Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:49:40 (3945569): wrapper (7.7.26015): starting
06:49:40 (3945569): wrapper: running run_atlas (--nthreads 4)
[2026-05-30 06:49:40] Arguments: --nthreads 4
[2026-05-30 06:49:40] Threads: 4
[2026-05-30 06:49:40] Checking for CVMFS
[2026-05-30 06:49:40] No cvmfs_config command found, will try listing directly
[2026-05-30 06:49:40] CVMFS is ok
[2026-05-30 06:49:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-30 06:49:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-30 06:49:40] Further information can be found at the LHC@home message board.
[2026-05-30 06:49:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-30 06:49:40] Checking for apptainer binary...
[2026-05-30 06:49:40] which: no apptainer in ((null))
[2026-05-30 06:49:40] apptainer is not installed, using version from CVMFS
[2026-05-30 06:49:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-30 06:49:40] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2026-05-30 06:49:40] apptainer works
[2026-05-30 06:49:40] Set ATHENA_PROC_NUMBER=4
[2026-05-30 06:49:40] Set ATHENA_CORE_NUMBER=4
[2026-05-30 06:49:40] Starting ATLAS job with PandaID=7157920598
[2026-05-30 06:49:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-30 09:49:18]  *** The last 200 lines of the pilot log: ***
[2026-05-30 09:49:18] 2026-05-30 07:43:07,933 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-30 09:49:18] 2026-05-30 07:43:08,060 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-30 09:49:18] 2026-05-30 07:43:09,088 | INFO     | job 7157920598 has state=finished
[2026-05-30 09:49:18] 2026-05-30 07:43:09,088 | INFO     | preparing for final server update for job 7157920598 in state='finished'
[2026-05-30 09:49:18] 2026-05-30 07:43:09,088 | INFO     | reading metadata from: /var/lib/boinc/var/slot44/slots/0/PanDA_Pilot-7157920598/jobReport.json
[2026-05-30 09:49:18] 2026-05-30 07:43:09,091 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot44/slots/0/workernode_map.json
[2026-05-30 09:49:18] 2026-05-30 07:43:09,091 | INFO     | this job has now completed (state=finished)
[2026-05-30 09:49:18] 2026-05-30 07:43:09,091 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-30 09:49:18] 2026-05-30 07:43:09,092 | INFO     | log transfer has been attempted: DONE
[2026-05-30 09:49:18] 2026-05-30 07:43:09,092 | INFO     | job 7157920598 has finished - writing final server update
[2026-05-30 09:49:18] 2026-05-30 07:43:09,092 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1144265/.job.ad'
[2026-05-30 09:49:18] 2026-05-30 07:43:09,092 | INFO     | total number of processed events: 400 (read)
[2026-05-30 09:49:18] 2026-05-30 07:43:09,104 | INFO     | using path: /var/lib/boinc/var/slot44/slots/0/PanDA_Pilot-7157920598/memory_monitor_summary.json (trf name=prmon)
[2026-05-30 09:49:18] 2026-05-30 07:43:09,104 | INFO     | extracted standard info from prmon json
[2026-05-30 09:49:18] 2026-05-30 07:43:09,104 | INFO     | extracted standard memory fields from prmon json
[2026-05-30 09:49:18] 2026-05-30 07:43:09,105 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-30 09:49:18] 2026-05-30 07:43:09,105 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-30 09:49:18] 2026-05-30 07:43:09,108 | INFO     | fitting pss+swap vs Time
[2026-05-30 09:49:18] 2026-05-30 07:43:09,108 | INFO     | sum of square deviations: 1523386702.5
[2026-05-30 09:49:18] 2026-05-30 07:43:09,109 | INFO     | sum of deviations: -18085499111.999996
[2026-05-30 09:49:18] 2026-05-30 07:43:09,109 | INFO     | mean x (centered): 0.0
[2026-05-30 09:49:18] 2026-05-30 07:43:09,109 | INFO     | mean y: 2406808.4470588234
[2026-05-30 09:49:18] 2026-05-30 07:43:09,110 | INFO     | intersect: 2406808.4470588234
[2026-05-30 09:49:18] 2026-05-30 07:43:09,110 | INFO     | chi2: 1.555632779880331
[2026-05-30 09:49:18] 2026-05-30 07:43:09,110 | INFO     | sum of square deviations: 1392881930.0
[2026-05-30 09:49:18] 2026-05-30 07:43:09,111 | INFO     | sum of deviations: -17339745991.000004
[2026-05-30 09:49:18] 2026-05-30 07:43:09,111 | INFO     | mean x (centered): 0.0
[2026-05-30 09:49:18] 2026-05-30 07:43:09,111 | INFO     | mean y: 2407680.139393939
[2026-05-30 09:49:18] 2026-05-30 07:43:09,111 | INFO     | intersect: 2407680.139393939
[2026-05-30 09:49:18] 2026-05-30 07:43:09,112 | INFO     | chi2: 1.5524284705473754
[2026-05-30 09:49:18] 2026-05-30 07:43:09,112 | INFO     | current chi2=1.5524284705473754 (change=0.20598108849327373 %)
[2026-05-30 09:49:18] 2026-05-30 07:43:09,112 | INFO     | right removable region: 164
[2026-05-30 09:49:18] 2026-05-30 07:43:09,112 | INFO     | sum of square deviations: 1392881930.0
[2026-05-30 09:49:18] 2026-05-30 07:43:09,113 | INFO     | sum of deviations: -36091214006.000015
[2026-05-30 09:49:18] 2026-05-30 07:43:09,113 | INFO     | mean x (centered): 0.0
[2026-05-30 09:49:18] 2026-05-30 07:43:09,113 | INFO     | mean y: 2427412.5454545454
[2026-05-30 09:49:18] 2026-05-30 07:43:09,113 | INFO     | intersect: 2427412.5454545454
[2026-05-30 09:49:18] 2026-05-30 07:43:09,114 | INFO     | chi2: 0.2901066884929902
[2026-05-30 09:49:18] 2026-05-30 07:43:09,114 | INFO     | current chi2=0.2901066884929902 (change=81.35121011558351 %)
[2026-05-30 09:49:18] 2026-05-30 07:43:09,114 | INFO     | sum of square deviations: 1270051720.0
[2026-05-30 09:49:18] 2026-05-30 07:43:09,115 | INFO     | sum of deviations: -28461076281.0
[2026-05-30 09:49:18] 2026-05-30 07:43:09,115 | INFO     | mean x (centered): 0.0
[2026-05-30 09:49:18] 2026-05-30 07:43:09,115 | INFO     | mean y: 2417933.7625
[2026-05-30 09:49:18] 2026-05-30 07:43:09,115 | INFO     | intersect: 2417933.7625
[2026-05-30 09:49:18] 2026-05-30 07:43:09,116 | INFO     | chi2: 0.2638968792892409
[2026-05-30 09:49:18] 2026-05-30 07:43:09,116 | INFO     | current chi2=0.2638968792892409 (change=9.034541512951924 %)
[2026-05-30 09:49:18] 2026-05-30 07:43:09,116 | INFO     | left removable region: 10
[2026-05-30 09:49:18] 2026-05-30 07:43:09,116 | INFO     | sum of square deviations: 1132458442.5
[2026-05-30 09:49:18] 2026-05-30 07:43:09,117 | INFO     | sum of deviations: -27292555828.000008
[2026-05-30 09:49:18] 2026-05-30 07:43:09,117 | INFO     | mean x (centered): 0.0
[2026-05-30 09:49:18] 2026-05-30 07:43:09,117 | INFO     | mean y: 2419488.662337662
[2026-05-30 09:49:18] 2026-05-30 07:43:09,117 | INFO     | intersect: 2419488.662337662
[2026-05-30 09:49:18] 2026-05-30 07:43:09,117 | INFO     | chi2: 0.2584724440300856
[2026-05-30 09:49:18] 2026-05-30 07:43:09,118 | INFO     | current memory leak: -24.10 B/s (using 154 data points, chi2=0.26)
[2026-05-30 09:49:18] 2026-05-30 07:43:09,118 | INFO     | could have reported an average CPU frequency of 2826 MHz (9 samples)
[2026-05-30 09:49:18] 2026-05-30 07:43:09,118 | INFO     | ..............................
[2026-05-30 09:49:18] 2026-05-30 07:43:09,118 | INFO     | . Timing measurements:
[2026-05-30 09:49:18] 2026-05-30 07:43:09,118 | INFO     | . get job = 0 s
[2026-05-30 09:49:18] 2026-05-30 07:43:09,118 | INFO     | . initial setup = 4 s
[2026-05-30 09:49:18] 2026-05-30 07:43:09,119 | INFO     | . payload setup = 9 s
[2026-05-30 09:49:18] 2026-05-30 07:43:09,119 | INFO     | . stage-in = 0 s
[2026-05-30 09:49:18] 2026-05-30 07:43:09,119 | INFO     | . payload execution = 10364 s
[2026-05-30 09:49:18] 2026-05-30 07:43:09,119 | INFO     | . stage-out = 0 s
[2026-05-30 09:49:18] 2026-05-30 07:43:09,119 | INFO     | . log creation = 0 s
[2026-05-30 09:49:18] 2026-05-30 07:43:09,119 | INFO     | ..............................
[2026-05-30 09:49:18] 2026-05-30 07:43:09,484 | INFO     | 
[2026-05-30 09:49:18] 2026-05-30 07:43:09,484 | INFO     | job summary report
[2026-05-30 09:49:18] 2026-05-30 07:43:09,484 | INFO     | --------------------------------------------------
[2026-05-30 09:49:18] 2026-05-30 07:43:09,484 | INFO     | PanDA job id: 7157920598
[2026-05-30 09:49:18] 2026-05-30 07:43:09,484 | INFO     | task id: 50533940
[2026-05-30 09:49:18] 2026-05-30 07:43:09,484 | INFO     | errors: (none)
[2026-05-30 09:49:18] 2026-05-30 07:43:09,484 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-30 09:49:18] 2026-05-30 07:43:09,484 | INFO     | pilot state: finished 
[2026-05-30 09:49:18] 2026-05-30 07:43:09,484 | INFO     | transexitcode: 0
[2026-05-30 09:49:18] 2026-05-30 07:43:09,484 | INFO     | exeerrorcode: 0
[2026-05-30 09:49:18] 2026-05-30 07:43:09,485 | INFO     | exeerrordiag: 
[2026-05-30 09:49:18] 2026-05-30 07:43:09,485 | INFO     | exitcode: 0
[2026-05-30 09:49:18] 2026-05-30 07:43:09,485 | INFO     | exitmsg: OK
[2026-05-30 09:49:18] 2026-05-30 07:43:09,485 | INFO     | cpuconsumptiontime: 39244 s
[2026-05-30 09:49:18] 2026-05-30 07:43:09,485 | INFO     | nevents: 400
[2026-05-30 09:49:18] 2026-05-30 07:43:09,485 | INFO     | neventsw: 0
[2026-05-30 09:49:18] 2026-05-30 07:43:09,485 | INFO     | pid: 3954928
[2026-05-30 09:49:18] 2026-05-30 07:43:09,485 | INFO     | pgrp: 3954928
[2026-05-30 09:49:18] 2026-05-30 07:43:09,485 | INFO     | corecount: 4
[2026-05-30 09:49:18] 2026-05-30 07:43:09,485 | INFO     | event service: False
[2026-05-30 09:49:18] 2026-05-30 07:43:09,485 | INFO     | sizes: {0: 2267569, 11: 2267569, 10377: 2296249, 10378: 2305269, 10380: 2305325, 10381: 2305583}
[2026-05-30 09:49:18] 2026-05-30 07:43:09,485 | INFO     | --------------------------------------------------
[2026-05-30 09:49:18] 2026-05-30 07:43:09,485 | INFO     | 
[2026-05-30 09:49:18] 2026-05-30 07:43:09,486 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot44/slots/0
[2026-05-30 09:49:18] 2026-05-30 07:43:09,509 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-30 09:49:18] 2026-05-30 07:43:09,509 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-30 09:49:18] 2026-05-30 07:43:09,509 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-30 09:49:18] 2026-05-30 07:43:09,509 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-30 09:49:18] 2026-05-30 07:43:09,510 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-30 09:49:18] 2026-05-30 07:43:09,510 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-30 09:49:18] 2026-05-30 07:43:09,510 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-30 09:49:18] 2026-05-30 07:43:09,510 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-30 09:49:18] 2026-05-30 07:43:09,510 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-30 09:49:18] 2026-05-30 07:43:09,510 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-30 09:49:18] 2026-05-30 07:43:09,510 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-30 09:49:18] 2026-05-30 07:43:09,510 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-30 09:49:18] 2026-05-30 07:43:09,510 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-30 09:49:18] 2026-05-30 07:43:09,510 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-30 09:49:18] 2026-05-30 07:43:09,511 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-30 09:49:18] 2026-05-30 07:43:09,511 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-30 09:49:18] 2026-05-30 07:43:09,511 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-30 09:49:18] 2026-05-30 07:43:09,511 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-30 09:49:18] 2026-05-30 07:43:09,511 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-30 09:49:18] 2026-05-30 07:43:09,511 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-30 09:49:18] 2026-05-30 07:43:09,511 | INFO     | job 7157920598 has completed (purged errors)
[2026-05-30 09:49:18] 2026-05-30 07:43:09,511 | INFO     | overall cleanup function is called
[2026-05-30 09:49:18] 2026-05-30 07:43:10,519 | INFO     | --- collectZombieJob: --- 10, [3954928]
[2026-05-30 09:49:18] 2026-05-30 07:43:10,519 | INFO     | zombie collector waiting for pid 3954928
[2026-05-30 09:49:18] 2026-05-30 07:43:10,519 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-30 09:49:18] 2026-05-30 07:43:10,519 | INFO     | collected zombie processes
[2026-05-30 09:49:18] 2026-05-30 07:43:10,519 | INFO     | will attempt to kill all subprocesses of pid=3954928
[2026-05-30 09:49:18] 2026-05-30 07:43:10,819 | INFO     | process IDs to be killed: [3954928] (in reverse order)
[2026-05-30 09:49:18] 2026-05-30 07:43:10,957 | WARNING  | found no corresponding commands to process id(s)
[2026-05-30 09:49:18] 2026-05-30 07:43:10,957 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-30 09:49:18] 2026-05-30 07:43:10,970 | INFO     | did not find any defunct processes belonging to 3954928
[2026-05-30 09:49:18] 2026-05-30 07:43:10,983 | INFO     | did not find any defunct processes belonging to 3954928
[2026-05-30 09:49:18] 2026-05-30 07:43:10,983 | INFO     | Ready for new job
[2026-05-30 09:49:18] 2026-05-30 07:43:10,985 | INFO     | ***************************************
[2026-05-30 09:49:18] 2026-05-30 07:43:10,985 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-30 09:49:18] 2026-05-30 07:43:10,985 | INFO     | ***************************************
[2026-05-30 09:49:18] 2026-05-30 07:43:10,985 | INFO     | 
[2026-05-30 09:49:18] 2026-05-30 07:43:10,989 | INFO     | architecture information:
[2026-05-30 09:49:18] 2026-05-30 07:43:10,989 | INFO     | executing command: cat /etc/os-release
[2026-05-30 09:49:18] 2026-05-30 07:43:11,004 | INFO     | cat /etc/os-release:
[2026-05-30 09:49:18] NAME="CentOS Linux"
[2026-05-30 09:49:18] VERSION="7 (Core)"
[2026-05-30 09:49:18] ID="centos"
[2026-05-30 09:49:18] ID_LIKE="rhel fedora"
[2026-05-30 09:49:18] VERSION_ID="7"
[2026-05-30 09:49:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-30 09:49:18] ANSI_COLOR="0;31"
[2026-05-30 09:49:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-30 09:49:18] HOME_URL="https://www.centos.org/"
[2026-05-30 09:49:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-30 09:49:18] 
[2026-05-30 09:49:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-30 09:49:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-30 09:49:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-30 09:49:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-30 09:49:18] 
[2026-05-30 09:49:18] 2026-05-30 07:43:11,004 | INFO     | ***************************************
[2026-05-30 09:49:18] 2026-05-30 07:43:11,507 | INFO     | executing command: df -mP /var/lib/boinc/var/slot44/slots/0
[2026-05-30 09:49:18] 2026-05-30 07:43:11,522 | INFO     | sufficient remaining disk space (62143856640 B)
[2026-05-30 09:49:18] 2026-05-30 07:43:11,523 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-30 09:49:18] 2026-05-30 07:43:11,523 | INFO     | current server update state: UPDATING_FINAL
[2026-05-30 09:49:18] 2026-05-30 07:43:11,523 | INFO     | update_server=False
[2026-05-30 09:49:18] 2026-05-30 07:43:11,523 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-30 09:49:18] 2026-05-30 07:43:11,523 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-30 09:49:18] 2026-05-30 07:43:11,524 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-30 09:49:18] 2026-05-30 07:43:11,524 | INFO     | aborting loop
[2026-05-30 09:49:18] 2026-05-30 07:43:11,888 | INFO     | all payload control threads have been joined
[2026-05-30 09:49:18] 2026-05-30 07:43:12,368 | INFO     | all job control threads have been joined
[2026-05-30 09:49:18] 2026-05-30 07:43:12,528 | INFO     | [job] retrieve thread has finished
[2026-05-30 09:49:18] 2026-05-30 07:43:12,529 | INFO     | [job] job monitor thread has finished
[2026-05-30 09:49:18] 2026-05-30 07:43:12,571 | INFO     | all data control threads have been joined
[2026-05-30 09:49:18] 2026-05-30 07:43:12,695 | INFO     | [data] copytool_in thread has finished
[2026-05-30 09:49:18] 2026-05-30 07:43:12,892 | INFO     | [payload] control thread has finished
[2026-05-30 09:49:18] 2026-05-30 07:43:12,974 | INFO     | [payload] failed_post thread has finished
[2026-05-30 09:49:18] 2026-05-30 07:43:13,368 | INFO     | [payload] execute_payloads thread has finished
[2026-05-30 09:49:18] 2026-05-30 07:43:13,373 | INFO     | [job] control thread has finished
[2026-05-30 09:49:18] 2026-05-30 07:43:13,465 | INFO     | [job] validate thread has finished
[2026-05-30 09:49:18] 2026-05-30 07:43:13,529 | INFO     | [data] copytool_out thread has finished
[2026-05-30 09:49:18] 2026-05-30 07:43:13,576 | INFO     | [data] control thread has finished
[2026-05-30 09:49:18] 2026-05-30 07:43:13,862 | INFO     | [payload] validate_pre thread has finished
[2026-05-30 09:49:18] 2026-05-30 07:43:13,924 | INFO     | [job] create_data_payload thread has finished
[2026-05-30 09:49:18] 2026-05-30 07:43:13,951 | INFO     | [payload] validate_post thread has finished
[2026-05-30 09:49:18] 2026-05-30 07:43:14,190 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-30 09:49:18] 2026-05-30 07:43:14,221 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-30 09:49:18] 2026-05-30 07:43:15,226 | INFO     | [job] queue monitor thread has finished
[2026-05-30 09:49:18] 2026-05-30 07:43:18,195 | INFO     | [data] queue_monitor thread has finished
[2026-05-30 09:49:18] 2026-05-30 07:43:22,513 | INFO     | job.realtimelogging is not enabled
[2026-05-30 09:49:18] 2026-05-30 07:43:23,518 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-30 09:49:18] 2026-05-30 07:43:42,861 | INFO     | PID=3949716 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-30 09:49:18] 2026-05-30 07:43:42,861 | INFO     | .. there are 10 such processes running
[2026-05-30 09:49:18] 2026-05-30 07:43:42,863 | INFO     | found 0 job(s) in 20 queues
[2026-05-30 09:49:18] 2026-05-30 07:43:42,863 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-30 09:49:18] 2026-05-30 07:43:42,863 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-30 09:49:18] 2026-05-30 07:44:11,140 | INFO     | [monitor] cgroup control has ended
[2026-05-30 09:49:18] 2026-05-30 07:44:12,139 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23430012200768)>', '<ExcThread(monitor, started 23429705078528)>']
[2026-05-30 09:49:18] 2026-05-30 07:44:13,013 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-30 09:49:18] 2026-05-30 07:44:13,013 | INFO     | [monitor] control thread has ended
[2026-05-30 09:49:18] 2026-05-30 07:44:17,141 | INFO     | all workflow threads have been joined
[2026-05-30 09:49:18] 2026-05-30 07:44:17,143 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-30 09:49:18] 2026-05-30 07:44:17,143 | INFO     | traces error code: 0
[2026-05-30 09:49:18] 2026-05-30 07:44:17,143 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-30 09:49:18] 2026-05-30 07:44:17,286 [wrapper] ==== pilot stdout END ====
[2026-05-30 09:49:18] 2026-05-30 07:44:17,289 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-30 09:49:18] 2026-05-30 07:44:17,293 [wrapper] pilotpid: 3949716
[2026-05-30 09:49:18] 2026-05-30 07:44:17,296 [wrapper] Pilot exit status: 0
[2026-05-30 09:49:18] 2026-05-30 07:44:17,308 [wrapper] pandaids: 7157920598
[2026-05-30 09:49:18] 2026-05-30 07:44:17,405 [wrapper] cleanup supervisor_pilot 4173656 3949718
[2026-05-30 09:49:18] 2026-05-30 07:44:17,409 [wrapper] Test setup, not cleaning
[2026-05-30 09:49:18] 2026-05-30 07:44:17,412 [wrapper] apfmon messages muted
[2026-05-30 09:49:18] 2026-05-30 07:44:17,416 [wrapper] ==== wrapper stdout END ====
[2026-05-30 09:49:18] 2026-05-30 07:44:17,419 [wrapper] ==== wrapper stderr END ====
[2026-05-30 09:49:18]  *** Error codes and diagnostics ***
[2026-05-30 09:49:18]     "exeErrorCode": 0,
[2026-05-30 09:49:18]     "pilotErrorCode": 0,
[2026-05-30 09:49:18]  *** Listing of results directory ***
[2026-05-30 09:49:18] total 547656
[2026-05-30 09:49:18] -rw-r--r--. 1 boinc boinc    683926 May 30 00:41 pilot3.tar.gz
[2026-05-30 09:49:18] -rw-r--r--. 1 boinc boinc      5631 May 30 00:43 queuedata.json
[2026-05-30 09:49:18] -rwx------. 1 boinc boinc     36281 May 30 00:43 runpilot2-wrapper.sh
[2026-05-30 09:49:18] -rw-r--r--. 1 boinc boinc       100 May 30 06:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-30 09:49:18] -rwxr-xr-x. 1 boinc boinc      7986 May 30 06:48 run_atlas
[2026-05-30 09:49:18] -rw-r--r--. 1 boinc boinc       105 May 30 06:48 job.xml
[2026-05-30 09:49:18] -rw-r--r--. 2 boinc boinc 307853620 May 30 06:49 EVNT.50532940._000222.pool.root.1
[2026-05-30 09:49:18] -rw-r--r--. 1 boinc boinc      6482 May 30 06:49 init_data.xml
[2026-05-30 09:49:18] -rw-r--r--. 2 boinc boinc     15667 May 30 06:49 start_atlas.sh
[2026-05-30 09:49:18] drwxrwx--x. 2 boinc boinc      4096 May 30 06:49 shared
[2026-05-30 09:49:18] -rw-r--r--. 2 boinc boinc    697408 May 30 06:49 input.tar.gz
[2026-05-30 09:49:18] -rw-r--r--. 1 boinc boinc         0 May 30 06:49 boinc_lockfile
[2026-05-30 09:49:18] -rw-r--r--. 1 boinc boinc      2513 May 30 06:49 pandaJob.out
[2026-05-30 09:49:18] -rw-------. 1 boinc boinc    995232 May 30 06:49 agis_schedconf.cvmfs.json
[2026-05-30 09:49:18] -rw-------. 1 boinc boinc   1502789 May 30 06:49 agis_ddmendpoints.agis.ALL.json
[2026-05-30 09:49:18] -rw-------. 1 boinc boinc       448 May 30 06:49 workernode_map.json
[2026-05-30 09:49:18] drwx------. 5 boinc boinc      4096 May 30 06:49 pilot3
[2026-05-30 09:49:18] -rw-------. 1 boinc boinc 246260951 May 30 09:42 HITS.50533940._004256.pool.root.1
[2026-05-30 09:49:18] -rw-r--r--. 1 boinc boinc       486 May 30 09:42 boinc_task_state.xml
[2026-05-30 09:49:18] -rw-------. 1 boinc boinc      1034 May 30 09:43 memory_monitor_summary.json
[2026-05-30 09:49:18] -rw-------. 1 boinc boinc    292226 May 30 09:43 log.50533940._004256.job.log.tgz.1
[2026-05-30 09:49:18] -rw-------. 1 boinc boinc      6426 May 30 09:43 heartbeat_new.json
[2026-05-30 09:49:18] -rw-------. 1 boinc boinc      6317 May 30 09:43 heartbeat.json
[2026-05-30 09:49:18] -rw-------. 1 boinc boinc        95 May 30 09:43 pilot_heartbeat.json
[2026-05-30 09:49:18] -rw-------. 1 boinc boinc      4904 May 30 09:44 pilotlog.txt
[2026-05-30 09:49:18] -rw-------. 1 boinc boinc    986916 May 30 09:44 log.50533940._004256.job.log.1
[2026-05-30 09:49:18] -rw-------. 1 boinc boinc       357 May 30 09:44 output.list
[2026-05-30 09:49:18] -rw-r--r--. 1 boinc boinc       410 May 30 09:44 runtime_log
[2026-05-30 09:49:18] -rw-------. 1 boinc boinc   1300480 May 30 09:44 result.tar.gz
[2026-05-30 09:49:18] -rw-r--r--. 1 boinc boinc      8828 May 30 09:44 runtime_log.err
[2026-05-30 09:49:18] -rw-------. 1 boinc boinc       664 May 30 09:44 1692b560aba6.diag
[2026-05-30 09:49:18] -rw-r--r--. 1 boinc boinc        26 May 30 09:48 wrapper_checkpoint.txt
[2026-05-30 09:49:18] -rw-r--r--. 1 boinc boinc      8192 May 30 09:49 boinc_mmap_file
[2026-05-30 09:49:18] -rw-r--r--. 1 boinc boinc     21059 May 30 09:49 stderr.txt
[2026-05-30 09:49:18] HITS file was successfully produced:
[2026-05-30 09:49:18] -rw-------. 1 boinc boinc 246260951 May 30 09:42 shared/HITS.pool.root.1
[2026-05-30 09:49:18]  *** Contents of shared directory: ***
[2026-05-30 09:49:18] total 543112
[2026-05-30 09:49:18] -rw-r--r--. 2 boinc boinc 307853620 May 30 06:49 ATLAS.root_0
[2026-05-30 09:49:18] -rw-r--r--. 2 boinc boinc     15667 May 30 06:49 start_atlas.sh
[2026-05-30 09:49:18] -rw-r--r--. 2 boinc boinc    697408 May 30 06:49 input.tar.gz
[2026-05-30 09:49:18] -rw-------. 1 boinc boinc 246260951 May 30 09:42 HITS.pool.root.1
[2026-05-30 09:49:18] -rw-------. 1 boinc boinc   1300480 May 30 09:44 result.tar.gz
09:49:20 (3945569): run_atlas exited; CPU time 39576.706395
09:49:20 (3945569): called boinc_finish(0)

</stderr_txt>
]]>

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