Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
03:56:37 (4391): wrapper (7.7.26015): starting
03:56:37 (4391): wrapper: running run_atlas (--nthreads 4)
[2026-05-30 03:56:37] Arguments: --nthreads 4
[2026-05-30 03:56:37] Threads: 4
[2026-05-30 03:56:37] Checking for CVMFS
[2026-05-30 03:56:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-30 03:57:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-30 03:57:03] Running cvmfs_config stat atlas.cern.ch
[2026-05-30 03:57:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-30 03:57:04] 2.11.5.0 4613 0 23552 159952 3 1 2772254 4194305 0 130560 0 0 0.000 1284 688 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2026-05-30 03:57:04] CVMFS is ok
[2026-05-30 03:57:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-30 03:57:04] Checking for apptainer binary...
[2026-05-30 03:57:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-30 03:57:04] Running /usr/bin/apptainer --version
[2026-05-30 03:57:04] apptainer version 1.0.3
[2026-05-30 03:57:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-30 03:57:06] TeeC20
[2026-05-30 03:57:06] apptainer works
[2026-05-30 03:57:06] Set ATHENA_PROC_NUMBER=4
[2026-05-30 03:57:06] Set ATHENA_CORE_NUMBER=4
[2026-05-30 03:57:06] Starting ATLAS job with PandaID=7157917740
[2026-05-30 03:57:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-30 06:40:53]  *** The last 200 lines of the pilot log: ***
[2026-05-30 06:40:53] 2026-05-30 05:40:16,052 | INFO     | output file size check: skipping output file /home/m/BOINC/slots/2/PanDA_Pilot-7157917740/HITS.49545102._021981.pool.root.1 since it does not exist
[2026-05-30 06:40:53] 2026-05-30 05:40:16,086 | INFO     | number of running child processes to parent process 13080: 1
[2026-05-30 06:40:53] 2026-05-30 05:40:16,086 | INFO     | maximum number of monitored processes: 6
[2026-05-30 06:40:53] 2026-05-30 05:40:17,574 | INFO     | job 7157917740 has state=finished
[2026-05-30 06:40:53] 2026-05-30 05:40:17,574 | INFO     | preparing for final server update for job 7157917740 in state='finished'
[2026-05-30 06:40:53] 2026-05-30 05:40:17,575 | INFO     | reading metadata from: /home/m/BOINC/slots/2/PanDA_Pilot-7157917740/jobReport.json
[2026-05-30 06:40:53] 2026-05-30 05:40:17,579 | INFO     | added worker_node to metadata from /home/m/BOINC/slots/2/workernode_map.json
[2026-05-30 06:40:53] 2026-05-30 05:40:17,580 | INFO     | this job has now completed (state=finished)
[2026-05-30 06:40:53] 2026-05-30 05:40:17,580 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-30 06:40:53] 2026-05-30 05:40:17,581 | INFO     | log transfer has been attempted: DONE
[2026-05-30 06:40:53] 2026-05-30 05:40:17,581 | INFO     | job 7157917740 has finished - writing final server update
[2026-05-30 06:40:53] 2026-05-30 05:40:17,582 | INFO     | total number of processed events: 400 (read)
[2026-05-30 06:40:53] 2026-05-30 05:40:17,600 | INFO     | using path: /home/m/BOINC/slots/2/PanDA_Pilot-7157917740/memory_monitor_summary.json (trf name=prmon)
[2026-05-30 06:40:53] 2026-05-30 05:40:17,600 | INFO     | extracted standard info from prmon json
[2026-05-30 06:40:53] 2026-05-30 05:40:17,600 | INFO     | extracted standard memory fields from prmon json
[2026-05-30 06:40:53] 2026-05-30 05:40:17,601 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-30 06:40:53] 2026-05-30 05:40:17,601 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-30 06:40:53] 2026-05-30 05:40:17,604 | INFO     | fitting pss+swap vs Time
[2026-05-30 06:40:53] 2026-05-30 05:40:17,604 | INFO     | sum of square deviations: 1270051720.0
[2026-05-30 06:40:53] 2026-05-30 05:40:17,605 | INFO     | sum of deviations: -5511941761.0
[2026-05-30 06:40:53] 2026-05-30 05:40:17,605 | INFO     | mean x (centered): 0.0
[2026-05-30 06:40:53] 2026-05-30 05:40:17,605 | INFO     | mean y: 2378232.625
[2026-05-30 06:40:53] 2026-05-30 05:40:17,605 | INFO     | intersect: 2378232.625
[2026-05-30 06:40:53] 2026-05-30 05:40:17,605 | INFO     | chi2: 1.6710887410466904
[2026-05-30 06:40:53] 2026-05-30 05:40:17,606 | INFO     | sum of square deviations: 1154663510.0
[2026-05-30 06:40:53] 2026-05-30 05:40:17,607 | INFO     | sum of deviations: -5298555831.000002
[2026-05-30 06:40:53] 2026-05-30 05:40:17,607 | INFO     | mean x (centered): 0.0
[2026-05-30 06:40:53] 2026-05-30 05:40:17,607 | INFO     | mean y: 2378515.7419354836
[2026-05-30 06:40:53] 2026-05-30 05:40:17,607 | INFO     | intersect: 2378515.7419354836
[2026-05-30 06:40:53] 2026-05-30 05:40:17,607 | INFO     | chi2: 1.669898344922006
[2026-05-30 06:40:53] 2026-05-30 05:40:17,607 | INFO     | current chi2=1.669898344922006 (change=0.0712347642255554 %)
[2026-05-30 06:40:53] 2026-05-30 05:40:17,607 | INFO     | right removable region: 154
[2026-05-30 06:40:53] 2026-05-30 05:40:17,607 | INFO     | sum of square deviations: 1154663510.0
[2026-05-30 06:40:53] 2026-05-30 05:40:17,608 | INFO     | sum of deviations: -22581029837.0
[2026-05-30 06:40:53] 2026-05-30 05:40:17,608 | INFO     | mean x (centered): 0.0
[2026-05-30 06:40:53] 2026-05-30 05:40:17,608 | INFO     | mean y: 2400243.4838709678
[2026-05-30 06:40:53] 2026-05-30 05:40:17,608 | INFO     | intersect: 2400243.4838709678
[2026-05-30 06:40:53] 2026-05-30 05:40:17,608 | INFO     | chi2: 0.2619756861483816
[2026-05-30 06:40:53] 2026-05-30 05:40:17,608 | INFO     | current chi2=0.2619756861483816 (change=84.32305360490355 %)
[2026-05-30 06:40:53] 2026-05-30 05:40:17,608 | INFO     | sum of square deviations: 1046484737.5
[2026-05-30 06:40:53] 2026-05-30 05:40:17,609 | INFO     | sum of deviations: -14376976661.999998
[2026-05-30 06:40:53] 2026-05-30 05:40:17,609 | INFO     | mean x (centered): 0.0
[2026-05-30 06:40:53] 2026-05-30 05:40:17,609 | INFO     | mean y: 2388669.1066666665
[2026-05-30 06:40:53] 2026-05-30 05:40:17,609 | INFO     | intersect: 2388669.1066666665
[2026-05-30 06:40:53] 2026-05-30 05:40:17,609 | INFO     | chi2: 0.20425282727763167
[2026-05-30 06:40:53] 2026-05-30 05:40:17,609 | INFO     | current chi2=0.20425282727763167 (change=22.033670268948562 %)
[2026-05-30 06:40:53] 2026-05-30 05:40:17,609 | INFO     | left removable region: 10
[2026-05-30 06:40:53] 2026-05-30 05:40:17,609 | INFO     | sum of square deviations: 925859220.0
[2026-05-30 06:40:53] 2026-05-30 05:40:17,610 | INFO     | sum of deviations: -13827202083.999998
[2026-05-30 06:40:53] 2026-05-30 05:40:17,610 | INFO     | mean x (centered): 0.0
[2026-05-30 06:40:53] 2026-05-30 05:40:17,610 | INFO     | mean y: 2389505.986111111
[2026-05-30 06:40:53] 2026-05-30 05:40:17,610 | INFO     | intersect: 2389505.986111111
[2026-05-30 06:40:53] 2026-05-30 05:40:17,610 | INFO     | chi2: 0.20186308192688868
[2026-05-30 06:40:53] 2026-05-30 05:40:17,610 | INFO     | current memory leak: -14.93 B/s (using 144 data points, chi2=0.20)
[2026-05-30 06:40:53] 2026-05-30 05:40:17,610 | INFO     | could have reported an average CPU frequency of 3292 MHz (9 samples)
[2026-05-30 06:40:53] 2026-05-30 05:40:17,610 | INFO     | ..............................
[2026-05-30 06:40:53] 2026-05-30 05:40:17,611 | INFO     | . Timing measurements:
[2026-05-30 06:40:53] 2026-05-30 05:40:17,611 | INFO     | . get job = 0 s
[2026-05-30 06:40:53] 2026-05-30 05:40:17,611 | INFO     | . initial setup = 5 s
[2026-05-30 06:40:53] 2026-05-30 05:40:17,611 | INFO     | . payload setup = 6 s
[2026-05-30 06:40:53] 2026-05-30 05:40:17,611 | INFO     | . stage-in = 0 s
[2026-05-30 06:40:53] 2026-05-30 05:40:17,611 | INFO     | . payload execution = 9741 s
[2026-05-30 06:40:53] 2026-05-30 05:40:17,611 | INFO     | . stage-out = 0 s
[2026-05-30 06:40:53] 2026-05-30 05:40:17,611 | INFO     | . log creation = 0 s
[2026-05-30 06:40:53] 2026-05-30 05:40:17,611 | INFO     | ..............................
[2026-05-30 06:40:53] 2026-05-30 05:40:18,041 | INFO     | 
[2026-05-30 06:40:53] 2026-05-30 05:40:18,041 | INFO     | job summary report
[2026-05-30 06:40:53] 2026-05-30 05:40:18,041 | INFO     | --------------------------------------------------
[2026-05-30 06:40:53] 2026-05-30 05:40:18,041 | INFO     | PanDA job id: 7157917740
[2026-05-30 06:40:53] 2026-05-30 05:40:18,041 | INFO     | task id: 49545102
[2026-05-30 06:40:53] 2026-05-30 05:40:18,042 | INFO     | errors: (none)
[2026-05-30 06:40:53] 2026-05-30 05:40:18,042 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-30 06:40:53] 2026-05-30 05:40:18,042 | INFO     | pilot state: finished 
[2026-05-30 06:40:53] 2026-05-30 05:40:18,042 | INFO     | transexitcode: 0
[2026-05-30 06:40:53] 2026-05-30 05:40:18,042 | INFO     | exeerrorcode: 0
[2026-05-30 06:40:53] 2026-05-30 05:40:18,042 | INFO     | exeerrordiag: 
[2026-05-30 06:40:53] 2026-05-30 05:40:18,043 | INFO     | exitcode: 0
[2026-05-30 06:40:53] 2026-05-30 05:40:18,043 | INFO     | exitmsg: OK
[2026-05-30 06:40:53] 2026-05-30 05:40:18,043 | INFO     | cpuconsumptiontime: 37848 s
[2026-05-30 06:40:53] 2026-05-30 05:40:18,043 | INFO     | nevents: 400
[2026-05-30 06:40:53] 2026-05-30 05:40:18,043 | INFO     | neventsw: 0
[2026-05-30 06:40:53] 2026-05-30 05:40:18,043 | INFO     | pid: 13080
[2026-05-30 06:40:53] 2026-05-30 05:40:18,044 | INFO     | pgrp: 13080
[2026-05-30 06:40:53] 2026-05-30 05:40:18,044 | INFO     | corecount: 4
[2026-05-30 06:40:53] 2026-05-30 05:40:18,044 | INFO     | event service: False
[2026-05-30 06:40:53] 2026-05-30 05:40:18,044 | INFO     | sizes: {0: 2248047, 1: 2267635, 11: 2267663, 9751: 2296170, 9752: 2305166, 9753: 2305222, 9755: 2305636}
[2026-05-30 06:40:53] 2026-05-30 05:40:18,044 | INFO     | --------------------------------------------------
[2026-05-30 06:40:53] 2026-05-30 05:40:18,044 | INFO     | 
[2026-05-30 06:40:53] 2026-05-30 05:40:18,045 | INFO     | executing command: ls -lF /home/m/BOINC/slots/2
[2026-05-30 06:40:53] 2026-05-30 05:40:18,059 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-30 06:40:53] 2026-05-30 05:40:18,059 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-30 06:40:53] 2026-05-30 05:40:18,059 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-30 06:40:53] 2026-05-30 05:40:18,059 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-30 06:40:53] 2026-05-30 05:40:18,059 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-30 06:40:53] 2026-05-30 05:40:18,059 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-30 06:40:53] 2026-05-30 05:40:18,059 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-30 06:40:53] 2026-05-30 05:40:18,059 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-30 06:40:53] 2026-05-30 05:40:18,059 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-30 06:40:53] 2026-05-30 05:40:18,059 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-30 06:40:53] 2026-05-30 05:40:18,059 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-30 06:40:53] 2026-05-30 05:40:18,059 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-30 06:40:53] 2026-05-30 05:40:18,060 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-30 06:40:53] 2026-05-30 05:40:18,060 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-30 06:40:53] 2026-05-30 05:40:18,060 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-30 06:40:53] 2026-05-30 05:40:18,060 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-30 06:40:53] 2026-05-30 05:40:18,060 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-30 06:40:53] 2026-05-30 05:40:18,060 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-30 06:40:53] 2026-05-30 05:40:18,060 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-30 06:40:53] 2026-05-30 05:40:18,060 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-30 06:40:53] 2026-05-30 05:40:18,060 | INFO     | job 7157917740 has completed (purged errors)
[2026-05-30 06:40:53] 2026-05-30 05:40:18,060 | INFO     | overall cleanup function is called
[2026-05-30 06:40:53] 2026-05-30 05:40:18,745 | INFO     | PID=8696 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-05-30 06:40:53] 2026-05-30 05:40:19,066 | INFO     | --- collectZombieJob: --- 10, [13080]
[2026-05-30 06:40:53] 2026-05-30 05:40:19,067 | INFO     | zombie collector waiting for pid 13080
[2026-05-30 06:40:53] 2026-05-30 05:40:19,067 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-30 06:40:53] 2026-05-30 05:40:19,067 | INFO     | collected zombie processes
[2026-05-30 06:40:53] 2026-05-30 05:40:19,067 | INFO     | will attempt to kill all subprocesses of pid=13080
[2026-05-30 06:40:53] 2026-05-30 05:40:19,109 | INFO     | process IDs to be killed: [13080] (in reverse order)
[2026-05-30 06:40:53] 2026-05-30 05:40:19,128 | WARNING  | found no corresponding commands to process id(s)
[2026-05-30 06:40:53] 2026-05-30 05:40:19,128 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-30 06:40:53] 2026-05-30 05:40:19,129 | INFO     | did not find any defunct processes belonging to 13080
[2026-05-30 06:40:53] 2026-05-30 05:40:19,130 | INFO     | did not find any defunct processes belonging to 13080
[2026-05-30 06:40:53] 2026-05-30 05:40:19,130 | INFO     | Ready for new job
[2026-05-30 06:40:53] 2026-05-30 05:40:19,131 | INFO     | ***************************************
[2026-05-30 06:40:53] 2026-05-30 05:40:19,131 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-30 06:40:53] 2026-05-30 05:40:19,131 | INFO     | ***************************************
[2026-05-30 06:40:53] 2026-05-30 05:40:19,131 | INFO     | 
[2026-05-30 06:40:53] 2026-05-30 05:40:19,151 | INFO     | architecture information:
[2026-05-30 06:40:53] 2026-05-30 05:40:19,151 | INFO     | executing command: cat /etc/os-release
[2026-05-30 06:40:53] 2026-05-30 05:40:19,157 | INFO     | cat /etc/os-release:
[2026-05-30 06:40:53] NAME="CentOS Linux"
[2026-05-30 06:40:53] VERSION="7 (Core)"
[2026-05-30 06:40:53] ID="centos"
[2026-05-30 06:40:53] ID_LIKE="rhel fedora"
[2026-05-30 06:40:53] VERSION_ID="7"
[2026-05-30 06:40:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-30 06:40:53] ANSI_COLOR="0;31"
[2026-05-30 06:40:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-30 06:40:53] HOME_URL="https://www.centos.org/"
[2026-05-30 06:40:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-30 06:40:53] 
[2026-05-30 06:40:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-30 06:40:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-30 06:40:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-30 06:40:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-30 06:40:53] 
[2026-05-30 06:40:53] 2026-05-30 05:40:19,157 | INFO     | ***************************************
[2026-05-30 06:40:53] 2026-05-30 05:40:19,660 | INFO     | executing command: df -mP /home/m/BOINC/slots/2
[2026-05-30 06:40:53] 2026-05-30 05:40:19,673 | INFO     | sufficient remaining disk space (418841100288 B)
[2026-05-30 06:40:53] 2026-05-30 05:40:19,673 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-30 06:40:53] 2026-05-30 05:40:19,674 | INFO     | current server update state: UPDATING_FINAL
[2026-05-30 06:40:53] 2026-05-30 05:40:19,674 | INFO     | update_server=False
[2026-05-30 06:40:53] 2026-05-30 05:40:19,674 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-30 06:40:53] 2026-05-30 05:40:19,674 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-05-30 06:40:53] 2026-05-30 05:40:19,674 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-30 06:40:53] 2026-05-30 05:40:19,674 | INFO     | found 0 job(s) in 20 queues
[2026-05-30 06:40:53] 2026-05-30 05:40:19,674 | INFO     | aborting loop
[2026-05-30 06:40:53] 2026-05-30 05:40:19,674 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-30 06:40:53] 2026-05-30 05:40:19,675 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-30 06:40:53] 2026-05-30 05:40:19,754 | INFO     | all payload control threads have been joined
[2026-05-30 06:40:53] 2026-05-30 05:40:20,051 | INFO     | all data control threads have been joined
[2026-05-30 06:40:53] 2026-05-30 05:40:20,264 | INFO     | all job control threads have been joined
[2026-05-30 06:40:53] 2026-05-30 05:40:20,289 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-30 06:40:53] 2026-05-30 05:40:20,677 | INFO     | [job] job monitor thread has finished
[2026-05-30 06:40:53] 2026-05-30 05:40:20,679 | INFO     | [job] retrieve thread has finished
[2026-05-30 06:40:53] 2026-05-30 05:40:20,695 | INFO     | [payload] failed_post thread has finished
[2026-05-30 06:40:53] 2026-05-30 05:40:20,760 | INFO     | [payload] control thread has finished
[2026-05-30 06:40:53] 2026-05-30 05:40:20,937 | INFO     | [job] validate thread has finished
[2026-05-30 06:40:53] 2026-05-30 05:40:21,057 | INFO     | [data] control thread has finished
[2026-05-30 06:40:53] 2026-05-30 05:40:21,238 | INFO     | [payload] execute_payloads thread has finished
[2026-05-30 06:40:53] 2026-05-30 05:40:21,270 | INFO     | [job] control thread has finished
[2026-05-30 06:40:53] 2026-05-30 05:40:21,371 | INFO     | [data] copytool_in thread has finished
[2026-05-30 06:40:53] 2026-05-30 05:40:21,397 | INFO     | [payload] validate_pre thread has finished
[2026-05-30 06:40:53] 2026-05-30 05:40:21,401 | INFO     | [job] create_data_payload thread has finished
[2026-05-30 06:40:53] 2026-05-30 05:40:21,653 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-30 06:40:53] 2026-05-30 05:40:21,797 | INFO     | [payload] validate_post thread has finished
[2026-05-30 06:40:53] 2026-05-30 05:40:22,294 | INFO     | [data] copytool_out thread has finished
[2026-05-30 06:40:53] 2026-05-30 05:40:22,663 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-30 06:40:53] 2026-05-30 05:40:23,669 | INFO     | [job] queue monitor thread has finished
[2026-05-30 06:40:53] 2026-05-30 05:40:25,659 | INFO     | [data] queue_monitor thread has finished
[2026-05-30 06:40:53] 2026-05-30 05:40:29,977 | INFO     | job.realtimelogging is not enabled
[2026-05-30 06:40:53] 2026-05-30 05:40:30,982 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-30 06:40:53] 2026-05-30 05:40:47,408 | INFO     | [monitor] cgroup control has ended
[2026-05-30 06:40:53] 2026-05-30 05:40:48,414 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140437619820352)>', '<ExcThread(monitor, started 140437335549696)>']
[2026-05-30 06:40:53] 2026-05-30 05:40:48,817 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-30 06:40:53] 2026-05-30 05:40:48,817 | INFO     | [monitor] control thread has ended
[2026-05-30 06:40:53] 2026-05-30 05:40:53,419 | INFO     | all workflow threads have been joined
[2026-05-30 06:40:53] 2026-05-30 05:40:53,420 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-30 06:40:53] 2026-05-30 05:40:53,420 | INFO     | traces error code: 0
[2026-05-30 06:40:53] 2026-05-30 05:40:53,421 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-30 06:40:53] 2026-05-30 05:40:53,512 [wrapper] ==== pilot stdout END ====
[2026-05-30 06:40:53] 2026-05-30 05:40:53,513 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-30 06:40:53] 2026-05-30 05:40:53,514 [wrapper] pilotpid: 8696
[2026-05-30 06:40:53] 2026-05-30 05:40:53,515 [wrapper] Pilot exit status: 0
[2026-05-30 06:40:53] 2026-05-30 05:40:53,536 [wrapper] pandaids: 7157917740
[2026-05-30 06:40:53] 2026-05-30 05:40:53,546 [wrapper] cleanup supervisor_pilot 18615 8697
[2026-05-30 06:40:53] 2026-05-30 05:40:53,547 [wrapper] Test setup, not cleaning
[2026-05-30 06:40:53] 2026-05-30 05:40:53,548 [wrapper] apfmon messages muted
[2026-05-30 06:40:53] 2026-05-30 05:40:53,549 [wrapper] ==== wrapper stdout END ====
[2026-05-30 06:40:53] 2026-05-30 05:40:53,550 [wrapper] ==== wrapper stderr END ====
[2026-05-30 06:40:53]  *** Error codes and diagnostics ***
[2026-05-30 06:40:53]     "exeErrorCode": 0,
[2026-05-30 06:40:53]     "pilotErrorCode": 0,
[2026-05-30 06:40:53]  *** Listing of results directory ***
[2026-05-30 06:40:53] total 433692
[2026-05-30 06:40:53] -rw-r--r-- 1 m m      5631 May 29 23:41 queuedata.json
[2026-05-30 06:40:53] -rw-r--r-- 1 m m    683926 May 29 23:41 pilot3.tar.gz
[2026-05-30 06:40:53] -rwx------ 1 m m     36281 May 29 23:41 runpilot2-wrapper.sh
[2026-05-30 06:40:53] -rw-rw-r-- 1 m m       100 May 30 03:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-30 06:40:53] -rwxr-xr-x 1 m m      7986 May 30 03:56 run_atlas
[2026-05-30 06:40:53] -rw-rw-r-- 1 m m       105 May 30 03:56 job.xml
[2026-05-30 06:40:53] -rw-r--r-- 2 m m     15667 May 30 03:56 start_atlas.sh
[2026-05-30 06:40:53] drwxrwx--x 2 m m      4096 May 30 03:56 shared
[2026-05-30 06:40:53] -rw-r--r-- 2 m m    697423 May 30 03:56 input.tar.gz
[2026-05-30 06:40:53] -rw-rw-r-- 1 m m      5796 May 30 03:56 init_data.xml
[2026-05-30 06:40:53] -rw-r--r-- 2 m m 264185492 May 30 03:56 EVNT.49539563._000872.pool.root.1
[2026-05-30 06:40:53] -rw-rw-r-- 1 m m         0 May 30 03:56 boinc_lockfile
[2026-05-30 06:40:53] -rw-rw-r-- 1 m m      2568 May 30 03:57 pandaJob.out
[2026-05-30 06:40:53] -rw------- 1 m m    995579 May 30 03:57 agis_schedconf.cvmfs.json
[2026-05-30 06:40:53] -rw------- 1 m m   1502789 May 30 03:57 agis_ddmendpoints.agis.ALL.json
[2026-05-30 06:40:53] -rw------- 1 m m       416 May 30 03:57 workernode_map.json
[2026-05-30 06:40:53] drwx------ 5 m m      4096 May 30 03:57 pilot3
[2026-05-30 06:40:53] -rw------- 1 m m        95 May 30 06:39 pilot_heartbeat.json
[2026-05-30 06:40:53] -rw------- 1 m m 173424130 May 30 06:39 HITS.49545102._021981.pool.root.1
[2026-05-30 06:40:53] -rw-rw-r-- 1 m m       487 May 30 06:40 boinc_task_state.xml
[2026-05-30 06:40:53] -rw------- 1 m m      1028 May 30 06:40 memory_monitor_summary.json
[2026-05-30 06:40:53] -rw------- 1 m m    274642 May 30 06:40 log.49545102._021981.job.log.tgz.1
[2026-05-30 06:40:53] -rw------- 1 m m      6340 May 30 06:40 heartbeat_new.json
[2026-05-30 06:40:53] -rw------- 1 m m      6231 May 30 06:40 heartbeat.json
[2026-05-30 06:40:53] -rw-rw-r-- 1 m m        27 May 30 06:40 wrapper_checkpoint.txt
[2026-05-30 06:40:53] -rw-rw-r-- 1 m m      8192 May 30 06:40 boinc_mmap_file
[2026-05-30 06:40:53] -rw------- 1 m m      4623 May 30 06:40 pilotlog.txt
[2026-05-30 06:40:53] -rw------- 1 m m    906131 May 30 06:40 log.49545102._021981.job.log.1
[2026-05-30 06:40:53] -rw-rw-r-- 1 m m       410 May 30 06:40 runtime_log
[2026-05-30 06:40:53] -rw------- 1 m m   1198080 May 30 06:40 result.tar.gz
[2026-05-30 06:40:53] -rw------- 1 m m       357 May 30 06:40 output.list
[2026-05-30 06:40:53] -rw-rw-r-- 1 m m      8351 May 30 06:40 runtime_log.err
[2026-05-30 06:40:53] -rw------- 1 m m       642 May 30 06:40 1636d933cfd5.diag
[2026-05-30 06:40:53] -rw-rw-r-- 1 m m     20893 May 30 06:40 stderr.txt
[2026-05-30 06:40:53] HITS file was successfully produced:
[2026-05-30 06:40:53] -rw------- 1 m m 173424130 May 30 06:39 shared/HITS.pool.root.1
[2026-05-30 06:40:53]  *** Contents of shared directory: ***
[2026-05-30 06:40:53] total 429236
[2026-05-30 06:40:53] -rw-r--r-- 2 m m     15667 May 30 03:56 start_atlas.sh
[2026-05-30 06:40:53] -rw-r--r-- 2 m m    697423 May 30 03:56 input.tar.gz
[2026-05-30 06:40:53] -rw-r--r-- 2 m m 264185492 May 30 03:56 ATLAS.root_0
[2026-05-30 06:40:53] -rw------- 1 m m 173424130 May 30 06:39 HITS.pool.root.1
[2026-05-30 06:40:53] -rw------- 1 m m   1198080 May 30 06:40 result.tar.gz
06:40:55 (4391): run_atlas exited; CPU time 37947.298349
06:40:55 (4391): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN