Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:10:14 (25035): wrapper (7.7.26015): starting
19:10:14 (25035): wrapper: running run_atlas (--nthreads 8)
[2026-05-30 19:10:14] Arguments: --nthreads 8
[2026-05-30 19:10:14] Threads: 8
[2026-05-30 19:10:14] Checking for CVMFS
[2026-05-30 19:10:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-30 19:10:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-30 19:10:18] Running cvmfs_config stat atlas.cern.ch
[2026-05-30 19:10:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-30 19:10:20] 2.11.2.0 30309 64821 106044 159971 2 53 22512593 25165825 96 130560 0 26941399 99.899 15232440 11426 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-30 19:10:20] CVMFS is ok
[2026-05-30 19:10:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-30 19:10:20] Checking for apptainer binary...
[2026-05-30 19:10:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-30 19:10:20] Running /usr/bin/apptainer --version
[2026-05-30 19:10:20] apptainer version 1.3.2-1.el7
[2026-05-30 19:10:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-30 19:10:36] cg-vwn233.simple-grid.lan
[2026-05-30 19:10:36] apptainer works
[2026-05-30 19:10:36] Set ATHENA_PROC_NUMBER=8
[2026-05-30 19:10:36] Set ATHENA_CORE_NUMBER=8
[2026-05-30 19:10:37] Starting ATLAS job with PandaID=7158136836
[2026-05-30 19:10:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-31 00:48:49]  *** The last 200 lines of the pilot log: ***
[2026-05-31 00:48:49] 2026-05-30 22:47:58,075 | INFO     | this job has now completed (state=finished)
[2026-05-31 00:48:49] 2026-05-30 22:47:58,075 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-31 00:48:49] 2026-05-30 22:47:58,075 | INFO     | log transfer has been attempted: DONE
[2026-05-31 00:48:49] 2026-05-30 22:47:58,075 | INFO     | job 7158136836 has finished - writing final server update
[2026-05-31 00:48:49] 2026-05-30 22:47:58,076 | INFO     | total number of processed events: 400 (read)
[2026-05-31 00:48:49] 2026-05-30 22:47:58,078 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7158136836/memory_monitor_summary.json (trf name=prmon)
[2026-05-31 00:48:49] 2026-05-30 22:47:58,078 | INFO     | extracted standard info from prmon json
[2026-05-31 00:48:49] 2026-05-30 22:47:58,078 | INFO     | extracted standard memory fields from prmon json
[2026-05-31 00:48:49] 2026-05-30 22:47:58,079 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-31 00:48:49] 2026-05-30 22:47:58,079 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-31 00:48:49] 2026-05-30 22:47:58,085 | INFO     | fitting pss+swap vs Time
[2026-05-31 00:48:49] 2026-05-30 22:47:58,086 | INFO     | sum of square deviations: 9971385099.5
[2026-05-31 00:48:49] 2026-05-30 22:47:58,090 | INFO     | sum of deviations: 139233515802.5
[2026-05-31 00:48:49] 2026-05-30 22:47:58,090 | INFO     | mean x (centered): 0.0
[2026-05-31 00:48:49] 2026-05-30 22:47:58,090 | INFO     | mean y: 2505443.393081761
[2026-05-31 00:48:49] 2026-05-30 22:47:58,091 | INFO     | intersect: 2505443.393081761
[2026-05-31 00:48:49] 2026-05-30 22:47:58,091 | INFO     | chi2: 8.697836066511153
[2026-05-31 00:48:49] 2026-05-30 22:47:58,092 | INFO     | sum of square deviations: 9508390372.0
[2026-05-31 00:48:49] 2026-05-30 22:47:58,095 | INFO     | sum of deviations: 158472006079.00006
[2026-05-31 00:48:49] 2026-05-30 22:47:58,095 | INFO     | mean x (centered): 0.0
[2026-05-31 00:48:49] 2026-05-30 22:47:58,096 | INFO     | mean y: 2511689.4760383386
[2026-05-31 00:48:49] 2026-05-30 22:47:58,096 | INFO     | intersect: 2511689.4760383386
[2026-05-31 00:48:49] 2026-05-30 22:47:58,096 | INFO     | chi2: 7.9901528055340405
[2026-05-31 00:48:49] 2026-05-30 22:47:58,096 | INFO     | current chi2=7.9901528055340405 (change=8.136314085084564 %)
[2026-05-31 00:48:49] 2026-05-30 22:47:58,096 | INFO     | right removable region: 312
[2026-05-31 00:48:49] 2026-05-30 22:47:58,097 | INFO     | sum of square deviations: 9508390372.0
[2026-05-31 00:48:49] 2026-05-30 22:47:58,100 | INFO     | sum of deviations: 24932316439.0
[2026-05-31 00:48:49] 2026-05-30 22:47:58,101 | INFO     | mean x (centered): 0.0
[2026-05-31 00:48:49] 2026-05-30 22:47:58,101 | INFO     | mean y: 2543073.827476038
[2026-05-31 00:48:49] 2026-05-30 22:47:58,101 | INFO     | intersect: 2543073.827476038
[2026-05-31 00:48:49] 2026-05-30 22:47:58,101 | INFO     | chi2: 3.7208668610495828
[2026-05-31 00:48:49] 2026-05-30 22:47:58,102 | INFO     | current chi2=3.7208668610495828 (change=57.22077499970536 %)
[2026-05-31 00:48:49] 2026-05-30 22:47:58,102 | INFO     | sum of square deviations: 9059954057.0
[2026-05-31 00:48:49] 2026-05-30 22:47:58,106 | INFO     | sum of deviations: -59405276420.5
[2026-05-31 00:48:49] 2026-05-30 22:47:58,106 | INFO     | mean x (centered): 0.0
[2026-05-31 00:48:49] 2026-05-30 22:47:58,106 | INFO     | mean y: 2571714.1785714286
[2026-05-31 00:48:49] 2026-05-30 22:47:58,106 | INFO     | intersect: 2571714.1785714286
[2026-05-31 00:48:49] 2026-05-30 22:47:58,107 | INFO     | chi2: 1.1118290946764533
[2026-05-31 00:48:49] 2026-05-30 22:47:58,107 | INFO     | current chi2=1.1118290946764533 (change=70.11908417591624 %)
[2026-05-31 00:48:49] 2026-05-30 22:47:58,108 | INFO     | sum of square deviations: 8625843592.0
[2026-05-31 00:48:49] 2026-05-30 22:47:58,111 | INFO     | sum of deviations: -72950517930.0
[2026-05-31 00:48:49] 2026-05-30 22:47:58,111 | INFO     | mean x (centered): 0.0
[2026-05-31 00:48:49] 2026-05-30 22:47:58,111 | INFO     | mean y: 2576448.336633663
[2026-05-31 00:48:49] 2026-05-30 22:47:58,112 | INFO     | intersect: 2576448.336633663
[2026-05-31 00:48:49] 2026-05-30 22:47:58,112 | INFO     | chi2: 0.9999643193839628
[2026-05-31 00:48:49] 2026-05-30 22:47:58,112 | INFO     | current chi2=0.9999643193839628 (change=10.061328294799084 %)
[2026-05-31 00:48:49] 2026-05-30 22:47:58,113 | INFO     | left removable region: 15
[2026-05-31 00:48:49] 2026-05-30 22:47:58,113 | INFO     | sum of square deviations: 8123493708.0
[2026-05-31 00:48:49] 2026-05-30 22:47:58,117 | INFO     | sum of deviations: -51178673954.99997
[2026-05-31 00:48:49] 2026-05-30 22:47:58,117 | INFO     | mean x (centered): 0.0
[2026-05-31 00:48:49] 2026-05-30 22:47:58,117 | INFO     | mean y: 2584254.5656565656
[2026-05-31 00:48:49] 2026-05-30 22:47:58,117 | INFO     | intersect: 2584254.5656565656
[2026-05-31 00:48:49] 2026-05-30 22:47:58,118 | INFO     | chi2: 0.2141392123782874
[2026-05-31 00:48:49] 2026-05-30 22:47:58,118 | INFO     | current memory leak: -6.30 B/s (using 297 data points, chi2=0.21)
[2026-05-31 00:48:49] 2026-05-30 22:47:58,119 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-05-31 00:48:49] 2026-05-30 22:47:58,119 | INFO     | ..............................
[2026-05-31 00:48:49] 2026-05-30 22:47:58,119 | INFO     | . Timing measurements:
[2026-05-31 00:48:49] 2026-05-30 22:47:58,119 | INFO     | . get job = 0 s
[2026-05-31 00:48:49] 2026-05-30 22:47:58,120 | INFO     | . initial setup = 114 s
[2026-05-31 00:48:49] 2026-05-30 22:47:58,120 | INFO     | . payload setup = 313 s
[2026-05-31 00:48:49] 2026-05-30 22:47:58,120 | INFO     | . stage-in = 0 s
[2026-05-31 00:48:49] 2026-05-30 22:47:58,120 | INFO     | . payload execution = 19509 s
[2026-05-31 00:48:49] 2026-05-30 22:47:58,120 | INFO     | . stage-out = 6 s
[2026-05-31 00:48:49] 2026-05-30 22:47:58,120 | INFO     | . log creation = 1 s
[2026-05-31 00:48:49] 2026-05-30 22:47:58,120 | INFO     | ..............................
[2026-05-31 00:48:49] 2026-05-30 22:47:58,256 | INFO     | 
[2026-05-31 00:48:49] 2026-05-30 22:47:58,257 | INFO     | job summary report
[2026-05-31 00:48:49] 2026-05-30 22:47:58,257 | INFO     | --------------------------------------------------
[2026-05-31 00:48:49] 2026-05-30 22:47:58,257 | INFO     | PanDA job id: 7158136836
[2026-05-31 00:48:49] 2026-05-30 22:47:58,257 | INFO     | task id: 50533940
[2026-05-31 00:48:49] 2026-05-30 22:47:58,257 | INFO     | errors: (none)
[2026-05-31 00:48:49] 2026-05-30 22:47:58,257 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-31 00:48:49] 2026-05-30 22:47:58,257 | INFO     | pilot state: finished 
[2026-05-31 00:48:49] 2026-05-30 22:47:58,257 | INFO     | transexitcode: 0
[2026-05-31 00:48:49] 2026-05-30 22:47:58,257 | INFO     | exeerrorcode: 0
[2026-05-31 00:48:49] 2026-05-30 22:47:58,257 | INFO     | exeerrordiag: 
[2026-05-31 00:48:49] 2026-05-30 22:47:58,258 | INFO     | exitcode: 0
[2026-05-31 00:48:49] 2026-05-30 22:47:58,258 | INFO     | exitmsg: OK
[2026-05-31 00:48:49] 2026-05-30 22:47:58,258 | INFO     | cpuconsumptiontime: 74355 s
[2026-05-31 00:48:49] 2026-05-30 22:47:58,258 | INFO     | nevents: 400
[2026-05-31 00:48:49] 2026-05-30 22:47:58,258 | INFO     | neventsw: 0
[2026-05-31 00:48:49] 2026-05-30 22:47:58,258 | INFO     | pid: 1139
[2026-05-31 00:48:49] 2026-05-30 22:47:58,258 | INFO     | pgrp: 1139
[2026-05-31 00:48:49] 2026-05-30 22:47:58,258 | INFO     | corecount: 8
[2026-05-31 00:48:49] 2026-05-30 22:47:58,258 | INFO     | event service: False
[2026-05-31 00:48:49] 2026-05-30 22:47:58,258 | INFO     | sizes: {0: 2265756, 1: 2253092, 2: 2267585, 12: 2267613, 19827: 2300798, 19834: 2309796, 19837: 2309980, 19841: 2310174}
[2026-05-31 00:48:49] 2026-05-30 22:47:58,259 | INFO     | --------------------------------------------------
[2026-05-31 00:48:49] 2026-05-30 22:47:58,259 | INFO     | 
[2026-05-31 00:48:49] 2026-05-30 22:47:58,259 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-05-31 00:48:49] 2026-05-30 22:47:58,996 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-31 00:48:49] 2026-05-30 22:47:58,996 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-31 00:48:49] 2026-05-30 22:47:58,996 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-31 00:48:49] 2026-05-30 22:47:58,997 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-31 00:48:49] 2026-05-30 22:47:58,997 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-31 00:48:49] 2026-05-30 22:47:58,997 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-31 00:48:49] 2026-05-30 22:47:58,997 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-31 00:48:49] 2026-05-30 22:47:58,997 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-31 00:48:49] 2026-05-30 22:47:58,997 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-31 00:48:49] 2026-05-30 22:47:58,997 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-31 00:48:49] 2026-05-30 22:47:58,997 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-31 00:48:49] 2026-05-30 22:47:58,997 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-31 00:48:49] 2026-05-30 22:47:58,998 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-31 00:48:49] 2026-05-30 22:47:58,998 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-31 00:48:49] 2026-05-30 22:47:58,998 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-31 00:48:49] 2026-05-30 22:47:58,998 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-31 00:48:49] 2026-05-30 22:47:58,998 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-31 00:48:49] 2026-05-30 22:47:58,998 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-31 00:48:49] 2026-05-30 22:47:58,998 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-31 00:48:49] 2026-05-30 22:47:58,998 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-31 00:48:49] 2026-05-30 22:47:58,999 | INFO     | job 7158136836 has completed (purged errors)
[2026-05-31 00:48:49] 2026-05-30 22:47:58,999 | INFO     | overall cleanup function is called
[2026-05-31 00:48:49] 2026-05-30 22:48:00,016 | INFO     | --- collectZombieJob: --- 10, [1139]
[2026-05-31 00:48:49] 2026-05-30 22:48:00,017 | INFO     | zombie collector waiting for pid 1139
[2026-05-31 00:48:49] 2026-05-30 22:48:00,017 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-31 00:48:49] 2026-05-30 22:48:00,017 | INFO     | collected zombie processes
[2026-05-31 00:48:49] 2026-05-30 22:48:00,017 | INFO     | will attempt to kill all subprocesses of pid=1139
[2026-05-31 00:48:49] 2026-05-30 22:48:00,081 | INFO     | process IDs to be killed: [1139] (in reverse order)
[2026-05-31 00:48:49] 2026-05-30 22:48:00,993 | WARNING  | found no corresponding commands to process id(s)
[2026-05-31 00:48:49] 2026-05-30 22:48:00,993 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-31 00:48:49] 2026-05-30 22:48:00,996 | INFO     | did not find any defunct processes belonging to 1139
[2026-05-31 00:48:49] 2026-05-30 22:48:00,997 | INFO     | did not find any defunct processes belonging to 1139
[2026-05-31 00:48:49] 2026-05-30 22:48:00,998 | INFO     | Ready for new job
[2026-05-31 00:48:49] 2026-05-30 22:48:01,000 | INFO     | ***************************************
[2026-05-31 00:48:49] 2026-05-30 22:48:01,000 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-31 00:48:49] 2026-05-30 22:48:01,000 | INFO     | ***************************************
[2026-05-31 00:48:49] 2026-05-30 22:48:01,000 | INFO     | 
[2026-05-31 00:48:49] 2026-05-30 22:48:01,006 | INFO     | pilot is running in a VM
[2026-05-31 00:48:49] 2026-05-30 22:48:01,006 | INFO     | architecture information:
[2026-05-31 00:48:49] 2026-05-30 22:48:01,022 | INFO     | executing command: cat /etc/os-release
[2026-05-31 00:48:49] 2026-05-30 22:48:01,241 | INFO     | cat /etc/os-release:
[2026-05-31 00:48:49] NAME="CentOS Linux"
[2026-05-31 00:48:49] VERSION="7 (Core)"
[2026-05-31 00:48:49] ID="centos"
[2026-05-31 00:48:49] ID_LIKE="rhel fedora"
[2026-05-31 00:48:49] VERSION_ID="7"
[2026-05-31 00:48:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-31 00:48:49] ANSI_COLOR="0;31"
[2026-05-31 00:48:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-31 00:48:49] HOME_URL="https://www.centos.org/"
[2026-05-31 00:48:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-31 00:48:49] 
[2026-05-31 00:48:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-31 00:48:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-31 00:48:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-31 00:48:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-31 00:48:49] 
[2026-05-31 00:48:49] 2026-05-30 22:48:01,241 | INFO     | ***************************************
[2026-05-31 00:48:49] 2026-05-30 22:48:01,745 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-05-31 00:48:49] 2026-05-30 22:48:01,968 | INFO     | sufficient remaining disk space (496775462912 B)
[2026-05-31 00:48:49] 2026-05-30 22:48:01,969 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-31 00:48:49] 2026-05-30 22:48:01,969 | INFO     | current server update state: UPDATING_FINAL
[2026-05-31 00:48:49] 2026-05-30 22:48:01,969 | INFO     | update_server=False
[2026-05-31 00:48:49] 2026-05-30 22:48:01,969 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-31 00:48:49] 2026-05-30 22:48:01,972 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-31 00:48:49] 2026-05-30 22:48:02,192 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-31 00:48:49] 2026-05-30 22:48:02,193 | INFO     | aborting loop
[2026-05-31 00:48:49] 2026-05-30 22:48:02,678 | INFO     | all data control threads have been joined
[2026-05-31 00:48:49] 2026-05-30 22:48:02,724 | INFO     | all payload control threads have been joined
[2026-05-31 00:48:49] 2026-05-30 22:48:02,976 | INFO     | [job] retrieve thread has finished
[2026-05-31 00:48:49] 2026-05-30 22:48:03,088 | INFO     | [payload] failed_post thread has finished
[2026-05-31 00:48:49] 2026-05-30 22:48:03,199 | INFO     | [job] job monitor thread has finished
[2026-05-31 00:48:49] 2026-05-30 22:48:03,270 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-31 00:48:49] 2026-05-30 22:48:03,277 | INFO     | [payload] validate_post thread has finished
[2026-05-31 00:48:49] 2026-05-30 22:48:03,378 | INFO     | all job control threads have been joined
[2026-05-31 00:48:49] 2026-05-30 22:48:03,593 | INFO     | [payload] execute_payloads thread has finished
[2026-05-31 00:48:49] 2026-05-30 22:48:03,685 | INFO     | [data] control thread has finished
[2026-05-31 00:48:49] 2026-05-30 22:48:03,730 | INFO     | [payload] control thread has finished
[2026-05-31 00:48:49] 2026-05-30 22:48:03,765 | INFO     | [job] validate thread has finished
[2026-05-31 00:48:49] 2026-05-30 22:48:03,966 | INFO     | [payload] validate_pre thread has finished
[2026-05-31 00:48:49] 2026-05-30 22:48:03,979 | INFO     | [data] copytool_out thread has finished
[2026-05-31 00:48:49] 2026-05-30 22:48:04,169 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-31 00:48:49] 2026-05-30 22:48:04,276 | INFO     | [job] queue monitor thread has finished
[2026-05-31 00:48:49] 2026-05-30 22:48:04,323 | INFO     | [data] copytool_in thread has finished
[2026-05-31 00:48:49] 2026-05-30 22:48:04,376 | INFO     | [job] create_data_payload thread has finished
[2026-05-31 00:48:49] 2026-05-30 22:48:04,384 | INFO     | [job] control thread has finished
[2026-05-31 00:48:49] 2026-05-30 22:48:04,883 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-31 00:48:49] 2026-05-30 22:48:08,892 | INFO     | [data] queue_monitor thread has finished
[2026-05-31 00:48:49] 2026-05-30 22:48:31,143 | INFO     | PID=29038 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-31 00:48:49] 2026-05-30 22:48:31,143 | INFO     | .. there are 2 such processes running
[2026-05-31 00:48:49] 2026-05-30 22:48:31,151 | INFO     | found 0 job(s) in 20 queues
[2026-05-31 00:48:49] 2026-05-30 22:48:31,151 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-31 00:48:49] 2026-05-30 22:48:31,152 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-31 00:48:49] 2026-05-30 22:48:38,482 | INFO     | [monitor] cgroup control has ended
[2026-05-31 00:48:49] 2026-05-30 22:48:38,530 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140708511119168)>', '<ExcThread(monitor, started 140708044314368)>']
[2026-05-31 00:48:49] 2026-05-30 22:48:39,199 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-31 00:48:49] 2026-05-30 22:48:39,200 | INFO     | [monitor] control thread has ended
[2026-05-31 00:48:49] 2026-05-30 22:48:43,556 | INFO     | all workflow threads have been joined
[2026-05-31 00:48:49] 2026-05-30 22:48:43,557 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-31 00:48:49] 2026-05-30 22:48:43,557 | INFO     | traces error code: 0
[2026-05-31 00:48:49] 2026-05-30 22:48:43,557 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-31 00:48:49] 2026-05-30 22:48:43,976 [wrapper] ==== pilot stdout END ====
[2026-05-31 00:48:49] 2026-05-30 22:48:44,071 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-31 00:48:49] 2026-05-30 22:48:44,156 [wrapper] pilotpid: 29038
[2026-05-31 00:48:49] 2026-05-30 22:48:44,273 [wrapper] Pilot exit status: 0
[2026-05-31 00:48:49] 2026-05-30 22:48:44,819 [wrapper] pandaids: 7158136836
[2026-05-31 00:48:49] 2026-05-30 22:48:45,842 [wrapper] cleanup supervisor_pilot  8663 29039
[2026-05-31 00:48:49] 2026-05-30 22:48:45,948 [wrapper] Test setup, not cleaning
[2026-05-31 00:48:49] 2026-05-30 22:48:46,075 [wrapper] apfmon messages muted
[2026-05-31 00:48:49] 2026-05-30 22:48:46,186 [wrapper] ==== wrapper stdout END ====
[2026-05-31 00:48:49] 2026-05-30 22:48:46,303 [wrapper] ==== wrapper stderr END ====
[2026-05-31 00:48:49]  *** Error codes and diagnostics ***
[2026-05-31 00:48:49]     "exeErrorCode": 0,
[2026-05-31 00:48:49]     "pilotErrorCode": 0,
[2026-05-31 00:48:49]  *** Listing of results directory ***
[2026-05-31 00:48:49] total 554452
[2026-05-31 00:48:49] -rw-r--r--. 1 boinc boinc      5631 May 30 05:46 queuedata.json
[2026-05-31 00:48:49] -rw-r--r--. 1 boinc boinc    683926 May 30 05:46 pilot3.tar.gz
[2026-05-31 00:48:49] -rwx------. 1 boinc boinc     36281 May 30 05:47 runpilot2-wrapper.sh
[2026-05-31 00:48:49] -rw-r--r--. 1 boinc boinc       100 May 30 19:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-31 00:48:49] -rwxr-xr-x. 1 boinc boinc      7986 May 30 19:10 run_atlas
[2026-05-31 00:48:49] -rw-r--r--. 1 boinc boinc       105 May 30 19:10 job.xml
[2026-05-31 00:48:49] -rw-r--r--. 2 boinc boinc 312145736 May 30 19:10 EVNT.50532940._000285.pool.root.1
[2026-05-31 00:48:49] -rw-r--r--. 1 boinc boinc      6306 May 30 19:10 init_data.xml
[2026-05-31 00:48:49] -rw-r--r--. 2 boinc boinc     15667 May 30 19:10 start_atlas.sh
[2026-05-31 00:48:49] drwxrwx--x. 2 boinc boinc        68 May 30 19:10 shared
[2026-05-31 00:48:49] -rw-r--r--. 2 boinc boinc    697410 May 30 19:10 input.tar.gz
[2026-05-31 00:48:49] -rw-r--r--. 1 boinc boinc         0 May 30 19:10 boinc_lockfile
[2026-05-31 00:48:49] -rw-r--r--. 1 boinc boinc      2512 May 30 19:10 pandaJob.out
[2026-05-31 00:48:49] -rw-------. 1 boinc boinc       415 May 30 19:17 workernode_map.json
[2026-05-31 00:48:49] -rw-------. 1 boinc boinc    995580 May 30 19:17 agis_schedconf.cvmfs.json
[2026-05-31 00:48:49] drwx------. 5 boinc boinc      4096 May 30 19:17 pilot3
[2026-05-31 00:48:49] -rw-------. 1 boinc boinc 246989314 May 31 00:46 HITS.50533940._005836.pool.root.1
[2026-05-31 00:48:49] -rw-r--r--. 1 boinc boinc       489 May 31 00:46 boinc_task_state.xml
[2026-05-31 00:48:49] -rw-------. 1 boinc boinc      1012 May 31 00:47 memory_monitor_summary.json
[2026-05-31 00:48:49] -rw-------. 1 boinc boinc   1502789 May 31 00:47 agis_ddmendpoints.agis.ALL.json
[2026-05-31 00:48:49] -rw-------. 1 boinc boinc    438362 May 31 00:47 log.50533940._005836.job.log.tgz.1
[2026-05-31 00:48:49] -rw-------. 1 boinc boinc      6338 May 31 00:47 heartbeat_new.json
[2026-05-31 00:48:49] -rw-------. 1 boinc boinc      6229 May 31 00:47 heartbeat.json
[2026-05-31 00:48:49] -rw-------. 1 boinc boinc        95 May 31 00:48 pilot_heartbeat.json
[2026-05-31 00:48:49] -rw-r--r--. 1 boinc boinc        28 May 31 00:48 wrapper_checkpoint.txt
[2026-05-31 00:48:49] -rw-r--r--. 1 boinc boinc      8192 May 31 00:48 boinc_mmap_file
[2026-05-31 00:48:49] -rw-------. 1 boinc boinc      4883 May 31 00:48 pilotlog.txt
[2026-05-31 00:48:49] -rw-------. 1 boinc boinc   1818513 May 31 00:48 log.50533940._005836.job.log.1
[2026-05-31 00:48:49] -rw-------. 1 boinc boinc       357 May 31 00:48 output.list
[2026-05-31 00:48:49] -rw-r--r--. 1 boinc boinc       410 May 31 00:48 runtime_log
[2026-05-31 00:48:49] -rw-------. 1 boinc boinc   2273280 May 31 00:48 result.tar.gz
[2026-05-31 00:48:49] -rw-r--r--. 1 boinc boinc      8439 May 31 00:48 runtime_log.err
[2026-05-31 00:48:49] -rw-------. 1 boinc boinc       656 May 31 00:48 5dbf0883b723.diag
[2026-05-31 00:48:49] -rw-r--r--. 1 boinc boinc     20629 May 31 00:48 stderr.txt
[2026-05-31 00:48:49] HITS file was successfully produced:
[2026-05-31 00:48:49] -rw-------. 1 boinc boinc 246989314 May 31 00:46 shared/HITS.pool.root.1
[2026-05-31 00:48:49]  *** Contents of shared directory: ***
[2026-05-31 00:48:49] total 548956
[2026-05-31 00:48:49] -rw-r--r--. 2 boinc boinc 312145736 May 30 19:10 ATLAS.root_0
[2026-05-31 00:48:49] -rw-r--r--. 2 boinc boinc     15667 May 30 19:10 start_atlas.sh
[2026-05-31 00:48:49] -rw-r--r--. 2 boinc boinc    697410 May 30 19:10 input.tar.gz
[2026-05-31 00:48:49] -rw-------. 1 boinc boinc 246989314 May 31 00:46 HITS.pool.root.1
[2026-05-31 00:48:49] -rw-------. 1 boinc boinc   2273280 May 31 00:48 result.tar.gz
00:48:51 (25035): run_atlas exited; CPU time 74549.238236
00:48:51 (25035): called boinc_finish(0)

</stderr_txt>
]]>

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