Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
2026-05-30 04:52:46 (47832): vboxwrapper version 26210
2026-05-30 04:52:46 (47832): BOINC client version: 8.2.11
2026-05-30 04:52:47 (47832): Detected: VirtualBox VboxManage Interface (Version: 7.2.8)
2026-05-30 04:52:47 (47832): Successfully copied 'init_data.xml' to the shared directory.
2026-05-30 04:52:47 (47832): Create VM. (boinc_40b08381736677a8, slot#0)
2026-05-30 04:52:48 (47832): Setting Memory Size for VM. (4800MB)
2026-05-30 04:52:48 (47832): Setting CPU Count for VM. (8)
2026-05-30 04:52:48 (47832): Setting Chipset Options for VM.
2026-05-30 04:52:49 (47832): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-05-30 04:52:49 (47832): Setting Boot Options for VM.
2026-05-30 04:52:49 (47832): Setting Network Configuration for NAT. (Driver: virtio)
2026-05-30 04:52:50 (47832): Enabling VM Network Access.
2026-05-30 04:52:50 (47832): Disabling USB Support for VM.
2026-05-30 04:52:50 (47832): Disabling COM Port Support for VM.
2026-05-30 04:52:50 (47832): Disabling LPT Port Support for VM.
2026-05-30 04:52:51 (47832): Disabling Audio Support for VM.
2026-05-30 04:52:51 (47832): Disabling Clipboard Support for VM.
2026-05-30 04:52:51 (47832): Disabling Drag and Drop Support for VM.
2026-05-30 04:52:51 (47832): Adding storage controller(s) to VM.
2026-05-30 04:52:52 (47832): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-05-30 04:52:54 (47832): Adding VirtualBox Guest Additions to VM.
2026-05-30 04:52:54 (47832): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-05-30 04:52:54 (47832): forwarding host port 56707 to guest port 80
2026-05-30 04:52:55 (47832): Enabling remote desktop for VM.
2026-05-30 04:52:55 (47832): Required extension pack not installed, remote desktop not enabled.
2026-05-30 04:52:55 (47832): Enabling shared directory for VM.
2026-05-30 04:52:55 (47832): Starting VM using VBoxManage interface. (boinc_40b08381736677a8, slot#0)
2026-05-30 04:53:00 (47832): Successfully started VM. (PID = '8868')
2026-05-30 04:53:00 (47832): Reporting VM Process ID to BOINC.
2026-05-30 04:53:00 (47832): Guest Log: BIOS: VirtualBox 7.2.8
2026-05-30 04:53:00 (47832): Guest Log: CPUID EDX: 0x178bfbff
2026-05-30 04:53:00 (47832): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-05-30 04:53:00 (47832): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-05-30 04:53:00 (47832): VM state change detected. (old = 'poweredoff', new = 'running')
2026-05-30 04:53:00 (47832): Detected: Web Application Enabled (http://localhost:56707)
2026-05-30 04:53:00 (47832): Preference change detected
2026-05-30 04:53:00 (47832): Setting CPU throttle for VM. (25%)
2026-05-30 04:53:00 (47832): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-05-30 04:53:02 (47832): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-05-30 04:53:02 (47832): Guest Log: BIOS: Booting from Hard Disk...
2026-05-30 04:53:06 (47832): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-05-30 04:53:06 (47832): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-05-30 04:53:06 (47832): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-05-30 04:53:06 (47832): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-05-30 04:53:06 (47832): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-05-30 04:53:06 (47832): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-05-30 04:53:06 (47832): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-05-30 04:53:06 (47832): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-05-30 04:53:06 (47832): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-05-30 04:53:06 (47832): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-05-30 04:53:06 (47832): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-05-30 04:53:06 (47832): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-05-30 04:53:06 (47832): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-05-30 04:53:06 (47832): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-05-30 04:53:06 (47832): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-05-30 04:53:06 (47832): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-05-30 04:53:06 (47832): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-05-30 04:53:06 (47832): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-05-30 04:53:06 (47832): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-05-30 04:53:06 (47832): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-05-30 04:53:06 (47832): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-05-30 04:53:06 (47832): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-05-30 04:53:06 (47832): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-05-30 04:53:06 (47832): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-05-30 04:53:06 (47832): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-05-30 04:53:06 (47832): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-05-30 04:53:06 (47832): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-05-30 04:53:06 (47832): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-05-30 04:53:06 (47832): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-05-30 04:53:06 (47832): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-05-30 04:53:06 (47832): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-05-30 04:53:06 (47832): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-05-30 04:53:16 (47832): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-05-30 04:53:16 (47832): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-05-30 04:53:29 (47832): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-05-30 04:53:29 (47832): Guest Log: 00:00:00.000128 main     Log opened 2026-05-30T04:53:28.009951000Z
2026-05-30 04:53:29 (47832): Guest Log: 00:00:00.000208 main     OS Product: Linux
2026-05-30 04:53:29 (47832): Guest Log: 00:00:00.000231 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-05-30 04:53:29 (47832): Guest Log: 00:00:00.000248 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-05-30 04:53:29 (47832): Guest Log: 00:00:00.000263 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-05-30 04:53:29 (47832): Guest Log: 00:00:00.000264 main     Process ID: 1371
2026-05-30 04:53:29 (47832): Guest Log: 00:00:00.000264 main     Package type: LINUX_64BITS_GENERIC
2026-05-30 04:53:29 (47832): Guest Log: 00:00:00.000804 main     5.2.32 r132073 started. Verbose level = 0
2026-05-30 04:53:29 (47832): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-05-30 04:53:29 (47832): Guest Log: [INFO] Mounting shared directory
2026-05-30 04:53:30 (47832): Guest Log: [INFO] Checking for init_data.xml
2026-05-30 04:53:39 (47832): Guest Log: 00:00:10.006950 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 565 965 000ns (GuestNow=1 780 109 619 445 376 000 ns GuestLast=1 780 116 808 011 341 000 ns fSetTimeLastLoop=true )
2026-05-30 04:54:35 (47832): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-05-30 04:54:35 (47832): Guest Log: [INFO] Detected branch: prod
2026-05-30 04:54:35 (47832): Guest Log: This is the prod version of the ATLAS job wrapper
2026-05-30 04:54:35 (47832): Guest Log: Copying input files
2026-05-30 04:54:39 (47832): Guest Log: Copied input files into RunAtlas.
2026-05-30 04:54:39 (47832): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-05-30 04:54:39 (47832): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-05-30 04:54:39 (47832): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-05-30 04:54:39 (47832): Guest Log: Further information can be found at the LHC@home message board.
2026-05-30 04:54:53 (47832): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-05-30 04:54:53 (47832): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-05-30 04:54:53 (47832): Guest Log: 2.6.3.0 1673 0 32168 159952 4 1 3117654 4096001 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-05-30 04:54:55 (47832): Guest Log: copied the webapp to /var/www
2026-05-30 04:54:55 (47832): Guest Log: ATHENA_PROC_NUMBER=8
2026-05-30 04:54:55 (47832): Guest Log: ATHENA_CORE_NUMBER=8
2026-05-30 04:54:55 (47832): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-05-30 04:54:55 (47832): Guest Log:  *** Starting ATLAS job. (PandaID=7157815608 taskID=49545102) ***
2026-05-30 06:33:05 (47832): Status Report: Elapsed Time: '6000.000000'
2026-05-30 06:33:05 (47832): Status Report: CPU Time: '13117.187500'
2026-05-30 06:49:35 (47832): Guest Log:  *** Job finished ***
2026-05-30 06:49:35 (47832): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-05-30 06:49:35 (47832): Guest Log: 2026-05-30 04:49:23,690 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-05-30 06:49:35 (47832): Guest Log: 2026-05-30 04:49:23,690 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-05-30 06:49:35 (47832): Guest Log: 2026-05-30 04:49:27,317 | INFO     | [monitor] cgroup control has ended
2026-05-30 06:49:35 (47832): Guest Log: 2026-05-30 04:49:29,158 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140312668931904)>', '<ExcThread(monitor, started 140312152372992)>']
2026-05-30 06:49:35 (47832): Guest Log: 2026-05-30 04:49:29,704 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-05-30 06:49:35 (47832): Guest Log: 2026-05-30 04:49:29,705 | INFO     | [monitor] control thread has ended
2026-05-30 06:49:35 (47832): Guest Log: 2026-05-30 04:49:34,169 | INFO     | all workflow threads have been joined
2026-05-30 06:49:35 (47832): Guest Log: 2026-05-30 04:49:34,169 | INFO     | end of generic workflow (traces error code: 0)
2026-05-30 06:49:35 (47832): Guest Log: 2026-05-30 04:49:34,169 | INFO     | traces error code: 0
2026-05-30 06:49:35 (47832): Guest Log: 2026-05-30 04:49:34,169 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-05-30 06:49:35 (47832): Guest Log: 2026-05-30 04:49:34,303 [wrapper] ==== pilot stdout END ====
2026-05-30 06:49:35 (47832): Guest Log: 2026-05-30 04:49:34,306 [wrapper] ==== wrapper stdout RESUME ====
2026-05-30 06:49:35 (47832): Guest Log: 2026-05-30 04:49:34,309 [wrapper] pilotpid: 6100
2026-05-30 06:49:35 (47832): Guest Log: 2026-05-30 04:49:34,379 [wrapper] Pilot exit status: 0
2026-05-30 06:49:35 (47832): Guest Log: 2026-05-30 04:49:34,456 [wrapper] pandaids: 7157815608
2026-05-30 06:49:35 (47832): Guest Log: 2026-05-30 04:49:34,479 [wrapper] cleanup supervisor_pilot 26045 6101
2026-05-30 06:49:35 (47832): Guest Log: 2026-05-30 04:49:34,485 [wrapper] Test setup, not cleaning
2026-05-30 06:49:35 (47832): Guest Log: 2026-05-30 04:49:34,488 [wrapper] apfmon messages muted
2026-05-30 06:49:35 (47832): Guest Log: 2026-05-30 04:49:34,492 [wrapper] ==== wrapper stdout END ====
2026-05-30 06:49:35 (47832): Guest Log: 2026-05-30 04:49:34,495 [wrapper] ==== wrapper stderr END ====
2026-05-30 06:49:35 (47832): Guest Log:  *** Error codes and diagnostics ***
2026-05-30 06:49:35 (47832): Guest Log:     "exeErrorCode": 0,
2026-05-30 06:49:35 (47832): Guest Log:     "pilotErrorCode": 0,
2026-05-30 06:49:35 (47832): Guest Log:  *** Listing of results directory ***
2026-05-30 06:49:35 (47832): Guest Log: total 173772
2026-05-30 06:49:35 (47832): Guest Log: -rw-r--r--. 1 atlas atlas      5631 May 29 20:17 queuedata.json
2026-05-30 06:49:35 (47832): Guest Log: -rw-r--r--. 1 atlas atlas    683926 May 29 20:17 pilot3.tar.gz
2026-05-30 06:49:35 (47832): Guest Log: -rwx------. 1 atlas atlas     36281 May 29 20:17 runpilot2-wrapper.sh
2026-05-30 06:49:35 (47832): Guest Log: -rwxr-xr-x. 1 atlas atlas     11667 May 30 02:54 init_data.xml
2026-05-30 06:49:35 (47832): Guest Log: -rwxr-xr-x. 1 atlas atlas    697425 May 30 02:54 input.tar.gz
2026-05-30 06:49:35 (47832): Guest Log: -rwxr-xr-x. 1 atlas atlas     15667 May 30 02:54 start_atlas.sh
2026-05-30 06:49:35 (47832): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 30 02:54 EVNT.49539563._000840.pool.root.1 -> /data/./ATLAS.root_0
2026-05-30 06:49:35 (47832): Guest Log: -rw-r--r--. 1 atlas atlas      2568 May 30 02:54 pandaJob.out
2026-05-30 06:49:35 (47832): Guest Log: -rw-------. 1 atlas atlas    995579 May 30 02:55 agis_schedconf.cvmfs.json
2026-05-30 06:49:35 (47832): Guest Log: -rw-------. 1 atlas atlas   1502789 May 30 02:56 agis_ddmendpoints.agis.ALL.json
2026-05-30 06:49:35 (47832): Guest Log: -rw-------. 1 atlas atlas       428 May 30 02:56 workernode_map.json
2026-05-30 06:49:35 (47832): Guest Log: drwx------. 5 atlas atlas      4096 May 30 02:56 pilot3
2026-05-30 06:49:35 (47832): Guest Log: -rw-------. 1 atlas atlas 172041743 May 30 04:47 HITS.49545102._021494.pool.root.1
2026-05-30 06:49:35 (47832): Guest Log: -rw-------. 1 atlas atlas      1022 May 30 04:48 memory_monitor_summary.json
2026-05-30 06:49:35 (47832): Guest Log: -rw-------. 1 atlas atlas    333616 May 30 04:48 log.49545102._021494.job.log.tgz.1
2026-05-30 06:49:35 (47832): Guest Log: -rw-------. 1 atlas atlas      6372 May 30 04:48 heartbeat_new.json
2026-05-30 06:49:35 (47832): Guest Log: -rw-------. 1 atlas atlas      6263 May 30 04:48 heartbeat.json
2026-05-30 06:49:35 (47832): Guest Log: -rw-------. 1 atlas atlas        95 May 30 04:49 pilot_heartbeat.json
2026-05-30 06:49:35 (47832): Guest Log: -rw-------. 1 atlas atlas      4876 May 30 04:49 pilotlog.txt
2026-05-30 06:49:35 (47832): Guest Log: -rw-------. 1 atlas atlas    587836 May 30 04:49 log.49545102._021494.job.log.1
2026-05-30 06:49:35 (47832): Guest Log: -rw-------. 1 atlas atlas       357 May 30 04:49 output.list
2026-05-30 06:49:35 (47832): Guest Log: -rw-r--r--. 1 atlas atlas       410 May 30 04:49 runtime_log
2026-05-30 06:49:35 (47832): Guest Log: -rw-------. 1 atlas atlas    942080 May 30 04:49 result.tar.gz
2026-05-30 06:49:35 (47832): Guest Log: -rw-r--r--. 1 atlas atlas      8377 May 30 04:49 runtime_log.err
2026-05-30 06:49:35 (47832): Guest Log: -rw-------. 1 atlas atlas       656 May 30 04:49 f45fe9c17684.diag
2026-05-30 06:49:35 (47832): Guest Log: Looking for outputfile HITS.49545102._021494.pool.root.1
2026-05-30 06:49:35 (47832): Guest Log: HITS file was successfully produced
2026-05-30 06:49:35 (47832): Guest Log: -rw-------. 1 atlas atlas 172041743 May 30 04:47 /home/atlas/RunAtlas/HITS.49545102._021494.pool.root.1
2026-05-30 06:49:38 (47832): Guest Log: Successfully finished the ATLAS job!
2026-05-30 06:49:38 (47832): Guest Log: Copying the results back to the shared directory!
2026-05-30 06:49:38 (47832): Guest Log:  *** Contents of shared directory: ***
2026-05-30 06:49:38 (47832): Guest Log: total 427036
2026-05-30 06:49:38 (47832): Guest Log: -rwxrwxrwx. 1 root root 263566982 May 30 02:52 ATLAS.root_0
2026-05-30 06:49:38 (47832): Guest Log: -rwxrwxrwx. 1 root root 172041743 May 30 04:49 HITS.pool.root.1
2026-05-30 06:49:38 (47832): Guest Log: -rwxrwxrwx. 1 root root     11667 May 30 02:52 init_data.xml
2026-05-30 06:49:38 (47832): Guest Log: -rwxrwxrwx. 1 root root    697425 May 30 00:13 input.tar.gz
2026-05-30 06:49:38 (47832): Guest Log: -rwxrwxrwx. 1 root root    942080 May 30 04:49 result.tar.gz
2026-05-30 06:49:38 (47832): Guest Log: -rwxrwxrwx. 1 root root     15667 May 30 00:13 start_atlas.sh
2026-05-30 06:49:38 (47832): Guest Log:  *** Success! Shutting down the machine. ***
2026-05-30 06:49:38 (47832): VM Completion File Detected.
2026-05-30 06:49:38 (47832): Powering off VM.
2026-05-30 06:49:38 (47832): Successfully stopped VM.
2026-05-30 06:49:38 (47832): Deregistering VM. (boinc_40b08381736677a8, slot#0)
2026-05-30 06:49:38 (47832): Removing network bandwidth throttle group from VM.
2026-05-30 06:49:38 (47832): Removing VM from VirtualBox.
2026-05-30 06:49:44 (47832): called boinc_finish(0)

</stderr_txt>
]]>

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