Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:25:48 (2388787): wrapper (7.7.26015): starting
07:25:48 (2388787): wrapper: running run_atlas (--nthreads 12)
[2026-05-30 07:25:48] Arguments: --nthreads 12
[2026-05-30 07:25:48] Threads: 12
[2026-05-30 07:25:48] Checking for CVMFS
[2026-05-30 07:25:48] No cvmfs_config command found, will try listing directly
[2026-05-30 07:25:48] CVMFS is ok
[2026-05-30 07:25:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-30 07:25:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-30 07:25:48] Further information can be found at the LHC@home message board.
[2026-05-30 07:25:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-30 07:25:48] Checking for apptainer binary...
[2026-05-30 07:25:48] which: no apptainer in ((null))
[2026-05-30 07:25:48] apptainer is not installed, using version from CVMFS
[2026-05-30 07:25:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-30 07:25:48] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot120/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut22.grid.cesnet.cz
[2026-05-30 07:25:48] apptainer works
[2026-05-30 07:25:48] Set ATHENA_PROC_NUMBER=12
[2026-05-30 07:25:48] Set ATHENA_CORE_NUMBER=12
[2026-05-30 07:25:48] Starting ATLAS job with PandaID=7157923024
[2026-05-30 07:25:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot120/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-30 07:55:27]  *** The last 200 lines of the pilot log: ***
[2026-05-30 07:55:27]  storage_token=
[2026-05-30 07:55:27]  surl=/var/lib/boinc/var/slot120/slots/0/PanDA_Pilot-7157923024/log.50533940._005408.job.log.tgz.1
[2026-05-30 07:55:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/56/c7/log.50533940._005408.job.log.tgz.1
[2026-05-30 07:55:27]  workdir=None
[2026-05-30 07:55:27] ]
[2026-05-30 07:55:27] 2026-05-30 05:54:19,956 | INFO     | transferring file log.50533940._005408.job.log.tgz.1 from /var/lib/boinc/var/slot120/slots/0/PanDA_Pilot-7157923024/log.50533940._005408.job.log.tgz.1 to /var/lib/
[2026-05-30 07:55:27] 2026-05-30 05:54:19,956 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot120/slots/0/PanDA_Pilot-7157923024/log.50533940._005408.job.log.tgz.1 /var/lib/boinc/var/slot120/slots/0/
[2026-05-30 07:55:27] 2026-05-30 05:54:19,966 | INFO     | adding to output.list: log.50533940._005408.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/56/c7/log.50533940._005408.job.log.tg
[2026-05-30 07:55:27] 2026-05-30 05:54:19,967 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-05-30 07:55:27] 2026-05-30 05:54:19,967 | INFO     | summary of transferred files:
[2026-05-30 07:55:27] 2026-05-30 05:54:19,967 | INFO     |  -- lfn=log.50533940._005408.job.log.tgz.1, status_code=0, status=transferred
[2026-05-30 07:55:27] 2026-05-30 05:54:19,967 | INFO     | stage-out finished correctly
[2026-05-30 07:55:27] 2026-05-30 05:54:23,451 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-30 07:55:27] 2026-05-30 05:54:23,856 | INFO     | job 7157923024 has state=finished
[2026-05-30 07:55:27] 2026-05-30 05:54:23,857 | INFO     | preparing for final server update for job 7157923024 in state='finished'
[2026-05-30 07:55:27] 2026-05-30 05:54:24,367 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-05-30 07:55:27] 2026-05-30 05:54:24,367 | INFO     | reading metadata from: /var/lib/boinc/var/slot120/slots/0/PanDA_Pilot-7157923024/jobReport.json
[2026-05-30 07:55:27] 2026-05-30 05:54:24,369 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot120/slots/0/workernode_map.json
[2026-05-30 07:55:27] 2026-05-30 05:54:24,369 | INFO     | this job has now completed (state=finished)
[2026-05-30 07:55:27] 2026-05-30 05:54:24,369 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-30 07:55:27] 2026-05-30 05:54:24,369 | INFO     | log transfer has been attempted: DONE
[2026-05-30 07:55:27] 2026-05-30 05:54:24,369 | INFO     | job 7157923024 has finished - writing final server update
[2026-05-30 07:55:27] 2026-05-30 05:54:24,369 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2704880/.job.ad'
[2026-05-30 07:55:27] 2026-05-30 05:54:24,369 | INFO     | total number of processed events: 400 (read)
[2026-05-30 07:55:27] 2026-05-30 05:54:24,379 | INFO     | using path: /var/lib/boinc/var/slot120/slots/0/PanDA_Pilot-7157923024/memory_monitor_summary.json (trf name=prmon)
[2026-05-30 07:55:27] 2026-05-30 05:54:24,379 | INFO     | extracted standard info from prmon json
[2026-05-30 07:55:27] 2026-05-30 05:54:24,379 | INFO     | extracted standard memory fields from prmon json
[2026-05-30 07:55:27] 2026-05-30 05:54:24,379 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-30 07:55:27] 2026-05-30 05:54:24,379 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-30 07:55:27] 2026-05-30 05:54:24,380 | INFO     | fitting pss+swap vs Time
[2026-05-30 07:55:27] 2026-05-30 05:54:24,380 | INFO     | sum of square deviations: 2865170.0
[2026-05-30 07:55:27] 2026-05-30 05:54:24,380 | INFO     | sum of deviations: 197139800.0
[2026-05-30 07:55:27] 2026-05-30 05:54:24,380 | INFO     | mean x (centered): 0.0
[2026-05-30 07:55:27] 2026-05-30 05:54:24,380 | INFO     | mean y: 2853368.523809524
[2026-05-30 07:55:27] 2026-05-30 05:54:24,380 | INFO     | intersect: 2853368.523809524
[2026-05-30 07:55:27] 2026-05-30 05:54:24,380 | INFO     | chi2: 0.0012148635487121808
[2026-05-30 07:55:27] 2026-05-30 05:54:24,380 | INFO     | current memory leak: 68.81 B/s (using 21 data points, chi2=0.00)
[2026-05-30 07:55:27] 2026-05-30 05:54:24,380 | INFO     | could have reported an average CPU frequency of 3635 MHz (4 samples)
[2026-05-30 07:55:27] 2026-05-30 05:54:24,380 | INFO     | ..............................
[2026-05-30 07:55:27] 2026-05-30 05:54:24,380 | INFO     | . Timing measurements:
[2026-05-30 07:55:27] 2026-05-30 05:54:24,380 | INFO     | . get job = 0 s
[2026-05-30 07:55:27] 2026-05-30 05:54:24,380 | INFO     | . initial setup = 3 s
[2026-05-30 07:55:27] 2026-05-30 05:54:24,380 | INFO     | . payload setup = 5 s
[2026-05-30 07:55:27] 2026-05-30 05:54:24,380 | INFO     | . stage-in = 0 s
[2026-05-30 07:55:27] 2026-05-30 05:54:24,380 | INFO     | . payload execution = 1679 s
[2026-05-30 07:55:27] 2026-05-30 05:54:24,380 | INFO     | . stage-out = 0 s
[2026-05-30 07:55:27] 2026-05-30 05:54:24,381 | INFO     | . log creation = 0 s
[2026-05-30 07:55:27] 2026-05-30 05:54:24,381 | INFO     | ..............................
[2026-05-30 07:55:27] 2026-05-30 05:54:24,762 | WARNING  | process 2399618 can no longer be monitored (due to stat problems) - aborting
[2026-05-30 07:55:27] 2026-05-30 05:54:24,762 | INFO     | using path: /var/lib/boinc/var/slot120/slots/0/PanDA_Pilot-7157923024/memory_monitor_summary.json (trf name=prmon)
[2026-05-30 07:55:27] 2026-05-30 05:54:24,762 | INFO     | using path: /var/lib/boinc/var/slot120/slots/0/PanDA_Pilot-7157923024/memory_monitor_summary.json (trf name=prmon)
[2026-05-30 07:55:27] 2026-05-30 05:54:24,762 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-05-30 07:55:27] 2026-05-30 05:54:24,762 | WARNING  | maxPSS not found in memory monitor output
[2026-05-30 07:55:27] 2026-05-30 05:54:24,762 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3999138 B
[2026-05-30 07:55:27] 2026-05-30 05:54:24,763 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15616 B
[2026-05-30 07:55:27] 2026-05-30 05:54:24,763 | INFO     | executing command: df -mP /var/lib/boinc/var/slot120/slots/0
[2026-05-30 07:55:27] 2026-05-30 05:54:24,775 | INFO     | sufficient remaining disk space (329413296128 B)
[2026-05-30 07:55:27] 2026-05-30 05:54:24,776 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-05-30 07:55:27] 2026-05-30 05:54:24,777 | INFO     | size of work directory /var/lib/boinc/var/slot120/slots/0/PanDA_Pilot-7157923024: 4286968 B (within 5033164800 B limit)
[2026-05-30 07:55:27] 2026-05-30 05:54:24,777 | INFO     | pfn file=/var/lib/boinc/var/slot120/slots/0/PanDA_Pilot-7157923024/HITS.50533940._005408.pool.root.1 does not exist (skip from workdir size calculation)
[2026-05-30 07:55:27] 2026-05-30 05:54:24,777 | INFO     | total size of present files: 0 B (workdir size: 4286968 B)
[2026-05-30 07:55:27] 2026-05-30 05:54:24,777 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot120/slots/0/PanDA_Pilot-7157923024/HITS.50533940._005408.pool.root.1 since it does not exist
[2026-05-30 07:55:27] 2026-05-30 05:54:24,804 | INFO     | 
[2026-05-30 07:55:27] 2026-05-30 05:54:24,804 | INFO     | job summary report
[2026-05-30 07:55:27] 2026-05-30 05:54:24,804 | INFO     | --------------------------------------------------
[2026-05-30 07:55:27] 2026-05-30 05:54:24,804 | INFO     | PanDA job id: 7157923024
[2026-05-30 07:55:27] 2026-05-30 05:54:24,804 | INFO     | task id: 50533940
[2026-05-30 07:55:27] 2026-05-30 05:54:24,804 | INFO     | errors: (none)
[2026-05-30 07:55:27] 2026-05-30 05:54:24,804 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-30 07:55:27] 2026-05-30 05:54:24,804 | INFO     | pilot state: finished 
[2026-05-30 07:55:27] 2026-05-30 05:54:24,804 | INFO     | transexitcode: 0
[2026-05-30 07:55:27] 2026-05-30 05:54:24,805 | INFO     | exeerrorcode: 0
[2026-05-30 07:55:27] 2026-05-30 05:54:24,805 | INFO     | exeerrordiag: 
[2026-05-30 07:55:27] 2026-05-30 05:54:24,805 | INFO     | exitcode: 0
[2026-05-30 07:55:27] 2026-05-30 05:54:24,805 | INFO     | exitmsg: OK
[2026-05-30 07:55:27] 2026-05-30 05:54:24,805 | INFO     | cpuconsumptiontime: 17844 s
[2026-05-30 07:55:27] 2026-05-30 05:54:24,805 | INFO     | nevents: 400
[2026-05-30 07:55:27] 2026-05-30 05:54:24,805 | INFO     | neventsw: 0
[2026-05-30 07:55:27] 2026-05-30 05:54:24,805 | INFO     | pid: 2399618
[2026-05-30 07:55:27] 2026-05-30 05:54:24,805 | INFO     | pgrp: 2399618
[2026-05-30 07:55:27] 2026-05-30 05:54:24,805 | INFO     | corecount: 12
[2026-05-30 07:55:27] 2026-05-30 05:54:24,805 | INFO     | event service: False
[2026-05-30 07:55:27] 2026-05-30 05:54:24,805 | INFO     | sizes: {0: 2267570, 11: 2267570, 1688: 2292374, 1690: 2301396, 1693: 2301452, 1694: 2301646}
[2026-05-30 07:55:27] 2026-05-30 05:54:24,805 | INFO     | --------------------------------------------------
[2026-05-30 07:55:27] 2026-05-30 05:54:24,805 | INFO     | 
[2026-05-30 07:55:27] 2026-05-30 05:54:24,805 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot120/slots/0
[2026-05-30 07:55:27] 2026-05-30 05:54:24,821 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-30 07:55:27] 2026-05-30 05:54:24,821 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-30 07:55:27] 2026-05-30 05:54:24,821 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-30 07:55:27] 2026-05-30 05:54:24,821 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-30 07:55:27] 2026-05-30 05:54:24,821 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-30 07:55:27] 2026-05-30 05:54:24,821 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-30 07:55:27] 2026-05-30 05:54:24,821 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-30 07:55:27] 2026-05-30 05:54:24,821 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-30 07:55:27] 2026-05-30 05:54:24,821 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-30 07:55:27] 2026-05-30 05:54:24,821 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-30 07:55:27] 2026-05-30 05:54:24,821 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-30 07:55:27] 2026-05-30 05:54:24,821 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-30 07:55:27] 2026-05-30 05:54:24,821 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-30 07:55:27] 2026-05-30 05:54:24,821 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-30 07:55:27] 2026-05-30 05:54:24,821 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-30 07:55:27] 2026-05-30 05:54:24,821 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-30 07:55:27] 2026-05-30 05:54:24,821 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-30 07:55:27] 2026-05-30 05:54:24,821 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-30 07:55:27] 2026-05-30 05:54:24,821 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-30 07:55:27] 2026-05-30 05:54:24,821 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-30 07:55:27] 2026-05-30 05:54:24,822 | INFO     | job 7157923024 has completed (purged errors)
[2026-05-30 07:55:27] 2026-05-30 05:54:24,822 | INFO     | overall cleanup function is called
[2026-05-30 07:55:27] 2026-05-30 05:54:24,966 | INFO     | number of running child processes to parent process 2399618: 1
[2026-05-30 07:55:27] 2026-05-30 05:54:24,966 | INFO     | maximum number of monitored processes: 6
[2026-05-30 07:55:27] 2026-05-30 05:54:24,966 | INFO     | aborting job monitoring since job object (job id=7157923024) has expired
[2026-05-30 07:55:27] 2026-05-30 05:54:25,829 | INFO     | --- collectZombieJob: --- 10, [2399618]
[2026-05-30 07:55:27] 2026-05-30 05:54:25,829 | INFO     | zombie collector waiting for pid 2399618
[2026-05-30 07:55:27] 2026-05-30 05:54:25,830 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-30 07:55:27] 2026-05-30 05:54:25,830 | INFO     | collected zombie processes
[2026-05-30 07:55:27] 2026-05-30 05:54:25,830 | INFO     | will attempt to kill all subprocesses of pid=2399618
[2026-05-30 07:55:27] 2026-05-30 05:54:26,010 | INFO     | process IDs to be killed: [2399618] (in reverse order)
[2026-05-30 07:55:27] 2026-05-30 05:54:26,109 | WARNING  | found no corresponding commands to process id(s)
[2026-05-30 07:55:27] 2026-05-30 05:54:26,109 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-30 07:55:27] 2026-05-30 05:54:26,129 | INFO     | did not find any defunct processes belonging to 2399618
[2026-05-30 07:55:27] 2026-05-30 05:54:26,142 | INFO     | did not find any defunct processes belonging to 2399618
[2026-05-30 07:55:27] 2026-05-30 05:54:26,142 | INFO     | Ready for new job
[2026-05-30 07:55:27] 2026-05-30 05:54:26,143 | INFO     | ***************************************
[2026-05-30 07:55:27] 2026-05-30 05:54:26,143 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-30 07:55:27] 2026-05-30 05:54:26,143 | INFO     | ***************************************
[2026-05-30 07:55:27] 2026-05-30 05:54:26,143 | INFO     | 
[2026-05-30 07:55:27] 2026-05-30 05:54:26,146 | INFO     | architecture information:
[2026-05-30 07:55:27] 2026-05-30 05:54:26,147 | INFO     | executing command: cat /etc/os-release
[2026-05-30 07:55:27] 2026-05-30 05:54:26,158 | INFO     | cat /etc/os-release:
[2026-05-30 07:55:27] NAME="CentOS Linux"
[2026-05-30 07:55:27] VERSION="7 (Core)"
[2026-05-30 07:55:27] ID="centos"
[2026-05-30 07:55:27] ID_LIKE="rhel fedora"
[2026-05-30 07:55:27] VERSION_ID="7"
[2026-05-30 07:55:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-30 07:55:27] ANSI_COLOR="0;31"
[2026-05-30 07:55:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-30 07:55:27] HOME_URL="https://www.centos.org/"
[2026-05-30 07:55:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-30 07:55:27] 
[2026-05-30 07:55:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-30 07:55:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-30 07:55:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-30 07:55:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-30 07:55:27] 
[2026-05-30 07:55:27] 2026-05-30 05:54:26,158 | INFO     | ***************************************
[2026-05-30 07:55:27] 2026-05-30 05:54:26,661 | INFO     | executing command: df -mP /var/lib/boinc/var/slot120/slots/0
[2026-05-30 07:55:27] 2026-05-30 05:54:26,675 | INFO     | sufficient remaining disk space (329416441856 B)
[2026-05-30 07:55:27] 2026-05-30 05:54:26,676 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-30 07:55:27] 2026-05-30 05:54:26,676 | INFO     | current server update state: UPDATING_FINAL
[2026-05-30 07:55:27] 2026-05-30 05:54:26,676 | INFO     | update_server=False
[2026-05-30 07:55:27] 2026-05-30 05:54:26,676 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-30 07:55:27] 2026-05-30 05:54:26,676 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-30 07:55:27] 2026-05-30 05:54:26,677 | INFO     | aborting loop
[2026-05-30 07:55:27] 2026-05-30 05:54:27,524 | INFO     | all data control threads have been joined
[2026-05-30 07:55:27] 2026-05-30 05:54:27,670 | INFO     | all job control threads have been joined
[2026-05-30 07:55:27] 2026-05-30 05:54:27,681 | INFO     | [job] retrieve thread has finished
[2026-05-30 07:55:27] 2026-05-30 05:54:27,682 | INFO     | [job] job monitor thread has finished
[2026-05-30 07:55:27] 2026-05-30 05:54:27,713 | INFO     | [data] copytool_in thread has finished
[2026-05-30 07:55:27] 2026-05-30 05:54:28,003 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-30 07:55:27] 2026-05-30 05:54:28,090 | INFO     | all payload control threads have been joined
[2026-05-30 07:55:27] 2026-05-30 05:54:28,193 | INFO     | [payload] execute_payloads thread has finished
[2026-05-30 07:55:27] 2026-05-30 05:54:28,529 | INFO     | [data] control thread has finished
[2026-05-30 07:55:27] 2026-05-30 05:54:28,660 | INFO     | [payload] failed_post thread has finished
[2026-05-30 07:55:27] 2026-05-30 05:54:28,676 | INFO     | [job] control thread has finished
[2026-05-30 07:55:27] 2026-05-30 05:54:28,915 | INFO     | [job] validate thread has finished
[2026-05-30 07:55:27] 2026-05-30 05:54:28,975 | INFO     | [job] create_data_payload thread has finished
[2026-05-30 07:55:27] 2026-05-30 05:54:29,041 | INFO     | [payload] validate_pre thread has finished
[2026-05-30 07:55:27] 2026-05-30 05:54:29,095 | INFO     | [payload] control thread has finished
[2026-05-30 07:55:27] 2026-05-30 05:54:29,180 | INFO     | [payload] validate_post thread has finished
[2026-05-30 07:55:27] 2026-05-30 05:54:29,418 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-30 07:55:27] 2026-05-30 05:54:29,484 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-30 07:55:27] 2026-05-30 05:54:30,009 | INFO     | [data] copytool_out thread has finished
[2026-05-30 07:55:27] 2026-05-30 05:54:30,423 | INFO     | [job] queue monitor thread has finished
[2026-05-30 07:55:27] 2026-05-30 05:54:33,490 | INFO     | [data] queue_monitor thread has finished
[2026-05-30 07:55:27] 2026-05-30 05:54:37,634 | INFO     | job.realtimelogging is not enabled
[2026-05-30 07:55:27] 2026-05-30 05:54:38,639 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-30 07:55:27] 2026-05-30 05:54:57,296 | INFO     | PID=2393666 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-30 07:55:27] 2026-05-30 05:54:57,296 | INFO     | .. there are 3 such processes running
[2026-05-30 07:55:27] 2026-05-30 05:54:57,297 | INFO     | found 0 job(s) in 20 queues
[2026-05-30 07:55:27] 2026-05-30 05:54:57,297 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-30 07:55:27] 2026-05-30 05:54:57,297 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-30 07:55:27] 2026-05-30 05:55:01,103 | INFO     | [monitor] cgroup control has ended
[2026-05-30 07:55:27] 2026-05-30 05:55:02,856 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22554946324288)>', '<ExcThread(monitor, started 22554707502848)>']
[2026-05-30 07:55:27] 2026-05-30 05:55:03,328 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-30 07:55:27] 2026-05-30 05:55:03,328 | INFO     | [monitor] control thread has ended
[2026-05-30 07:55:27] 2026-05-30 05:55:07,870 | INFO     | all workflow threads have been joined
[2026-05-30 07:55:27] 2026-05-30 05:55:07,870 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-30 07:55:27] 2026-05-30 05:55:07,871 | INFO     | traces error code: 0
[2026-05-30 07:55:27] 2026-05-30 05:55:07,871 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-30 07:55:27] 2026-05-30 05:55:07,965 [wrapper] ==== pilot stdout END ====
[2026-05-30 07:55:27] 2026-05-30 05:55:07,967 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-30 07:55:27] 2026-05-30 05:55:07,968 [wrapper] pilotpid: 2393666
[2026-05-30 07:55:27] 2026-05-30 05:55:07,970 [wrapper] Pilot exit status: 0
[2026-05-30 07:55:27] 2026-05-30 05:55:07,977 [wrapper] pandaids: 7157923024
[2026-05-30 07:55:27] 2026-05-30 05:55:08,052 [wrapper] cleanup supervisor_pilot 2459597 2393667
[2026-05-30 07:55:27] 2026-05-30 05:55:08,054 [wrapper] Test setup, not cleaning
[2026-05-30 07:55:27] 2026-05-30 05:55:08,055 [wrapper] apfmon messages muted
[2026-05-30 07:55:27] 2026-05-30 05:55:08,057 [wrapper] ==== wrapper stdout END ====
[2026-05-30 07:55:27] 2026-05-30 05:55:08,058 [wrapper] ==== wrapper stderr END ====
[2026-05-30 07:55:27]  *** Error codes and diagnostics ***
[2026-05-30 07:55:27]     "exeErrorCode": 0,
[2026-05-30 07:55:27]     "pilotErrorCode": 0,
[2026-05-30 07:55:27]  *** Listing of results directory ***
[2026-05-30 07:55:27] total 545812
[2026-05-30 07:55:27] -rw-r--r--. 1 boinc boinc      5631 May 30 03:18 queuedata.json
[2026-05-30 07:55:27] -rw-r--r--. 1 boinc boinc    683926 May 30 03:18 pilot3.tar.gz
[2026-05-30 07:55:27] -rwx------. 1 boinc boinc     36281 May 30 03:18 runpilot2-wrapper.sh
[2026-05-30 07:55:27] -rw-r--r--. 1 boinc boinc       100 May 30 07:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-30 07:55:27] -rwxr-xr-x. 1 boinc boinc      7986 May 30 07:25 run_atlas
[2026-05-30 07:55:27] -rw-r--r--. 1 boinc boinc       105 May 30 07:25 job.xml
[2026-05-30 07:55:27] -rw-r--r--. 2 boinc boinc 309901577 May 30 07:25 EVNT.50532940._000268.pool.root.1
[2026-05-30 07:55:27] -rw-r--r--. 2 boinc boinc     15667 May 30 07:25 start_atlas.sh
[2026-05-30 07:55:27] drwxrwx--x. 2 boinc boinc      4096 May 30 07:25 shared
[2026-05-30 07:55:27] -rw-r--r--. 2 boinc boinc    697404 May 30 07:25 input.tar.gz
[2026-05-30 07:55:27] -rw-r--r--. 1 boinc boinc      6628 May 30 07:25 init_data.xml
[2026-05-30 07:55:27] -rw-r--r--. 1 boinc boinc         0 May 30 07:25 boinc_lockfile
[2026-05-30 07:55:27] -rw-r--r--. 1 boinc boinc      2513 May 30 07:25 pandaJob.out
[2026-05-30 07:55:27] -rw-------. 1 boinc boinc    995230 May 30 07:25 agis_schedconf.cvmfs.json
[2026-05-30 07:55:27] -rw-------. 1 boinc boinc   1502789 May 30 07:25 agis_ddmendpoints.agis.ALL.json
[2026-05-30 07:55:27] -rw-------. 1 boinc boinc       445 May 30 07:25 workernode_map.json
[2026-05-30 07:55:27] drwx------. 5 boinc boinc      4096 May 30 07:25 pilot3
[2026-05-30 07:55:27] -rw-r--r--. 1 boinc boinc       486 May 30 07:53 boinc_task_state.xml
[2026-05-30 07:55:27] -rw-------. 1 boinc boinc 243816118 May 30 07:53 HITS.50533940._005408.pool.root.1
[2026-05-30 07:55:27] -rw-------. 1 boinc boinc      1031 May 30 07:54 memory_monitor_summary.json
[2026-05-30 07:55:27] -rw-------. 1 boinc boinc    329430 May 30 07:54 log.50533940._005408.job.log.tgz.1
[2026-05-30 07:55:27] -rw-------. 1 boinc boinc      6385 May 30 07:54 heartbeat_new.json
[2026-05-30 07:55:27] -rw-------. 1 boinc boinc      6276 May 30 07:54 heartbeat.json
[2026-05-30 07:55:27] -rw-------. 1 boinc boinc        95 May 30 07:54 pilot_heartbeat.json
[2026-05-30 07:55:27] -rw-------. 1 boinc boinc      4905 May 30 07:55 pilotlog.txt
[2026-05-30 07:55:27] -rw-------. 1 boinc boinc    207746 May 30 07:55 log.50533940._005408.job.log.1
[2026-05-30 07:55:27] -rw-------. 1 boinc boinc       357 May 30 07:55 output.list
[2026-05-30 07:55:27] -rw-r--r--. 1 boinc boinc       410 May 30 07:55 runtime_log
[2026-05-30 07:55:27] -rw-------. 1 boinc boinc    552960 May 30 07:55 result.tar.gz
[2026-05-30 07:55:27] -rw-r--r--. 1 boinc boinc      8846 May 30 07:55 runtime_log.err
[2026-05-30 07:55:27] -rw-------. 1 boinc boinc       657 May 30 07:55 3afeb3a9ba69.diag
[2026-05-30 07:55:27] -rw-r--r--. 1 boinc boinc        26 May 30 07:55 wrapper_checkpoint.txt
[2026-05-30 07:55:27] -rw-r--r--. 1 boinc boinc      8192 May 30 07:55 boinc_mmap_file
[2026-05-30 07:55:27] -rw-r--r--. 1 boinc boinc     22377 May 30 07:55 stderr.txt
[2026-05-30 07:55:27] HITS file was successfully produced:
[2026-05-30 07:55:27] -rw-------. 1 boinc boinc 243816118 May 30 07:53 shared/HITS.pool.root.1
[2026-05-30 07:55:27]  *** Contents of shared directory: ***
[2026-05-30 07:55:27] total 541992
[2026-05-30 07:55:27] -rw-r--r--. 2 boinc boinc 309901577 May 30 07:25 ATLAS.root_0
[2026-05-30 07:55:27] -rw-r--r--. 2 boinc boinc     15667 May 30 07:25 start_atlas.sh
[2026-05-30 07:55:27] -rw-r--r--. 2 boinc boinc    697404 May 30 07:25 input.tar.gz
[2026-05-30 07:55:27] -rw-------. 1 boinc boinc 243816118 May 30 07:53 HITS.pool.root.1
[2026-05-30 07:55:27] -rw-------. 1 boinc boinc    552960 May 30 07:55 result.tar.gz
07:55:28 (2388787): run_atlas exited; CPU time 17883.254808
07:55:28 (2388787): called boinc_finish(0)

</stderr_txt>
]]>

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