Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:23:55 (3907249): wrapper (7.7.26015): starting
09:23:55 (3907249): wrapper: running run_atlas (--nthreads 12)
[2026-05-30 09:23:55] Arguments: --nthreads 12
[2026-05-30 09:23:55] Threads: 12
[2026-05-30 09:23:55] Checking for CVMFS
[2026-05-30 09:23:55] No cvmfs_config command found, will try listing directly
[2026-05-30 09:23:55] CVMFS is ok
[2026-05-30 09:23:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-30 09:23:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-30 09:23:55] Further information can be found at the LHC@home message board.
[2026-05-30 09:23:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-30 09:23:55] Checking for apptainer binary...
[2026-05-30 09:23:55] which: no apptainer in ((null))
[2026-05-30 09:23:55] apptainer is not installed, using version from CVMFS
[2026-05-30 09:23:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-30 09:23:55] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot156/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut20.grid.cesnet.cz
[2026-05-30 09:23:55] apptainer works
[2026-05-30 09:23:55] Set ATHENA_PROC_NUMBER=12
[2026-05-30 09:23:55] Set ATHENA_CORE_NUMBER=12
[2026-05-30 09:23:55] Starting ATLAS job with PandaID=7157922623
[2026-05-30 09:23:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot156/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-30 09:48:10]  *** The last 200 lines of the pilot log: ***
[2026-05-30 09:48:10]  domain=
[2026-05-30 09:48:10]  filesize=337891
[2026-05-30 09:48:10]  filetype=log
[2026-05-30 09:48:10]  guid=86cbf9f4-7e8e-41b2-8bb7-94d91bc40e1a
[2026-05-30 09:48:10]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-05-30 09:48:10]  is_altstaged=None
[2026-05-30 09:48:10]  is_tar=False
[2026-05-30 09:48:10]  lfn=log.50533940._005069.job.log.tgz.1
[2026-05-30 09:48:10]  mtime=0
[2026-05-30 09:48:10]  protocol_id=None
[2026-05-30 09:48:10]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-05-30 09:48:10]  replicas=None
[2026-05-30 09:48:10]  scope=mc23_13p6TeV
[2026-05-30 09:48:10]  status=None
[2026-05-30 09:48:10]  status_code=0
[2026-05-30 09:48:10]  storage_token=
[2026-05-30 09:48:10]  surl=/var/lib/boinc/var/slot156/slots/2/PanDA_Pilot-7157922623/log.50533940._005069.job.log.tgz.1
[2026-05-30 09:48:10]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a6/6a/log.50533940._005069.job.log.tgz.1
[2026-05-30 09:48:10]  workdir=None
[2026-05-30 09:48:10] ]
[2026-05-30 09:48:10] 2026-05-30 07:47:35,398 | INFO     | transferring file log.50533940._005069.job.log.tgz.1 from /var/lib/boinc/var/slot156/slots/2/PanDA_Pilot-7157922623/log.50533940._005069.job.log.tgz.1 to /var/lib/
[2026-05-30 09:48:10] 2026-05-30 07:47:35,398 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot156/slots/2/PanDA_Pilot-7157922623/log.50533940._005069.job.log.tgz.1 /var/lib/boinc/var/slot156/slots/2/
[2026-05-30 09:48:10] 2026-05-30 07:47:35,406 | INFO     | adding to output.list: log.50533940._005069.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a6/6a/log.50533940._005069.job.log.tg
[2026-05-30 09:48:10] 2026-05-30 07:47:35,406 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-05-30 09:48:10] 2026-05-30 07:47:35,406 | INFO     | summary of transferred files:
[2026-05-30 09:48:10] 2026-05-30 07:47:35,406 | INFO     |  -- lfn=log.50533940._005069.job.log.tgz.1, status_code=0, status=transferred
[2026-05-30 09:48:10] 2026-05-30 07:47:35,406 | INFO     | stage-out finished correctly
[2026-05-30 09:48:10] 2026-05-30 07:47:37,397 | WARNING  | process 3918097 can no longer be monitored (due to stat problems) - aborting
[2026-05-30 09:48:10] 2026-05-30 07:47:37,397 | INFO     | using path: /var/lib/boinc/var/slot156/slots/2/PanDA_Pilot-7157922623/memory_monitor_summary.json (trf name=prmon)
[2026-05-30 09:48:10] 2026-05-30 07:47:37,550 | INFO     | number of running child processes to parent process 3918097: 1
[2026-05-30 09:48:10] 2026-05-30 07:47:37,550 | INFO     | maximum number of monitored processes: 6
[2026-05-30 09:48:10] 2026-05-30 07:47:38,473 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-30 09:48:10] 2026-05-30 07:47:38,529 | INFO     | job 7157922623 has state=finished
[2026-05-30 09:48:10] 2026-05-30 07:47:38,529 | INFO     | preparing for final server update for job 7157922623 in state='finished'
[2026-05-30 09:48:10] 2026-05-30 07:47:38,529 | INFO     | reading metadata from: /var/lib/boinc/var/slot156/slots/2/PanDA_Pilot-7157922623/jobReport.json
[2026-05-30 09:48:10] 2026-05-30 07:47:38,530 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot156/slots/2/workernode_map.json
[2026-05-30 09:48:10] 2026-05-30 07:47:38,530 | INFO     | this job has now completed (state=finished)
[2026-05-30 09:48:10] 2026-05-30 07:47:38,530 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-30 09:48:10] 2026-05-30 07:47:38,530 | INFO     | log transfer has been attempted: DONE
[2026-05-30 09:48:10] 2026-05-30 07:47:38,530 | INFO     | job 7157922623 has finished - writing final server update
[2026-05-30 09:48:10] 2026-05-30 07:47:38,531 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_252098/.job.ad'
[2026-05-30 09:48:10] 2026-05-30 07:47:38,531 | INFO     | total number of processed events: 400 (read)
[2026-05-30 09:48:10] 2026-05-30 07:47:38,540 | INFO     | using path: /var/lib/boinc/var/slot156/slots/2/PanDA_Pilot-7157922623/memory_monitor_summary.json (trf name=prmon)
[2026-05-30 09:48:10] 2026-05-30 07:47:38,540 | INFO     | extracted standard info from prmon json
[2026-05-30 09:48:10] 2026-05-30 07:47:38,540 | INFO     | extracted standard memory fields from prmon json
[2026-05-30 09:48:10] 2026-05-30 07:47:38,540 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-30 09:48:10] 2026-05-30 07:47:38,540 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-30 09:48:10] 2026-05-30 07:47:38,541 | INFO     | fitting pss+swap vs Time
[2026-05-30 09:48:10] 2026-05-30 07:47:38,541 | INFO     | sum of square deviations: 1265140.0
[2026-05-30 09:48:10] 2026-05-30 07:47:38,541 | INFO     | sum of deviations: 167902134.0
[2026-05-30 09:48:10] 2026-05-30 07:47:38,541 | INFO     | mean x (centered): 0.0
[2026-05-30 09:48:10] 2026-05-30 07:47:38,541 | INFO     | mean y: 2992478.5
[2026-05-30 09:48:10] 2026-05-30 07:47:38,541 | INFO     | intersect: 2992478.5
[2026-05-30 09:48:10] 2026-05-30 07:47:38,541 | INFO     | chi2: 0.004482062542715543
[2026-05-30 09:48:10] 2026-05-30 07:47:38,541 | INFO     | current memory leak: 132.71 B/s (using 16 data points, chi2=0.00)
[2026-05-30 09:48:10] 2026-05-30 07:47:38,541 | INFO     | could have reported an average CPU frequency of 3691 MHz (4 samples)
[2026-05-30 09:48:10] 2026-05-30 07:47:38,541 | INFO     | ..............................
[2026-05-30 09:48:10] 2026-05-30 07:47:38,541 | INFO     | . Timing measurements:
[2026-05-30 09:48:10] 2026-05-30 07:47:38,541 | INFO     | . get job = 0 s
[2026-05-30 09:48:10] 2026-05-30 07:47:38,541 | INFO     | . initial setup = 3 s
[2026-05-30 09:48:10] 2026-05-30 07:47:38,541 | INFO     | . payload setup = 3 s
[2026-05-30 09:48:10] 2026-05-30 07:47:38,541 | INFO     | . stage-in = 0 s
[2026-05-30 09:48:10] 2026-05-30 07:47:38,541 | INFO     | . payload execution = 1393 s
[2026-05-30 09:48:10] 2026-05-30 07:47:38,541 | INFO     | . stage-out = 0 s
[2026-05-30 09:48:10] 2026-05-30 07:47:38,541 | INFO     | . log creation = 0 s
[2026-05-30 09:48:10] 2026-05-30 07:47:38,541 | INFO     | ..............................
[2026-05-30 09:48:10] 2026-05-30 07:47:38,568 | INFO     | 
[2026-05-30 09:48:10] 2026-05-30 07:47:38,568 | INFO     | job summary report
[2026-05-30 09:48:10] 2026-05-30 07:47:38,569 | INFO     | --------------------------------------------------
[2026-05-30 09:48:10] 2026-05-30 07:47:38,569 | INFO     | PanDA job id: 7157922623
[2026-05-30 09:48:10] 2026-05-30 07:47:38,569 | INFO     | task id: 50533940
[2026-05-30 09:48:10] 2026-05-30 07:47:38,569 | INFO     | errors: (none)
[2026-05-30 09:48:10] 2026-05-30 07:47:38,569 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-30 09:48:10] 2026-05-30 07:47:38,569 | INFO     | pilot state: finished 
[2026-05-30 09:48:10] 2026-05-30 07:47:38,569 | INFO     | transexitcode: 0
[2026-05-30 09:48:10] 2026-05-30 07:47:38,569 | INFO     | exeerrorcode: 0
[2026-05-30 09:48:10] 2026-05-30 07:47:38,569 | INFO     | exeerrordiag: 
[2026-05-30 09:48:10] 2026-05-30 07:47:38,569 | INFO     | exitcode: 0
[2026-05-30 09:48:10] 2026-05-30 07:47:38,569 | INFO     | exitmsg: OK
[2026-05-30 09:48:10] 2026-05-30 07:47:38,569 | INFO     | cpuconsumptiontime: 14767 s
[2026-05-30 09:48:10] 2026-05-30 07:47:38,569 | INFO     | nevents: 400
[2026-05-30 09:48:10] 2026-05-30 07:47:38,569 | INFO     | neventsw: 0
[2026-05-30 09:48:10] 2026-05-30 07:47:38,569 | INFO     | pid: 3918097
[2026-05-30 09:48:10] 2026-05-30 07:47:38,569 | INFO     | pgrp: 3918097
[2026-05-30 09:48:10] 2026-05-30 07:47:38,569 | INFO     | corecount: 12
[2026-05-30 09:48:10] 2026-05-30 07:47:38,569 | INFO     | event service: False
[2026-05-30 09:48:10] 2026-05-30 07:47:38,569 | INFO     | sizes: {0: 2267570, 11: 2267570, 1400: 2292258, 1402: 2301280, 1405: 2301530}
[2026-05-30 09:48:10] 2026-05-30 07:47:38,569 | INFO     | --------------------------------------------------
[2026-05-30 09:48:10] 2026-05-30 07:47:38,569 | INFO     | 
[2026-05-30 09:48:10] 2026-05-30 07:47:38,569 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot156/slots/2
[2026-05-30 09:48:10] 2026-05-30 07:47:38,581 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-30 09:48:10] 2026-05-30 07:47:38,581 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-30 09:48:10] 2026-05-30 07:47:38,582 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-30 09:48:10] 2026-05-30 07:47:38,582 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-30 09:48:10] 2026-05-30 07:47:38,582 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-30 09:48:10] 2026-05-30 07:47:38,582 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-30 09:48:10] 2026-05-30 07:47:38,582 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-30 09:48:10] 2026-05-30 07:47:38,582 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-30 09:48:10] 2026-05-30 07:47:38,582 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-30 09:48:10] 2026-05-30 07:47:38,582 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-30 09:48:10] 2026-05-30 07:47:38,582 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-30 09:48:10] 2026-05-30 07:47:38,582 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-30 09:48:10] 2026-05-30 07:47:38,582 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-30 09:48:10] 2026-05-30 07:47:38,582 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-30 09:48:10] 2026-05-30 07:47:38,582 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-30 09:48:10] 2026-05-30 07:47:38,582 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-30 09:48:10] 2026-05-30 07:47:38,582 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-30 09:48:10] 2026-05-30 07:47:38,582 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-30 09:48:10] 2026-05-30 07:47:38,582 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-30 09:48:10] 2026-05-30 07:47:38,582 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-30 09:48:10] 2026-05-30 07:47:38,582 | INFO     | job 7157922623 has completed (purged errors)
[2026-05-30 09:48:10] 2026-05-30 07:47:38,582 | INFO     | overall cleanup function is called
[2026-05-30 09:48:10] 2026-05-30 07:47:39,588 | INFO     | --- collectZombieJob: --- 10, [3918097]
[2026-05-30 09:48:10] 2026-05-30 07:47:39,589 | INFO     | zombie collector waiting for pid 3918097
[2026-05-30 09:48:10] 2026-05-30 07:47:39,589 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-30 09:48:10] 2026-05-30 07:47:39,589 | INFO     | collected zombie processes
[2026-05-30 09:48:10] 2026-05-30 07:47:39,589 | INFO     | will attempt to kill all subprocesses of pid=3918097
[2026-05-30 09:48:10] 2026-05-30 07:47:39,737 | INFO     | process IDs to be killed: [3918097] (in reverse order)
[2026-05-30 09:48:10] 2026-05-30 07:47:39,814 | WARNING  | found no corresponding commands to process id(s)
[2026-05-30 09:48:10] 2026-05-30 07:47:39,814 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-30 09:48:10] 2026-05-30 07:47:39,828 | INFO     | did not find any defunct processes belonging to 3918097
[2026-05-30 09:48:10] 2026-05-30 07:47:39,836 | INFO     | did not find any defunct processes belonging to 3918097
[2026-05-30 09:48:10] 2026-05-30 07:47:39,836 | INFO     | Ready for new job
[2026-05-30 09:48:10] 2026-05-30 07:47:39,836 | INFO     | ***************************************
[2026-05-30 09:48:10] 2026-05-30 07:47:39,837 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-30 09:48:10] 2026-05-30 07:47:39,837 | INFO     | ***************************************
[2026-05-30 09:48:10] 2026-05-30 07:47:39,837 | INFO     | 
[2026-05-30 09:48:10] 2026-05-30 07:47:39,840 | INFO     | architecture information:
[2026-05-30 09:48:10] 2026-05-30 07:47:39,840 | INFO     | executing command: cat /etc/os-release
[2026-05-30 09:48:10] 2026-05-30 07:47:39,845 | INFO     | cat /etc/os-release:
[2026-05-30 09:48:10] NAME="CentOS Linux"
[2026-05-30 09:48:10] VERSION="7 (Core)"
[2026-05-30 09:48:10] ID="centos"
[2026-05-30 09:48:10] ID_LIKE="rhel fedora"
[2026-05-30 09:48:10] VERSION_ID="7"
[2026-05-30 09:48:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-30 09:48:10] ANSI_COLOR="0;31"
[2026-05-30 09:48:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-30 09:48:10] HOME_URL="https://www.centos.org/"
[2026-05-30 09:48:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-30 09:48:10] 
[2026-05-30 09:48:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-30 09:48:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-30 09:48:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-30 09:48:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-30 09:48:10] 
[2026-05-30 09:48:10] 2026-05-30 07:47:39,845 | INFO     | ***************************************
[2026-05-30 09:48:10] 2026-05-30 07:47:40,347 | INFO     | executing command: df -mP /var/lib/boinc/var/slot156/slots/2
[2026-05-30 09:48:10] 2026-05-30 07:47:40,353 | INFO     | sufficient remaining disk space (329296904192 B)
[2026-05-30 09:48:10] 2026-05-30 07:47:40,354 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-30 09:48:10] 2026-05-30 07:47:40,354 | INFO     | current server update state: UPDATING_FINAL
[2026-05-30 09:48:10] 2026-05-30 07:47:40,354 | INFO     | update_server=False
[2026-05-30 09:48:10] 2026-05-30 07:47:40,354 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-30 09:48:10] 2026-05-30 07:47:40,354 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-30 09:48:10] 2026-05-30 07:47:40,354 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-30 09:48:10] 2026-05-30 07:47:40,492 | INFO     | all job control threads have been joined
[2026-05-30 09:48:10] 2026-05-30 07:47:40,589 | INFO     | all payload control threads have been joined
[2026-05-30 09:48:10] 2026-05-30 07:47:40,938 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-30 09:48:10] 2026-05-30 07:47:41,063 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-30 09:48:10] 2026-05-30 07:47:41,063 | INFO     | aborting loop
[2026-05-30 09:48:10] 2026-05-30 07:47:41,277 | INFO     | all data control threads have been joined
[2026-05-30 09:48:10] 2026-05-30 07:47:41,358 | INFO     | [job] retrieve thread has finished
[2026-05-30 09:48:10] 2026-05-30 07:47:41,360 | INFO     | [job] queue monitor thread has finished
[2026-05-30 09:48:10] 2026-05-30 07:47:41,497 | INFO     | [job] control thread has finished
[2026-05-30 09:48:10] 2026-05-30 07:47:41,591 | INFO     | [payload] control thread has finished
[2026-05-30 09:48:10] 2026-05-30 07:47:41,765 | INFO     | [payload] failed_post thread has finished
[2026-05-30 09:48:10] 2026-05-30 07:47:42,068 | INFO     | [job] job monitor thread has finished
[2026-05-30 09:48:10] 2026-05-30 07:47:42,073 | INFO     | [payload] execute_payloads thread has finished
[2026-05-30 09:48:10] 2026-05-30 07:47:42,089 | INFO     | [job] validate thread has finished
[2026-05-30 09:48:10] 2026-05-30 07:47:42,098 | INFO     | [job] create_data_payload thread has finished
[2026-05-30 09:48:10] 2026-05-30 07:47:42,192 | INFO     | [payload] validate_pre thread has finished
[2026-05-30 09:48:10] 2026-05-30 07:47:42,275 | INFO     | [data] copytool_in thread has finished
[2026-05-30 09:48:10] 2026-05-30 07:47:42,282 | INFO     | [data] control thread has finished
[2026-05-30 09:48:10] 2026-05-30 07:47:42,596 | INFO     | [payload] validate_post thread has finished
[2026-05-30 09:48:10] 2026-05-30 07:47:42,691 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-30 09:48:10] 2026-05-30 07:47:42,943 | INFO     | [data] copytool_out thread has finished
[2026-05-30 09:48:10] 2026-05-30 07:47:44,360 | INFO     | [data] queue_monitor thread has finished
[2026-05-30 09:48:10] 2026-05-30 07:48:03,796 | INFO     | [monitor] cgroup control has ended
[2026-05-30 09:48:10] 2026-05-30 07:48:04,133 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23384519391040)>', '<ExcThread(monitor, started 23384215774976)>']
[2026-05-30 09:48:10] 2026-05-30 07:48:09,158 | INFO     | all workflow threads have been joined
[2026-05-30 09:48:10] 2026-05-30 07:48:09,158 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-30 09:48:10] 2026-05-30 07:48:09,159 | INFO     | traces error code: 0
[2026-05-30 09:48:10] 2026-05-30 07:48:09,159 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-30 09:48:10] 2026-05-30 07:48:10,618 | INFO     | PID=3911868 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-30 09:48:10] 2026-05-30 07:48:10,619 | INFO     | .. there are 2 such processes running
[2026-05-30 09:48:10] 2026-05-30 07:48:10,619 | INFO     | found 0 job(s) in 20 queues
[2026-05-30 09:48:10] 2026-05-30 07:48:10,619 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-30 09:48:10] 2026-05-30 07:48:10,619 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-30 09:48:10] 2026-05-30 07:48:10,619 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-30 09:48:10] 2026-05-30 07:48:10,619 | INFO     | [monitor] control thread has ended
[2026-05-30 09:48:10] 2026-05-30 07:48:10,720 [wrapper] ==== pilot stdout END ====
[2026-05-30 09:48:10] 2026-05-30 07:48:10,722 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-30 09:48:10] 2026-05-30 07:48:10,723 [wrapper] pilotpid: 3911868
[2026-05-30 09:48:10] 2026-05-30 07:48:10,724 [wrapper] Pilot exit status: 0
[2026-05-30 09:48:10] 2026-05-30 07:48:10,729 [wrapper] pandaids: 7157922623
[2026-05-30 09:48:10] 2026-05-30 07:48:10,790 [wrapper] cleanup supervisor_pilot 3946272 3911869
[2026-05-30 09:48:10] 2026-05-30 07:48:10,792 [wrapper] Test setup, not cleaning
[2026-05-30 09:48:10] 2026-05-30 07:48:10,793 [wrapper] apfmon messages muted
[2026-05-30 09:48:10] 2026-05-30 07:48:10,795 [wrapper] ==== wrapper stdout END ====
[2026-05-30 09:48:10] 2026-05-30 07:48:10,796 [wrapper] ==== wrapper stderr END ====
[2026-05-30 09:48:10]  *** Error codes and diagnostics ***
[2026-05-30 09:48:10]     "exeErrorCode": 0,
[2026-05-30 09:48:10]     "pilotErrorCode": 0,
[2026-05-30 09:48:10]  *** Listing of results directory ***
[2026-05-30 09:48:10] total 544808
[2026-05-30 09:48:10] -rw-r--r--. 1 boinc boinc      5631 May 30 03:18 queuedata.json
[2026-05-30 09:48:10] -rw-r--r--. 1 boinc boinc    683926 May 30 03:18 pilot3.tar.gz
[2026-05-30 09:48:10] -rwx------. 1 boinc boinc     36281 May 30 03:18 runpilot2-wrapper.sh
[2026-05-30 09:48:10] -rw-r--r--. 1 boinc boinc       100 May 30 08:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-30 09:48:10] -rwxr-xr-x. 1 boinc boinc      7986 May 30 08:04 run_atlas
[2026-05-30 09:48:10] -rw-r--r--. 1 boinc boinc       105 May 30 08:04 job.xml
[2026-05-30 09:48:10] -rw-r--r--. 2 boinc boinc 311179239 May 30 09:23 EVNT.50532940._000254.pool.root.1
[2026-05-30 09:48:10] -rw-r--r--. 2 boinc boinc     15667 May 30 09:23 start_atlas.sh
[2026-05-30 09:48:10] drwxrwx--x. 2 boinc boinc      4096 May 30 09:23 shared
[2026-05-30 09:48:10] -rw-r--r--. 2 boinc boinc    697409 May 30 09:23 input.tar.gz
[2026-05-30 09:48:10] -rw-r--r--. 1 boinc boinc      6629 May 30 09:23 init_data.xml
[2026-05-30 09:48:10] -rw-r--r--. 1 boinc boinc         0 May 30 09:23 boinc_lockfile
[2026-05-30 09:48:10] -rw-r--r--. 1 boinc boinc      2513 May 30 09:23 pandaJob.out
[2026-05-30 09:48:10] -rw-------. 1 boinc boinc    995230 May 30 09:23 agis_schedconf.cvmfs.json
[2026-05-30 09:48:10] -rw-------. 1 boinc boinc   1502789 May 30 09:23 agis_ddmendpoints.agis.ALL.json
[2026-05-30 09:48:10] -rw-------. 1 boinc boinc       445 May 30 09:24 workernode_map.json
[2026-05-30 09:48:10] drwx------. 5 boinc boinc      4096 May 30 09:24 pilot3
[2026-05-30 09:48:10] -rw-------. 1 boinc boinc 241537259 May 30 09:47 HITS.50533940._005069.pool.root.1
[2026-05-30 09:48:10] -rw-r--r--. 1 boinc boinc       487 May 30 09:47 boinc_task_state.xml
[2026-05-30 09:48:10] -rw-------. 1 boinc boinc        95 May 30 09:47 pilot_heartbeat.json
[2026-05-30 09:48:10] -rw-------. 1 boinc boinc      1024 May 30 09:47 memory_monitor_summary.json
[2026-05-30 09:48:10] -rw-------. 1 boinc boinc    337891 May 30 09:47 log.50533940._005069.job.log.tgz.1
[2026-05-30 09:48:10] -rw-------. 1 boinc boinc      6371 May 30 09:47 heartbeat_new.json
[2026-05-30 09:48:10] -rw-------. 1 boinc boinc      6262 May 30 09:47 heartbeat.json
[2026-05-30 09:48:10] -rw-r--r--. 1 boinc boinc      8192 May 30 09:48 boinc_mmap_file
[2026-05-30 09:48:10] -rw-r--r--. 1 boinc boinc        27 May 30 09:48 wrapper_checkpoint.txt
[2026-05-30 09:48:10] -rw-------. 1 boinc boinc       822 May 30 09:48 pilotlog.txt
[2026-05-30 09:48:10] -rw-------. 1 boinc boinc    182571 May 30 09:48 log.50533940._005069.job.log.1
[2026-05-30 09:48:10] -rw-------. 1 boinc boinc       357 May 30 09:48 output.list
[2026-05-30 09:48:10] -rw-r--r--. 1 boinc boinc       410 May 30 09:48 runtime_log
[2026-05-30 09:48:10] -rw-------. 1 boinc boinc    542720 May 30 09:48 result.tar.gz
[2026-05-30 09:48:10] -rw-r--r--. 1 boinc boinc      8846 May 30 09:48 runtime_log.err
[2026-05-30 09:48:10] -rw-------. 1 boinc boinc       657 May 30 09:48 3afddf975e6b.diag
[2026-05-30 09:48:10] -rw-r--r--. 1 boinc boinc     20941 May 30 09:48 stderr.txt
[2026-05-30 09:48:10] HITS file was successfully produced:
[2026-05-30 09:48:10] -rw-------. 1 boinc boinc 241537259 May 30 09:47 shared/HITS.pool.root.1
[2026-05-30 09:48:10]  *** Contents of shared directory: ***
[2026-05-30 09:48:10] total 541008
[2026-05-30 09:48:10] -rw-r--r--. 2 boinc boinc 311179239 May 30 09:23 ATLAS.root_0
[2026-05-30 09:48:10] -rw-r--r--. 2 boinc boinc     15667 May 30 09:23 start_atlas.sh
[2026-05-30 09:48:10] -rw-r--r--. 2 boinc boinc    697409 May 30 09:23 input.tar.gz
[2026-05-30 09:48:10] -rw-------. 1 boinc boinc 241537259 May 30 09:47 HITS.pool.root.1
[2026-05-30 09:48:10] -rw-------. 1 boinc boinc    542720 May 30 09:48 result.tar.gz
09:48:11 (3907249): run_atlas exited; CPU time 14787.167696
09:48:11 (3907249): called boinc_finish(0)

</stderr_txt>
]]>

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