Stderr output

<core_client_version>8.2.13</core_client_version>
<![CDATA[
<stderr_txt>
09:54:41 (258223): wrapper (7.7.26015): starting
09:54:41 (258223): wrapper: running run_atlas (--nthreads 4)
[2026-05-30 09:54:41] Arguments: --nthreads 4
[2026-05-30 09:54:41] Threads: 4
[2026-05-30 09:54:41] Checking for CVMFS
[2026-05-30 09:54:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-30 09:54:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-30 09:54:41] Running cvmfs_config stat atlas.cern.ch
[2026-05-30 09:54:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-30 09:54:42] 2.13.3.0 214033 69 46244 159958 2 188 1664434 4096000 0 130560 0 108430 94.156 649801 569 http://cvmfs-egi.gridpp.rl.ac.uk:8000/cvmfs/atlas.cern.ch DIRECT 1
[2026-05-30 09:54:42] CVMFS is ok
[2026-05-30 09:54:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-30 09:54:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-30 09:54:42] Small home clusters do not require a local http proxy but it is suggested if
[2026-05-30 09:54:42] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-05-30 09:54:42] Further information can be found at the LHC@home message board.
[2026-05-30 09:54:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-30 09:54:42] Checking for apptainer binary...
[2026-05-30 09:54:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-30 09:54:42] Running /usr/bin/apptainer --version
[2026-05-30 09:54:42] apptainer version 1.5.0-1.fc44
[2026-05-30 09:54:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-30 09:54:42] fedora-legion
[2026-05-30 09:54:42] apptainer works
[2026-05-30 09:54:42] Set ATHENA_PROC_NUMBER=4
[2026-05-30 09:54:42] Set ATHENA_CORE_NUMBER=4
[2026-05-30 09:54:42] Starting ATLAS job with PandaID=7157447456
[2026-05-30 09:54:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-30 11:47:29]  *** The last 200 lines of the pilot log: ***
[2026-05-30 11:47:29] 2026-05-30 08:46:53,861 | INFO     | summary of transferred files:
[2026-05-30 11:47:29] 2026-05-30 08:46:53,861 | INFO     |  -- lfn=log.50533748._000371.job.log.tgz.1, status_code=0, status=transferred
[2026-05-30 11:47:29] 2026-05-30 08:46:53,861 | INFO     | stage-out finished correctly
[2026-05-30 11:47:29] 2026-05-30 08:46:53,885 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-30 11:47:29] 2026-05-30 08:46:55,905 | INFO     | job 7157447456 has state=finished
[2026-05-30 11:47:29] 2026-05-30 08:46:55,906 | INFO     | preparing for final server update for job 7157447456 in state='finished'
[2026-05-30 11:47:29] 2026-05-30 08:46:55,907 | INFO     | reading metadata from: /var/lib/boinc/slots/1/PanDA_Pilot-7157447456/jobReport.json
[2026-05-30 11:47:29] 2026-05-30 08:46:55,910 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/1/workernode_map.json
[2026-05-30 11:47:29] 2026-05-30 08:46:55,911 | INFO     | this job has now completed (state=finished)
[2026-05-30 11:47:29] 2026-05-30 08:46:55,911 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-30 11:47:29] 2026-05-30 08:46:55,911 | INFO     | log transfer has been attempted: DONE
[2026-05-30 11:47:29] 2026-05-30 08:46:55,911 | INFO     | job 7157447456 has finished - writing final server update
[2026-05-30 11:47:29] 2026-05-30 08:46:55,912 | INFO     | total number of processed events: 400 (read)
[2026-05-30 11:47:29] 2026-05-30 08:46:55,914 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-7157447456/memory_monitor_summary.json (trf name=prmon)
[2026-05-30 11:47:29] 2026-05-30 08:46:55,915 | INFO     | extracted standard info from prmon json
[2026-05-30 11:47:29] 2026-05-30 08:46:55,915 | INFO     | extracted standard memory fields from prmon json
[2026-05-30 11:47:29] 2026-05-30 08:46:55,915 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-30 11:47:29] 2026-05-30 08:46:55,915 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-30 11:47:29] 2026-05-30 08:46:55,915 | INFO     | fitting pss+swap vs Time
[2026-05-30 11:47:29] 2026-05-30 08:46:55,915 | INFO     | sum of square deviations: 412686807.5
[2026-05-30 11:47:29] 2026-05-30 08:46:55,916 | INFO     | sum of deviations: -6392594978.999996
[2026-05-30 11:47:29] 2026-05-30 08:46:55,916 | INFO     | mean x (centered): 0.0
[2026-05-30 11:47:29] 2026-05-30 08:46:55,916 | INFO     | mean y: 2428241.690909091
[2026-05-30 11:47:29] 2026-05-30 08:46:55,916 | INFO     | intersect: 2428241.690909091
[2026-05-30 11:47:29] 2026-05-30 08:46:55,916 | INFO     | chi2: 1.582972504379202
[2026-05-30 11:47:29] 2026-05-30 08:46:55,916 | INFO     | sum of square deviations: 358927660.0
[2026-05-30 11:47:29] 2026-05-30 08:46:55,916 | INFO     | sum of deviations: -5707873395.000002
[2026-05-30 11:47:29] 2026-05-30 08:46:55,916 | INFO     | mean x (centered): 0.0
[2026-05-30 11:47:29] 2026-05-30 08:46:55,916 | INFO     | mean y: 2430185.4
[2026-05-30 11:47:29] 2026-05-30 08:46:55,916 | INFO     | intersect: 2430185.4
[2026-05-30 11:47:29] 2026-05-30 08:46:55,916 | INFO     | chi2: 1.5818413164724552
[2026-05-30 11:47:29] 2026-05-30 08:46:55,916 | INFO     | current chi2=1.5818413164724552 (change=0.07145973184104311 %)
[2026-05-30 11:47:29] 2026-05-30 08:46:55,916 | INFO     | right removable region: 104
[2026-05-30 11:47:29] 2026-05-30 08:46:55,916 | INFO     | sum of square deviations: 358927660.0
[2026-05-30 11:47:29] 2026-05-30 08:46:55,916 | INFO     | sum of deviations: -18360106594.000004
[2026-05-30 11:47:29] 2026-05-30 08:46:55,916 | INFO     | mean x (centered): 0.0
[2026-05-30 11:47:29] 2026-05-30 08:46:55,916 | INFO     | mean y: 2461042.685714286
[2026-05-30 11:47:29] 2026-05-30 08:46:55,916 | INFO     | intersect: 2461042.685714286
[2026-05-30 11:47:29] 2026-05-30 08:46:55,917 | INFO     | chi2: 0.20148524289432912
[2026-05-30 11:47:29] 2026-05-30 08:46:55,917 | INFO     | current chi2=0.20148524289432912 (change=87.27171556442504 %)
[2026-05-30 11:47:29] 2026-05-30 08:46:55,917 | INFO     | sum of square deviations: 310052325.0
[2026-05-30 11:47:29] 2026-05-30 08:46:55,917 | INFO     | sum of deviations: -13563156965.5
[2026-05-30 11:47:29] 2026-05-30 08:46:55,917 | INFO     | mean x (centered): 0.0
[2026-05-30 11:47:29] 2026-05-30 08:46:55,917 | INFO     | mean y: 2446050.03
[2026-05-30 11:47:29] 2026-05-30 08:46:55,917 | INFO     | intersect: 2446050.03
[2026-05-30 11:47:29] 2026-05-30 08:46:55,917 | INFO     | chi2: 0.1839546325096073
[2026-05-30 11:47:29] 2026-05-30 08:46:55,917 | INFO     | current chi2=0.1839546325096073 (change=8.700691987609192 %)
[2026-05-30 11:47:29] 2026-05-30 08:46:55,917 | INFO     | left removable region: 10
[2026-05-30 11:47:29] 2026-05-30 08:46:55,917 | INFO     | sum of square deviations: 257521107.5
[2026-05-30 11:47:29] 2026-05-30 08:46:55,917 | INFO     | sum of deviations: -12490455434.5
[2026-05-30 11:47:29] 2026-05-30 08:46:55,917 | INFO     | mean x (centered): 0.0
[2026-05-30 11:47:29] 2026-05-30 08:46:55,917 | INFO     | mean y: 2449791.5425531915
[2026-05-30 11:47:29] 2026-05-30 08:46:55,917 | INFO     | intersect: 2449791.5425531915
[2026-05-30 11:47:29] 2026-05-30 08:46:55,917 | INFO     | chi2: 0.17799635715939252
[2026-05-30 11:47:29] 2026-05-30 08:46:55,917 | INFO     | current memory leak: -48.50 B/s (using 94 data points, chi2=0.18)
[2026-05-30 11:47:29] 2026-05-30 08:46:55,917 | INFO     | could have reported an average CPU frequency of 2799 MHz (7 samples)
[2026-05-30 11:47:29] 2026-05-30 08:46:55,918 | INFO     | ..............................
[2026-05-30 11:47:29] 2026-05-30 08:46:55,918 | INFO     | . Timing measurements:
[2026-05-30 11:47:29] 2026-05-30 08:46:55,918 | INFO     | . get job = 0 s
[2026-05-30 11:47:29] 2026-05-30 08:46:55,918 | INFO     | . initial setup = 4 s
[2026-05-30 11:47:29] 2026-05-30 08:46:55,918 | INFO     | . payload setup = 4 s
[2026-05-30 11:47:29] 2026-05-30 08:46:55,918 | INFO     | . stage-in = 0 s
[2026-05-30 11:47:29] 2026-05-30 08:46:55,918 | INFO     | . payload execution = 6701 s
[2026-05-30 11:47:29] 2026-05-30 08:46:55,918 | INFO     | . stage-out = 0 s
[2026-05-30 11:47:29] 2026-05-30 08:46:55,918 | INFO     | . log creation = 0 s
[2026-05-30 11:47:29] 2026-05-30 08:46:55,918 | INFO     | ..............................
[2026-05-30 11:47:29] 2026-05-30 08:46:56,444 | INFO     | 
[2026-05-30 11:47:29] 2026-05-30 08:46:56,444 | INFO     | job summary report
[2026-05-30 11:47:29] 2026-05-30 08:46:56,444 | INFO     | --------------------------------------------------
[2026-05-30 11:47:29] 2026-05-30 08:46:56,444 | INFO     | PanDA job id: 7157447456
[2026-05-30 11:47:29] 2026-05-30 08:46:56,445 | INFO     | task id: 50533748
[2026-05-30 11:47:29] 2026-05-30 08:46:56,445 | INFO     | errors: (none)
[2026-05-30 11:47:29] 2026-05-30 08:46:56,445 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-30 11:47:29] 2026-05-30 08:46:56,445 | INFO     | pilot state: finished 
[2026-05-30 11:47:29] 2026-05-30 08:46:56,445 | INFO     | transexitcode: 0
[2026-05-30 11:47:29] 2026-05-30 08:46:56,445 | INFO     | exeerrorcode: 0
[2026-05-30 11:47:29] 2026-05-30 08:46:56,445 | INFO     | exeerrordiag: 
[2026-05-30 11:47:29] 2026-05-30 08:46:56,445 | INFO     | exitcode: 0
[2026-05-30 11:47:29] 2026-05-30 08:46:56,445 | INFO     | exitmsg: OK
[2026-05-30 11:47:29] 2026-05-30 08:46:56,445 | INFO     | cpuconsumptiontime: 25804 s
[2026-05-30 11:47:29] 2026-05-30 08:46:56,445 | INFO     | nevents: 400
[2026-05-30 11:47:29] 2026-05-30 08:46:56,446 | INFO     | neventsw: 0
[2026-05-30 11:47:29] 2026-05-30 08:46:56,446 | INFO     | pid: 266739
[2026-05-30 11:47:29] 2026-05-30 08:46:56,446 | INFO     | pgrp: 266739
[2026-05-30 11:47:29] 2026-05-30 08:46:56,446 | INFO     | corecount: 4
[2026-05-30 11:47:29] 2026-05-30 08:46:56,446 | INFO     | event service: False
[2026-05-30 11:47:29] 2026-05-30 08:46:56,446 | INFO     | sizes: {0: 2265900, 1: 2267729, 11: 2267729, 6709: 2294948, 6711: 2304002, 6713: 2304140}
[2026-05-30 11:47:29] 2026-05-30 08:46:56,446 | INFO     | --------------------------------------------------
[2026-05-30 11:47:29] 2026-05-30 08:46:56,446 | INFO     | 
[2026-05-30 11:47:29] 2026-05-30 08:46:56,446 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2026-05-30 11:47:29] 2026-05-30 08:46:56,469 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-30 11:47:29] 2026-05-30 08:46:56,470 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-30 11:47:29] 2026-05-30 08:46:56,470 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-30 11:47:29] 2026-05-30 08:46:56,470 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-30 11:47:29] 2026-05-30 08:46:56,470 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-30 11:47:29] 2026-05-30 08:46:56,470 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-30 11:47:29] 2026-05-30 08:46:56,470 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-30 11:47:29] 2026-05-30 08:46:56,470 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-30 11:47:29] 2026-05-30 08:46:56,471 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-30 11:47:29] 2026-05-30 08:46:56,471 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-30 11:47:29] 2026-05-30 08:46:56,471 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-30 11:47:29] 2026-05-30 08:46:56,471 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-30 11:47:29] 2026-05-30 08:46:56,471 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-30 11:47:29] 2026-05-30 08:46:56,471 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-30 11:47:29] 2026-05-30 08:46:56,471 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-30 11:47:29] 2026-05-30 08:46:56,471 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-30 11:47:29] 2026-05-30 08:46:56,472 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-30 11:47:29] 2026-05-30 08:46:56,472 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-30 11:47:29] 2026-05-30 08:46:56,472 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-30 11:47:29] 2026-05-30 08:46:56,472 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-30 11:47:29] 2026-05-30 08:46:56,472 | INFO     | job 7157447456 has completed (purged errors)
[2026-05-30 11:47:29] 2026-05-30 08:46:56,472 | INFO     | overall cleanup function is called
[2026-05-30 11:47:29] 2026-05-30 08:46:57,478 | INFO     | --- collectZombieJob: --- 10, [266739]
[2026-05-30 11:47:29] 2026-05-30 08:46:57,479 | INFO     | zombie collector waiting for pid 266739
[2026-05-30 11:47:29] 2026-05-30 08:46:57,479 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-30 11:47:29] 2026-05-30 08:46:57,479 | INFO     | collected zombie processes
[2026-05-30 11:47:29] 2026-05-30 08:46:57,479 | INFO     | will attempt to kill all subprocesses of pid=266739
[2026-05-30 11:47:29] 2026-05-30 08:46:57,541 | INFO     | process IDs to be killed: [266739] (in reverse order)
[2026-05-30 11:47:29] 2026-05-30 08:46:57,581 | WARNING  | found no corresponding commands to process id(s)
[2026-05-30 11:47:29] 2026-05-30 08:46:57,581 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-30 11:47:29] 2026-05-30 08:46:57,584 | INFO     | did not find any defunct processes belonging to 266739
[2026-05-30 11:47:29] 2026-05-30 08:46:57,586 | INFO     | did not find any defunct processes belonging to 266739
[2026-05-30 11:47:29] 2026-05-30 08:46:57,586 | INFO     | Ready for new job
[2026-05-30 11:47:29] 2026-05-30 08:46:57,587 | INFO     | ***************************************
[2026-05-30 11:47:29] 2026-05-30 08:46:57,587 | INFO     | ***  PanDA Pilot version 3.13.1.30  ***
[2026-05-30 11:47:29] 2026-05-30 08:46:57,587 | INFO     | ***************************************
[2026-05-30 11:47:29] 2026-05-30 08:46:57,587 | INFO     | 
[2026-05-30 11:47:29] 2026-05-30 08:46:57,588 | INFO     | architecture information:
[2026-05-30 11:47:29] 2026-05-30 08:46:57,588 | INFO     | executing command: cat /etc/os-release
[2026-05-30 11:47:29] 2026-05-30 08:46:57,596 | INFO     | cat /etc/os-release:
[2026-05-30 11:47:29] NAME="CentOS Linux"
[2026-05-30 11:47:29] VERSION="7 (Core)"
[2026-05-30 11:47:29] ID="centos"
[2026-05-30 11:47:29] ID_LIKE="rhel fedora"
[2026-05-30 11:47:29] VERSION_ID="7"
[2026-05-30 11:47:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-30 11:47:29] ANSI_COLOR="0;31"
[2026-05-30 11:47:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-30 11:47:29] HOME_URL="https://www.centos.org/"
[2026-05-30 11:47:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-30 11:47:29] 
[2026-05-30 11:47:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-30 11:47:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-30 11:47:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-30 11:47:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-30 11:47:29] 
[2026-05-30 11:47:29] 2026-05-30 08:46:57,596 | INFO     | ***************************************
[2026-05-30 11:47:29] 2026-05-30 08:46:58,099 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2026-05-30 11:47:29] 2026-05-30 08:46:58,109 | INFO     | sufficient remaining disk space (716754124800 B)
[2026-05-30 11:47:29] 2026-05-30 08:46:58,109 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-30 11:47:29] 2026-05-30 08:46:58,109 | INFO     | current server update state: UPDATING_FINAL
[2026-05-30 11:47:29] 2026-05-30 08:46:58,109 | INFO     | update_server=False
[2026-05-30 11:47:29] 2026-05-30 08:46:58,109 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-30 11:47:29] 2026-05-30 08:46:58,109 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-30 11:47:29] 2026-05-30 08:46:58,110 | INFO     | aborting loop
[2026-05-30 11:47:29] 2026-05-30 08:46:58,488 | INFO     | all data control threads have been joined
[2026-05-30 11:47:29] 2026-05-30 08:46:59,112 | INFO     | all payload control threads have been joined
[2026-05-30 11:47:29] 2026-05-30 08:46:59,113 | INFO     | [job] job monitor thread has finished
[2026-05-30 11:47:29] 2026-05-30 08:46:59,115 | INFO     | [job] retrieve thread has finished
[2026-05-30 11:47:29] 2026-05-30 08:46:59,250 | INFO     | [payload] validate_post thread has finished
[2026-05-30 11:47:29] 2026-05-30 08:46:59,394 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-30 11:47:29] 2026-05-30 08:46:59,494 | INFO     | [data] control thread has finished
[2026-05-30 11:47:29] 2026-05-30 08:46:59,744 | INFO     | all job control threads have been joined
[2026-05-30 11:47:29] 2026-05-30 08:46:59,795 | INFO     | [payload] failed_post thread has finished
[2026-05-30 11:47:29] 2026-05-30 08:46:59,797 | INFO     | [data] copytool_in thread has finished
[2026-05-30 11:47:29] 2026-05-30 08:46:59,919 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-30 11:47:29] 2026-05-30 08:47:00,118 | INFO     | [payload] control thread has finished
[2026-05-30 11:47:29] 2026-05-30 08:47:00,325 | INFO     | [payload] execute_payloads thread has finished
[2026-05-30 11:47:29] 2026-05-30 08:47:00,336 | INFO     | [job] validate thread has finished
[2026-05-30 11:47:29] 2026-05-30 08:47:00,495 | INFO     | [job] create_data_payload thread has finished
[2026-05-30 11:47:29] 2026-05-30 08:47:00,601 | INFO     | [payload] validate_pre thread has finished
[2026-05-30 11:47:29] 2026-05-30 08:47:00,749 | INFO     | [job] control thread has finished
[2026-05-30 11:47:29] 2026-05-30 08:47:00,953 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-30 11:47:29] 2026-05-30 08:47:01,163 | INFO     | [monitor] cgroup control has ended
[2026-05-30 11:47:29] 2026-05-30 08:47:01,400 | INFO     | [data] copytool_out thread has finished
[2026-05-30 11:47:29] 2026-05-30 08:47:01,959 | INFO     | [job] queue monitor thread has finished
[2026-05-30 11:47:29] 2026-05-30 08:47:03,925 | INFO     | [data] queue_monitor thread has finished
[2026-05-30 11:47:29] 2026-05-30 08:47:08,286 | INFO     | job.realtimelogging is not enabled
[2026-05-30 11:47:29] 2026-05-30 08:47:09,292 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-30 11:47:29] 2026-05-30 08:47:09,862 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140515898820416)>', '<ExcThread(monitor, started 140515282511616)>']
[2026-05-30 11:47:29] 2026-05-30 08:47:14,888 | INFO     | all workflow threads have been joined
[2026-05-30 11:47:29] 2026-05-30 08:47:14,888 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-30 11:47:29] 2026-05-30 08:47:14,888 | INFO     | traces error code: 0
[2026-05-30 11:47:29] 2026-05-30 08:47:14,888 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-30 11:47:29] 2026-05-30 08:47:28,327 | INFO     | PID=262146 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-05-30 11:47:29] 2026-05-30 08:47:28,328 | INFO     | found 0 job(s) in 20 queues
[2026-05-30 11:47:29] 2026-05-30 08:47:28,328 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-30 11:47:29] 2026-05-30 08:47:28,328 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-30 11:47:29] 2026-05-30 08:47:28,328 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-30 11:47:29] 2026-05-30 08:47:28,328 | INFO     | [monitor] control thread has ended
[2026-05-30 11:47:29] 2026-05-30 08:47:28,377 [wrapper] ==== pilot stdout END ====
[2026-05-30 11:47:29] 2026-05-30 08:47:28,380 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-30 11:47:29] 2026-05-30 08:47:28,381 [wrapper] pilotpid: 262146
[2026-05-30 11:47:29] 2026-05-30 08:47:28,383 [wrapper] Pilot exit status: 0
[2026-05-30 11:47:29] 2026-05-30 08:47:28,963 [wrapper] pandaids: 7157447456
[2026-05-30 11:47:29] 2026-05-30 08:47:28,994 [wrapper] cleanup supervisor_pilot  287925 262147
[2026-05-30 11:47:29] 2026-05-30 08:47:28,998 [wrapper] Test setup, not cleaning
[2026-05-30 11:47:29] 2026-05-30 08:47:29,002 [wrapper] apfmon messages muted
[2026-05-30 11:47:29] 2026-05-30 08:47:29,005 [wrapper] ==== wrapper stdout END ====
[2026-05-30 11:47:29] 2026-05-30 08:47:29,008 [wrapper] ==== wrapper stderr END ====
[2026-05-30 11:47:29]  *** Error codes and diagnostics ***
[2026-05-30 11:47:29]     "exeErrorCode": 0,
[2026-05-30 11:47:29]     "pilotErrorCode": 0,
[2026-05-30 11:47:29]  *** Listing of results directory ***
[2026-05-30 11:47:29] yhteens&#195;&#164; 516388
[2026-05-30 11:47:29] -rwx------. 1 boinc boinc     36281 29. 5. 00:29 runpilot2-wrapper.sh
[2026-05-30 11:47:29] -rw-r--r--. 1 boinc boinc      5631 29. 5. 00:29 queuedata.json
[2026-05-30 11:47:29] -rw-r--r--. 1 boinc boinc    709501 29. 5. 00:29 pilot3.tar.gz
[2026-05-30 11:47:29] -rw-r--r--. 1 boinc boinc       100 30. 5. 09:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-30 11:47:29] -rwxr-xr-x. 1 boinc boinc      7986 30. 5. 09:54 run_atlas
[2026-05-30 11:47:29] -rw-r--r--. 1 boinc boinc       105 30. 5. 09:54 job.xml
[2026-05-30 11:47:29] -rw-r--r--. 2 boinc boinc 264398725 30. 5. 09:54 EVNT.50469639._000015.pool.root.1
[2026-05-30 11:47:29] -rw-r--r--. 2 boinc boinc    722752 30. 5. 09:54 input.tar.gz
[2026-05-30 11:47:29] -rw-r--r--. 2 boinc boinc     15667 30. 5. 09:54 start_atlas.sh
[2026-05-30 11:47:29] drwxrwx--x. 1 boinc boinc        76 30. 5. 09:54 shared
[2026-05-30 11:47:29] -rw-r--r--. 1 boinc boinc         0 30. 5. 09:54 boinc_setup_complete
[2026-05-30 11:47:29] -rw-r--r--. 1 boinc boinc         0 30. 5. 09:54 boinc_lockfile
[2026-05-30 11:47:29] -rw-r--r--. 1 boinc boinc      2615 30. 5. 09:54 pandaJob.out
[2026-05-30 11:47:29] -rw-------. 1 boinc boinc    995230 30. 5. 09:54 agis_schedconf.cvmfs.json
[2026-05-30 11:47:29] -rw-------. 1 boinc boinc         0 30. 5. 09:54 agis_ddmendpoints.agis.ALL.json
[2026-05-30 11:47:29] -rw-------. 1 boinc boinc   1251485 30. 5. 09:54 cric_ddmendpoints.json
[2026-05-30 11:47:29] -rw-------. 1 boinc boinc       421 30. 5. 09:54 workernode_map.json
[2026-05-30 11:47:29] drwx------. 1 boinc boinc       530 30. 5. 09:54 pilot3
[2026-05-30 11:47:29] -rw-r--r--. 1 boinc boinc      9160 30. 5. 10:09 init_data.xml
[2026-05-30 11:47:29] -rw-------. 1 boinc boinc 258662661 30. 5. 11:46 HITS.50533748._000371.pool.root.1
[2026-05-30 11:47:29] -rw-------. 1 boinc boinc        95 30. 5. 11:46 pilot_heartbeat.json
[2026-05-30 11:47:29] -rw-r--r--. 1 boinc boinc       487 30. 5. 11:46 boinc_task_state.xml
[2026-05-30 11:47:29] -rw-------. 1 boinc boinc      1014 30. 5. 11:46 memory_monitor_summary.json
[2026-05-30 11:47:29] -rw-------. 1 boinc boinc    271213 30. 5. 11:46 log.50533748._000371.job.log.tgz.1
[2026-05-30 11:47:29] -rw-------. 1 boinc boinc      6349 30. 5. 11:46 heartbeat_new.json
[2026-05-30 11:47:29] -rw-------. 1 boinc boinc      6240 30. 5. 11:46 heartbeat.json
[2026-05-30 11:47:29] -rw-r--r--. 1 boinc boinc      8192 30. 5. 11:47 boinc_mmap_file
[2026-05-30 11:47:29] -rw-r--r--. 1 boinc boinc        27 30. 5. 11:47 wrapper_checkpoint.txt
[2026-05-30 11:47:29] -rw-------. 1 boinc boinc       746 30. 5. 11:47 pilotlog.txt
[2026-05-30 11:47:29] -rw-------. 1 boinc boinc    636480 30. 5. 11:47 log.50533748._000371.job.log.1
[2026-05-30 11:47:29] -rw-------. 1 boinc boinc       357 30. 5. 11:47 output.list
[2026-05-30 11:47:29] -rw-r--r--. 1 boinc boinc       410 30. 5. 11:47 runtime_log
[2026-05-30 11:47:29] -rw-------. 1 boinc boinc    921600 30. 5. 11:47 result.tar.gz
[2026-05-30 11:47:29] -rw-r--r--. 1 boinc boinc      8480 30. 5. 11:47 runtime_log.err
[2026-05-30 11:47:29] -rw-------. 1 boinc boinc       664 30. 5. 11:47 b3bcfa61a2f1.diag
[2026-05-30 11:47:29] -rw-r--r--. 1 boinc boinc     21266 30. 5. 11:47 stderr.txt
[2026-05-30 11:47:29] HITS file was successfully produced:
[2026-05-30 11:47:29] -rw-------. 1 boinc boinc 258662661 30. 5. 11:46 shared/HITS.pool.root.1
[2026-05-30 11:47:29]  *** Contents of shared directory: ***
[2026-05-30 11:47:29] yhteens&#195;&#164; 512432
[2026-05-30 11:47:29] -rw-r--r--. 2 boinc boinc 264398725 30. 5. 09:54 ATLAS.root_0
[2026-05-30 11:47:29] -rw-r--r--. 2 boinc boinc    722752 30. 5. 09:54 input.tar.gz
[2026-05-30 11:47:29] -rw-r--r--. 2 boinc boinc     15667 30. 5. 09:54 start_atlas.sh
[2026-05-30 11:47:29] -rw-------. 1 boinc boinc 258662661 30. 5. 11:46 HITS.pool.root.1
[2026-05-30 11:47:29] -rw-------. 1 boinc boinc    921600 30. 5. 11:47 result.tar.gz
11:47:32 (258223): run_atlas exited; CPU time 25877.188949
11:47:32 (258223): called boinc_finish(0)

</stderr_txt>
]]>

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