11] 2026-05-31 01:37:34,577 | INFO     | . get job = 0 s
[2026-05-31 03:38:11] 2026-05-31 01:37:34,577 | INFO     | . initial setup = 120 s
[2026-05-31 03:38:11] 2026-05-31 01:37:34,577 | INFO     | . payload setup = 304 s
[2026-05-31 03:38:11] 2026-05-31 01:37:34,578 | INFO     | . stage-in = 0 s
[2026-05-31 03:38:11] 2026-05-31 01:37:34,578 | INFO     | . payload execution = 18719 s
[2026-05-31 03:38:11] 2026-05-31 01:37:34,578 | INFO     | . stage-out = 3 s
[2026-05-31 03:38:11] 2026-05-31 01:37:34,578 | INFO     | . log creation = 1 s
[2026-05-31 03:38:11] 2026-05-31 01:37:34,578 | INFO     | ..............................
[2026-05-31 03:38:11] 2026-05-31 01:37:34,733 | INFO     | 
[2026-05-31 03:38:11] 2026-05-31 01:37:34,733 | INFO     | job summary report
[2026-05-31 03:38:11] 2026-05-31 01:37:34,733 | INFO     | --------------------------------------------------
[2026-05-31 03:38:11] 2026-05-31 01:37:34,733 | INFO     | PanDA job id: 7158443816
[2026-05-31 03:38:11] 2026-05-31 01:37:34,733 | INFO     | task id: 50591392
[2026-05-31 03:38:11] 2026-05-31 01:37:34,734 | INFO     | errors: (none)
[2026-05-31 03:38:11] 2026-05-31 01:37:34,734 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-31 03:38:11] 2026-05-31 01:37:34,734 | INFO     | pilot state: finished 
[2026-05-31 03:38:11] 2026-05-31 01:37:34,734 | INFO     | transexitcode: 0
[2026-05-31 03:38:11] 2026-05-31 01:37:34,734 | INFO     | exeerrorcode: 0
[2026-05-31 03:38:11] 2026-05-31 01:37:34,734 | INFO     | exeerrordiag: 
[2026-05-31 03:38:11] 2026-05-31 01:37:34,734 | INFO     | exitcode: 0
[2026-05-31 03:38:11] 2026-05-31 01:37:34,734 | INFO     | exitmsg: OK
[2026-05-31 03:38:11] 2026-05-31 01:37:34,734 | INFO     | cpuconsumptiontime: 70201 s
[2026-05-31 03:38:11] 2026-05-31 01:37:34,734 | INFO     | nevents: 400
[2026-05-31 03:38:11] 2026-05-31 01:37:34,734 | INFO     | neventsw: 0
[2026-05-31 03:38:11] 2026-05-31 01:37:34,734 | INFO     | pid: 29620
[2026-05-31 03:38:11] 2026-05-31 01:37:34,735 | INFO     | pgrp: 29620
[2026-05-31 03:38:11] 2026-05-31 01:37:34,735 | INFO     | corecount: 8
[2026-05-31 03:38:11] 2026-05-31 01:37:34,735 | INFO     | event service: False
[2026-05-31 03:38:11] 2026-05-31 01:37:34,735 | INFO     | sizes: {0: 2265132, 1: 2244636, 2: 2267646, 19028: 2300291, 19029: 2300290, 19033: 2309344, 19036: 2309722}
[2026-05-31 03:38:11] 2026-05-31 01:37:34,735 | INFO     | --------------------------------------------------
[2026-05-31 03:38:11] 2026-05-31 01:37:34,735 | INFO     | 
[2026-05-31 03:38:11] 2026-05-31 01:37:34,735 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-05-31 03:38:11] 2026-05-31 01:37:35,490 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-31 03:38:11] 2026-05-31 01:37:35,490 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-31 03:38:11] 2026-05-31 01:37:35,490 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-31 03:38:11] 2026-05-31 01:37:35,490 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-31 03:38:11] 2026-05-31 01:37:35,491 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-31 03:38:11] 2026-05-31 01:37:35,491 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-31 03:38:11] 2026-05-31 01:37:35,491 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-31 03:38:11] 2026-05-31 01:37:35,491 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-31 03:38:11] 2026-05-31 01:37:35,491 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-31 03:38:11] 2026-05-31 01:37:35,491 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-31 03:38:11] 2026-05-31 01:37:35,491 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-31 03:38:11] 2026-05-31 01:37:35,491 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-31 03:38:11] 2026-05-31 01:37:35,492 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-31 03:38:11] 2026-05-31 01:37:35,492 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-31 03:38:11] 2026-05-31 01:37:35,492 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-31 03:38:11] 2026-05-31 01:37:35,492 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-31 03:38:11] 2026-05-31 01:37:35,492 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-31 03:38:11] 2026-05-31 01:37:35,492 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-31 03:38:11] 2026-05-31 01:37:35,492 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-31 03:38:11] 2026-05-31 01:37:35,492 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-31 03:38:11] 2026-05-31 01:37:35,493 | INFO     | job 7158443816 has completed (purged errors)
[2026-05-31 03:38:11] 2026-05-31 01:37:35,493 | INFO     | overall cleanup function is called
[2026-05-31 03:38:11] 2026-05-31 01:37:36,502 | INFO     | --- collectZombieJob: --- 10, [29620]
[2026-05-31 03:38:11] 2026-05-31 01:37:36,502 | INFO     | zombie collector waiting for pid 29620
[2026-05-31 03:38:11] 2026-05-31 01:37:36,502 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-31 03:38:11] 2026-05-31 01:37:36,503 | INFO     | collected zombie processes
[2026-05-31 03:38:11] 2026-05-31 01:37:36,503 | INFO     | will attempt to kill all subprocesses of pid=29620
[2026-05-31 03:38:11] 2026-05-31 01:37:36,570 | INFO     | process IDs to be killed: [29620] (in reverse order)
[2026-05-31 03:38:11] 2026-05-31 01:37:37,300 | WARNING  | found no corresponding commands to process id(s)
[2026-05-31 03:38:11] 2026-05-31 01:37:37,300 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-31 03:38:11] 2026-05-31 01:37:37,302 | INFO     | did not find any defunct processes belonging to 29620
[2026-05-31 03:38:11] 2026-05-31 01:37:37,304 | INFO     | did not find any defunct processes belonging to 29620
[2026-05-31 03:38:11] 2026-05-31 01:37:37,304 | INFO     | Ready for new job
[2026-05-31 03:38:11] 2026-05-31 01:37:37,306 | INFO     | ***************************************
[2026-05-31 03:38:11] 2026-05-31 01:37:37,306 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-31 03:38:11] 2026-05-31 01:37:37,306 | INFO     | ***************************************
[2026-05-31 03:38:11] 2026-05-31 01:37:37,307 | INFO     | 
[2026-05-31 03:38:11] 2026-05-31 01:37:37,307 | INFO     | pilot is running in a VM
[2026-05-31 03:38:11] 2026-05-31 01:37:37,307 | INFO     | architecture information:
[2026-05-31 03:38:11] 2026-05-31 01:37:37,310 | INFO     | executing command: cat /etc/os-release
[2026-05-31 03:38:11] 2026-05-31 01:37:37,537 | INFO     | cat /etc/os-release:
[2026-05-31 03:38:11] NAME="CentOS Linux"
[2026-05-31 03:38:11] VERSION="7 (Core)"
[2026-05-31 03:38:11] ID="centos"
[2026-05-31 03:38:11] ID_LIKE="rhel fedora"
[2026-05-31 03:38:11] VERSION_ID="7"
[2026-05-31 03:38:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-31 03:38:11] ANSI_COLOR="0;31"
[2026-05-31 03:38:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-31 03:38:11] HOME_URL="https://www.centos.org/"
[2026-05-31 03:38:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-31 03:38:11] 
[2026-05-31 03:38:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-31 03:38:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-31 03:38:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-31 03:38:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-31 03:38:11] 
[2026-05-31 03:38:11] 2026-05-31 01:37:37,538 | INFO     | ***************************************
[2026-05-31 03:38:11] 2026-05-31 01:37:38,040 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-05-31 03:38:11] 2026-05-31 01:37:38,222 | INFO     | sufficient remaining disk space (496507027456 B)
[2026-05-31 03:38:11] 2026-05-31 01:37:38,223 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-31 03:38:11] 2026-05-31 01:37:38,223 | INFO     | current server update state: UPDATING_FINAL
[2026-05-31 03:38:11] 2026-05-31 01:37:38,223 | INFO     | update_server=False
[2026-05-31 03:38:11] 2026-05-31 01:37:38,223 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-31 03:38:11] 2026-05-31 01:37:38,223 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-31 03:38:11] 2026-05-31 01:37:38,224 | INFO     | aborting loop
[2026-05-31 03:38:11] 2026-05-31 01:37:38,253 | INFO     | all payload control threads have been joined
[2026-05-31 03:38:11] 2026-05-31 01:37:38,643 | INFO     | all data control threads have been joined
[2026-05-31 03:38:11] 2026-05-31 01:37:39,063 | INFO     | all job control threads have been joined
[2026-05-31 03:38:11] 2026-05-31 01:37:39,151 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-31 03:38:11] 2026-05-31 01:37:39,229 | INFO     | [job] retrieve thread has finished
[2026-05-31 03:38:11] 2026-05-31 01:37:39,230 | INFO     | [job] job monitor thread has finished
[2026-05-31 03:38:11] 2026-05-31 01:37:39,259 | INFO     | [payload] control thread has finished
[2026-05-31 03:38:11] 2026-05-31 01:37:39,269 | INFO     | [data] copytool_in thread has finished
[2026-05-31 03:38:11] 2026-05-31 01:37:39,425 | INFO     | [job] create_data_payload thread has finished
[2026-05-31 03:38:11] 2026-05-31 01:37:39,462 | INFO     | [payload] validate_post thread has finished
[2026-05-31 03:38:11] 2026-05-31 01:37:39,613 | INFO     | [payload] execute_payloads thread has finished
[2026-05-31 03:38:11] 2026-05-31 01:37:39,649 | INFO     | [data] control thread has finished
[2026-05-31 03:38:11] 2026-05-31 01:37:39,694 | INFO     | [payload] failed_post thread has finished
[2026-05-31 03:38:11] 2026-05-31 01:37:39,746 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-31 03:38:11] 2026-05-31 01:37:40,069 | INFO     | [job] control thread has finished
[2026-05-31 03:38:11] 2026-05-31 01:37:40,162 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-31 03:38:11] 2026-05-31 01:37:40,369 | INFO     | [job] validate thread has finished
[2026-05-31 03:38:11] 2026-05-31 01:37:40,387 | INFO     | [payload] validate_pre thread has finished
[2026-05-31 03:38:11] 2026-05-31 01:37:40,644 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-31 03:38:11] 2026-05-31 01:37:40,752 | INFO     | [job] queue monitor thread has finished
[2026-05-31 03:38:11] 2026-05-31 01:37:41,158 | INFO     | [data] copytool_out thread has finished
[2026-05-31 03:38:11] 2026-05-31 01:37:44,171 | INFO     | [data] queue_monitor thread has finished
[2026-05-31 03:38:11] 2026-05-31 01:37:47,660 | INFO     | [monitor] cgroup control has ended
[2026-05-31 03:38:11] 2026-05-31 01:37:49,094 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140660247435072)>', '<ExcThread(monitor, started 140659298133760)>']
[2026-05-31 03:38:11] 2026-05-31 01:37:54,120 | INFO     | all workflow threads have been joined
[2026-05-31 03:38:11] 2026-05-31 01:37:54,120 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-31 03:38:11] 2026-05-31 01:37:54,121 | INFO     | traces error code: 0
[2026-05-31 03:38:11] 2026-05-31 01:37:54,121 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-31 03:38:11] 2026-05-31 01:38:07,901 | INFO     | PID=25125 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-31 03:38:11] 2026-05-31 01:38:07,901 | INFO     | .. there are 2 such processes running
[2026-05-31 03:38:11] 2026-05-31 01:38:07,902 | INFO     | found 0 job(s) in 20 queues
[2026-05-31 03:38:11] 2026-05-31 01:38:07,902 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-31 03:38:11] 2026-05-31 01:38:07,903 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-31 03:38:11] 2026-05-31 01:38:07,903 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-31 03:38:11] 2026-05-31 01:38:07,903 | INFO     | [monitor] control thread has ended
[2026-05-31 03:38:11] 2026-05-31 01:38:08,045 [wrapper] ==== pilot stdout END ====
[2026-05-31 03:38:11] 2026-05-31 01:38:08,054 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-31 03:38:11] 2026-05-31 01:38:08,065 [wrapper] pilotpid: 25125
[2026-05-31 03:38:11] 2026-05-31 01:38:08,077 [wrapper] Pilot exit status: 0
[2026-05-31 03:38:11] 2026-05-31 01:38:08,106 [wrapper] pandaids: 7158443816
[2026-05-31 03:38:11] 2026-05-31 01:38:08,186 [wrapper] cleanup supervisor_pilot  5021 25126
[2026-05-31 03:38:11] 2026-05-31 01:38:08,276 [wrapper] Test setup, not cleaning
[2026-05-31 03:38:11] 2026-05-31 01:38:08,374 [wrapper] apfmon messages muted
[2026-05-31 03:38:11] 2026-05-31 01:38:08,459 [wrapper] ==== wrapper stdout END ====
[2026-05-31 03:38:11] 2026-05-31 01:38:08,560 [wrapper] ==== wrapper stderr END ====
[2026-05-31 03:38:11]  *** Error codes and diagnostics ***
[2026-05-31 03:38:11]     "exeErrorCode": 0,
[2026-05-31 03:38:11]     "pilotErrorCode": 0,
[2026-05-31 03:38:11]  *** Listing of results directory ***
[2026-05-31 03:38:11] total 519648
[2026-05-31 03:38:11] -rw-r--r--. 1 boinc boinc      5631 May 30 10:25 queuedata.json
[2026-05-31 03:38:11] -rw-r--r--. 1 boinc boinc    683926 May 30 10:25 pilot3.tar.gz
[2026-05-31 03:38:11] -rwx------. 1 boinc boinc     36281 May 30 10:26 runpilot2-wrapper.sh
[2026-05-31 03:38:11] -rw-r--r--. 1 boinc boinc       100 May 30 22:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-31 03:38:11] -rwxr-xr-x. 1 boinc boinc      7986 May 30 22:13 run_atlas
[2026-05-31 03:38:11] -rw-r--r--. 1 boinc boinc       105 May 30 22:13 job.xml
[2026-05-31 03:38:11] -rw-r--r--. 1 boinc boinc      6306 May 30 22:13 init_data.xml
[2026-05-31 03:38:11] -rw-r--r--. 2 boinc boinc 298473711 May 30 22:13 EVNT.50469892._000018.pool.root.1
[2026-05-31 03:38:11] -rw-r--r--. 2 boinc boinc     15667 May 30 22:13 start_atlas.sh
[2026-05-31 03:38:11] drwxrwx--x. 2 boinc boinc        68 May 30 22:13 shared
[2026-05-31 03:38:11] -rw-r--r--. 2 boinc boinc    697418 May 30 22:13 input.tar.gz
[2026-05-31 03:38:11] -rw-r--r--. 1 boinc boinc         0 May 30 22:13 boinc_lockfile
[2026-05-31 03:38:11] -rw-r--r--. 1 boinc boinc      2550 May 30 22:13 pandaJob.out
[2026-05-31 03:38:11] -rw-------. 1 boinc boinc       415 May 30 22:20 workernode_map.json
[2026-05-31 03:38:11] -rw-------. 1 boinc boinc    995580 May 30 22:20 agis_schedconf.cvmfs.json
[2026-05-31 03:38:11] drwx------. 5 boinc boinc      4096 May 30 22:20 pilot3
[2026-05-31 03:38:11] -rw-------. 1 boinc boinc 225159875 May 31 03:35 HITS.50591392._000440.pool.root.1
[2026-05-31 03:38:11] -rw-r--r--. 1 boinc boinc       489 May 31 03:36 boinc_task_state.xml
[2026-05-31 03:38:11] -rw-------. 1 boinc boinc      1014 May 31 03:37 memory_monitor_summary.json
[2026-05-31 03:38:11] -rw-------. 1 boinc boinc   1502789 May 31 03:37 agis_ddmendpoints.agis.ALL.json
[2026-05-31 03:38:11] -rw-------. 1 boinc boinc    438199 May 31 03:37 log.50591392._000440.job.log.tgz.1
[2026-05-31 03:38:11] -rw-------. 1 boinc boinc      6336 May 31 03:37 heartbeat_new.json
[2026-05-31 03:38:11] -rw-------. 1 boinc boinc      6227 May 31 03:37 heartbeat.json
[2026-05-31 03:38:11] -rw-r--r--. 1 boinc boinc        28 May 31 03:38 wrapper_checkpoint.txt
[2026-05-31 03:38:11] -rw-r--r--. 1 boinc boinc      8192 May 31 03:38 boinc_mmap_file
[2026-05-31 03:38:11] -rw-------. 1 boinc boinc        95 May 31 03:38 pilot_heartbeat.json
[2026-05-31 03:38:11] -rw-------. 1 boinc boinc       820 May 31 03:38 pilotlog.txt
[2026-05-31 03:38:11] -rw-------. 1 boinc boinc   1752373 May 31 03:38 log.50591392._000440.job.log.1
[2026-05-31 03:38:11] -rw-------. 1 boinc boinc       357 May 31 03:38 output.list
[2026-05-31 03:38:11] -rw-r--r--. 1 boinc boinc       410 May 31 03:38 runtime_log
[2026-05-31 03:38:11] -rw-------. 1 boinc boinc   2211840 May 31 03:38 result.tar.gz
[2026-05-31 03:38:11] -rw-r--r--. 1 boinc boinc      8439 May 31 03:38 runtime_log.err
[2026-05-31 03:38:11] -rw-------. 1 boinc boinc       656 May 31 03:38 9f18906afb4c.diag
[2026-05-31 03:38:11] -rw-r--r--. 1 boinc boinc     20444 May 31 03:38 stderr.txt
[2026-05-31 03:38:11] HITS file was successfully produced:
[2026-05-31 03:38:11] -rw-------. 1 boinc boinc 225159875 May 31 03:35 shared/HITS.pool.root.1
[2026-05-31 03:38:11]  *** Contents of shared directory: ***
[2026-05-31 03:38:11] total 514224
[2026-05-31 03:38:11] -rw-r--r--. 2 boinc boinc 298473711 May 30 22:13 ATLAS.root_0
[2026-05-31 03:38:11] -rw-r--r--. 2 boinc boinc     15667 May 30 22:13 start_atlas.sh
[2026-05-31 03:38:11] -rw-r--r--. 2 boinc boinc    697418 May 30 22:13 input.tar.gz
[2026-05-31 03:38:11] -rw-------. 1 boinc boinc 225159875 May 31 03:35 HITS.pool.root.1
[2026-05-31 03:38:11] -rw-------. 1 boinc boinc   2211840 May 31 03:38 result.tar.gz
03:38:13 (21126): run_atlas exited; CPU time 70391.249867
03:38:13 (21126): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN