Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:11:38 (2726098): wrapper (7.7.26015): starting
05:11:38 (2726098): wrapper: running run_atlas (--nthreads 12)
[2026-05-30 05:11:38] Arguments: --nthreads 12
[2026-05-30 05:11:38] Threads: 12
[2026-05-30 05:11:38] Checking for CVMFS
[2026-05-30 05:11:38] No cvmfs_config command found, will try listing directly
[2026-05-30 05:11:38] CVMFS is ok
[2026-05-30 05:11:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-30 05:11:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-30 05:11:38] Further information can be found at the LHC@home message board.
[2026-05-30 05:11:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-30 05:11:38] Checking for apptainer binary...
[2026-05-30 05:11:38] which: no apptainer in ((null))
[2026-05-30 05:11:38] apptainer is not installed, using version from CVMFS
[2026-05-30 05:11:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-30 05:11:38] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot156/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-05-30 05:11:38] apptainer works
[2026-05-30 05:11:38] Set ATHENA_PROC_NUMBER=12
[2026-05-30 05:11:38] Set ATHENA_CORE_NUMBER=12
[2026-05-30 05:11:38] Starting ATLAS job with PandaID=7157729670
[2026-05-30 05:11:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot156/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-30 05:39:07]  *** The last 200 lines of the pilot log: ***
[2026-05-30 05:39:07]  filetype=log
[2026-05-30 05:39:07]  guid=c3eef52d-20a9-45f8-b626-504a239a9ea8
[2026-05-30 05:39:07]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-05-30 05:39:07]  is_altstaged=None
[2026-05-30 05:39:07]  is_tar=False
[2026-05-30 05:39:07]  lfn=log.50533940._002752.job.log.tgz.1
[2026-05-30 05:39:07]  mtime=0
[2026-05-30 05:39:07]  protocol_id=None
[2026-05-30 05:39:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-05-30 05:39:07]  replicas=None
[2026-05-30 05:39:07]  scope=mc23_13p6TeV
[2026-05-30 05:39:07]  status=None
[2026-05-30 05:39:07]  status_code=0
[2026-05-30 05:39:07]  storage_token=
[2026-05-30 05:39:07]  surl=/var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7157729670/log.50533940._002752.job.log.tgz.1
[2026-05-30 05:39:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/26/e0/log.50533940._002752.job.log.tgz.1
[2026-05-30 05:39:07]  workdir=None
[2026-05-30 05:39:07] ]
[2026-05-30 05:39:07] 2026-05-30 03:37:47,116 | INFO     | transferring file log.50533940._002752.job.log.tgz.1 from /var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7157729670/log.50533940._002752.job.log.tgz.1 to /var/lib/
[2026-05-30 05:39:07] 2026-05-30 03:37:47,116 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7157729670/log.50533940._002752.job.log.tgz.1 /var/lib/boinc/var/slot156/slots/1/
[2026-05-30 05:39:07] 2026-05-30 03:37:47,128 | INFO     | adding to output.list: log.50533940._002752.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/26/e0/log.50533940._002752.job.log.tg
[2026-05-30 05:39:07] 2026-05-30 03:37:47,128 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-05-30 05:39:07] 2026-05-30 03:37:47,128 | INFO     | summary of transferred files:
[2026-05-30 05:39:07] 2026-05-30 03:37:47,128 | INFO     |  -- lfn=log.50533940._002752.job.log.tgz.1, status_code=0, status=transferred
[2026-05-30 05:39:07] 2026-05-30 03:37:47,128 | INFO     | stage-out finished correctly
[2026-05-30 05:39:07] 2026-05-30 03:37:47,155 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-30 05:39:07] 2026-05-30 03:37:47,195 | INFO     | job 7157729670 has state=finished
[2026-05-30 05:39:07] 2026-05-30 03:37:47,195 | INFO     | preparing for final server update for job 7157729670 in state='finished'
[2026-05-30 05:39:07] 2026-05-30 03:37:47,196 | INFO     | reading metadata from: /var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7157729670/jobReport.json
[2026-05-30 05:39:07] 2026-05-30 03:37:47,197 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot156/slots/1/workernode_map.json
[2026-05-30 05:39:07] 2026-05-30 03:37:47,197 | INFO     | this job has now completed (state=finished)
[2026-05-30 05:39:07] 2026-05-30 03:37:47,197 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-30 05:39:07] 2026-05-30 03:37:47,197 | INFO     | log transfer has been attempted: DONE
[2026-05-30 05:39:07] 2026-05-30 03:37:47,197 | INFO     | job 7157729670 has finished - writing final server update
[2026-05-30 05:39:07] 2026-05-30 03:37:47,197 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1676477/.job.ad'
[2026-05-30 05:39:07] 2026-05-30 03:37:47,198 | INFO     | total number of processed events: 400 (read)
[2026-05-30 05:39:07] 2026-05-30 03:37:47,213 | INFO     | using path: /var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7157729670/memory_monitor_summary.json (trf name=prmon)
[2026-05-30 05:39:07] 2026-05-30 03:37:47,214 | INFO     | extracted standard info from prmon json
[2026-05-30 05:39:07] 2026-05-30 03:37:47,214 | INFO     | extracted standard memory fields from prmon json
[2026-05-30 05:39:07] 2026-05-30 03:37:47,214 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-30 05:39:07] 2026-05-30 03:37:47,214 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-30 05:39:07] 2026-05-30 03:37:47,214 | INFO     | fitting pss+swap vs Time
[2026-05-30 05:39:07] 2026-05-30 03:37:47,214 | INFO     | sum of square deviations: 2120970.0
[2026-05-30 05:39:07] 2026-05-30 03:37:47,215 | INFO     | sum of deviations: 23056779.999999996
[2026-05-30 05:39:07] 2026-05-30 03:37:47,215 | INFO     | mean x (centered): 0.0
[2026-05-30 05:39:07] 2026-05-30 03:37:47,215 | INFO     | mean y: 2765786.052631579
[2026-05-30 05:39:07] 2026-05-30 03:37:47,215 | INFO     | intersect: 2765786.052631579
[2026-05-30 05:39:07] 2026-05-30 03:37:47,215 | INFO     | chi2: 9.3329735422337e-05
[2026-05-30 05:39:07] 2026-05-30 03:37:47,215 | INFO     | current memory leak: 10.87 B/s (using 19 data points, chi2=0.00)
[2026-05-30 05:39:07] 2026-05-30 03:37:47,215 | INFO     | could have reported an average CPU frequency of 3667 MHz (4 samples)
[2026-05-30 05:39:07] 2026-05-30 03:37:47,215 | INFO     | ..............................
[2026-05-30 05:39:07] 2026-05-30 03:37:47,215 | INFO     | . Timing measurements:
[2026-05-30 05:39:07] 2026-05-30 03:37:47,215 | INFO     | . get job = 0 s
[2026-05-30 05:39:07] 2026-05-30 03:37:47,216 | INFO     | . initial setup = 3 s
[2026-05-30 05:39:07] 2026-05-30 03:37:47,216 | INFO     | . payload setup = 4 s
[2026-05-30 05:39:07] 2026-05-30 03:37:47,216 | INFO     | . stage-in = 0 s
[2026-05-30 05:39:07] 2026-05-30 03:37:47,216 | INFO     | . payload execution = 1541 s
[2026-05-30 05:39:07] 2026-05-30 03:37:47,216 | INFO     | . stage-out = 0 s
[2026-05-30 05:39:07] 2026-05-30 03:37:47,216 | INFO     | . log creation = 0 s
[2026-05-30 05:39:07] 2026-05-30 03:37:47,216 | INFO     | ..............................
[2026-05-30 05:39:07] 2026-05-30 03:37:47,257 | INFO     | 
[2026-05-30 05:39:07] 2026-05-30 03:37:47,258 | INFO     | job summary report
[2026-05-30 05:39:07] 2026-05-30 03:37:47,258 | INFO     | --------------------------------------------------
[2026-05-30 05:39:07] 2026-05-30 03:37:47,258 | INFO     | PanDA job id: 7157729670
[2026-05-30 05:39:07] 2026-05-30 03:37:47,258 | INFO     | task id: 50533940
[2026-05-30 05:39:07] 2026-05-30 03:37:47,258 | INFO     | errors: (none)
[2026-05-30 05:39:07] 2026-05-30 03:37:47,258 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-30 05:39:07] 2026-05-30 03:37:47,258 | INFO     | pilot state: finished 
[2026-05-30 05:39:07] 2026-05-30 03:37:47,258 | INFO     | transexitcode: 0
[2026-05-30 05:39:07] 2026-05-30 03:37:47,258 | INFO     | exeerrorcode: 0
[2026-05-30 05:39:07] 2026-05-30 03:37:47,258 | INFO     | exeerrordiag: 
[2026-05-30 05:39:07] 2026-05-30 03:37:47,258 | INFO     | exitcode: 0
[2026-05-30 05:39:07] 2026-05-30 03:37:47,258 | INFO     | exitmsg: OK
[2026-05-30 05:39:07] 2026-05-30 03:37:47,258 | INFO     | cpuconsumptiontime: 16619 s
[2026-05-30 05:39:07] 2026-05-30 03:37:47,258 | INFO     | nevents: 400
[2026-05-30 05:39:07] 2026-05-30 03:37:47,258 | INFO     | neventsw: 0
[2026-05-30 05:39:07] 2026-05-30 03:37:47,258 | INFO     | pid: 2736524
[2026-05-30 05:39:07] 2026-05-30 03:37:47,258 | INFO     | pgrp: 2736524
[2026-05-30 05:39:07] 2026-05-30 03:37:47,258 | INFO     | corecount: 12
[2026-05-30 05:39:07] 2026-05-30 03:37:47,258 | INFO     | event service: False
[2026-05-30 05:39:07] 2026-05-30 03:37:47,258 | INFO     | sizes: {0: 2265940, 1: 2267570, 11: 2267598, 1549: 2292395, 1550: 2301611}
[2026-05-30 05:39:07] 2026-05-30 03:37:47,258 | INFO     | --------------------------------------------------
[2026-05-30 05:39:07] 2026-05-30 03:37:47,258 | INFO     | 
[2026-05-30 05:39:07] 2026-05-30 03:37:47,258 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot156/slots/1
[2026-05-30 05:39:07] 2026-05-30 03:37:47,273 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-30 05:39:07] 2026-05-30 03:37:47,273 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-30 05:39:07] 2026-05-30 03:37:47,273 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-30 05:39:07] 2026-05-30 03:37:47,273 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-30 05:39:07] 2026-05-30 03:37:47,273 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-30 05:39:07] 2026-05-30 03:37:47,273 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-30 05:39:07] 2026-05-30 03:37:47,273 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-30 05:39:07] 2026-05-30 03:37:47,274 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-30 05:39:07] 2026-05-30 03:37:47,274 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-30 05:39:07] 2026-05-30 03:37:47,274 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-30 05:39:07] 2026-05-30 03:37:47,274 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-30 05:39:07] 2026-05-30 03:37:47,274 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-30 05:39:07] 2026-05-30 03:37:47,274 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-30 05:39:07] 2026-05-30 03:37:47,274 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-30 05:39:07] 2026-05-30 03:37:47,274 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-30 05:39:07] 2026-05-30 03:37:47,274 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-30 05:39:07] 2026-05-30 03:37:47,274 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-30 05:39:07] 2026-05-30 03:37:47,274 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-30 05:39:07] 2026-05-30 03:37:47,274 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-30 05:39:07] 2026-05-30 03:37:47,274 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-30 05:39:07] 2026-05-30 03:37:47,274 | INFO     | job 7157729670 has completed (purged errors)
[2026-05-30 05:39:07] 2026-05-30 03:37:47,274 | INFO     | overall cleanup function is called
[2026-05-30 05:39:07] 2026-05-30 03:37:48,281 | INFO     | --- collectZombieJob: --- 10, [2736524]
[2026-05-30 05:39:07] 2026-05-30 03:37:48,281 | INFO     | zombie collector waiting for pid 2736524
[2026-05-30 05:39:07] 2026-05-30 03:37:48,281 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-30 05:39:07] 2026-05-30 03:37:48,281 | INFO     | collected zombie processes
[2026-05-30 05:39:07] 2026-05-30 03:37:48,281 | INFO     | will attempt to kill all subprocesses of pid=2736524
[2026-05-30 05:39:07] 2026-05-30 03:37:48,754 | WARNING  | process 2736524 can no longer be monitored (due to stat problems) - aborting
[2026-05-30 05:39:07] 2026-05-30 03:37:49,001 | INFO     | process IDs to be killed: [2736524] (in reverse order)
[2026-05-30 05:39:07] 2026-05-30 03:37:49,082 | INFO     | using path: /var/lib/boinc/var/slot156/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-05-30 05:39:07] 2026-05-30 03:37:49,116 | WARNING  | found no corresponding commands to process id(s)
[2026-05-30 05:39:07] 2026-05-30 03:37:49,116 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-30 05:39:07] 2026-05-30 03:37:49,196 | INFO     | did not find any defunct processes belonging to 2736524
[2026-05-30 05:39:07] 2026-05-30 03:37:49,247 | INFO     | did not find any defunct processes belonging to 2736524
[2026-05-30 05:39:07] 2026-05-30 03:37:49,247 | INFO     | Ready for new job
[2026-05-30 05:39:07] 2026-05-30 03:37:49,248 | INFO     | ***************************************
[2026-05-30 05:39:07] 2026-05-30 03:37:49,248 | INFO     | ***  PanDA Pilot version 3.13.1.30  ***
[2026-05-30 05:39:07] 2026-05-30 03:37:49,248 | INFO     | ***************************************
[2026-05-30 05:39:07] 2026-05-30 03:37:49,248 | INFO     | 
[2026-05-30 05:39:07] 2026-05-30 03:37:49,253 | INFO     | architecture information:
[2026-05-30 05:39:07] 2026-05-30 03:37:49,254 | INFO     | executing command: cat /etc/os-release
[2026-05-30 05:39:07] 2026-05-30 03:37:49,264 | INFO     | cat /etc/os-release:
[2026-05-30 05:39:07] NAME="CentOS Linux"
[2026-05-30 05:39:07] VERSION="7 (Core)"
[2026-05-30 05:39:07] ID="centos"
[2026-05-30 05:39:07] ID_LIKE="rhel fedora"
[2026-05-30 05:39:07] VERSION_ID="7"
[2026-05-30 05:39:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-30 05:39:07] ANSI_COLOR="0;31"
[2026-05-30 05:39:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-30 05:39:07] HOME_URL="https://www.centos.org/"
[2026-05-30 05:39:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-30 05:39:07] 
[2026-05-30 05:39:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-30 05:39:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-30 05:39:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-30 05:39:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-30 05:39:07] 
[2026-05-30 05:39:07] 2026-05-30 03:37:49,265 | INFO     | ***************************************
[2026-05-30 05:39:07] 2026-05-30 03:37:49,359 | INFO     | number of running child processes to parent process 2736524: 1
[2026-05-30 05:39:07] 2026-05-30 03:37:49,360 | INFO     | maximum number of monitored processes: 6
[2026-05-30 05:39:07] 2026-05-30 03:37:49,360 | INFO     | aborting job monitoring since job object (job id=7157729670) has expired
[2026-05-30 05:39:07] 2026-05-30 03:37:49,767 | INFO     | executing command: df -mP /var/lib/boinc/var/slot156/slots/1
[2026-05-30 05:39:07] 2026-05-30 03:37:49,779 | INFO     | sufficient remaining disk space (330409443328 B)
[2026-05-30 05:39:07] 2026-05-30 03:37:49,779 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-30 05:39:07] 2026-05-30 03:37:49,779 | INFO     | current server update state: UPDATING_FINAL
[2026-05-30 05:39:07] 2026-05-30 03:37:49,779 | INFO     | update_server=False
[2026-05-30 05:39:07] 2026-05-30 03:37:49,779 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-30 05:39:07] 2026-05-30 03:37:49,779 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-30 05:39:07] 2026-05-30 03:37:49,780 | INFO     | will abort loop
[2026-05-30 05:39:07] 2026-05-30 03:37:50,061 | INFO     | all data control threads have been joined
[2026-05-30 05:39:07] 2026-05-30 03:37:50,161 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-30 05:39:07] 2026-05-30 03:37:50,710 | INFO     | all payload control threads have been joined
[2026-05-30 05:39:07] 2026-05-30 03:37:50,784 | INFO     | [job] retrieve thread has finished
[2026-05-30 05:39:07] 2026-05-30 03:37:50,785 | INFO     | [job] job monitor thread has finished
[2026-05-30 05:39:07] 2026-05-30 03:37:51,061 | INFO     | [data] control thread has finished
[2026-05-30 05:39:07] 2026-05-30 03:37:51,367 | INFO     | all job control threads have been joined
[2026-05-30 05:39:07] 2026-05-30 03:37:51,587 | INFO     | [payload] execute_payloads thread has finished
[2026-05-30 05:39:07] 2026-05-30 03:37:51,663 | INFO     | [payload] failed_post thread has finished
[2026-05-30 05:39:07] 2026-05-30 03:37:51,715 | INFO     | [payload] control thread has finished
[2026-05-30 05:39:07] 2026-05-30 03:37:51,811 | INFO     | [job] validate thread has finished
[2026-05-30 05:39:07] 2026-05-30 03:37:51,917 | INFO     | [job] create_data_payload thread has finished
[2026-05-30 05:39:07] 2026-05-30 03:37:51,943 | INFO     | [payload] validate_pre thread has finished
[2026-05-30 05:39:07] 2026-05-30 03:37:52,101 | INFO     | [data] copytool_in thread has finished
[2026-05-30 05:39:07] 2026-05-30 03:37:52,166 | INFO     | [data] copytool_out thread has finished
[2026-05-30 05:39:07] 2026-05-30 03:37:52,204 | INFO     | [payload] validate_post thread has finished
[2026-05-30 05:39:07] 2026-05-30 03:37:52,268 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-30 05:39:07] 2026-05-30 03:37:52,372 | INFO     | [job] control thread has finished
[2026-05-30 05:39:07] 2026-05-30 03:37:53,201 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-30 05:39:07] 2026-05-30 03:37:53,273 | INFO     | [job] queue monitor thread has finished
[2026-05-30 05:39:07] 2026-05-30 03:37:57,207 | INFO     | [data] queue_monitor thread has finished
[2026-05-30 05:39:07] 2026-05-30 03:38:00,570 | INFO     | job.realtimelogging is not enabled
[2026-05-30 05:39:07] 2026-05-30 03:38:01,575 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-30 05:39:07] 2026-05-30 03:38:19,969 | INFO     | PID=2730655 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-30 05:39:07] 2026-05-30 03:38:19,969 | INFO     | .. there are 4 such processes running
[2026-05-30 05:39:07] 2026-05-30 03:38:19,970 | INFO     | found 0 job(s) in 20 queues
[2026-05-30 05:39:07] 2026-05-30 03:38:19,970 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-30 05:39:07] 2026-05-30 03:38:19,970 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-30 05:39:07] 2026-05-30 03:38:47,852 | INFO     | [monitor] cgroup control has ended
[2026-05-30 05:39:07] 2026-05-30 03:38:48,912 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23091057088320)>', '<ExcThread(monitor, started 23090748712704)>']
[2026-05-30 05:39:07] 2026-05-30 03:38:49,108 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-30 05:39:07] 2026-05-30 03:38:49,108 | INFO     | [monitor] control thread has ended
[2026-05-30 05:39:07] 2026-05-30 03:38:53,935 | INFO     | all workflow threads have been joined
[2026-05-30 05:39:07] 2026-05-30 03:38:53,935 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-30 05:39:07] 2026-05-30 03:38:53,935 | INFO     | traces error code: 0
[2026-05-30 05:39:07] 2026-05-30 03:38:53,935 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-30 05:39:07] 2026-05-30 03:38:54,037 [wrapper] ==== pilot stdout END ====
[2026-05-30 05:39:07] 2026-05-30 03:38:54,042 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-30 05:39:07] 2026-05-30 03:38:54,043 [wrapper] pilotpid: 2730655
[2026-05-30 05:39:07] 2026-05-30 03:38:54,044 [wrapper] Pilot exit status: 0
[2026-05-30 05:39:07] 2026-05-30 03:38:54,049 [wrapper] pandaids: 7157729670
[2026-05-30 05:39:07] 2026-05-30 03:38:54,141 [wrapper] cleanup supervisor_pilot 2780677 2730656
[2026-05-30 05:39:07] 2026-05-30 03:38:54,142 [wrapper] Test setup, not cleaning
[2026-05-30 05:39:07] 2026-05-30 03:38:54,143 [wrapper] apfmon messages muted
[2026-05-30 05:39:07] 2026-05-30 03:38:54,144 [wrapper] ==== wrapper stdout END ====
[2026-05-30 05:39:07] 2026-05-30 03:38:54,145 [wrapper] ==== wrapper stderr END ====
[2026-05-30 05:39:07]  *** Error codes and diagnostics ***
[2026-05-30 05:39:07]     "exeErrorCode": 0,
[2026-05-30 05:39:07]     "pilotErrorCode": 0,
[2026-05-30 05:39:07]  *** Listing of results directory ***
[2026-05-30 05:39:07] total 543956
[2026-05-30 05:39:07] -rw-r--r--. 1 boinc boinc    715034 May 21 17:55 pilot3.tar.gz
[2026-05-30 05:39:07] -rw-r--r--. 1 boinc boinc      5631 May 29 22:17 queuedata.json
[2026-05-30 05:39:07] -rwx------. 1 boinc boinc     36281 May 29 22:17 runpilot2-wrapper.sh
[2026-05-30 05:39:07] -rw-r--r--. 1 boinc boinc       100 May 30 05:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-30 05:39:07] -rwxr-xr-x. 1 boinc boinc      7986 May 30 05:11 run_atlas
[2026-05-30 05:39:07] -rw-r--r--. 1 boinc boinc       105 May 30 05:11 job.xml
[2026-05-30 05:39:07] -rw-r--r--. 1 boinc boinc      6630 May 30 05:11 init_data.xml
[2026-05-30 05:39:07] -rw-r--r--. 2 boinc boinc 309302397 May 30 05:11 EVNT.50532940._000161.pool.root.1
[2026-05-30 05:39:07] -rw-r--r--. 2 boinc boinc     15667 May 30 05:11 start_atlas.sh
[2026-05-30 05:39:07] drwxrwx--x. 2 boinc boinc      4096 May 30 05:11 shared
[2026-05-30 05:39:07] -rw-r--r--. 2 boinc boinc    728917 May 30 05:11 input.tar.gz
[2026-05-30 05:39:07] -rw-r--r--. 1 boinc boinc         0 May 30 05:11 boinc_lockfile
[2026-05-30 05:39:07] -rw-r--r--. 1 boinc boinc      2512 May 30 05:11 pandaJob.out
[2026-05-30 05:39:07] -rw-------. 1 boinc boinc    995579 May 30 05:11 agis_schedconf.cvmfs.json
[2026-05-30 05:39:07] -rw-------. 1 boinc boinc         0 May 30 05:11 agis_ddmendpoints.agis.ALL.json
[2026-05-30 05:39:07] -rw-------. 1 boinc boinc   1251485 May 30 05:11 cric_ddmendpoints.json
[2026-05-30 05:39:07] -rw-------. 1 boinc boinc       445 May 30 05:11 workernode_map.json
[2026-05-30 05:39:07] drwx------. 5 boinc boinc      4096 May 30 05:11 pilot3
[2026-05-30 05:39:07] -rw-------. 1 boinc boinc 242738776 May 30 05:37 HITS.50533940._002752.pool.root.1
[2026-05-30 05:39:07] -rw-r--r--. 1 boinc boinc       486 May 30 05:37 boinc_task_state.xml
[2026-05-30 05:39:07] -rw-------. 1 boinc boinc      1029 May 30 05:37 memory_monitor_summary.json
[2026-05-30 05:39:07] -rw-------. 1 boinc boinc    318437 May 30 05:37 log.50533940._002752.job.log.tgz.1
[2026-05-30 05:39:07] -rw-------. 1 boinc boinc      6422 May 30 05:37 heartbeat_new.json
[2026-05-30 05:39:07] -rw-------. 1 boinc boinc      6313 May 30 05:37 heartbeat.json
[2026-05-30 05:39:07] -rw-------. 1 boinc boinc        95 May 30 05:38 pilot_heartbeat.json
[2026-05-30 05:39:07] -rw-------. 1 boinc boinc      5195 May 30 05:38 pilotlog.txt
[2026-05-30 05:39:07] -rw-------. 1 boinc boinc    196850 May 30 05:38 log.50533940._002752.job.log.1
[2026-05-30 05:39:07] -rw-------. 1 boinc boinc       357 May 30 05:38 output.list
[2026-05-30 05:39:07] -rw-r--r--. 1 boinc boinc       410 May 30 05:38 runtime_log
[2026-05-30 05:39:07] -rw-------. 1 boinc boinc    532480 May 30 05:38 result.tar.gz
[2026-05-30 05:39:07] -rw-r--r--. 1 boinc boinc      8846 May 30 05:38 runtime_log.err
[2026-05-30 05:39:07] -rw-------. 1 boinc boinc       659 May 30 05:38 f46f9a1c5e6a.diag
[2026-05-30 05:39:07] -rw-r--r--. 1 boinc boinc        26 May 30 05:39 wrapper_checkpoint.txt
[2026-05-30 05:39:07] -rw-r--r--. 1 boinc boinc      8192 May 30 05:39 boinc_mmap_file
[2026-05-30 05:39:07] -rw-r--r--. 1 boinc boinc     21095 May 30 05:39 stderr.txt
[2026-05-30 05:39:07] HITS file was successfully produced:
[2026-05-30 05:39:07] -rw-------. 1 boinc boinc 242738776 May 30 05:37 shared/HITS.pool.root.1
[2026-05-30 05:39:07]  *** Contents of shared directory: ***
[2026-05-30 05:39:07] total 540364
[2026-05-30 05:39:07] -rw-r--r--. 2 boinc boinc 309302397 May 30 05:11 ATLAS.root_0
[2026-05-30 05:39:07] -rw-r--r--. 2 boinc boinc     15667 May 30 05:11 start_atlas.sh
[2026-05-30 05:39:07] -rw-r--r--. 2 boinc boinc    728917 May 30 05:11 input.tar.gz
[2026-05-30 05:39:07] -rw-------. 1 boinc boinc 242738776 May 30 05:37 HITS.pool.root.1
[2026-05-30 05:39:07] -rw-------. 1 boinc boinc    532480 May 30 05:38 result.tar.gz
05:39:08 (2726098): run_atlas exited; CPU time 16649.659340
05:39:08 (2726098): called boinc_finish(0)

</stderr_txt>
]]>

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