Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:00:53 (27060): wrapper (7.7.26015): starting
08:00:53 (27060): wrapper: running run_atlas (--nthreads 8)
[2026-05-30 08:00:53] Arguments: --nthreads 8
[2026-05-30 08:00:53] Threads: 8
[2026-05-30 08:00:53] Checking for CVMFS
[2026-05-30 08:00:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-30 08:00:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-30 08:00:57] Running cvmfs_config stat atlas.cern.ch
[2026-05-30 08:00:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-30 08:00:58] 2.11.2.0 28827 64152 128524 159957 0 54 13782849 25165824 96 130560 0 26021119 99.874 19525218 6164 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-30 08:00:58] CVMFS is ok
[2026-05-30 08:00:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-30 08:00:58] Checking for apptainer binary...
[2026-05-30 08:00:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-30 08:00:58] Running /usr/bin/apptainer --version
[2026-05-30 08:00:59] apptainer version 1.3.2-1.el7
[2026-05-30 08:00:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-30 08:01:08] cg-vwn243.simple-grid.lan
[2026-05-30 08:01:08] apptainer works
[2026-05-30 08:01:08] Set ATHENA_PROC_NUMBER=8
[2026-05-30 08:01:08] Set ATHENA_CORE_NUMBER=8
[2026-05-30 08:01:08] Starting ATLAS job with PandaID=7157536044
[2026-05-30 08:01:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-30 12:56:28]  *** The last 200 lines of the pilot log: ***
[2026-05-30 12:56:28] 2026-05-30 10:55:19,616 | INFO     | this job has now completed (state=finished)
[2026-05-30 12:56:28] 2026-05-30 10:55:19,616 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-30 12:56:28] 2026-05-30 10:55:19,616 | INFO     | log transfer has been attempted: DONE
[2026-05-30 12:56:28] 2026-05-30 10:55:19,616 | INFO     | job 7157536044 has finished - writing final server update
[2026-05-30 12:56:28] 2026-05-30 10:55:19,617 | INFO     | total number of processed events: 400 (read)
[2026-05-30 12:56:28] 2026-05-30 10:55:19,619 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-7157536044/memory_monitor_summary.json (trf name=prmon)
[2026-05-30 12:56:28] 2026-05-30 10:55:19,620 | INFO     | extracted standard info from prmon json
[2026-05-30 12:56:28] 2026-05-30 10:55:19,620 | INFO     | extracted standard memory fields from prmon json
[2026-05-30 12:56:28] 2026-05-30 10:55:19,620 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-30 12:56:28] 2026-05-30 10:55:19,620 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-30 12:56:28] 2026-05-30 10:55:19,626 | INFO     | fitting pss+swap vs Time
[2026-05-30 12:56:28] 2026-05-30 10:55:19,627 | INFO     | sum of square deviations: 6590404498.0
[2026-05-30 12:56:28] 2026-05-30 10:55:19,633 | INFO     | sum of deviations: 105153116867.99995
[2026-05-30 12:56:28] 2026-05-30 10:55:19,634 | INFO     | mean x (centered): 0.0
[2026-05-30 12:56:28] 2026-05-30 10:55:19,634 | INFO     | mean y: 2501440.6859205775
[2026-05-30 12:56:28] 2026-05-30 10:55:19,634 | INFO     | intersect: 2501440.6859205775
[2026-05-30 12:56:28] 2026-05-30 10:55:19,635 | INFO     | chi2: 9.027654010443102
[2026-05-30 12:56:28] 2026-05-30 10:55:19,639 | INFO     | sum of square deviations: 6239923508.0
[2026-05-30 12:56:28] 2026-05-30 10:55:19,642 | INFO     | sum of deviations: 121741550045.50002
[2026-05-30 12:56:28] 2026-05-30 10:55:19,642 | INFO     | mean x (centered): 0.0
[2026-05-30 12:56:28] 2026-05-30 10:55:19,642 | INFO     | mean y: 2508539.4522058824
[2026-05-30 12:56:28] 2026-05-30 10:55:19,642 | INFO     | intersect: 2508539.4522058824
[2026-05-30 12:56:28] 2026-05-30 10:55:19,643 | INFO     | chi2: 8.337177917776263
[2026-05-30 12:56:28] 2026-05-30 10:55:19,643 | INFO     | current chi2=8.337177917776263 (change=7.648455422284724 %)
[2026-05-30 12:56:28] 2026-05-30 10:55:19,643 | INFO     | right removable region: 271
[2026-05-30 12:56:28] 2026-05-30 10:55:19,644 | INFO     | sum of square deviations: 6239923508.0
[2026-05-30 12:56:28] 2026-05-30 10:55:19,646 | INFO     | sum of deviations: 3985713739.5
[2026-05-30 12:56:28] 2026-05-30 10:55:19,646 | INFO     | mean x (centered): 0.0
[2026-05-30 12:56:28] 2026-05-30 10:55:19,646 | INFO     | mean y: 2545442.356617647
[2026-05-30 12:56:28] 2026-05-30 10:55:19,646 | INFO     | intersect: 2545442.356617647
[2026-05-30 12:56:28] 2026-05-30 10:55:19,647 | INFO     | chi2: 3.7791684908594867
[2026-05-30 12:56:28] 2026-05-30 10:55:19,647 | INFO     | current chi2=3.7791684908594867 (change=58.1378674184037 %)
[2026-05-30 12:56:28] 2026-05-30 10:55:19,647 | INFO     | sum of square deviations: 5902093918.0
[2026-05-30 12:56:28] 2026-05-30 10:55:19,650 | INFO     | sum of deviations: -68899304983.0
[2026-05-30 12:56:28] 2026-05-30 10:55:19,650 | INFO     | mean x (centered): 0.0
[2026-05-30 12:56:28] 2026-05-30 10:55:19,650 | INFO     | mean y: 2578286.4344569286
[2026-05-30 12:56:28] 2026-05-30 10:55:19,650 | INFO     | intersect: 2578286.4344569286
[2026-05-30 12:56:28] 2026-05-30 10:55:19,651 | INFO     | chi2: 1.1526999113257475
[2026-05-30 12:56:28] 2026-05-30 10:55:19,651 | INFO     | current chi2=1.1526999113257475 (change=69.49858377276024 %)
[2026-05-30 12:56:28] 2026-05-30 10:55:19,652 | INFO     | sum of square deviations: 5576683165.5
[2026-05-30 12:56:28] 2026-05-30 10:55:19,654 | INFO     | sum of deviations: -80656862924.5
[2026-05-30 12:56:28] 2026-05-30 10:55:19,654 | INFO     | mean x (centered): 0.0
[2026-05-30 12:56:28] 2026-05-30 10:55:19,654 | INFO     | mean y: 2583765.5610687025
[2026-05-30 12:56:28] 2026-05-30 10:55:19,654 | INFO     | intersect: 2583765.5610687025
[2026-05-30 12:56:28] 2026-05-30 10:55:19,655 | INFO     | chi2: 1.0282416621501398
[2026-05-30 12:56:28] 2026-05-30 10:55:19,655 | INFO     | current chi2=1.0282416621501398 (change=10.797107551822856 %)
[2026-05-30 12:56:28] 2026-05-30 10:55:19,655 | INFO     | left removable region: 15
[2026-05-30 12:56:28] 2026-05-30 10:55:19,656 | INFO     | sum of square deviations: 5202255680.0
[2026-05-30 12:56:28] 2026-05-30 10:55:19,658 | INFO     | sum of deviations: -61452584589.5
[2026-05-30 12:56:28] 2026-05-30 10:55:19,658 | INFO     | mean x (centered): 0.0
[2026-05-30 12:56:28] 2026-05-30 10:55:19,658 | INFO     | mean y: 2592984.91796875
[2026-05-30 12:56:28] 2026-05-30 10:55:19,659 | INFO     | intersect: 2592984.91796875
[2026-05-30 12:56:28] 2026-05-30 10:55:19,659 | INFO     | chi2: 0.24259763318265248
[2026-05-30 12:56:28] 2026-05-30 10:55:19,659 | INFO     | current memory leak: -11.81 B/s (using 256 data points, chi2=0.24)
[2026-05-30 12:56:28] 2026-05-30 10:55:19,660 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-05-30 12:56:28] 2026-05-30 10:55:19,660 | INFO     | ..............................
[2026-05-30 12:56:28] 2026-05-30 10:55:19,660 | INFO     | . Timing measurements:
[2026-05-30 12:56:28] 2026-05-30 10:55:19,660 | INFO     | . get job = 0 s
[2026-05-30 12:56:28] 2026-05-30 10:55:19,660 | INFO     | . initial setup = 117 s
[2026-05-30 12:56:28] 2026-05-30 10:55:19,661 | INFO     | . payload setup = 234 s
[2026-05-30 12:56:28] 2026-05-30 10:55:19,661 | INFO     | . stage-in = 0 s
[2026-05-30 12:56:28] 2026-05-30 10:55:19,661 | INFO     | . payload execution = 17005 s
[2026-05-30 12:56:28] 2026-05-30 10:55:19,661 | INFO     | . stage-out = 3 s
[2026-05-30 12:56:28] 2026-05-30 10:55:19,661 | INFO     | . log creation = 1 s
[2026-05-30 12:56:28] 2026-05-30 10:55:19,661 | INFO     | ..............................
[2026-05-30 12:56:28] 2026-05-30 10:55:19,808 | INFO     | 
[2026-05-30 12:56:28] 2026-05-30 10:55:19,809 | INFO     | job summary report
[2026-05-30 12:56:28] 2026-05-30 10:55:19,809 | INFO     | --------------------------------------------------
[2026-05-30 12:56:28] 2026-05-30 10:55:19,809 | INFO     | PanDA job id: 7157536044
[2026-05-30 12:56:28] 2026-05-30 10:55:19,809 | INFO     | task id: 50533940
[2026-05-30 12:56:28] 2026-05-30 10:55:19,809 | INFO     | errors: (none)
[2026-05-30 12:56:28] 2026-05-30 10:55:19,809 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-30 12:56:28] 2026-05-30 10:55:19,809 | INFO     | pilot state: finished 
[2026-05-30 12:56:28] 2026-05-30 10:55:19,809 | INFO     | transexitcode: 0
[2026-05-30 12:56:28] 2026-05-30 10:55:19,810 | INFO     | exeerrorcode: 0
[2026-05-30 12:56:28] 2026-05-30 10:55:19,810 | INFO     | exeerrordiag: 
[2026-05-30 12:56:28] 2026-05-30 10:55:19,810 | INFO     | exitcode: 0
[2026-05-30 12:56:28] 2026-05-30 10:55:19,810 | INFO     | exitmsg: OK
[2026-05-30 12:56:28] 2026-05-30 10:55:19,810 | INFO     | cpuconsumptiontime: 70483 s
[2026-05-30 12:56:28] 2026-05-30 10:55:19,810 | INFO     | nevents: 400
[2026-05-30 12:56:28] 2026-05-30 10:55:19,810 | INFO     | neventsw: 0
[2026-05-30 12:56:28] 2026-05-30 10:55:19,810 | INFO     | pid: 3166
[2026-05-30 12:56:28] 2026-05-30 10:55:19,810 | INFO     | pgrp: 3166
[2026-05-30 12:56:28] 2026-05-30 10:55:19,811 | INFO     | corecount: 8
[2026-05-30 12:56:28] 2026-05-30 10:55:19,811 | INFO     | event service: False
[2026-05-30 12:56:28] 2026-05-30 10:55:19,816 | INFO     | sizes: {0: 2265092, 1: 2265777, 2: 2267606, 3: 2267606, 17243: 2299635, 17248: 2308633, 17249: 2309011}
[2026-05-30 12:56:28] 2026-05-30 10:55:19,816 | INFO     | --------------------------------------------------
[2026-05-30 12:56:28] 2026-05-30 10:55:19,816 | INFO     | 
[2026-05-30 12:56:28] 2026-05-30 10:55:19,817 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-05-30 12:56:28] 2026-05-30 10:55:20,428 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-30 12:56:28] 2026-05-30 10:55:20,429 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-30 12:56:28] 2026-05-30 10:55:20,429 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-30 12:56:28] 2026-05-30 10:55:20,429 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-30 12:56:28] 2026-05-30 10:55:20,429 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-30 12:56:28] 2026-05-30 10:55:20,429 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-30 12:56:28] 2026-05-30 10:55:20,429 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-30 12:56:28] 2026-05-30 10:55:20,429 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-30 12:56:28] 2026-05-30 10:55:20,429 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-30 12:56:28] 2026-05-30 10:55:20,429 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-30 12:56:28] 2026-05-30 10:55:20,430 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-30 12:56:28] 2026-05-30 10:55:20,430 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-30 12:56:28] 2026-05-30 10:55:20,430 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-30 12:56:28] 2026-05-30 10:55:20,430 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-30 12:56:28] 2026-05-30 10:55:20,430 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-30 12:56:28] 2026-05-30 10:55:20,430 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-30 12:56:28] 2026-05-30 10:55:20,430 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-30 12:56:28] 2026-05-30 10:55:20,430 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-30 12:56:28] 2026-05-30 10:55:20,430 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-30 12:56:28] 2026-05-30 10:55:20,430 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-30 12:56:28] 2026-05-30 10:55:20,430 | INFO     | job 7157536044 has completed (purged errors)
[2026-05-30 12:56:28] 2026-05-30 10:55:20,431 | INFO     | overall cleanup function is called
[2026-05-30 12:56:28] 2026-05-30 10:55:21,439 | INFO     | --- collectZombieJob: --- 10, [3166]
[2026-05-30 12:56:28] 2026-05-30 10:55:21,439 | INFO     | zombie collector waiting for pid 3166
[2026-05-30 12:56:28] 2026-05-30 10:55:21,439 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-30 12:56:28] 2026-05-30 10:55:21,439 | INFO     | collected zombie processes
[2026-05-30 12:56:28] 2026-05-30 10:55:21,440 | INFO     | will attempt to kill all subprocesses of pid=3166
[2026-05-30 12:56:28] 2026-05-30 10:55:21,502 | INFO     | process IDs to be killed: [3166] (in reverse order)
[2026-05-30 12:56:28] 2026-05-30 10:55:22,210 | WARNING  | found no corresponding commands to process id(s)
[2026-05-30 12:56:28] 2026-05-30 10:55:22,211 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-30 12:56:28] 2026-05-30 10:55:22,212 | INFO     | did not find any defunct processes belonging to 3166
[2026-05-30 12:56:28] 2026-05-30 10:55:22,214 | INFO     | did not find any defunct processes belonging to 3166
[2026-05-30 12:56:28] 2026-05-30 10:55:22,214 | INFO     | Ready for new job
[2026-05-30 12:56:28] 2026-05-30 10:55:22,216 | INFO     | ***************************************
[2026-05-30 12:56:28] 2026-05-30 10:55:22,216 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-30 12:56:28] 2026-05-30 10:55:22,216 | INFO     | ***************************************
[2026-05-30 12:56:28] 2026-05-30 10:55:22,216 | INFO     | 
[2026-05-30 12:56:28] 2026-05-30 10:55:22,217 | INFO     | pilot is running in a VM
[2026-05-30 12:56:28] 2026-05-30 10:55:22,217 | INFO     | architecture information:
[2026-05-30 12:56:28] 2026-05-30 10:55:22,225 | INFO     | executing command: cat /etc/os-release
[2026-05-30 12:56:28] 2026-05-30 10:55:22,391 | INFO     | cat /etc/os-release:
[2026-05-30 12:56:28] NAME="CentOS Linux"
[2026-05-30 12:56:28] VERSION="7 (Core)"
[2026-05-30 12:56:28] ID="centos"
[2026-05-30 12:56:28] ID_LIKE="rhel fedora"
[2026-05-30 12:56:28] VERSION_ID="7"
[2026-05-30 12:56:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-30 12:56:28] ANSI_COLOR="0;31"
[2026-05-30 12:56:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-30 12:56:28] HOME_URL="https://www.centos.org/"
[2026-05-30 12:56:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-30 12:56:28] 
[2026-05-30 12:56:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-30 12:56:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-30 12:56:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-30 12:56:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-30 12:56:28] 
[2026-05-30 12:56:28] 2026-05-30 10:55:22,391 | INFO     | ***************************************
[2026-05-30 12:56:28] 2026-05-30 10:55:22,894 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-05-30 12:56:28] 2026-05-30 10:55:23,195 | INFO     | sufficient remaining disk space (497232642048 B)
[2026-05-30 12:56:28] 2026-05-30 10:55:23,195 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-30 12:56:28] 2026-05-30 10:55:23,195 | INFO     | current server update state: UPDATING_FINAL
[2026-05-30 12:56:28] 2026-05-30 10:55:23,195 | INFO     | update_server=False
[2026-05-30 12:56:28] 2026-05-30 10:55:23,195 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-30 12:56:28] 2026-05-30 10:55:23,196 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-30 12:56:28] 2026-05-30 10:55:23,196 | INFO     | aborting loop
[2026-05-30 12:56:28] 2026-05-30 10:55:23,508 | INFO     | all data control threads have been joined
[2026-05-30 12:56:28] 2026-05-30 10:55:23,532 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-30 12:56:28] 2026-05-30 10:55:23,909 | INFO     | all job control threads have been joined
[2026-05-30 12:56:28] 2026-05-30 10:55:23,980 | INFO     | all payload control threads have been joined
[2026-05-30 12:56:28] 2026-05-30 10:55:24,201 | INFO     | [job] retrieve thread has finished
[2026-05-30 12:56:28] 2026-05-30 10:55:24,202 | INFO     | [job] job monitor thread has finished
[2026-05-30 12:56:28] 2026-05-30 10:55:24,327 | INFO     | [job] create_data_payload thread has finished
[2026-05-30 12:56:28] 2026-05-30 10:55:24,347 | INFO     | [data] copytool_in thread has finished
[2026-05-30 12:56:28] 2026-05-30 10:55:24,514 | INFO     | [data] control thread has finished
[2026-05-30 12:56:28] 2026-05-30 10:55:24,574 | INFO     | [job] validate thread has finished
[2026-05-30 12:56:28] 2026-05-30 10:55:24,764 | INFO     | [payload] execute_payloads thread has finished
[2026-05-30 12:56:28] 2026-05-30 10:55:24,804 | INFO     | [payload] validate_pre thread has finished
[2026-05-30 12:56:28] 2026-05-30 10:55:24,826 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-30 12:56:28] 2026-05-30 10:55:24,915 | INFO     | [job] control thread has finished
[2026-05-30 12:56:28] 2026-05-30 10:55:24,986 | INFO     | [payload] control thread has finished
[2026-05-30 12:56:28] 2026-05-30 10:55:25,052 | INFO     | [payload] failed_post thread has finished
[2026-05-30 12:56:28] 2026-05-30 10:55:25,308 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-30 12:56:28] 2026-05-30 10:55:25,539 | INFO     | [data] copytool_out thread has finished
[2026-05-30 12:56:28] 2026-05-30 10:55:25,568 | INFO     | [payload] validate_post thread has finished
[2026-05-30 12:56:28] 2026-05-30 10:55:25,630 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-30 12:56:28] 2026-05-30 10:55:25,832 | INFO     | [job] queue monitor thread has finished
[2026-05-30 12:56:28] 2026-05-30 10:55:29,639 | INFO     | [data] queue_monitor thread has finished
[2026-05-30 12:56:28] 2026-05-30 10:55:52,452 | INFO     | PID=31088 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-30 12:56:28] 2026-05-30 10:55:52,452 | INFO     | .. there are 2 such processes running
[2026-05-30 12:56:28] 2026-05-30 10:55:52,458 | INFO     | found 0 job(s) in 20 queues
[2026-05-30 12:56:28] 2026-05-30 10:55:52,458 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-30 12:56:28] 2026-05-30 10:55:52,458 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-30 12:56:28] 2026-05-30 10:56:16,517 | INFO     | [monitor] cgroup control has ended
[2026-05-30 12:56:28] 2026-05-30 10:56:17,896 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140350119397184)>', '<ExcThread(monitor, started 140349389399808)>']
[2026-05-30 12:56:28] 2026-05-30 10:56:18,614 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-30 12:56:28] 2026-05-30 10:56:18,614 | INFO     | [monitor] control thread has ended
[2026-05-30 12:56:28] 2026-05-30 10:56:22,922 | INFO     | all workflow threads have been joined
[2026-05-30 12:56:28] 2026-05-30 10:56:22,922 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-30 12:56:28] 2026-05-30 10:56:22,922 | INFO     | traces error code: 0
[2026-05-30 12:56:28] 2026-05-30 10:56:22,923 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-30 12:56:28] 2026-05-30 10:56:23,350 [wrapper] ==== pilot stdout END ====
[2026-05-30 12:56:28] 2026-05-30 10:56:23,447 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-30 12:56:28] 2026-05-30 10:56:23,520 [wrapper] pilotpid: 31088
[2026-05-30 12:56:28] 2026-05-30 10:56:23,616 [wrapper] Pilot exit status: 0
[2026-05-30 12:56:28] 2026-05-30 10:56:24,071 [wrapper] pandaids: 7157536044
[2026-05-30 12:56:28] 2026-05-30 10:56:25,129 [wrapper] cleanup supervisor_pilot 21724 31089
[2026-05-30 12:56:28] 2026-05-30 10:56:25,240 [wrapper] Test setup, not cleaning
[2026-05-30 12:56:28] 2026-05-30 10:56:25,293 [wrapper] apfmon messages muted
[2026-05-30 12:56:28] 2026-05-30 10:56:25,373 [wrapper] ==== wrapper stdout END ====
[2026-05-30 12:56:28] 2026-05-30 10:56:25,495 [wrapper] ==== wrapper stderr END ====
[2026-05-30 12:56:28]  *** Error codes and diagnostics ***
[2026-05-30 12:56:28]     "exeErrorCode": 0,
[2026-05-30 12:56:28]     "pilotErrorCode": 0,
[2026-05-30 12:56:28]  *** Listing of results directory ***
[2026-05-30 12:56:28] total 555332
[2026-05-30 12:56:28] -rw-r--r--. 1 boinc boinc      5631 May 29 17:58 queuedata.json
[2026-05-30 12:56:28] -rw-r--r--. 1 boinc boinc    683926 May 29 17:58 pilot3.tar.gz
[2026-05-30 12:56:28] -rwx------. 1 boinc boinc     36281 May 29 17:58 runpilot2-wrapper.sh
[2026-05-30 12:56:28] -rw-r--r--. 1 boinc boinc       100 May 30 08:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-30 12:56:28] -rwxr-xr-x. 1 boinc boinc      7986 May 30 08:00 run_atlas
[2026-05-30 12:56:28] -rw-r--r--. 1 boinc boinc       105 May 30 08:00 job.xml
[2026-05-30 12:56:28] -rw-r--r--. 2 boinc boinc 310107671 May 30 08:00 EVNT.50532940._000061.pool.root.1
[2026-05-30 12:56:28] -rw-r--r--. 1 boinc boinc      6306 May 30 08:00 init_data.xml
[2026-05-30 12:56:28] -rw-r--r--. 2 boinc boinc     15667 May 30 08:00 start_atlas.sh
[2026-05-30 12:56:28] drwxrwx--x. 2 boinc boinc        68 May 30 08:00 shared
[2026-05-30 12:56:28] -rw-r--r--. 2 boinc boinc    697405 May 30 08:00 input.tar.gz
[2026-05-30 12:56:28] -rw-r--r--. 1 boinc boinc         0 May 30 08:00 boinc_lockfile
[2026-05-30 12:56:28] -rw-r--r--. 1 boinc boinc      2509 May 30 08:01 pandaJob.out
[2026-05-30 12:56:28] -rw-------. 1 boinc boinc       415 May 30 08:07 workernode_map.json
[2026-05-30 12:56:28] -rw-------. 1 boinc boinc    995230 May 30 08:07 agis_schedconf.cvmfs.json
[2026-05-30 12:56:28] drwx------. 5 boinc boinc      4096 May 30 08:07 pilot3
[2026-05-30 12:56:28] -rw-------. 1 boinc boinc 250442948 May 30 12:53 HITS.50533940._000253.pool.root.1
[2026-05-30 12:56:28] -rw-r--r--. 1 boinc boinc       489 May 30 12:54 boinc_task_state.xml
[2026-05-30 12:56:28] -rw-------. 1 boinc boinc      1021 May 30 12:55 memory_monitor_summary.json
[2026-05-30 12:56:28] -rw-------. 1 boinc boinc   1502789 May 30 12:55 agis_ddmendpoints.agis.ALL.json
[2026-05-30 12:56:28] -rw-------. 1 boinc boinc    410025 May 30 12:55 log.50533940._000253.job.log.tgz.1
[2026-05-30 12:56:28] -rw-------. 1 boinc boinc      6342 May 30 12:55 heartbeat_new.json
[2026-05-30 12:56:28] -rw-------. 1 boinc boinc      6233 May 30 12:55 heartbeat.json
[2026-05-30 12:56:28] -rw-------. 1 boinc boinc        95 May 30 12:55 pilot_heartbeat.json
[2026-05-30 12:56:28] -rw-r--r--. 1 boinc boinc      8192 May 30 12:56 boinc_mmap_file
[2026-05-30 12:56:28] -rw-r--r--. 1 boinc boinc        28 May 30 12:56 wrapper_checkpoint.txt
[2026-05-30 12:56:28] -rw-------. 1 boinc boinc      4883 May 30 12:56 pilotlog.txt
[2026-05-30 12:56:28] -rw-------. 1 boinc boinc   1593089 May 30 12:56 log.50533940._000253.job.log.1
[2026-05-30 12:56:28] -rw-------. 1 boinc boinc       357 May 30 12:56 output.list
[2026-05-30 12:56:28] -rw-r--r--. 1 boinc boinc       410 May 30 12:56 runtime_log
[2026-05-30 12:56:28] -rw-------. 1 boinc boinc   2017280 May 30 12:56 result.tar.gz
[2026-05-30 12:56:28] -rw-r--r--. 1 boinc boinc      8439 May 30 12:56 runtime_log.err
[2026-05-30 12:56:28] -rw-------. 1 boinc boinc       656 May 30 12:56 b7c12f179791.diag
[2026-05-30 12:56:28] -rw-r--r--. 1 boinc boinc     20609 May 30 12:56 stderr.txt
[2026-05-30 12:56:28] HITS file was successfully produced:
[2026-05-30 12:56:28] -rw-------. 1 boinc boinc 250442948 May 30 12:53 shared/HITS.pool.root.1
[2026-05-30 12:56:28]  *** Contents of shared directory: ***
[2026-05-30 12:56:28] total 550088
[2026-05-30 12:56:28] -rw-r--r--. 2 boinc boinc 310107671 May 30 08:00 ATLAS.root_0
[2026-05-30 12:56:28] -rw-r--r--. 2 boinc boinc     15667 May 30 08:00 start_atlas.sh
[2026-05-30 12:56:28] -rw-r--r--. 2 boinc boinc    697405 May 30 08:00 input.tar.gz
[2026-05-30 12:56:28] -rw-------. 1 boinc boinc 250442948 May 30 12:53 HITS.pool.root.1
[2026-05-30 12:56:28] -rw-------. 1 boinc boinc   2017280 May 30 12:56 result.tar.gz
12:56:29 (27060): run_atlas exited; CPU time 70641.690075
12:56:29 (27060): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN