Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
2026-05-30 00:57:52 (6616): vboxwrapper version 26210
2026-05-30 00:57:52 (6616): BOINC client version: 8.2.9
2026-05-30 00:57:53 (6616): Detected: VirtualBox VboxManage Interface (Version: 7.2.8)
2026-05-30 00:57:53 (6616): Successfully copied 'init_data.xml' to the shared directory.
2026-05-30 00:57:53 (6616): Create VM. (boinc_413cdc11d7af64fb, slot#0)
2026-05-30 00:57:54 (6616): Setting Memory Size for VM. (4400MB)
2026-05-30 00:57:54 (6616): Setting CPU Count for VM. (4)
2026-05-30 00:57:54 (6616): Setting Chipset Options for VM.
2026-05-30 00:57:54 (6616): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-05-30 00:57:55 (6616): Setting Boot Options for VM.
2026-05-30 00:57:55 (6616): Setting Network Configuration for NAT. (Driver: virtio)
2026-05-30 00:57:55 (6616): Enabling VM Network Access.
2026-05-30 00:57:56 (6616): Disabling USB Support for VM.
2026-05-30 00:57:56 (6616): Disabling COM Port Support for VM.
2026-05-30 00:57:56 (6616): Disabling LPT Port Support for VM.
2026-05-30 00:57:57 (6616): Disabling Audio Support for VM.
2026-05-30 00:57:57 (6616): Disabling Clipboard Support for VM.
2026-05-30 00:57:57 (6616): Disabling Drag and Drop Support for VM.
2026-05-30 00:57:57 (6616): Adding storage controller(s) to VM.
2026-05-30 00:57:58 (6616): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-05-30 00:58:00 (6616): Adding VirtualBox Guest Additions to VM.
2026-05-30 00:58:00 (6616): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-05-30 00:58:00 (6616): forwarding host port 57737 to guest port 80
2026-05-30 00:58:01 (6616): Enabling remote desktop for VM.
2026-05-30 00:58:01 (6616): Required extension pack not installed, remote desktop not enabled.
2026-05-30 00:58:01 (6616): Enabling shared directory for VM.
2026-05-30 00:58:01 (6616): Starting VM using VBoxManage interface. (boinc_413cdc11d7af64fb, slot#0)
2026-05-30 00:58:06 (6616): Successfully started VM. (PID = '9308')
2026-05-30 00:58:06 (6616): Reporting VM Process ID to BOINC.
2026-05-30 00:58:06 (6616): Guest Log: BIOS: VirtualBox 7.2.8
2026-05-30 00:58:06 (6616): Guest Log: CPUID EDX: 0x178bfbff
2026-05-30 00:58:06 (6616): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-05-30 00:58:06 (6616): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-05-30 00:58:06 (6616): VM state change detected. (old = 'poweredoff', new = 'running')
2026-05-30 00:58:06 (6616): Detected: Web Application Enabled (http://localhost:57737)
2026-05-30 00:58:06 (6616): Preference change detected
2026-05-30 00:58:06 (6616): Setting CPU throttle for VM. (100%)
2026-05-30 00:58:07 (6616): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-05-30 00:58:08 (6616): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-05-30 00:58:08 (6616): Guest Log: BIOS: Booting from Hard Disk...
2026-05-30 00:58:12 (6616): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-05-30 00:58:12 (6616): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-05-30 00:58:12 (6616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-05-30 00:58:12 (6616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-05-30 00:58:12 (6616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-05-30 00:58:12 (6616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-05-30 00:58:12 (6616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-05-30 00:58:12 (6616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-05-30 00:58:12 (6616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-05-30 00:58:12 (6616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-05-30 00:58:12 (6616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-05-30 00:58:12 (6616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-05-30 00:58:12 (6616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-05-30 00:58:12 (6616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-05-30 00:58:12 (6616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-05-30 00:58:12 (6616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-05-30 00:58:12 (6616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-05-30 00:58:12 (6616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-05-30 00:58:12 (6616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-05-30 00:58:12 (6616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-05-30 00:58:12 (6616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-05-30 00:58:12 (6616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-05-30 00:58:12 (6616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-05-30 00:58:12 (6616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-05-30 00:58:12 (6616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-05-30 00:58:12 (6616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-05-30 00:58:12 (6616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-05-30 00:58:12 (6616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-05-30 00:58:12 (6616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-05-30 00:58:12 (6616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-05-30 00:58:12 (6616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-05-30 00:58:12 (6616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-05-30 00:58:20 (6616): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-05-30 00:58:20 (6616): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-05-30 00:58:26 (6616): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-05-30 00:58:26 (6616): Guest Log: 00:00:00.000127 main     Log opened 2026-05-30T00:58:23.350428000Z
2026-05-30 00:58:26 (6616): Guest Log: 00:00:00.000242 main     OS Product: Linux
2026-05-30 00:58:26 (6616): Guest Log: 00:00:00.000281 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-05-30 00:58:26 (6616): Guest Log: 00:00:00.000315 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-05-30 00:58:26 (6616): Guest Log: 00:00:00.000350 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-05-30 00:58:26 (6616): Guest Log: 00:00:00.000351 main     Process ID: 1306
2026-05-30 00:58:26 (6616): Guest Log: 00:00:00.000352 main     Package type: LINUX_64BITS_GENERIC
2026-05-30 00:58:26 (6616): Guest Log: 00:00:00.001130 main     5.2.32 r132073 started. Verbose level = 0
2026-05-30 00:58:26 (6616): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-05-30 00:58:26 (6616): Guest Log: [INFO] Mounting shared directory
2026-05-30 00:58:26 (6616): Guest Log: [INFO] Checking for init_data.xml
2026-05-30 00:58:32 (6616): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-05-30 00:58:32 (6616): Guest Log: [INFO] Detected branch: prod
2026-05-30 00:58:32 (6616): Guest Log: This is the prod version of the ATLAS job wrapper
2026-05-30 00:58:32 (6616): Guest Log: Copying input files
2026-05-30 00:58:34 (6616): Guest Log: Copied input files into RunAtlas.
2026-05-30 00:58:34 (6616): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-05-30 00:58:34 (6616): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-05-30 00:58:34 (6616): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-05-30 00:58:34 (6616): Guest Log: Further information can be found at the LHC@home message board.
2026-05-30 00:58:36 (6616): Guest Log: 00:00:10.002860 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 012 371 958 000ns (GuestNow=1 780 120 715 724 544 000 ns GuestLast=1 780 102 703 352 586 000 ns fSetTimeLastLoop=true )
2026-05-30 00:58:41 (6616): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-05-30 00:58:41 (6616): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-05-30 00:58:41 (6616): Guest Log: 2.6.3.0 1586 0 29996 159957 4 1 3117654 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-05-30 00:58:42 (6616): Guest Log: copied the webapp to /var/www
2026-05-30 00:58:42 (6616): Guest Log: ATHENA_PROC_NUMBER=4
2026-05-30 00:58:42 (6616): Guest Log: ATHENA_CORE_NUMBER=4
2026-05-30 00:58:42 (6616): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-05-30 00:58:42 (6616): Guest Log:  *** Starting ATLAS job. (PandaID=7157922486 taskID=50533940) ***
2026-05-30 02:38:09 (6616): Status Report: Elapsed Time: '6000.000000'
2026-05-30 02:38:09 (6616): Status Report: CPU Time: '22026.640625'
2026-05-30 04:18:11 (6616): Status Report: Elapsed Time: '12000.000000'
2026-05-30 04:18:11 (6616): Status Report: CPU Time: '45858.562500'
2026-05-30 04:31:53 (6616): Guest Log:  *** Job finished ***
2026-05-30 04:31:53 (6616): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-05-30 04:31:53 (6616): Guest Log: 2026-05-30 09:31:34,533 | INFO     | end of generic workflow (traces error code: 0)
2026-05-30 04:31:53 (6616): Guest Log: 2026-05-30 09:31:34,533 | INFO     | traces error code: 0
2026-05-30 04:31:53 (6616): Guest Log: 2026-05-30 09:31:34,533 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-05-30 04:31:53 (6616): Guest Log: 2026-05-30 09:31:45,119 | INFO     | 12688s have passed since pilot start - server update state is 'UPDATING_FINAL'
2026-05-30 04:31:53 (6616): Guest Log: 2026-05-30 09:31:46,165 | INFO     | PID=5989 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-05-30 04:31:53 (6616): Guest Log: 2026-05-30 09:31:46,165 | INFO     | found 0 job(s) in 20 queues
2026-05-30 04:31:53 (6616): Guest Log: 2026-05-30 09:31:46,165 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-05-30 04:31:53 (6616): Guest Log: 2026-05-30 09:31:46,166 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-05-30 04:31:53 (6616): Guest Log: 2026-05-30 09:31:46,166 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-05-30 04:31:53 (6616): Guest Log: 2026-05-30 09:31:46,166 | INFO     | [monitor] control thread has ended
2026-05-30 04:31:53 (6616): Guest Log: 2026-05-30 09:31:46,268 [wrapper] ==== pilot stdout END ====
2026-05-30 04:31:53 (6616): Guest Log: 2026-05-30 09:31:46,274 [wrapper] ==== wrapper stdout RESUME ====
2026-05-30 04:31:53 (6616): Guest Log: 2026-05-30 09:31:46,279 [wrapper] pilotpid: 5989
2026-05-30 04:31:53 (6616): Guest Log: 2026-05-30 09:31:46,285 [wrapper] Pilot exit status: 0
2026-05-30 04:31:53 (6616): Guest Log: 2026-05-30 09:31:46,394 [wrapper] pandaids: 7157922486
2026-05-30 04:31:53 (6616): Guest Log: 2026-05-30 09:31:46,427 [wrapper] cleanup supervisor_pilot 28295 5990
2026-05-30 04:31:53 (6616): Guest Log: 2026-05-30 09:31:46,433 [wrapper] Test setup, not cleaning
2026-05-30 04:31:53 (6616): Guest Log: 2026-05-30 09:31:46,438 [wrapper] apfmon messages muted
2026-05-30 04:31:53 (6616): Guest Log: 2026-05-30 09:31:46,444 [wrapper] ==== wrapper stdout END ====
2026-05-30 04:31:53 (6616): Guest Log: 2026-05-30 09:31:46,449 [wrapper] ==== wrapper stderr END ====
2026-05-30 04:31:53 (6616): Guest Log:  *** Error codes and diagnostics ***
2026-05-30 04:31:53 (6616): Guest Log:     "exeErrorCode": 0,
2026-05-30 04:31:53 (6616): Guest Log:     "pilotErrorCode": 0,
2026-05-30 04:31:53 (6616): Guest Log:  *** Listing of results directory ***
2026-05-30 04:31:53 (6616): Guest Log: total 246896
2026-05-30 04:31:53 (6616): Guest Log: -rw-r--r--. 1 atlas atlas    683926 May 30 01:18 pilot3.tar.gz
2026-05-30 04:31:53 (6616): Guest Log: -rw-r--r--. 1 atlas atlas      5631 May 30 01:22 queuedata.json
2026-05-30 04:31:53 (6616): Guest Log: -rwx------. 1 atlas atlas     36281 May 30 01:22 runpilot2-wrapper.sh
2026-05-30 04:31:53 (6616): Guest Log: -rwxr-xr-x. 1 atlas atlas      8615 May 30 05:58 init_data.xml
2026-05-30 04:31:53 (6616): Guest Log: -rwxr-xr-x. 1 atlas atlas    697408 May 30 05:58 input.tar.gz
2026-05-30 04:31:53 (6616): Guest Log: -rwxr-xr-x. 1 atlas atlas     15667 May 30 05:58 start_atlas.sh
2026-05-30 04:31:53 (6616): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 30 05:58 EVNT.50532940._000252.pool.root.1 -> /data/./ATLAS.root_0
2026-05-30 04:31:53 (6616): Guest Log: -rw-r--r--. 1 atlas atlas      2513 May 30 05:58 pandaJob.out
2026-05-30 04:31:53 (6616): Guest Log: -rw-------. 1 atlas atlas    995230 May 30 05:59 agis_schedconf.cvmfs.json
2026-05-30 04:31:53 (6616): Guest Log: -rw-------. 1 atlas atlas       422 May 30 05:59 workernode_map.json
2026-05-30 04:31:53 (6616): Guest Log: drwx------. 5 atlas atlas      4096 May 30 06:00 pilot3
2026-05-30 04:31:53 (6616): Guest Log: -rw-------. 1 atlas atlas 245799997 May 30 09:30 HITS.50533940._005017.pool.root.1
2026-05-30 04:31:53 (6616): Guest Log: -rw-------. 1 atlas atlas      1029 May 30 09:31 memory_monitor_summary.json
2026-05-30 04:31:53 (6616): Guest Log: -rw-------. 1 atlas atlas        95 May 30 09:31 pilot_heartbeat.json
2026-05-30 04:31:53 (6616): Guest Log: -rw-------. 1 atlas atlas   1502789 May 30 09:31 agis_ddmendpoints.agis.ALL.json
2026-05-30 04:31:53 (6616): Guest Log: -rw-------. 1 atlas atlas    323121 May 30 09:31 log.50533940._005017.job.log.tgz.1
2026-05-30 04:31:53 (6616): Guest Log: -rw-------. 1 atlas atlas      6368 May 30 09:31 heartbeat_new.json
2026-05-30 04:31:53 (6616): Guest Log: -rw-------. 1 atlas atlas      6259 May 30 09:31 heartbeat.json
2026-05-30 04:31:53 (6616): Guest Log: -rw-------. 1 atlas atlas       860 May 30 09:31 pilotlog.txt
2026-05-30 04:31:53 (6616): Guest Log: -rw-------. 1 atlas atlas   1161691 May 30 09:31 log.50533940._005017.job.log.1
2026-05-30 04:31:53 (6616): Guest Log: -rw-------. 1 atlas atlas       357 May 30 09:31 output.list
2026-05-30 04:31:53 (6616): Guest Log: -rw-r--r--. 1 atlas atlas       410 May 30 09:31 runtime_log
2026-05-30 04:31:53 (6616): Guest Log: -rw-------. 1 atlas atlas   1505280 May 30 09:31 result.tar.gz
2026-05-30 04:31:53 (6616): Guest Log: -rw-r--r--. 1 atlas atlas      8381 May 30 09:31 runtime_log.err
2026-05-30 04:31:53 (6616): Guest Log: -rw-------. 1 atlas atlas       660 May 30 09:31 3bcc481728f8.diag
2026-05-30 04:31:53 (6616): Guest Log: Looking for outputfile HITS.50533940._005017.pool.root.1
2026-05-30 04:31:53 (6616): Guest Log: HITS file was successfully produced
2026-05-30 04:31:53 (6616): Guest Log: -rw-------. 1 atlas atlas 245799997 May 30 09:30 /home/atlas/RunAtlas/HITS.50533940._005017.pool.root.1
2026-05-30 04:31:54 (6616): Guest Log: Successfully finished the ATLAS job!
2026-05-30 04:31:54 (6616): Guest Log: Copying the results back to the shared directory!
2026-05-30 04:31:54 (6616): Guest Log:  *** Contents of shared directory: ***
2026-05-30 04:31:54 (6616): Guest Log: total 543332
2026-05-30 04:31:54 (6616): Guest Log: -rwxrwxrwx. 1 root root 308333778 May 30 05:57 ATLAS.root_0
2026-05-30 04:31:54 (6616): Guest Log: -rwxrwxrwx. 1 root root 245799997 May 30  2026 HITS.pool.root.1
2026-05-30 04:31:54 (6616): Guest Log: -rwxrwxrwx. 1 root root      8615 May 30 05:57 init_data.xml
2026-05-30 04:31:54 (6616): Guest Log: -rwxrwxrwx. 1 root root    697408 May 30 05:53 input.tar.gz
2026-05-30 04:31:54 (6616): Guest Log: -rwxrwxrwx. 1 root root   1505280 May 30  2026 result.tar.gz
2026-05-30 04:31:54 (6616): Guest Log: -rwxrwxrwx. 1 root root     15667 May 30 05:53 start_atlas.sh
2026-05-30 04:31:54 (6616): Guest Log:  *** Success! Shutting down the machine. ***
2026-05-30 04:31:54 (6616): VM Completion File Detected.
2026-05-30 04:31:54 (6616): Powering off VM.
2026-05-30 04:31:54 (6616): Successfully stopped VM.
2026-05-30 04:31:54 (6616): Deregistering VM. (boinc_413cdc11d7af64fb, slot#0)
2026-05-30 04:31:54 (6616): Removing network bandwidth throttle group from VM.
2026-05-30 04:31:55 (6616): Removing VM from VirtualBox.
2026-05-30 04:32:00 (6616): called boinc_finish(0)

</stderr_txt>
]]>

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