Name f4fc4aa68c2c_0
Workunit 241679767
Created 29 May 2026, 20:22:05 UTC
Sent 30 May 2026, 1:33:24 UTC
Report deadline 7 Jun 2026, 1:33:24 UTC
Received 30 May 2026, 2:42:42 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 10823079
Run time 3 min 18 sec
CPU time 16 sec
Priority 28
Validate state Invalid
Credit 0.00
Device peak FLOPS 104.12 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 888.35 MB
Peak swap size 1.59 GB
Peak disk usage 539.74 MB

Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
04:34:58 (157860): wrapper (7.7.26015): starting
04:34:58 (157860): wrapper: running run_atlas (--nthreads 12)
[2026-05-30 04:34:58] Arguments: --nthreads 12
[2026-05-30 04:34:58] Threads: 12
[2026-05-30 04:34:58] Checking for CVMFS
[2026-05-30 04:34:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-30 04:34:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-30 04:34:58] Running cvmfs_config stat atlas.cern.ch
[2026-05-30 04:34:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-30 04:34:58] 2.13.1.0 2378814 249 48444 159952 0 186 2634109 4194304 0 130560 0 8269701 100.000 10880 719 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch DIRECT 1
[2026-05-30 04:34:58] CVMFS is ok
[2026-05-30 04:34:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-30 04:34:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-30 04:34:58] Small home clusters do not require a local http proxy but it is suggested if
[2026-05-30 04:34:58] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-05-30 04:34:58] Further information can be found at the LHC@home message board.
[2026-05-30 04:34:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-30 04:34:58] Checking for apptainer binary...
[2026-05-30 04:34:58] apptainer is not installed, using version from CVMFS
[2026-05-30 04:34:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-30 04:34:58] apptainer isnt working: ERROR  : Could not write info to setgroups: Permission denied
[2026-05-30 04:34:58] ERROR  : Error while waiting event for user namespace mappings: no event received
[2026-05-30 04:34:58] 
[2026-05-30 04:34:58] Falling back to singularity found in PATH at /usr/bin/singularity
[2026-05-30 04:34:58] WARNING: singularity support will be removed in a future version of native ATLAS
[2026-05-30 04:34:58] Please install apptainer instead following the instructions at https://apptainer.org/docs/admin/main/installation.html
[2026-05-30 04:34:58] Checking singularity works with /usr/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-30 04:34:58] singularity works
[2026-05-30 04:34:58] Set ATHENA_PROC_NUMBER=12
[2026-05-30 04:34:58] Set ATHENA_CORE_NUMBER=12
[2026-05-30 04:34:58] Starting ATLAS job with PandaID=7159019547
[2026-05-30 04:34:58] Running command: /usr/bin/singularity exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-30 04:38:12]  *** The last 200 lines of the pilot log: ***
[2026-05-30 04:38:12] 2026-05-30 02:37:40,501 | WARNING  | wrong length of table data, x=[1780108524.0], y=[10203.0] (must be same and length>=4)
[2026-05-30 04:38:12] 2026-05-30 02:37:40,501 | INFO     | could have reported an average CPU frequency of 3589 MHz (4 samples)
[2026-05-30 04:38:12] 2026-05-30 02:37:40,501 | INFO     | ..............................
[2026-05-30 04:38:12] 2026-05-30 02:37:40,502 | INFO     | . Timing measurements:
[2026-05-30 04:38:12] 2026-05-30 02:37:40,502 | INFO     | . get job = 0 s
[2026-05-30 04:38:12] 2026-05-30 02:37:40,502 | INFO     | . initial setup = 3 s
[2026-05-30 04:38:12] 2026-05-30 02:37:40,502 | INFO     | . payload setup = 4 s
[2026-05-30 04:38:12] 2026-05-30 02:37:40,502 | INFO     | . stage-in = 0 s
[2026-05-30 04:38:12] 2026-05-30 02:37:40,502 | INFO     | . payload execution = 20 s
[2026-05-30 04:38:12] 2026-05-30 02:37:40,502 | INFO     | . stage-out = 0 s
[2026-05-30 04:38:12] 2026-05-30 02:37:40,502 | INFO     | . log creation = 0 s
[2026-05-30 04:38:12] 2026-05-30 02:37:40,502 | INFO     | ..............................
[2026-05-30 04:38:12] 2026-05-30 02:37:40,502 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-30 04:38:12] 2026-05-30 02:37:40,502 | INFO     | executing command: tail -n 20 /var/lib/boinc-client/slots/1/PanDA_Pilot-7159019547/pilotlog.txt
[2026-05-30 04:38:12] 2026-05-30 02:37:40,511 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-05-30 04:38:12] - Log from pilotlog.txt -
[2026-05-30 04:38:12] 2026-05-30 02:37:40,501 | INFO     | extracted standard info from prmon json
[2026-05-30 04:38:12] 2026-05-30 02:37:40,501 | INFO     | extracted standard memory fields from prmon json
[2026-05-30 04:38:12] 2026-05-30 02:37:40,501 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-30 04:38:12] 2026-05-30 02:37:40,501 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-30 04:38:12] 2026-05-30 02:37:40,501 | WARNING  | found no stored workdir sizes
[2026-05-30 04:38:12] 2026-05-30 02:37:40,501 | INFO     | will not add max space = 0 B to job metrics
[2026-05-30 04:38:12] 2026-05-30 02:37:40,501 | WARNING  | wrong length of table data, x=[1780108524.0], y=[10203.0] (must be same and length>=4)
[2026-05-30 04:38:12] 2026-05-30 02:37:40,501 | INFO     | could have reported an average CPU frequency of 3589 MHz (4 samples)
[2026-05-30 04:38:12] 2026-05-30 02:37:40,501 | INFO     | ..............................
[2026-05-30 04:38:12] 2026-05-30 02:37:40,502 | INFO     | . Timing measurements:
[2026-05-30 04:38:12] 2026-05-30 02:37:40,502 | INFO     | . get job = 0 s
[2026-05-30 04:38:12] 2026-05-30 02:37:40,502 | INFO     | . initial setup = 3 s
[2026-05-30 04:38:12] 2026-05-30 02:37:40,502 | INFO     | . payload setup = 4 s
[2026-05-30 04:38:12] 2026-05-30 02:37:40,502 | INFO     | . stage-in = 0 s
[2026-05-30 04:38:12] 2026-05-30 02:37:40,502 | INFO     | . payload execution = 20 s
[2026-05-30 04:38:12] 2026-05-30 02:37:40,502 | INFO     | . stage-out = 0 s
[2026-05-30 04:38:12] 2026-05-30 02:37:40,502 | INFO     | . log creation = 0 s
[2026-05-30 04:38:12] 2026-05-30 02:37:40,502 | INFO     | ..............................
[2026-05-30 04:38:12] 2026-05-30 02:37:40,502 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-30 04:38:12] 2026-05-30 02:37:40,502 | INFO     | executing command: tail -n 20 /var/lib/boinc-client/slots/1/PanDA_Pilot-7159019547/pilotlog.txt
[2026-05-30 04:38:12] 2026-05-30 02:37:40,512 | WARNING  | 
[2026-05-30 04:38:12] [begin log extracts]
[2026-05-30 04:38:12] - Log from pilotlog.txt -
[2026-05-30 04:38:12] 2026-05-30 02:37:40,501 | INFO     | extracted standard info from prmon json
[2026-05-30 04:38:12] 2026-05-30 02:37:40,501 | INFO     | extracted standard memory fields from prmon json
[2026-05-30 04:38:12] 2026-05-30 02:37:40,501 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-30 04:38:12] 2026-05-30 02:37:40,501 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-30 04:38:12] 2026-05-30 02:37:40,501 | WARNING  | found no stored workdir sizes
[2026-05-30 04:38:12] 2026-05-30 02:37:40,501 | INFO     | will not add max space = 0 B to job metrics
[2026-05-30 04:38:12] 2026-05-30 02:37:40,501 | WARNING  | wrong length of table data, x=[1780108524.0], y=[10203.0] (must be same and length>=4)
[2026-05-30 04:38:12] 2026-05-30 02:37:40,501 | INFO     | could have reported an average CPU frequency of 3589 MHz (4 samples)
[2026-05-30 04:38:12] 2026-05-30 02:37:40,501 | INFO     | ..............................
[2026-05-30 04:38:12] 2026-05-30 02:37:40,502 | INFO     | . Timing measurements:
[2026-05-30 04:38:12] 2026-05-30 02:37:40,502 | INFO     | . get job = 0 s
[2026-05-30 04:38:12] 2026-05-30 02:37:40,502 | INFO     | . initial setup = 3 s
[2026-05-30 04:38:12] 2026-05-30 02:37:40,502 | INFO     | . payload setup = 4 s
[2026-05-30 04:38:12] 2026-05-30 02:37:40,502 | INFO     | . stage-in = 0 s
[2026-05-30 04:38:12] 2026-05-30 02:37:40,502 | INFO     | . payload execution = 20 s
[2026-05-30 04:38:12] 2026-05-30 02:37:40,502 | INFO     | . stage-out = 0 s
[2026-05-30 04:38:12] 2026-05-30 02:37:40,502 | INFO     | . log creation = 0 s
[2026-05-30 04:38:12] 2026-05-30 02:37:40,502 | INFO     | ..............................
[2026-05-30 04:38:12] 2026-05-30 02:37:40,502 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-05-30 04:38:12] 2026-05-30 02:37:40,502 | INFO     | executing command: tail -n 20 /var/lib/boinc-client/slots/1/PanDA_Pilot-7159019547/pilotlog.txt
[2026-05-30 04:38:12] [end log extracts]
[2026-05-30 04:38:12] 2026-05-30 02:37:40,512 | WARNING  | pilot_error_code(s) = [1305] (will report primary/first error code)
[2026-05-30 04:38:12] 2026-05-30 02:37:40,512 | WARNING  | pilot_error_diag(s) = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero retu
[2026-05-30 04:38:12] 2026-05-30 02:37:40,540 | INFO     | PID=164335 has CPU usage=0.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-05-30 04:38:12] 2026-05-30 02:37:40,540 | INFO     | .. there are 2 such processes running
[2026-05-30 04:38:12] 2026-05-30 02:37:40,994 | INFO     | 
[2026-05-30 04:38:12] 2026-05-30 02:37:40,994 | INFO     | job summary report
[2026-05-30 04:38:12] 2026-05-30 02:37:40,994 | INFO     | --------------------------------------------------
[2026-05-30 04:38:12] 2026-05-30 02:37:40,995 | INFO     | PanDA job id: 7159019547
[2026-05-30 04:38:12] 2026-05-30 02:37:40,995 | INFO     | task id: 49545130
[2026-05-30 04:38:12] 2026-05-30 02:37:40,995 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-05-30 04:35:37,621 CRITICAL Transform executor raised TransformValidationExceptio
[2026-05-30 04:38:12] 2026-05-30 02:37:40,995 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-30 04:38:12] 2026-05-30 02:37:40,995 | INFO     | pilot state: failed 
[2026-05-30 04:38:12] 2026-05-30 02:37:40,995 | INFO     | transexitcode: 65
[2026-05-30 04:38:12] 2026-05-30 02:37:40,995 | INFO     | exeerrorcode: 65
[2026-05-30 04:38:12] 2026-05-30 02:37:40,995 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: "Py:ComponentAccumulator   ERROR This ComponentAccumulator was never merge
[2026-05-30 04:38:12] 2026-05-30 02:37:40,995 | INFO     | exitcode: 65
[2026-05-30 04:38:12] 2026-05-30 02:37:40,995 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: "Py:ComponentAccumulator   ERROR This ComponentAccumulator was never merged!"
[2026-05-30 04:38:12] 2026-05-30 02:37:40,995 | INFO     | cpuconsumptiontime: 17 s
[2026-05-30 04:38:12] 2026-05-30 02:37:40,995 | INFO     | nevents: 0
[2026-05-30 04:38:12] 2026-05-30 02:37:40,995 | INFO     | neventsw: 0
[2026-05-30 04:38:12] 2026-05-30 02:37:40,995 | INFO     | pid: 174709
[2026-05-30 04:38:12] 2026-05-30 02:37:40,995 | INFO     | pgrp: 174709
[2026-05-30 04:38:12] 2026-05-30 02:37:40,995 | INFO     | corecount: 12
[2026-05-30 04:38:12] 2026-05-30 02:37:40,995 | INFO     | event service: False
[2026-05-30 04:38:12] 2026-05-30 02:37:40,995 | INFO     | sizes: {0: 2267695, 11: 2267695, 27: 2293787, 28: 2298117, 143: 2298255}
[2026-05-30 04:38:12] 2026-05-30 02:37:40,995 | INFO     | --------------------------------------------------
[2026-05-30 04:38:12] 2026-05-30 02:37:40,995 | INFO     | 
[2026-05-30 04:38:12] 2026-05-30 02:37:40,995 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2026-05-30 04:38:12] 2026-05-30 02:37:41,006 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-30 04:38:12] 2026-05-30 02:37:41,006 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-30 04:38:12] 2026-05-30 02:37:41,006 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-30 04:38:12] 2026-05-30 02:37:41,006 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-30 04:38:12] 2026-05-30 02:37:41,006 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-30 04:38:12] 2026-05-30 02:37:41,006 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-30 04:38:12] 2026-05-30 02:37:41,006 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-30 04:38:12] 2026-05-30 02:37:41,006 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-30 04:38:12] 2026-05-30 02:37:41,006 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-30 04:38:12] 2026-05-30 02:37:41,007 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-30 04:38:12] 2026-05-30 02:37:41,007 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-30 04:38:12] 2026-05-30 02:37:41,007 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-30 04:38:12] 2026-05-30 02:37:41,007 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-30 04:38:12] 2026-05-30 02:37:41,007 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-30 04:38:12] 2026-05-30 02:37:41,007 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-30 04:38:12] 2026-05-30 02:37:41,007 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-30 04:38:12] 2026-05-30 02:37:41,007 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-30 04:38:12] 2026-05-30 02:37:41,007 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-30 04:38:12] 2026-05-30 02:37:41,007 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-30 04:38:12] 2026-05-30 02:37:41,007 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-30 04:38:12] 2026-05-30 02:37:41,007 | INFO     | job 7159019547 has completed (purged errors)
[2026-05-30 04:38:12] 2026-05-30 02:37:41,007 | INFO     | overall cleanup function is called
[2026-05-30 04:38:12] 2026-05-30 02:37:42,009 | INFO     | --- collectZombieJob: --- 10, [174709]
[2026-05-30 04:38:12] 2026-05-30 02:37:42,009 | INFO     | zombie collector waiting for pid 174709
[2026-05-30 04:38:12] 2026-05-30 02:37:42,009 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-30 04:38:12] 2026-05-30 02:37:42,009 | INFO     | collected zombie processes
[2026-05-30 04:38:12] 2026-05-30 02:37:42,009 | INFO     | will attempt to kill all subprocesses of pid=174709
[2026-05-30 04:38:12] 2026-05-30 02:37:42,048 | INFO     | process IDs to be killed: [174709] (in reverse order)
[2026-05-30 04:38:12] 2026-05-30 02:37:42,076 | WARNING  | found no corresponding commands to process id(s)
[2026-05-30 04:38:12] 2026-05-30 02:37:42,076 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-30 04:38:12] 2026-05-30 02:37:42,078 | INFO     | did not find any defunct processes belonging to 174709
[2026-05-30 04:38:12] 2026-05-30 02:37:42,080 | INFO     | did not find any defunct processes belonging to 174709
[2026-05-30 04:38:12] 2026-05-30 02:37:42,080 | INFO     | Ready for new job
[2026-05-30 04:38:12] 2026-05-30 02:37:42,080 | INFO     | ***************************************
[2026-05-30 04:38:12] 2026-05-30 02:37:42,080 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-30 04:38:12] 2026-05-30 02:37:42,080 | INFO     | ***************************************
[2026-05-30 04:38:12] 2026-05-30 02:37:42,080 | INFO     | 
[2026-05-30 04:38:12] 2026-05-30 02:37:42,081 | INFO     | architecture information:
[2026-05-30 04:38:12] 2026-05-30 02:37:42,081 | INFO     | executing command: cat /etc/os-release
[2026-05-30 04:38:12] 2026-05-30 02:37:42,089 | INFO     | cat /etc/os-release:
[2026-05-30 04:38:12] NAME="CentOS Linux"
[2026-05-30 04:38:12] VERSION="7 (Core)"
[2026-05-30 04:38:12] ID="centos"
[2026-05-30 04:38:12] ID_LIKE="rhel fedora"
[2026-05-30 04:38:12] VERSION_ID="7"
[2026-05-30 04:38:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-30 04:38:12] ANSI_COLOR="0;31"
[2026-05-30 04:38:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-30 04:38:12] HOME_URL="https://www.centos.org/"
[2026-05-30 04:38:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-30 04:38:12] 
[2026-05-30 04:38:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-30 04:38:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-30 04:38:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-30 04:38:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-30 04:38:12] 
[2026-05-30 04:38:12] 2026-05-30 02:37:42,089 | INFO     | ***************************************
[2026-05-30 04:38:12] 2026-05-30 02:37:42,592 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-05-30 04:38:12] 2026-05-30 02:37:42,601 | INFO     | sufficient remaining disk space (51550093312 B)
[2026-05-30 04:38:12] 2026-05-30 02:37:42,601 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-30 04:38:12] 2026-05-30 02:37:42,601 | INFO     | current server update state: UPDATING_FINAL
[2026-05-30 04:38:12] 2026-05-30 02:37:42,601 | INFO     | update_server=False
[2026-05-30 04:38:12] 2026-05-30 02:37:42,601 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-30 04:38:12] 2026-05-30 02:37:42,647 | INFO     | all data control threads have been joined
[2026-05-30 04:38:12] 2026-05-30 02:37:42,774 | INFO     | all job control threads have been joined
[2026-05-30 04:38:12] 2026-05-30 02:37:42,831 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-30 04:38:12] 2026-05-30 02:37:42,831 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-30 04:38:12] 2026-05-30 02:37:42,831 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-30 04:38:12] 2026-05-30 02:37:42,831 | INFO     | will abort loop
[2026-05-30 04:38:12] 2026-05-30 02:37:42,956 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-30 04:38:12] 2026-05-30 02:37:43,435 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-30 04:38:12] 2026-05-30 02:37:43,606 | INFO     | [job] retrieve thread has finished
[2026-05-30 04:38:12] 2026-05-30 02:37:43,613 | INFO     | [job] create_data_payload thread has finished
[2026-05-30 04:38:12] 2026-05-30 02:37:43,652 | INFO     | [data] control thread has finished
[2026-05-30 04:38:12] 2026-05-30 02:37:43,670 | INFO     | [payload] validate_pre thread has finished
[2026-05-30 04:38:12] 2026-05-30 02:37:43,765 | INFO     | [data] copytool_in thread has finished
[2026-05-30 04:38:12] 2026-05-30 02:37:43,779 | INFO     | [job] control thread has finished
[2026-05-30 04:38:12] 2026-05-30 02:37:43,794 | INFO     | [payload] validate_post thread has finished
[2026-05-30 04:38:12] 2026-05-30 02:37:43,836 | INFO     | [job] job monitor thread has finished
[2026-05-30 04:38:12] 2026-05-30 02:37:43,880 | INFO     | all payload control threads have been joined
[2026-05-30 04:38:12] 2026-05-30 02:37:44,199 | INFO     | [payload] execute_payloads thread has finished
[2026-05-30 04:38:12] 2026-05-30 02:37:44,276 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-30 04:38:12] 2026-05-30 02:37:44,308 | INFO     | [payload] failed_post thread has finished
[2026-05-30 04:38:12] 2026-05-30 02:37:44,886 | INFO     | [payload] control thread has finished
[2026-05-30 04:38:12] 2026-05-30 02:37:44,960 | INFO     | [data] copytool_out thread has finished
[2026-05-30 04:38:12] 2026-05-30 02:37:45,047 | INFO     | [job] validate thread has finished
[2026-05-30 04:38:12] 2026-05-30 02:37:45,551 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-30 04:38:12] 2026-05-30 02:37:46,553 | INFO     | [job] queue monitor thread has finished
[2026-05-30 04:38:12] 2026-05-30 02:37:47,440 | INFO     | [data] queue_monitor thread has finished
[2026-05-30 04:38:12] 2026-05-30 02:38:05,938 | INFO     | [monitor] cgroup control has ended
[2026-05-30 04:38:12] 2026-05-30 02:38:07,159 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137879523063616)>', '<ExcThread(monitor, started 137878894003968)>']
[2026-05-30 04:38:12] 2026-05-30 02:38:12,184 | INFO     | all workflow threads have been joined
[2026-05-30 04:38:12] 2026-05-30 02:38:12,184 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-30 04:38:12] 2026-05-30 02:38:12,185 | INFO     | traces error code: 0
[2026-05-30 04:38:12] 2026-05-30 02:38:12,185 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-30 04:38:12] 2026-05-30 02:38:12,678 | INFO     | PID=164335 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-05-30 04:38:12] 2026-05-30 02:38:12,678 | INFO     | .. there are 2 such processes running
[2026-05-30 04:38:12] 2026-05-30 02:38:12,679 | INFO     | found 0 job(s) in 20 queues
[2026-05-30 04:38:12] 2026-05-30 02:38:12,679 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-30 04:38:12] 2026-05-30 02:38:12,679 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-30 04:38:12] 2026-05-30 02:38:12,679 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-30 04:38:12] 2026-05-30 02:38:12,679 | INFO     | [monitor] control thread has ended
[2026-05-30 04:38:12] 2026-05-30 02:38:12,717 [wrapper] ==== pilot stdout END ====
[2026-05-30 04:38:12] 2026-05-30 02:38:12,718 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-30 04:38:12] 2026-05-30 02:38:12,720 [wrapper] pilotpid: 164335
[2026-05-30 04:38:12] 2026-05-30 02:38:12,721 [wrapper] Pilot exit status: 0
[2026-05-30 04:38:12] 2026-05-30 02:38:12,726 [wrapper] pandaids: 7159019547
[2026-05-30 04:38:12] 2026-05-30 02:38:12,742 [wrapper] cleanup supervisor_pilot  164341 164336
[2026-05-30 04:38:12] 2026-05-30 02:38:12,743 [wrapper] Test setup, not cleaning
[2026-05-30 04:38:12] 2026-05-30 02:38:12,745 [wrapper] apfmon messages muted
[2026-05-30 04:38:12] 2026-05-30 02:38:12,746 [wrapper] ==== wrapper stdout END ====
[2026-05-30 04:38:12] 2026-05-30 02:38:12,748 [wrapper] ==== wrapper stderr END ====
[2026-05-30 04:38:12]  *** Error codes and diagnostics ***
[2026-05-30 04:38:12]     "exeErrorCode": 65,
[2026-05-30 04:38:12]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: \"Py:ComponentAccumulator   ERROR This ComponentAccumulator was never merged!\"",
[2026-05-30 04:38:12]     "pilotErrorCode": 1305,
[2026-05-30 04:38:12]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: \"Py:ComponentAccumulator   ERROR This ComponentAccumulator was never merged!\"",
[2026-05-30 04:38:12]  *** Listing of results directory ***
[2026-05-30 04:38:12] total 276080
[2026-05-30 04:38:12] -rw-r--r-- 1 boinc boinc    683926 May 29 22:17 pilot3.tar.gz
[2026-05-30 04:38:12] -rwx------ 1 boinc boinc     36281 May 29 22:20 runpilot2-wrapper.sh
[2026-05-30 04:38:12] -rw-r--r-- 1 boinc boinc      5631 May 29 22:20 queuedata.json
[2026-05-30 04:38:12] -rw-r--r-- 1 boinc boinc       100 May 30 04:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-30 04:38:12] -rwxr-xr-x 1 boinc boinc      7986 May 30 04:34 run_atlas
[2026-05-30 04:38:12] -rw-r--r-- 1 boinc boinc       105 May 30 04:34 job.xml
[2026-05-30 04:38:12] -rw-r--r-- 2 boinc boinc 278344815 May 30 04:34 EVNT.49539717._000791.pool.root.1
[2026-05-30 04:38:12] -rw-r--r-- 2 boinc boinc    697432 May 30 04:34 input.tar.gz
[2026-05-30 04:38:12] drwxrwx--x 2 boinc boinc      4096 May 30 04:34 shared
[2026-05-30 04:38:12] -rw-r--r-- 1 boinc boinc         0 May 30 04:34 boinc_setup_complete
[2026-05-30 04:38:12] -rw-r--r-- 2 boinc boinc     15667 May 30 04:34 start_atlas.sh
[2026-05-30 04:38:12] -rw-r--r-- 1 boinc boinc      9098 May 30 04:34 init_data.xml
[2026-05-30 04:38:12] -rw-r--r-- 1 boinc boinc         0 May 30 04:34 boinc_lockfile
[2026-05-30 04:38:12] -rw-r--r-- 1 boinc boinc      2605 May 30 04:34 pandaJob.out
[2026-05-30 04:38:12] -rw------- 1 boinc boinc    995579 May 30 04:35 agis_schedconf.cvmfs.json
[2026-05-30 04:38:12] -rw------- 1 boinc boinc   1502789 May 30 04:35 agis_ddmendpoints.agis.ALL.json
[2026-05-30 04:38:12] -rw------- 1 boinc boinc       417 May 30 04:35 workernode_map.json
[2026-05-30 04:38:12] drwx------ 5 boinc boinc      4096 May 30 04:35 pilot3
[2026-05-30 04:38:12] -rw-r--r-- 1 boinc boinc       480 May 30 04:35 boinc_task_state.xml
[2026-05-30 04:38:12] -rw------- 1 boinc boinc       967 May 30 04:35 memory_monitor_summary.json
[2026-05-30 04:38:12] -rw------- 1 boinc boinc     37965 May 30 04:35 log.49545130._019886.job.log.tgz.1
[2026-05-30 04:38:12] -rw------- 1 boinc boinc      8428 May 30 04:37 heartbeat_new.json
[2026-05-30 04:38:12] -rw------- 1 boinc boinc      8390 May 30 04:37 heartbeat.json
[2026-05-30 04:38:12] -rw-r--r-- 1 boinc boinc      8192 May 30 04:38 boinc_mmap_file
[2026-05-30 04:38:12] -rw-r--r-- 1 boinc boinc        22 May 30 04:38 wrapper_checkpoint.txt
[2026-05-30 04:38:12] -rw------- 1 boinc boinc        95 May 30 04:38 pilot_heartbeat.json
[2026-05-30 04:38:12] -rw------- 1 boinc boinc       821 May 30 04:38 pilotlog.txt
[2026-05-30 04:38:12] -rw------- 1 boinc boinc     74926 May 30 04:38 log.49545130._019886.job.log.1
[2026-05-30 04:38:12] -rw------- 1 boinc boinc       188 May 30 04:38 output.list
[2026-05-30 04:38:12] -rw-r--r-- 1 boinc boinc       410 May 30 04:38 runtime_log
[2026-05-30 04:38:12] -rw------- 1 boinc boinc    133120 May 30 04:38 result.tar.gz
[2026-05-30 04:38:12] -rw-r--r-- 1 boinc boinc      8328 May 30 04:38 runtime_log.err
[2026-05-30 04:38:12] -rw------- 1 boinc boinc       622 May 30 04:38 f4fc4aa68c2c.diag
[2026-05-30 04:38:12] -rw-r--r-- 1 boinc boinc     23087 May 30 04:38 stderr.txt
[2026-05-30 04:38:12] No HITS result produced
[2026-05-30 04:38:12]  *** Contents of shared directory: ***
[2026-05-30 04:38:12] total 272660
[2026-05-30 04:38:12] -rw-r--r-- 2 boinc boinc 278344815 May 30 04:34 ATLAS.root_0
[2026-05-30 04:38:12] -rw-r--r-- 2 boinc boinc    697432 May 30 04:34 input.tar.gz
[2026-05-30 04:38:12] -rw-r--r-- 2 boinc boinc     15667 May 30 04:34 start_atlas.sh
[2026-05-30 04:38:12] -rw------- 1 boinc boinc    133120 May 30 04:38 result.tar.gz
04:38:14 (157860): run_atlas exited; CPU time 16.706791
04:38:14 (157860): called boinc_finish(0)

</stderr_txt>
]]>


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