Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:19:02 (403991): wrapper (7.7.26015): starting
14:19:02 (403991): wrapper: running run_atlas (--nthreads 4)
[2026-05-30 14:19:02] Arguments: --nthreads 4
[2026-05-30 14:19:02] Threads: 4
[2026-05-30 14:19:02] Checking for CVMFS
[2026-05-30 14:19:02] No cvmfs_config command found, will try listing directly
[2026-05-30 14:19:02] CVMFS is ok
[2026-05-30 14:19:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-30 14:19:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-30 14:19:02] Further information can be found at the LHC@home message board.
[2026-05-30 14:19:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-30 14:19:02] Checking for apptainer binary...
[2026-05-30 14:19:02] which: no apptainer in ((null))
[2026-05-30 14:19:02] apptainer is not installed, using version from CVMFS
[2026-05-30 14:19:02] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-30 14:19:02] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot100/slots/3/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2026-05-30 14:19:02] apptainer works
[2026-05-30 14:19:02] Set ATHENA_PROC_NUMBER=4
[2026-05-30 14:19:02] Set ATHENA_CORE_NUMBER=4
[2026-05-30 14:19:02] Starting ATLAS job with PandaID=7158373971
[2026-05-30 14:19:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot100/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-30 16:52:49]  *** The last 200 lines of the pilot log: ***
[2026-05-30 16:52:49] 2026-05-30 14:51:50,288 | INFO     | using path: /var/lib/boinc/var/slot100/slots/3/PanDA_Pilot-7158373971/memory_monitor_summary.json (trf name=prmon)
[2026-05-30 16:52:49] 2026-05-30 14:51:50,288 | INFO     | extracted standard info from prmon json
[2026-05-30 16:52:49] 2026-05-30 14:51:50,288 | INFO     | extracted standard memory fields from prmon json
[2026-05-30 16:52:49] 2026-05-30 14:51:50,289 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-30 16:52:49] 2026-05-30 14:51:50,289 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-30 16:52:49] 2026-05-30 14:51:50,292 | INFO     | fitting pss+swap vs Time
[2026-05-30 16:52:49] 2026-05-30 14:51:50,292 | INFO     | sum of square deviations: 1046484737.5
[2026-05-30 16:52:49] 2026-05-30 14:51:50,293 | INFO     | sum of deviations: -33096371060.0
[2026-05-30 16:52:49] 2026-05-30 14:51:50,293 | INFO     | mean x (centered): 0.0
[2026-05-30 16:52:49] 2026-05-30 14:51:50,293 | INFO     | mean y: 2423622.6533333333
[2026-05-30 16:52:49] 2026-05-30 14:51:50,293 | INFO     | intersect: 2423622.6533333333
[2026-05-30 16:52:49] 2026-05-30 14:51:50,294 | INFO     | chi2: 2.2404956908652522
[2026-05-30 16:52:49] 2026-05-30 14:51:50,294 | INFO     | sum of square deviations: 945282840.0
[2026-05-30 16:52:49] 2026-05-30 14:51:50,295 | INFO     | sum of deviations: -21966304959.999996
[2026-05-30 16:52:49] 2026-05-30 14:51:50,295 | INFO     | mean x (centered): 0.0
[2026-05-30 16:52:49] 2026-05-30 14:51:50,295 | INFO     | mean y: 2440005.924137931
[2026-05-30 16:52:49] 2026-05-30 14:51:50,295 | INFO     | intersect: 2440005.924137931
[2026-05-30 16:52:49] 2026-05-30 14:51:50,295 | INFO     | chi2: 1.437022749531497
[2026-05-30 16:52:49] 2026-05-30 14:51:50,296 | INFO     | current chi2=1.437022749531497 (change=35.861391950433244 %)
[2026-05-30 16:52:49] 2026-05-30 14:51:50,296 | INFO     | sum of square deviations: 850825255.0
[2026-05-30 16:52:49] 2026-05-30 14:51:50,297 | INFO     | sum of deviations: -20589452213.500004
[2026-05-30 16:52:49] 2026-05-30 14:51:50,297 | INFO     | mean x (centered): 0.0
[2026-05-30 16:52:49] 2026-05-30 14:51:50,297 | INFO     | mean y: 2442229.65
[2026-05-30 16:52:49] 2026-05-30 14:51:50,297 | INFO     | intersect: 2442229.65
[2026-05-30 16:52:49] 2026-05-30 14:51:50,297 | INFO     | chi2: 1.4327561399335973
[2026-05-30 16:52:49] 2026-05-30 14:51:50,297 | INFO     | current chi2=1.4327561399335973 (change=0.296906197155933 %)
[2026-05-30 16:52:49] 2026-05-30 14:51:50,297 | INFO     | right removable region: 139
[2026-05-30 16:52:49] 2026-05-30 14:51:50,298 | INFO     | sum of square deviations: 945282840.0
[2026-05-30 16:52:49] 2026-05-30 14:51:50,298 | INFO     | sum of deviations: -49180162736.00001
[2026-05-30 16:52:49] 2026-05-30 14:51:50,299 | INFO     | mean x (centered): 0.0
[2026-05-30 16:52:49] 2026-05-30 14:51:50,299 | INFO     | mean y: 2447307.951724138
[2026-05-30 16:52:49] 2026-05-30 14:51:50,299 | INFO     | intersect: 2447307.951724138
[2026-05-30 16:52:49] 2026-05-30 14:51:50,299 | INFO     | chi2: 0.9914171125776267
[2026-05-30 16:52:49] 2026-05-30 14:51:50,299 | INFO     | current chi2=0.9914171125776267 (change=55.75009955967586 %)
[2026-05-30 16:52:49] 2026-05-30 14:51:50,299 | INFO     | sum of square deviations: 850825255.0
[2026-05-30 16:52:49] 2026-05-30 14:51:50,300 | INFO     | sum of deviations: -44150194419.0
[2026-05-30 16:52:49] 2026-05-30 14:51:50,300 | INFO     | mean x (centered): 0.0
[2026-05-30 16:52:49] 2026-05-30 14:51:50,300 | INFO     | mean y: 2439175.0857142857
[2026-05-30 16:52:49] 2026-05-30 14:51:50,300 | INFO     | intersect: 2439175.0857142857
[2026-05-30 16:52:49] 2026-05-30 14:51:50,301 | INFO     | chi2: 0.9908609260632704
[2026-05-30 16:52:49] 2026-05-30 14:51:50,301 | INFO     | current chi2=0.9908609260632704 (change=0.05610015273089662 %)
[2026-05-30 16:52:49] 2026-05-30 14:51:50,301 | INFO     | left removable region: 10
[2026-05-30 16:52:49] 2026-05-30 14:51:50,301 | INFO     | sum of square deviations: 665612480.0
[2026-05-30 16:52:49] 2026-05-30 14:51:50,302 | INFO     | sum of deviations: -31446403715.000008
[2026-05-30 16:52:49] 2026-05-30 14:51:50,302 | INFO     | mean x (centered): 0.0
[2026-05-30 16:52:49] 2026-05-30 14:51:50,302 | INFO     | mean y: 2461049.6356589147
[2026-05-30 16:52:49] 2026-05-30 14:51:50,302 | INFO     | intersect: 2461049.6356589147
[2026-05-30 16:52:49] 2026-05-30 14:51:50,302 | INFO     | chi2: 0.14283165904937223
[2026-05-30 16:52:49] 2026-05-30 14:51:50,302 | INFO     | current memory leak: -47.24 B/s (using 129 data points, chi2=0.14)
[2026-05-30 16:52:49] 2026-05-30 14:51:50,303 | INFO     | could have reported an average CPU frequency of 2778 MHz (9 samples)
[2026-05-30 16:52:49] 2026-05-30 14:51:50,303 | INFO     | ..............................
[2026-05-30 16:52:49] 2026-05-30 14:51:50,303 | INFO     | . Timing measurements:
[2026-05-30 16:52:49] 2026-05-30 14:51:50,303 | INFO     | . get job = 0 s
[2026-05-30 16:52:49] 2026-05-30 14:51:50,303 | INFO     | . initial setup = 8 s
[2026-05-30 16:52:49] 2026-05-30 14:51:50,303 | INFO     | . payload setup = 14 s
[2026-05-30 16:52:49] 2026-05-30 14:51:50,304 | INFO     | . stage-in = 0 s
[2026-05-30 16:52:49] 2026-05-30 14:51:50,304 | INFO     | . payload execution = 9111 s
[2026-05-30 16:52:49] 2026-05-30 14:51:50,304 | INFO     | . stage-out = 0 s
[2026-05-30 16:52:49] 2026-05-30 14:51:50,304 | INFO     | . log creation = 0 s
[2026-05-30 16:52:49] 2026-05-30 14:51:50,304 | INFO     | ..............................
[2026-05-30 16:52:49] 2026-05-30 14:51:50,391 | INFO     | 
[2026-05-30 16:52:49] 2026-05-30 14:51:50,392 | INFO     | job summary report
[2026-05-30 16:52:49] 2026-05-30 14:51:50,392 | INFO     | --------------------------------------------------
[2026-05-30 16:52:49] 2026-05-30 14:51:50,392 | INFO     | PanDA job id: 7158373971
[2026-05-30 16:52:49] 2026-05-30 14:51:50,392 | INFO     | task id: 50533940
[2026-05-30 16:52:49] 2026-05-30 14:51:50,392 | INFO     | errors: (none)
[2026-05-30 16:52:49] 2026-05-30 14:51:50,392 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-30 16:52:49] 2026-05-30 14:51:50,392 | INFO     | pilot state: finished 
[2026-05-30 16:52:49] 2026-05-30 14:51:50,392 | INFO     | transexitcode: 0
[2026-05-30 16:52:49] 2026-05-30 14:51:50,392 | INFO     | exeerrorcode: 0
[2026-05-30 16:52:49] 2026-05-30 14:51:50,392 | INFO     | exeerrordiag: 
[2026-05-30 16:52:49] 2026-05-30 14:51:50,392 | INFO     | exitcode: 0
[2026-05-30 16:52:49] 2026-05-30 14:51:50,392 | INFO     | exitmsg: OK
[2026-05-30 16:52:49] 2026-05-30 14:51:50,393 | INFO     | cpuconsumptiontime: 34862 s
[2026-05-30 16:52:49] 2026-05-30 14:51:50,393 | INFO     | nevents: 400
[2026-05-30 16:52:49] 2026-05-30 14:51:50,393 | INFO     | neventsw: 0
[2026-05-30 16:52:49] 2026-05-30 14:51:50,393 | INFO     | pid: 413696
[2026-05-30 16:52:49] 2026-05-30 14:51:50,393 | INFO     | pgrp: 413696
[2026-05-30 16:52:49] 2026-05-30 14:51:50,393 | INFO     | corecount: 4
[2026-05-30 16:52:49] 2026-05-30 14:51:50,393 | INFO     | event service: False
[2026-05-30 16:52:49] 2026-05-30 14:51:50,393 | INFO     | sizes: {0: 2267569, 11: 2267569, 9129: 2295963, 9130: 2295962, 9132: 2305040, 9133: 2305482}
[2026-05-30 16:52:49] 2026-05-30 14:51:50,393 | INFO     | --------------------------------------------------
[2026-05-30 16:52:49] 2026-05-30 14:51:50,393 | INFO     | 
[2026-05-30 16:52:49] 2026-05-30 14:51:50,393 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot100/slots/3
[2026-05-30 16:52:49] 2026-05-30 14:51:50,425 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-30 16:52:49] 2026-05-30 14:51:50,425 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-30 16:52:49] 2026-05-30 14:51:50,425 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-30 16:52:49] 2026-05-30 14:51:50,425 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-30 16:52:49] 2026-05-30 14:51:50,425 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-30 16:52:49] 2026-05-30 14:51:50,426 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-30 16:52:49] 2026-05-30 14:51:50,426 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-30 16:52:49] 2026-05-30 14:51:50,426 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-30 16:52:49] 2026-05-30 14:51:50,426 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-30 16:52:49] 2026-05-30 14:51:50,426 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-30 16:52:49] 2026-05-30 14:51:50,426 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-30 16:52:49] 2026-05-30 14:51:50,426 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-30 16:52:49] 2026-05-30 14:51:50,426 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-30 16:52:49] 2026-05-30 14:51:50,426 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-30 16:52:49] 2026-05-30 14:51:50,427 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-30 16:52:49] 2026-05-30 14:51:50,427 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-30 16:52:49] 2026-05-30 14:51:50,427 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-30 16:52:49] 2026-05-30 14:51:50,427 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-30 16:52:49] 2026-05-30 14:51:50,427 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-30 16:52:49] 2026-05-30 14:51:50,427 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-30 16:52:49] 2026-05-30 14:51:50,427 | INFO     | job 7158373971 has completed (purged errors)
[2026-05-30 16:52:49] 2026-05-30 14:51:50,427 | INFO     | overall cleanup function is called
[2026-05-30 16:52:49] 2026-05-30 14:51:51,437 | INFO     | --- collectZombieJob: --- 10, [413696]
[2026-05-30 16:52:49] 2026-05-30 14:51:51,437 | INFO     | zombie collector waiting for pid 413696
[2026-05-30 16:52:49] 2026-05-30 14:51:51,437 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-30 16:52:49] 2026-05-30 14:51:51,438 | INFO     | collected zombie processes
[2026-05-30 16:52:49] 2026-05-30 14:51:51,438 | INFO     | will attempt to kill all subprocesses of pid=413696
[2026-05-30 16:52:49] 2026-05-30 14:51:51,769 | WARNING  | process 413696 can no longer be monitored (due to stat problems) - aborting
[2026-05-30 16:52:49] 2026-05-30 14:51:53,638 | INFO     | process IDs to be killed: [413696] (in reverse order)
[2026-05-30 16:52:49] 2026-05-30 14:51:53,641 | INFO     | using path: /var/lib/boinc/var/slot100/slots/3/memory_monitor_summary.json (trf name=prmon)
[2026-05-30 16:52:49] 2026-05-30 14:51:53,939 | WARNING  | found no corresponding commands to process id(s)
[2026-05-30 16:52:49] 2026-05-30 14:51:53,940 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-30 16:52:49] 2026-05-30 14:51:54,008 | INFO     | did not find any defunct processes belonging to 413696
[2026-05-30 16:52:49] 2026-05-30 14:51:54,082 | INFO     | did not find any defunct processes belonging to 413696
[2026-05-30 16:52:49] 2026-05-30 14:51:54,083 | INFO     | Ready for new job
[2026-05-30 16:52:49] 2026-05-30 14:51:54,085 | INFO     | ***************************************
[2026-05-30 16:52:49] 2026-05-30 14:51:54,085 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-30 16:52:49] 2026-05-30 14:51:54,085 | INFO     | ***************************************
[2026-05-30 16:52:49] 2026-05-30 14:51:54,085 | INFO     | 
[2026-05-30 16:52:49] 2026-05-30 14:51:54,097 | INFO     | architecture information:
[2026-05-30 16:52:49] 2026-05-30 14:51:54,097 | INFO     | executing command: cat /etc/os-release
[2026-05-30 16:52:49] 2026-05-30 14:51:54,119 | INFO     | cat /etc/os-release:
[2026-05-30 16:52:49] NAME="CentOS Linux"
[2026-05-30 16:52:49] VERSION="7 (Core)"
[2026-05-30 16:52:49] ID="centos"
[2026-05-30 16:52:49] ID_LIKE="rhel fedora"
[2026-05-30 16:52:49] VERSION_ID="7"
[2026-05-30 16:52:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-30 16:52:49] ANSI_COLOR="0;31"
[2026-05-30 16:52:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-30 16:52:49] HOME_URL="https://www.centos.org/"
[2026-05-30 16:52:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-30 16:52:49] 
[2026-05-30 16:52:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-30 16:52:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-30 16:52:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-30 16:52:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-30 16:52:49] 
[2026-05-30 16:52:49] 2026-05-30 14:51:54,119 | INFO     | ***************************************
[2026-05-30 16:52:49] 2026-05-30 14:51:54,349 | INFO     | number of running child processes to parent process 413696: 1
[2026-05-30 16:52:49] 2026-05-30 14:51:54,350 | INFO     | maximum number of monitored processes: 6
[2026-05-30 16:52:49] 2026-05-30 14:51:54,350 | INFO     | aborting job monitoring since job object (job id=7158373971) has expired
[2026-05-30 16:52:49] 2026-05-30 14:51:54,622 | INFO     | executing command: df -mP /var/lib/boinc/var/slot100/slots/3
[2026-05-30 16:52:49] 2026-05-30 14:51:54,651 | INFO     | sufficient remaining disk space (323903029248 B)
[2026-05-30 16:52:49] 2026-05-30 14:51:54,652 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-30 16:52:49] 2026-05-30 14:51:54,652 | INFO     | current server update state: UPDATING_FINAL
[2026-05-30 16:52:49] 2026-05-30 14:51:54,653 | INFO     | update_server=False
[2026-05-30 16:52:49] 2026-05-30 14:51:54,653 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-30 16:52:49] 2026-05-30 14:51:54,653 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-30 16:52:49] 2026-05-30 14:51:54,653 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-30 16:52:49] 2026-05-30 14:51:54,654 | INFO     | will abort loop
[2026-05-30 16:52:49] 2026-05-30 14:51:54,810 | INFO     | all job control threads have been joined
[2026-05-30 16:52:49] 2026-05-30 14:51:55,301 | INFO     | all data control threads have been joined
[2026-05-30 16:52:49] 2026-05-30 14:51:55,401 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-30 16:52:49] 2026-05-30 14:51:55,411 | INFO     | all payload control threads have been joined
[2026-05-30 16:52:49] 2026-05-30 14:51:55,658 | INFO     | [job] retrieve thread has finished
[2026-05-30 16:52:49] 2026-05-30 14:51:55,659 | INFO     | [job] job monitor thread has finished
[2026-05-30 16:52:49] 2026-05-30 14:51:55,664 | INFO     | [payload] validate_pre thread has finished
[2026-05-30 16:52:49] 2026-05-30 14:51:55,664 | INFO     | [job] create_data_payload thread has finished
[2026-05-30 16:52:49] 2026-05-30 14:51:55,671 | INFO     | [payload] validate_post thread has finished
[2026-05-30 16:52:49] 2026-05-30 14:51:55,816 | INFO     | [job] control thread has finished
[2026-05-30 16:52:49] 2026-05-30 14:51:56,170 | INFO     | [data] copytool_in thread has finished
[2026-05-30 16:52:49] 2026-05-30 14:51:56,265 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-30 16:52:49] 2026-05-30 14:51:56,307 | INFO     | [data] control thread has finished
[2026-05-30 16:52:49] 2026-05-30 14:51:56,344 | INFO     | [payload] execute_payloads thread has finished
[2026-05-30 16:52:49] 2026-05-30 14:51:56,404 | INFO     | [job] queue monitor thread has finished
[2026-05-30 16:52:49] 2026-05-30 14:51:56,415 | INFO     | [payload] control thread has finished
[2026-05-30 16:52:49] 2026-05-30 14:51:56,657 | INFO     | [data] copytool_out thread has finished
[2026-05-30 16:52:49] 2026-05-30 14:51:56,664 | INFO     | [payload] failed_post thread has finished
[2026-05-30 16:52:49] 2026-05-30 14:51:56,683 | INFO     | [job] validate thread has finished
[2026-05-30 16:52:49] 2026-05-30 14:52:00,270 | INFO     | [data] queue_monitor thread has finished
[2026-05-30 16:52:49] 2026-05-30 14:52:05,172 | INFO     | job.realtimelogging is not enabled
[2026-05-30 16:52:49] 2026-05-30 14:52:06,180 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-30 16:52:49] 2026-05-30 14:52:23,268 | INFO     | PID=408428 has CPU usage=16.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-30 16:52:49] 2026-05-30 14:52:23,268 | INFO     | .. there are 15 such processes running
[2026-05-30 16:52:49] 2026-05-30 14:52:23,270 | INFO     | found 0 job(s) in 20 queues
[2026-05-30 16:52:49] 2026-05-30 14:52:23,270 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-30 16:52:49] 2026-05-30 14:52:23,270 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-30 16:52:49] 2026-05-30 14:52:38,967 | INFO     | [monitor] cgroup control has ended
[2026-05-30 16:52:49] 2026-05-30 14:52:40,929 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23049879508800)>', '<ExcThread(monitor, started 23049643767552)>']
[2026-05-30 16:52:49] 2026-05-30 14:52:41,356 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-30 16:52:49] 2026-05-30 14:52:41,357 | INFO     | [monitor] control thread has ended
[2026-05-30 16:52:49] 2026-05-30 14:52:45,954 | INFO     | all workflow threads have been joined
[2026-05-30 16:52:49] 2026-05-30 14:52:45,955 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-30 16:52:49] 2026-05-30 14:52:45,955 | INFO     | traces error code: 0
[2026-05-30 16:52:49] 2026-05-30 14:52:45,955 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-30 16:52:49] 2026-05-30 14:52:46,094 [wrapper] ==== pilot stdout END ====
[2026-05-30 16:52:49] 2026-05-30 14:52:46,097 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-30 16:52:49] 2026-05-30 14:52:46,100 [wrapper] pilotpid: 408428
[2026-05-30 16:52:49] 2026-05-30 14:52:46,103 [wrapper] Pilot exit status: 0
[2026-05-30 16:52:49] 2026-05-30 14:52:46,117 [wrapper] pandaids: 7158373971
[2026-05-30 16:52:49] 2026-05-30 14:52:46,335 [wrapper] cleanup supervisor_pilot  743870 408429
[2026-05-30 16:52:49] 2026-05-30 14:52:46,340 [wrapper] Test setup, not cleaning
[2026-05-30 16:52:49] 2026-05-30 14:52:46,345 [wrapper] apfmon messages muted
[2026-05-30 16:52:49] 2026-05-30 14:52:46,349 [wrapper] ==== wrapper stdout END ====
[2026-05-30 16:52:49] 2026-05-30 14:52:46,352 [wrapper] ==== wrapper stderr END ====
[2026-05-30 16:52:49]  *** Error codes and diagnostics ***
[2026-05-30 16:52:49]     "exeErrorCode": 0,
[2026-05-30 16:52:49]     "pilotErrorCode": 0,
[2026-05-30 16:52:49]  *** Listing of results directory ***
[2026-05-30 16:52:49] total 550460
[2026-05-30 16:52:49] -rw-r--r--. 1 boinc boinc      5631 May 30 10:25 queuedata.json
[2026-05-30 16:52:49] -rw-r--r--. 1 boinc boinc    683926 May 30 10:25 pilot3.tar.gz
[2026-05-30 16:52:49] -rwx------. 1 boinc boinc     36281 May 30 10:25 runpilot2-wrapper.sh
[2026-05-30 16:52:49] -rw-r--r--. 1 boinc boinc       100 May 30 13:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-30 16:52:49] -rwxr-xr-x. 1 boinc boinc      7986 May 30 13:21 run_atlas
[2026-05-30 16:52:49] -rw-r--r--. 1 boinc boinc       105 May 30 13:21 job.xml
[2026-05-30 16:52:49] -rw-r--r--. 1 boinc boinc      6543 May 30 14:19 init_data.xml
[2026-05-30 16:52:49] -rw-r--r--. 2 boinc boinc 309160225 May 30 14:19 EVNT.50532940._000365.pool.root.1
[2026-05-30 16:52:49] -rw-r--r--. 2 boinc boinc     15667 May 30 14:19 start_atlas.sh
[2026-05-30 16:52:49] drwxrwx--x. 2 boinc boinc      4096 May 30 14:19 shared
[2026-05-30 16:52:49] -rw-r--r--. 2 boinc boinc    697411 May 30 14:19 input.tar.gz
[2026-05-30 16:52:49] -rw-r--r--. 1 boinc boinc         0 May 30 14:19 boinc_lockfile
[2026-05-30 16:52:49] -rw-r--r--. 1 boinc boinc      2512 May 30 14:19 pandaJob.out
[2026-05-30 16:52:49] -rw-------. 1 boinc boinc    995585 May 30 14:19 agis_schedconf.cvmfs.json
[2026-05-30 16:52:49] -rw-------. 1 boinc boinc   1502789 May 30 14:19 agis_ddmendpoints.agis.ALL.json
[2026-05-30 16:52:49] -rw-------. 1 boinc boinc       444 May 30 14:19 workernode_map.json
[2026-05-30 16:52:49] drwx------. 5 boinc boinc      4096 May 30 14:19 pilot3
[2026-05-30 16:52:49] -rw-------. 1 boinc boinc 248106240 May 30 16:51 HITS.50533940._007808.pool.root.1
[2026-05-30 16:52:49] -rw-r--r--. 1 boinc boinc       486 May 30 16:51 boinc_task_state.xml
[2026-05-30 16:52:49] -rw-------. 1 boinc boinc      1027 May 30 16:51 memory_monitor_summary.json
[2026-05-30 16:52:49] -rw-------. 1 boinc boinc    284152 May 30 16:51 log.50533940._007808.job.log.tgz.1
[2026-05-30 16:52:49] -rw-------. 1 boinc boinc      6376 May 30 16:51 heartbeat_new.json
[2026-05-30 16:52:49] -rw-------. 1 boinc boinc      6267 May 30 16:51 heartbeat.json
[2026-05-30 16:52:49] -rw-------. 1 boinc boinc        95 May 30 16:52 pilot_heartbeat.json
[2026-05-30 16:52:49] -rw-r--r--. 1 boinc boinc        26 May 30 16:52 wrapper_checkpoint.txt
[2026-05-30 16:52:49] -rw-------. 1 boinc boinc      5195 May 30 16:52 pilotlog.txt
[2026-05-30 16:52:49] -rw-------. 1 boinc boinc    854112 May 30 16:52 log.50533940._007808.job.log.1
[2026-05-30 16:52:49] -rw-------. 1 boinc boinc       357 May 30 16:52 output.list
[2026-05-30 16:52:49] -rw-r--r--. 1 boinc boinc       410 May 30 16:52 runtime_log
[2026-05-30 16:52:49] -rw-------. 1 boinc boinc   1157120 May 30 16:52 result.tar.gz
[2026-05-30 16:52:49] -rw-r--r--. 1 boinc boinc      8844 May 30 16:52 runtime_log.err
[2026-05-30 16:52:49] -rw-------. 1 boinc boinc       662 May 30 16:52 9f0cc3a0422b.diag
[2026-05-30 16:52:49] -rw-r--r--. 1 boinc boinc      8192 May 30 16:52 boinc_mmap_file
[2026-05-30 16:52:49] -rw-r--r--. 1 boinc boinc     20797 May 30 16:52 stderr.txt
[2026-05-30 16:52:49] HITS file was successfully produced:
[2026-05-30 16:52:49] -rw-------. 1 boinc boinc 248106240 May 30 16:51 shared/HITS.pool.root.1
[2026-05-30 16:52:49]  *** Contents of shared directory: ***
[2026-05-30 16:52:49] total 546048
[2026-05-30 16:52:49] -rw-r--r--. 2 boinc boinc 309160225 May 30 14:19 ATLAS.root_0
[2026-05-30 16:52:49] -rw-r--r--. 2 boinc boinc     15667 May 30 14:19 start_atlas.sh
[2026-05-30 16:52:49] -rw-r--r--. 2 boinc boinc    697411 May 30 14:19 input.tar.gz
[2026-05-30 16:52:49] -rw-------. 1 boinc boinc 248106240 May 30 16:51 HITS.pool.root.1
[2026-05-30 16:52:49] -rw-------. 1 boinc boinc   1157120 May 30 16:52 result.tar.gz
16:52:50 (403991): run_atlas exited; CPU time 35368.092818
16:52:50 (403991): called boinc_finish(0)

</stderr_txt>
]]>

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