Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:30:08 (25324): wrapper (7.7.26015): starting
09:30:08 (25324): wrapper: running run_atlas (--nthreads 8)
[2026-05-29 09:30:08] Arguments: --nthreads 8
[2026-05-29 09:30:08] Threads: 8
[2026-05-29 09:30:08] Checking for CVMFS
[2026-05-29 09:30:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-29 09:30:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-29 09:30:08] Running cvmfs_config stat atlas.cern.ch
[2026-05-29 09:30:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-29 09:30:08] 2.11.2.0 7040 382705 159036 159933 0 50 17919389 18432001 1831 130560 0 228954777 99.982 13721589 27517 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-05-29 09:30:08] CVMFS is ok
[2026-05-29 09:30:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-29 09:30:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-29 09:30:08] Further information can be found at the LHC@home message board.
[2026-05-29 09:30:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-29 09:30:08] Checking for apptainer binary...
[2026-05-29 09:30:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-29 09:30:08] Running /usr/bin/apptainer --version
[2026-05-29 09:30:08] apptainer version 1.3.2-1.el7
[2026-05-29 09:30:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-29 09:30:09] c-206-7.aglt2.org
[2026-05-29 09:30:09] apptainer works
[2026-05-29 09:30:09] Set ATHENA_PROC_NUMBER=8
[2026-05-29 09:30:09] Set ATHENA_CORE_NUMBER=8
[2026-05-29 09:30:09] Starting ATLAS job with PandaID=7157456904
[2026-05-29 09:30:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-29 12:06:49]  *** The last 200 lines of the pilot log: ***
[2026-05-29 12:06:49] 2026-05-29 16:06:18,069 | INFO     | reading metadata from: /tmp/boinchome/slots/2/PanDA_Pilot-7157456904/jobReport.json
[2026-05-29 12:06:49] 2026-05-29 16:06:18,071 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/2/workernode_map.json
[2026-05-29 12:06:49] 2026-05-29 16:06:18,071 | INFO     | this job has now completed (state=finished)
[2026-05-29 12:06:49] 2026-05-29 16:06:18,071 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-29 12:06:49] 2026-05-29 16:06:18,072 | INFO     | log transfer has been attempted: DONE
[2026-05-29 12:06:49] 2026-05-29 16:06:18,072 | INFO     | job 7157456904 has finished - writing final server update
[2026-05-29 12:06:49] 2026-05-29 16:06:18,072 | INFO     | total number of processed events: 400 (read)
[2026-05-29 12:06:49] 2026-05-29 16:06:18,075 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7157456904/memory_monitor_summary.json (trf name=prmon)
[2026-05-29 12:06:49] 2026-05-29 16:06:18,075 | INFO     | extracted standard info from prmon json
[2026-05-29 12:06:49] 2026-05-29 16:06:18,075 | INFO     | extracted standard memory fields from prmon json
[2026-05-29 12:06:49] 2026-05-29 16:06:18,076 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-29 12:06:49] 2026-05-29 16:06:18,076 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-29 12:06:49] 2026-05-29 16:06:18,078 | INFO     | fitting pss+swap vs Time
[2026-05-29 12:06:49] 2026-05-29 16:06:18,078 | INFO     | sum of square deviations: 1110539892.0
[2026-05-29 12:06:49] 2026-05-29 16:06:18,079 | INFO     | sum of deviations: -5818124794.999998
[2026-05-29 12:06:49] 2026-05-29 16:06:18,079 | INFO     | mean x (centered): 0.0
[2026-05-29 12:06:49] 2026-05-29 16:06:18,079 | INFO     | mean y: 2545436.385620915
[2026-05-29 12:06:49] 2026-05-29 16:06:18,079 | INFO     | intersect: 2545436.385620915
[2026-05-29 12:06:49] 2026-05-29 16:06:18,080 | INFO     | chi2: 1.6026745388088683
[2026-05-29 12:06:49] 2026-05-29 16:06:18,080 | INFO     | sum of square deviations: 1005179777.0
[2026-05-29 12:06:49] 2026-05-29 16:06:18,081 | INFO     | sum of deviations: -5278042476.499994
[2026-05-29 12:06:49] 2026-05-29 16:06:18,081 | INFO     | mean x (centered): 0.0
[2026-05-29 12:06:49] 2026-05-29 16:06:18,081 | INFO     | mean y: 2546218.385135135
[2026-05-29 12:06:49] 2026-05-29 16:06:18,081 | INFO     | intersect: 2546218.385135135
[2026-05-29 12:06:49] 2026-05-29 16:06:18,081 | INFO     | chi2: 1.6026333074564032
[2026-05-29 12:06:49] 2026-05-29 16:06:18,081 | INFO     | current chi2=1.6026333074564032 (change=0.0025726591061830213 %)
[2026-05-29 12:06:49] 2026-05-29 16:06:18,081 | INFO     | right removable region: 147
[2026-05-29 12:06:49] 2026-05-29 16:06:18,082 | INFO     | sum of square deviations: 1005179777.0
[2026-05-29 12:06:49] 2026-05-29 16:06:18,082 | INFO     | sum of deviations: -28809661452.000004
[2026-05-29 12:06:49] 2026-05-29 16:06:18,082 | INFO     | mean x (centered): 0.0
[2026-05-29 12:06:49] 2026-05-29 16:06:18,083 | INFO     | mean y: 2578223.0135135134
[2026-05-29 12:06:49] 2026-05-29 16:06:18,083 | INFO     | intersect: 2578223.0135135134
[2026-05-29 12:06:49] 2026-05-29 16:06:18,083 | INFO     | chi2: 0.1623745322919964
[2026-05-29 12:06:49] 2026-05-29 16:06:18,083 | INFO     | current chi2=0.1623745322919964 (change=89.86852736721733 %)
[2026-05-29 12:06:49] 2026-05-29 16:06:18,083 | INFO     | sum of square deviations: 906703512.0
[2026-05-29 12:06:49] 2026-05-29 16:06:18,084 | INFO     | sum of deviations: -28571854477.0
[2026-05-29 12:06:49] 2026-05-29 16:06:18,084 | INFO     | mean x (centered): 0.0
[2026-05-29 12:06:49] 2026-05-29 16:06:18,084 | INFO     | mean y: 2577766.4125874126
[2026-05-29 12:06:49] 2026-05-29 16:06:18,084 | INFO     | intersect: 2577766.4125874126
[2026-05-29 12:06:49] 2026-05-29 16:06:18,084 | INFO     | chi2: 0.13697072520491654
[2026-05-29 12:06:49] 2026-05-29 16:06:18,085 | INFO     | current chi2=0.13697072520491654 (change=15.645191846586167 %)
[2026-05-29 12:06:49] 2026-05-29 16:06:18,085 | INFO     | left removable region: 10
[2026-05-29 12:06:49] 2026-05-29 16:06:18,085 | INFO     | sum of square deviations: 797291228.0
[2026-05-29 12:06:49] 2026-05-29 16:06:18,086 | INFO     | sum of deviations: -27120570719.999996
[2026-05-29 12:06:49] 2026-05-29 16:06:18,086 | INFO     | mean x (centered): 0.0
[2026-05-29 12:06:49] 2026-05-29 16:06:18,086 | INFO     | mean y: 2580195.204379562
[2026-05-29 12:06:49] 2026-05-29 16:06:18,086 | INFO     | intersect: 2580195.204379562
[2026-05-29 12:06:49] 2026-05-29 16:06:18,086 | INFO     | chi2: 0.13089176559216797
[2026-05-29 12:06:49] 2026-05-29 16:06:18,086 | INFO     | current memory leak: -34.02 B/s (using 137 data points, chi2=0.13)
[2026-05-29 12:06:49] 2026-05-29 16:06:18,087 | INFO     | could have reported an average CPU frequency of 2433 MHz (9 samples)
[2026-05-29 12:06:49] 2026-05-29 16:06:18,087 | INFO     | ..............................
[2026-05-29 12:06:49] 2026-05-29 16:06:18,087 | INFO     | . Timing measurements:
[2026-05-29 12:06:49] 2026-05-29 16:06:18,087 | INFO     | . get job = 0 s
[2026-05-29 12:06:49] 2026-05-29 16:06:18,087 | INFO     | . initial setup = 5 s
[2026-05-29 12:06:49] 2026-05-29 16:06:18,088 | INFO     | . payload setup = 7 s
[2026-05-29 12:06:49] 2026-05-29 16:06:18,088 | INFO     | . stage-in = 0 s
[2026-05-29 12:06:49] 2026-05-29 16:06:18,088 | INFO     | . payload execution = 9335 s
[2026-05-29 12:06:49] 2026-05-29 16:06:18,088 | INFO     | . stage-out = 0 s
[2026-05-29 12:06:49] 2026-05-29 16:06:18,088 | INFO     | . log creation = 0 s
[2026-05-29 12:06:49] 2026-05-29 16:06:18,088 | INFO     | ..............................
[2026-05-29 12:06:49] 2026-05-29 16:06:18,159 | INFO     | 
[2026-05-29 12:06:49] 2026-05-29 16:06:18,159 | INFO     | job summary report
[2026-05-29 12:06:49] 2026-05-29 16:06:18,159 | INFO     | --------------------------------------------------
[2026-05-29 12:06:49] 2026-05-29 16:06:18,160 | INFO     | PanDA job id: 7157456904
[2026-05-29 12:06:49] 2026-05-29 16:06:18,160 | INFO     | task id: 49545102
[2026-05-29 12:06:49] 2026-05-29 16:06:18,160 | INFO     | errors: (none)
[2026-05-29 12:06:49] 2026-05-29 16:06:18,160 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-29 12:06:49] 2026-05-29 16:06:18,160 | INFO     | pilot state: finished 
[2026-05-29 12:06:49] 2026-05-29 16:06:18,160 | INFO     | transexitcode: 0
[2026-05-29 12:06:49] 2026-05-29 16:06:18,161 | INFO     | exeerrorcode: 0
[2026-05-29 12:06:49] 2026-05-29 16:06:18,161 | INFO     | exeerrordiag: 
[2026-05-29 12:06:49] 2026-05-29 16:06:18,161 | INFO     | exitcode: 0
[2026-05-29 12:06:49] 2026-05-29 16:06:18,161 | INFO     | exitmsg: OK
[2026-05-29 12:06:49] 2026-05-29 16:06:18,161 | INFO     | cpuconsumptiontime: 70499 s
[2026-05-29 12:06:49] 2026-05-29 16:06:18,161 | INFO     | nevents: 400
[2026-05-29 12:06:49] 2026-05-29 16:06:18,162 | INFO     | neventsw: 0
[2026-05-29 12:06:49] 2026-05-29 16:06:18,162 | INFO     | pid: 1267
[2026-05-29 12:06:49] 2026-05-29 16:06:18,162 | INFO     | pgrp: 1267
[2026-05-29 12:06:49] 2026-05-29 16:06:18,162 | INFO     | corecount: 8
[2026-05-29 12:06:49] 2026-05-29 16:06:18,162 | INFO     | event service: False
[2026-05-29 12:06:49] 2026-05-29 16:06:18,162 | INFO     | sizes: {0: 2265839, 1: 2267668, 9347: 2295960, 9348: 2305013, 9351: 2305271}
[2026-05-29 12:06:49] 2026-05-29 16:06:18,163 | INFO     | --------------------------------------------------
[2026-05-29 12:06:49] 2026-05-29 16:06:18,163 | INFO     | 
[2026-05-29 12:06:49] 2026-05-29 16:06:18,163 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-05-29 12:06:49] 2026-05-29 16:06:18,178 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-29 12:06:49] 2026-05-29 16:06:18,178 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-29 12:06:49] 2026-05-29 16:06:18,178 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-29 12:06:49] 2026-05-29 16:06:18,178 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-29 12:06:49] 2026-05-29 16:06:18,178 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-29 12:06:49] 2026-05-29 16:06:18,179 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-29 12:06:49] 2026-05-29 16:06:18,179 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-29 12:06:49] 2026-05-29 16:06:18,179 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-29 12:06:49] 2026-05-29 16:06:18,179 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-29 12:06:49] 2026-05-29 16:06:18,179 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-29 12:06:49] 2026-05-29 16:06:18,179 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-29 12:06:49] 2026-05-29 16:06:18,180 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-29 12:06:49] 2026-05-29 16:06:18,180 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-29 12:06:49] 2026-05-29 16:06:18,180 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-29 12:06:49] 2026-05-29 16:06:18,180 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-29 12:06:49] 2026-05-29 16:06:18,180 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-29 12:06:49] 2026-05-29 16:06:18,180 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-29 12:06:49] 2026-05-29 16:06:18,181 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-29 12:06:49] 2026-05-29 16:06:18,181 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-29 12:06:49] 2026-05-29 16:06:18,181 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-29 12:06:49] 2026-05-29 16:06:18,181 | INFO     | job 7157456904 has completed (purged errors)
[2026-05-29 12:06:49] 2026-05-29 16:06:18,181 | INFO     | overall cleanup function is called
[2026-05-29 12:06:49] 2026-05-29 16:06:19,189 | INFO     | --- collectZombieJob: --- 10, [1267]
[2026-05-29 12:06:49] 2026-05-29 16:06:19,190 | INFO     | zombie collector waiting for pid 1267
[2026-05-29 12:06:49] 2026-05-29 16:06:19,190 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-29 12:06:49] 2026-05-29 16:06:19,190 | INFO     | collected zombie processes
[2026-05-29 12:06:49] 2026-05-29 16:06:19,190 | INFO     | will attempt to kill all subprocesses of pid=1267
[2026-05-29 12:06:49] 2026-05-29 16:06:19,298 | INFO     | process IDs to be killed: [1267] (in reverse order)
[2026-05-29 12:06:49] 2026-05-29 16:06:19,339 | WARNING  | found no corresponding commands to process id(s)
[2026-05-29 12:06:49] 2026-05-29 16:06:19,339 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-29 12:06:49] 2026-05-29 16:06:19,342 | INFO     | did not find any defunct processes belonging to 1267
[2026-05-29 12:06:49] 2026-05-29 16:06:19,344 | INFO     | did not find any defunct processes belonging to 1267
[2026-05-29 12:06:49] 2026-05-29 16:06:19,344 | INFO     | Ready for new job
[2026-05-29 12:06:49] 2026-05-29 16:06:19,346 | INFO     | ***************************************
[2026-05-29 12:06:49] 2026-05-29 16:06:19,346 | INFO     | ***  PanDA Pilot version 3.13.1.30  ***
[2026-05-29 12:06:49] 2026-05-29 16:06:19,346 | INFO     | ***************************************
[2026-05-29 12:06:49] 2026-05-29 16:06:19,347 | INFO     | 
[2026-05-29 12:06:49] 2026-05-29 16:06:19,347 | INFO     | architecture information:
[2026-05-29 12:06:49] 2026-05-29 16:06:19,348 | INFO     | executing command: cat /etc/os-release
[2026-05-29 12:06:49] 2026-05-29 16:06:19,358 | INFO     | cat /etc/os-release:
[2026-05-29 12:06:49] NAME="CentOS Linux"
[2026-05-29 12:06:49] VERSION="7 (Core)"
[2026-05-29 12:06:49] ID="centos"
[2026-05-29 12:06:49] ID_LIKE="rhel fedora"
[2026-05-29 12:06:49] VERSION_ID="7"
[2026-05-29 12:06:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-29 12:06:49] ANSI_COLOR="0;31"
[2026-05-29 12:06:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-29 12:06:49] HOME_URL="https://www.centos.org/"
[2026-05-29 12:06:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-29 12:06:49] 
[2026-05-29 12:06:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-29 12:06:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-29 12:06:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-29 12:06:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-29 12:06:49] 
[2026-05-29 12:06:49] 2026-05-29 16:06:19,358 | INFO     | ***************************************
[2026-05-29 12:06:49] 2026-05-29 16:06:19,861 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-05-29 12:06:49] 2026-05-29 16:06:19,871 | INFO     | sufficient remaining disk space (27839692800 B)
[2026-05-29 12:06:49] 2026-05-29 16:06:19,872 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-29 12:06:49] 2026-05-29 16:06:19,872 | INFO     | current server update state: UPDATING_FINAL
[2026-05-29 12:06:49] 2026-05-29 16:06:19,872 | INFO     | update_server=False
[2026-05-29 12:06:49] 2026-05-29 16:06:19,872 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-29 12:06:49] 2026-05-29 16:06:19,872 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-29 12:06:49] 2026-05-29 16:06:19,873 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-29 12:06:49] 2026-05-29 16:06:20,049 | WARNING  | process 1267 can no longer be monitored (due to stat problems) - aborting
[2026-05-29 12:06:49] 2026-05-29 16:06:20,142 | INFO     | using path: /tmp/boinchome/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-05-29 12:06:49] 2026-05-29 16:06:20,244 | INFO     | number of running child processes to parent process 1267: 1
[2026-05-29 12:06:49] 2026-05-29 16:06:20,244 | INFO     | maximum number of monitored processes: 6
[2026-05-29 12:06:49] 2026-05-29 16:06:20,245 | INFO     | aborting job monitoring since job object (job id=7157456904) has expired
[2026-05-29 12:06:49] 2026-05-29 16:06:20,245 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-29 12:06:49] 2026-05-29 16:06:20,245 | INFO     | will abort loop
[2026-05-29 12:06:49] 2026-05-29 16:06:20,364 | INFO     | all job control threads have been joined
[2026-05-29 12:06:49] 2026-05-29 16:06:20,622 | INFO     | all data control threads have been joined
[2026-05-29 12:06:49] 2026-05-29 16:06:20,757 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-29 12:06:49] 2026-05-29 16:06:20,878 | INFO     | [job] retrieve thread has finished
[2026-05-29 12:06:49] 2026-05-29 16:06:20,878 | INFO     | [job] queue monitor thread has finished
[2026-05-29 12:06:49] 2026-05-29 16:06:20,883 | INFO     | [payload] validate_pre thread has finished
[2026-05-29 12:06:49] 2026-05-29 16:06:20,885 | INFO     | [job] validate thread has finished
[2026-05-29 12:06:49] 2026-05-29 16:06:21,121 | INFO     | [data] copytool_in thread has finished
[2026-05-29 12:06:49] 2026-05-29 16:06:21,121 | INFO     | [job] create_data_payload thread has finished
[2026-05-29 12:06:49] 2026-05-29 16:06:21,248 | INFO     | [job] job monitor thread has finished
[2026-05-29 12:06:49] 2026-05-29 16:06:21,294 | INFO     | [payload] execute_payloads thread has finished
[2026-05-29 12:06:49] 2026-05-29 16:06:21,307 | INFO     | all payload control threads have been joined
[2026-05-29 12:06:49] 2026-05-29 16:06:21,369 | INFO     | [job] control thread has finished
[2026-05-29 12:06:49] 2026-05-29 16:06:21,628 | INFO     | [data] control thread has finished
[2026-05-29 12:06:49] 2026-05-29 16:06:21,872 | INFO     | [payload] validate_post thread has finished
[2026-05-29 12:06:49] 2026-05-29 16:06:22,131 | INFO     | [payload] failed_post thread has finished
[2026-05-29 12:06:49] 2026-05-29 16:06:22,312 | INFO     | [payload] control thread has finished
[2026-05-29 12:06:49] 2026-05-29 16:06:22,763 | INFO     | [data] copytool_out thread has finished
[2026-05-29 12:06:49] 2026-05-29 16:06:23,879 | INFO     | [data] queue_monitor thread has finished
[2026-05-29 12:06:49] 2026-05-29 16:06:30,294 | INFO     | job.realtimelogging is not enabled
[2026-05-29 12:06:49] 2026-05-29 16:06:31,300 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-29 12:06:49] 2026-05-29 16:06:40,725 | INFO     | [monitor] cgroup control has ended
[2026-05-29 12:06:49] 2026-05-29 16:06:41,198 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140719574951744)>', '<ExcThread(monitor, started 140719117276928)>']
[2026-05-29 12:06:49] 2026-05-29 16:06:46,224 | INFO     | all workflow threads have been joined
[2026-05-29 12:06:49] 2026-05-29 16:06:46,224 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-29 12:06:49] 2026-05-29 16:06:46,224 | INFO     | traces error code: 0
[2026-05-29 12:06:49] 2026-05-29 16:06:46,224 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-29 12:06:49] 2026-05-29 16:06:49,646 | INFO     | PID=29287 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-29 12:06:49] 2026-05-29 16:06:49,646 | INFO     | .. there are 3 such processes running
[2026-05-29 12:06:49] 2026-05-29 16:06:49,647 | INFO     | found 0 job(s) in 20 queues
[2026-05-29 12:06:49] 2026-05-29 16:06:49,647 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-29 12:06:49] 2026-05-29 16:06:49,647 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-29 12:06:49] 2026-05-29 16:06:49,647 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-29 12:06:49] 2026-05-29 16:06:49,648 | INFO     | [monitor] control thread has ended
[2026-05-29 12:06:49] 2026-05-29 16:06:49,734 [wrapper] ==== pilot stdout END ====
[2026-05-29 12:06:49] 2026-05-29 16:06:49,736 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-29 12:06:49] 2026-05-29 16:06:49,738 [wrapper] pilotpid: 29287
[2026-05-29 12:06:49] 2026-05-29 16:06:49,740 [wrapper] Pilot exit status: 0
[2026-05-29 12:06:49] 2026-05-29 16:06:49,750 [wrapper] pandaids: 7157456904
[2026-05-29 12:06:49] 2026-05-29 16:06:49,786 [wrapper] cleanup supervisor_pilot 22288 29288
[2026-05-29 12:06:49] 2026-05-29 16:06:49,788 [wrapper] Test setup, not cleaning
[2026-05-29 12:06:49] 2026-05-29 16:06:49,790 [wrapper] apfmon messages muted
[2026-05-29 12:06:49] 2026-05-29 16:06:49,793 [wrapper] ==== wrapper stdout END ====
[2026-05-29 12:06:49] 2026-05-29 16:06:49,795 [wrapper] ==== wrapper stderr END ====
[2026-05-29 12:06:49]  *** Error codes and diagnostics ***
[2026-05-29 12:06:49]     "exeErrorCode": 0,
[2026-05-29 12:06:49]     "pilotErrorCode": 0,
[2026-05-29 12:06:49]  *** Listing of results directory ***
[2026-05-29 12:06:49] total 425736
[2026-05-29 12:06:49] -rw-r--r-- 1 boincer umatlas      5631 May 29 01:10 queuedata.json
[2026-05-29 12:06:49] -rw-r--r-- 1 boincer umatlas    709501 May 29 01:10 pilot3.tar.gz
[2026-05-29 12:06:49] -rwx------ 1 boincer umatlas     36281 May 29 01:12 runpilot2-wrapper.sh
[2026-05-29 12:06:49] -rw-r--r-- 1 boincer umatlas       100 May 29 09:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-29 12:06:49] -rwxr-xr-x 1 boincer umatlas      7986 May 29 09:30 run_atlas
[2026-05-29 12:06:49] -rw-r--r-- 1 boincer umatlas       105 May 29 09:30 job.xml
[2026-05-29 12:06:49] -rw-r--r-- 2 boincer umatlas 261609608 May 29 09:30 EVNT.49539563._000842.pool.root.1
[2026-05-29 12:06:49] -rw-r--r-- 2 boincer umatlas     15667 May 29 09:30 start_atlas.sh
[2026-05-29 12:06:49] drwxrwx--x 2 boincer umatlas      4096 May 29 09:30 shared
[2026-05-29 12:06:49] -rw-r--r-- 2 boincer umatlas    722751 May 29 09:30 input.tar.gz
[2026-05-29 12:06:49] -rw-r--r-- 1 boincer umatlas         0 May 29 09:30 boinc_lockfile
[2026-05-29 12:06:49] -rw-r--r-- 1 boincer umatlas      2569 May 29 09:30 pandaJob.out
[2026-05-29 12:06:49] -rw------- 1 boincer umatlas        57 May 29 09:30 setup.sh.local
[2026-05-29 12:06:49] -rw------- 1 boincer umatlas    996230 May 29 09:30 agis_schedconf.cvmfs.json
[2026-05-29 12:06:49] -rw------- 1 boincer umatlas         0 May 29 09:30 agis_ddmendpoints.agis.ALL.json
[2026-05-29 12:06:49] -rw------- 1 boincer umatlas   1251485 May 29 09:30 cric_ddmendpoints.json
[2026-05-29 12:06:49] -rw------- 1 boincer umatlas       444 May 29 09:30 workernode_map.json
[2026-05-29 12:06:49] drwx------ 5 boincer umatlas      4096 May 29 09:30 pilot3
[2026-05-29 12:06:49] -rw-r--r-- 1 boincer umatlas      5865 May 29 12:02 init_data.xml
[2026-05-29 12:06:49] -rw------- 1 boincer umatlas 167950886 May 29 12:05 HITS.49545102._020213.pool.root.1
[2026-05-29 12:06:49] -rw-r--r-- 1 boincer umatlas       488 May 29 12:05 boinc_task_state.xml
[2026-05-29 12:06:49] -rw------- 1 boincer umatlas      1048 May 29 12:06 memory_monitor_summary.json
[2026-05-29 12:06:49] -rw------- 1 boincer umatlas    348915 May 29 12:06 log.49545102._020213.job.log.tgz.1
[2026-05-29 12:06:49] -rw------- 1 boincer umatlas      6484 May 29 12:06 heartbeat_new.json
[2026-05-29 12:06:49] -rw------- 1 boincer umatlas      6375 May 29 12:06 heartbeat.json
[2026-05-29 12:06:49] -rw-r--r-- 1 boincer umatlas      8192 May 29 12:06 boinc_mmap_file
[2026-05-29 12:06:49] -rw-r--r-- 1 boincer umatlas        27 May 29 12:06 wrapper_checkpoint.txt
[2026-05-29 12:06:49] -rw------- 1 boincer umatlas        95 May 29 12:06 pilot_heartbeat.json
[2026-05-29 12:06:49] -rw------- 1 boincer umatlas       820 May 29 12:06 pilotlog.txt
[2026-05-29 12:06:49] -rw------- 1 boincer umatlas    881970 May 29 12:06 log.49545102._020213.job.log.1
[2026-05-29 12:06:49] -rw------- 1 boincer umatlas       357 May 29 12:06 output.list
[2026-05-29 12:06:49] -rw-r--r-- 1 boincer umatlas       410 May 29 12:06 runtime_log
[2026-05-29 12:06:49] -rw------- 1 boincer umatlas   1249280 May 29 12:06 result.tar.gz
[2026-05-29 12:06:49] -rw-r--r-- 1 boincer umatlas      8959 May 29 12:06 runtime_log.err
[2026-05-29 12:06:49] -rw------- 1 boincer umatlas       657 May 29 12:06 203526e513d5.diag
[2026-05-29 12:06:49] -rw-r--r-- 1 boincer umatlas     21156 May 29 12:06 stderr.txt
[2026-05-29 12:06:49] HITS file was successfully produced:
[2026-05-29 12:06:49] -rw------- 1 boincer umatlas 167950886 May 29 12:05 shared/HITS.pool.root.1
[2026-05-29 12:06:49]  *** Contents of shared directory: ***
[2026-05-29 12:06:49] total 421448
[2026-05-29 12:06:49] -rw-r--r-- 2 boincer umatlas 261609608 May 29 09:30 ATLAS.root_0
[2026-05-29 12:06:49] -rw-r--r-- 2 boincer umatlas     15667 May 29 09:30 start_atlas.sh
[2026-05-29 12:06:49] -rw-r--r-- 2 boincer umatlas    722751 May 29 09:30 input.tar.gz
[2026-05-29 12:06:49] -rw------- 1 boincer umatlas 167950886 May 29 12:05 HITS.pool.root.1
[2026-05-29 12:06:49] -rw------- 1 boincer umatlas   1249280 May 29 12:06 result.tar.gz
12:06:51 (25324): run_atlas exited; CPU time 70596.508841
12:06:51 (25324): called boinc_finish(0)

</stderr_txt>
]]>

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