Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:23:17 (323438): wrapper (7.7.26015): starting
22:23:17 (323438): wrapper: running run_atlas (--nthreads 12)
[2026-05-29 22:23:17] Arguments: --nthreads 12
[2026-05-29 22:23:17] Threads: 12
[2026-05-29 22:23:17] Checking for CVMFS
[2026-05-29 22:23:17] No cvmfs_config command found, will try listing directly
[2026-05-29 22:23:17] CVMFS is ok
[2026-05-29 22:23:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-29 22:23:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-29 22:23:17] Further information can be found at the LHC@home message board.
[2026-05-29 22:23:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-29 22:23:17] Checking for apptainer binary...
[2026-05-29 22:23:17] which: no apptainer in ((null))
[2026-05-29 22:23:17] apptainer is not installed, using version from CVMFS
[2026-05-29 22:23:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-29 22:23:17] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot120/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut22.grid.cesnet.cz
[2026-05-29 22:23:17] apptainer works
[2026-05-29 22:23:17] Set ATHENA_PROC_NUMBER=12
[2026-05-29 22:23:17] Set ATHENA_CORE_NUMBER=12
[2026-05-29 22:23:17] Starting ATLAS job with PandaID=7157467370
[2026-05-29 22:23:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot120/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-29 22:47:47]  *** The last 200 lines of the pilot log: ***
[2026-05-29 22:47:47]  guid=10120717-6df4-4293-8c27-023425115ad8
[2026-05-29 22:47:47]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-05-29 22:47:47]  is_altstaged=None
[2026-05-29 22:47:47]  is_tar=False
[2026-05-29 22:47:47]  lfn=log.50533925._011285.job.log.tgz.1
[2026-05-29 22:47:47]  mtime=0
[2026-05-29 22:47:47]  protocol_id=None
[2026-05-29 22:47:47]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-05-29 22:47:47]  replicas=None
[2026-05-29 22:47:47]  scope=mc23_13p6TeV
[2026-05-29 22:47:47]  status=None
[2026-05-29 22:47:47]  status_code=0
[2026-05-29 22:47:47]  storage_token=
[2026-05-29 22:47:47]  surl=/var/lib/boinc/var/slot120/slots/0/PanDA_Pilot-7157467370/log.50533925._011285.job.log.tgz.1
[2026-05-29 22:47:47]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ee/20/log.50533925._011285.job.log.tgz.1
[2026-05-29 22:47:47]  workdir=None
[2026-05-29 22:47:47] ]
[2026-05-29 22:47:47] 2026-05-29 20:47:10,280 | INFO     | transferring file log.50533925._011285.job.log.tgz.1 from /var/lib/boinc/var/slot120/slots/0/PanDA_Pilot-7157467370/log.50533925._011285.job.log.tgz.1 to /var/lib/
[2026-05-29 22:47:47] 2026-05-29 20:47:10,280 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot120/slots/0/PanDA_Pilot-7157467370/log.50533925._011285.job.log.tgz.1 /var/lib/boinc/var/slot120/slots/0/
[2026-05-29 22:47:47] 2026-05-29 20:47:10,293 | INFO     | adding to output.list: log.50533925._011285.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ee/20/log.50533925._011285.job.log.tg
[2026-05-29 22:47:47] 2026-05-29 20:47:10,294 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-05-29 22:47:47] 2026-05-29 20:47:10,294 | INFO     | summary of transferred files:
[2026-05-29 22:47:47] 2026-05-29 20:47:10,294 | INFO     |  -- lfn=log.50533925._011285.job.log.tgz.1, status_code=0, status=transferred
[2026-05-29 22:47:47] 2026-05-29 20:47:10,294 | INFO     | stage-out finished correctly
[2026-05-29 22:47:47] 2026-05-29 20:47:10,319 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-29 22:47:47] 2026-05-29 20:47:13,014 | INFO     | job 7157467370 has state=finished
[2026-05-29 22:47:47] 2026-05-29 20:47:13,014 | INFO     | preparing for final server update for job 7157467370 in state='finished'
[2026-05-29 22:47:47] 2026-05-29 20:47:13,014 | INFO     | reading metadata from: /var/lib/boinc/var/slot120/slots/0/PanDA_Pilot-7157467370/jobReport.json
[2026-05-29 22:47:47] 2026-05-29 20:47:13,016 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot120/slots/0/workernode_map.json
[2026-05-29 22:47:47] 2026-05-29 20:47:13,016 | INFO     | this job has now completed (state=finished)
[2026-05-29 22:47:47] 2026-05-29 20:47:13,016 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-29 22:47:47] 2026-05-29 20:47:13,016 | INFO     | log transfer has been attempted: DONE
[2026-05-29 22:47:47] 2026-05-29 20:47:13,016 | INFO     | job 7157467370 has finished - writing final server update
[2026-05-29 22:47:47] 2026-05-29 20:47:13,016 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2704880/.job.ad'
[2026-05-29 22:47:47] 2026-05-29 20:47:13,016 | INFO     | total number of processed events: 400 (read)
[2026-05-29 22:47:47] 2026-05-29 20:47:13,031 | INFO     | using path: /var/lib/boinc/var/slot120/slots/0/PanDA_Pilot-7157467370/memory_monitor_summary.json (trf name=prmon)
[2026-05-29 22:47:47] 2026-05-29 20:47:13,032 | INFO     | extracted standard info from prmon json
[2026-05-29 22:47:47] 2026-05-29 20:47:13,032 | INFO     | extracted standard memory fields from prmon json
[2026-05-29 22:47:47] 2026-05-29 20:47:13,032 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-29 22:47:47] 2026-05-29 20:47:13,032 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-29 22:47:47] 2026-05-29 20:47:13,032 | INFO     | fitting pss+swap vs Time
[2026-05-29 22:47:47] 2026-05-29 20:47:13,032 | INFO     | sum of square deviations: 1518168.0
[2026-05-29 22:47:47] 2026-05-29 20:47:13,032 | INFO     | sum of deviations: -591667975.0
[2026-05-29 22:47:47] 2026-05-29 20:47:13,032 | INFO     | mean x (centered): 0.0
[2026-05-29 22:47:47] 2026-05-29 20:47:13,032 | INFO     | mean y: 3068577.0588235296
[2026-05-29 22:47:47] 2026-05-29 20:47:13,033 | INFO     | intersect: 3068577.0588235296
[2026-05-29 22:47:47] 2026-05-29 20:47:13,033 | INFO     | chi2: 0.009208489285055419
[2026-05-29 22:47:47] 2026-05-29 20:47:13,033 | INFO     | current memory leak: -389.72 B/s (using 17 data points, chi2=0.01)
[2026-05-29 22:47:47] 2026-05-29 20:47:13,033 | INFO     | could have reported an average CPU frequency of 3588 MHz (4 samples)
[2026-05-29 22:47:47] 2026-05-29 20:47:13,033 | INFO     | ..............................
[2026-05-29 22:47:47] 2026-05-29 20:47:13,033 | INFO     | . Timing measurements:
[2026-05-29 22:47:47] 2026-05-29 20:47:13,033 | INFO     | . get job = 0 s
[2026-05-29 22:47:47] 2026-05-29 20:47:13,033 | INFO     | . initial setup = 2 s
[2026-05-29 22:47:47] 2026-05-29 20:47:13,033 | INFO     | . payload setup = 4 s
[2026-05-29 22:47:47] 2026-05-29 20:47:13,033 | INFO     | . stage-in = 0 s
[2026-05-29 22:47:47] 2026-05-29 20:47:13,033 | INFO     | . payload execution = 1406 s
[2026-05-29 22:47:47] 2026-05-29 20:47:13,033 | INFO     | . stage-out = 0 s
[2026-05-29 22:47:47] 2026-05-29 20:47:13,033 | INFO     | . log creation = 0 s
[2026-05-29 22:47:47] 2026-05-29 20:47:13,033 | INFO     | ..............................
[2026-05-29 22:47:47] 2026-05-29 20:47:13,072 | INFO     | 
[2026-05-29 22:47:47] 2026-05-29 20:47:13,073 | INFO     | job summary report
[2026-05-29 22:47:47] 2026-05-29 20:47:13,073 | INFO     | --------------------------------------------------
[2026-05-29 22:47:47] 2026-05-29 20:47:13,073 | INFO     | PanDA job id: 7157467370
[2026-05-29 22:47:47] 2026-05-29 20:47:13,073 | INFO     | task id: 50533925
[2026-05-29 22:47:47] 2026-05-29 20:47:13,073 | INFO     | errors: (none)
[2026-05-29 22:47:47] 2026-05-29 20:47:13,073 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-29 22:47:47] 2026-05-29 20:47:13,073 | INFO     | pilot state: finished 
[2026-05-29 22:47:47] 2026-05-29 20:47:13,073 | INFO     | transexitcode: 0
[2026-05-29 22:47:47] 2026-05-29 20:47:13,073 | INFO     | exeerrorcode: 0
[2026-05-29 22:47:47] 2026-05-29 20:47:13,073 | INFO     | exeerrordiag: 
[2026-05-29 22:47:47] 2026-05-29 20:47:13,073 | INFO     | exitcode: 0
[2026-05-29 22:47:47] 2026-05-29 20:47:13,073 | INFO     | exitmsg: OK
[2026-05-29 22:47:47] 2026-05-29 20:47:13,073 | INFO     | cpuconsumptiontime: 14781 s
[2026-05-29 22:47:47] 2026-05-29 20:47:13,073 | INFO     | nevents: 400
[2026-05-29 22:47:47] 2026-05-29 20:47:13,073 | INFO     | neventsw: 0
[2026-05-29 22:47:47] 2026-05-29 20:47:13,073 | INFO     | pid: 334478
[2026-05-29 22:47:47] 2026-05-29 20:47:13,073 | INFO     | pgrp: 334478
[2026-05-29 22:47:47] 2026-05-29 20:47:13,073 | INFO     | corecount: 12
[2026-05-29 22:47:47] 2026-05-29 20:47:13,073 | INFO     | event service: False
[2026-05-29 22:47:47] 2026-05-29 20:47:13,073 | INFO     | sizes: {0: 2267523, 10: 2267523, 1414: 2292262, 1415: 2301340, 1418: 2301478}
[2026-05-29 22:47:47] 2026-05-29 20:47:13,073 | INFO     | --------------------------------------------------
[2026-05-29 22:47:47] 2026-05-29 20:47:13,073 | INFO     | 
[2026-05-29 22:47:47] 2026-05-29 20:47:13,073 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot120/slots/0
[2026-05-29 22:47:47] 2026-05-29 20:47:13,087 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-29 22:47:47] 2026-05-29 20:47:13,087 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-29 22:47:47] 2026-05-29 20:47:13,087 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-29 22:47:47] 2026-05-29 20:47:13,087 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-29 22:47:47] 2026-05-29 20:47:13,087 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-29 22:47:47] 2026-05-29 20:47:13,087 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-29 22:47:47] 2026-05-29 20:47:13,087 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-29 22:47:47] 2026-05-29 20:47:13,088 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-29 22:47:47] 2026-05-29 20:47:13,088 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-29 22:47:47] 2026-05-29 20:47:13,088 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-29 22:47:47] 2026-05-29 20:47:13,088 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-29 22:47:47] 2026-05-29 20:47:13,088 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-29 22:47:47] 2026-05-29 20:47:13,088 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-29 22:47:47] 2026-05-29 20:47:13,088 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-29 22:47:47] 2026-05-29 20:47:13,088 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-29 22:47:47] 2026-05-29 20:47:13,088 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-29 22:47:47] 2026-05-29 20:47:13,088 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-29 22:47:47] 2026-05-29 20:47:13,088 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-29 22:47:47] 2026-05-29 20:47:13,088 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-29 22:47:47] 2026-05-29 20:47:13,088 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-29 22:47:47] 2026-05-29 20:47:13,088 | INFO     | job 7157467370 has completed (purged errors)
[2026-05-29 22:47:47] 2026-05-29 20:47:13,088 | INFO     | overall cleanup function is called
[2026-05-29 22:47:47] 2026-05-29 20:47:14,094 | INFO     | --- collectZombieJob: --- 10, [334478]
[2026-05-29 22:47:47] 2026-05-29 20:47:14,094 | INFO     | zombie collector waiting for pid 334478
[2026-05-29 22:47:47] 2026-05-29 20:47:14,095 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-29 22:47:47] 2026-05-29 20:47:14,095 | INFO     | collected zombie processes
[2026-05-29 22:47:47] 2026-05-29 20:47:14,095 | INFO     | will attempt to kill all subprocesses of pid=334478
[2026-05-29 22:47:47] 2026-05-29 20:47:14,496 | INFO     | PID=328479 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-05-29 22:47:47] 2026-05-29 20:47:14,496 | INFO     | .. there are 4 such processes running
[2026-05-29 22:47:47] 2026-05-29 20:47:14,819 | WARNING  | process 334478 can no longer be monitored (due to stat problems) - aborting
[2026-05-29 22:47:47] 2026-05-29 20:47:14,896 | INFO     | process IDs to be killed: [334478] (in reverse order)
[2026-05-29 22:47:47] 2026-05-29 20:47:14,998 | WARNING  | found no corresponding commands to process id(s)
[2026-05-29 22:47:47] 2026-05-29 20:47:14,998 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-29 22:47:47] 2026-05-29 20:47:15,047 | INFO     | did not find any defunct processes belonging to 334478
[2026-05-29 22:47:47] 2026-05-29 20:47:15,055 | INFO     | using path: /var/lib/boinc/var/slot120/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-05-29 22:47:47] 2026-05-29 20:47:15,082 | INFO     | did not find any defunct processes belonging to 334478
[2026-05-29 22:47:47] 2026-05-29 20:47:15,082 | INFO     | Ready for new job
[2026-05-29 22:47:47] 2026-05-29 20:47:15,083 | INFO     | ***************************************
[2026-05-29 22:47:47] 2026-05-29 20:47:15,083 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-29 22:47:47] 2026-05-29 20:47:15,083 | INFO     | ***************************************
[2026-05-29 22:47:47] 2026-05-29 20:47:15,083 | INFO     | 
[2026-05-29 22:47:47] 2026-05-29 20:47:15,089 | INFO     | architecture information:
[2026-05-29 22:47:47] 2026-05-29 20:47:15,090 | INFO     | executing command: cat /etc/os-release
[2026-05-29 22:47:47] 2026-05-29 20:47:15,101 | INFO     | cat /etc/os-release:
[2026-05-29 22:47:47] NAME="CentOS Linux"
[2026-05-29 22:47:47] VERSION="7 (Core)"
[2026-05-29 22:47:47] ID="centos"
[2026-05-29 22:47:47] ID_LIKE="rhel fedora"
[2026-05-29 22:47:47] VERSION_ID="7"
[2026-05-29 22:47:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-29 22:47:47] ANSI_COLOR="0;31"
[2026-05-29 22:47:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-29 22:47:47] HOME_URL="https://www.centos.org/"
[2026-05-29 22:47:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-29 22:47:47] 
[2026-05-29 22:47:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-29 22:47:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-29 22:47:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-29 22:47:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-29 22:47:47] 
[2026-05-29 22:47:47] 2026-05-29 20:47:15,102 | INFO     | ***************************************
[2026-05-29 22:47:47] 2026-05-29 20:47:15,252 | INFO     | number of running child processes to parent process 334478: 1
[2026-05-29 22:47:47] 2026-05-29 20:47:15,252 | INFO     | maximum number of monitored processes: 6
[2026-05-29 22:47:47] 2026-05-29 20:47:15,252 | INFO     | aborting job monitoring since job object (job id=7157467370) has expired
[2026-05-29 22:47:47] 2026-05-29 20:47:15,605 | INFO     | executing command: df -mP /var/lib/boinc/var/slot120/slots/0
[2026-05-29 22:47:47] 2026-05-29 20:47:15,614 | INFO     | sufficient remaining disk space (330800562176 B)
[2026-05-29 22:47:47] 2026-05-29 20:47:15,615 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-29 22:47:47] 2026-05-29 20:47:15,615 | INFO     | current server update state: UPDATING_FINAL
[2026-05-29 22:47:47] 2026-05-29 20:47:15,615 | INFO     | update_server=False
[2026-05-29 22:47:47] 2026-05-29 20:47:15,615 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-29 22:47:47] 2026-05-29 20:47:15,615 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-29 22:47:47] 2026-05-29 20:47:15,615 | INFO     | will abort loop
[2026-05-29 22:47:47] 2026-05-29 20:47:15,789 | INFO     | all data control threads have been joined
[2026-05-29 22:47:47] 2026-05-29 20:47:15,828 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-29 22:47:47] 2026-05-29 20:47:16,371 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-29 22:47:47] 2026-05-29 20:47:16,405 | INFO     | all payload control threads have been joined
[2026-05-29 22:47:47] 2026-05-29 20:47:16,592 | INFO     | all job control threads have been joined
[2026-05-29 22:47:47] 2026-05-29 20:47:16,620 | INFO     | [job] retrieve thread has finished
[2026-05-29 22:47:47] 2026-05-29 20:47:16,621 | INFO     | [job] job monitor thread has finished
[2026-05-29 22:47:47] 2026-05-29 20:47:16,642 | INFO     | [payload] validate_pre thread has finished
[2026-05-29 22:47:47] 2026-05-29 20:47:16,728 | INFO     | [data] copytool_in thread has finished
[2026-05-29 22:47:47] 2026-05-29 20:47:16,794 | INFO     | [data] control thread has finished
[2026-05-29 22:47:47] 2026-05-29 20:47:17,041 | INFO     | [payload] failed_post thread has finished
[2026-05-29 22:47:47] 2026-05-29 20:47:17,410 | INFO     | [payload] control thread has finished
[2026-05-29 22:47:47] 2026-05-29 20:47:17,598 | INFO     | [job] control thread has finished
[2026-05-29 22:47:47] 2026-05-29 20:47:17,647 | INFO     | [payload] execute_payloads thread has finished
[2026-05-29 22:47:47] 2026-05-29 20:47:17,671 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-29 22:47:47] 2026-05-29 20:47:17,829 | INFO     | [data] copytool_out thread has finished
[2026-05-29 22:47:47] 2026-05-29 20:47:17,962 | INFO     | [job] validate thread has finished
[2026-05-29 22:47:47] 2026-05-29 20:47:18,080 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-29 22:47:47] 2026-05-29 20:47:18,084 | INFO     | [job] create_data_payload thread has finished
[2026-05-29 22:47:47] 2026-05-29 20:47:18,178 | INFO     | [payload] validate_post thread has finished
[2026-05-29 22:47:47] 2026-05-29 20:47:19,085 | INFO     | [job] queue monitor thread has finished
[2026-05-29 22:47:47] 2026-05-29 20:47:20,377 | INFO     | [data] queue_monitor thread has finished
[2026-05-29 22:47:47] 2026-05-29 20:47:26,278 | INFO     | [monitor] cgroup control has ended
[2026-05-29 22:47:47] 2026-05-29 20:47:27,787 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22410037684032)>', '<ExcThread(monitor, started 22409804793600)>']
[2026-05-29 22:47:47] 2026-05-29 20:47:32,812 | INFO     | all workflow threads have been joined
[2026-05-29 22:47:47] 2026-05-29 20:47:32,812 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-29 22:47:47] 2026-05-29 20:47:32,812 | INFO     | traces error code: 0
[2026-05-29 22:47:47] 2026-05-29 20:47:32,812 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-29 22:47:47] 2026-05-29 20:47:46,849 | INFO     | PID=328479 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-05-29 22:47:47] 2026-05-29 20:47:46,849 | INFO     | .. there are 4 such processes running
[2026-05-29 22:47:47] 2026-05-29 20:47:46,850 | INFO     | found 0 job(s) in 20 queues
[2026-05-29 22:47:47] 2026-05-29 20:47:46,850 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-29 22:47:47] 2026-05-29 20:47:46,850 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-29 22:47:47] 2026-05-29 20:47:46,851 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-29 22:47:47] 2026-05-29 20:47:46,851 | INFO     | [monitor] control thread has ended
[2026-05-29 22:47:47] 2026-05-29 20:47:46,924 [wrapper] ==== pilot stdout END ====
[2026-05-29 22:47:47] 2026-05-29 20:47:46,926 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-29 22:47:47] 2026-05-29 20:47:46,928 [wrapper] pilotpid: 328479
[2026-05-29 22:47:47] 2026-05-29 20:47:46,930 [wrapper] Pilot exit status: 0
[2026-05-29 22:47:47] 2026-05-29 20:47:46,937 [wrapper] pandaids: 7157467370
[2026-05-29 22:47:47] 2026-05-29 20:47:47,007 [wrapper] cleanup supervisor_pilot  371504 328480
[2026-05-29 22:47:47] 2026-05-29 20:47:47,008 [wrapper] Test setup, not cleaning
[2026-05-29 22:47:47] 2026-05-29 20:47:47,010 [wrapper] apfmon messages muted
[2026-05-29 22:47:47] 2026-05-29 20:47:47,012 [wrapper] ==== wrapper stdout END ====
[2026-05-29 22:47:47] 2026-05-29 20:47:47,013 [wrapper] ==== wrapper stderr END ====
[2026-05-29 22:47:47]  *** Error codes and diagnostics ***
[2026-05-29 22:47:47]     "exeErrorCode": 0,
[2026-05-29 22:47:47]     "pilotErrorCode": 0,
[2026-05-29 22:47:47]  *** Listing of results directory ***
[2026-05-29 22:47:47] total 516424
[2026-05-29 22:47:47] -rw-r--r--. 1 boinc boinc    683926 May 29 15:03 pilot3.tar.gz
[2026-05-29 22:47:47] -rw-r--r--. 1 boinc boinc      5631 May 29 15:06 queuedata.json
[2026-05-29 22:47:47] -rwx------. 1 boinc boinc     36281 May 29 15:06 runpilot2-wrapper.sh
[2026-05-29 22:47:47] -rw-r--r--. 1 boinc boinc       100 May 29 22:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-29 22:47:47] -rwxr-xr-x. 1 boinc boinc      7986 May 29 22:23 run_atlas
[2026-05-29 22:47:47] -rw-r--r--. 1 boinc boinc       105 May 29 22:23 job.xml
[2026-05-29 22:47:47] -rw-r--r--. 1 boinc boinc      6628 May 29 22:23 init_data.xml
[2026-05-29 22:47:47] -rw-r--r--. 2 boinc boinc 296995524 May 29 22:23 EVNT.50469837._000452.pool.root.1
[2026-05-29 22:47:47] -rw-r--r--. 2 boinc boinc     15667 May 29 22:23 start_atlas.sh
[2026-05-29 22:47:47] drwxrwx--x. 2 boinc boinc      4096 May 29 22:23 shared
[2026-05-29 22:47:47] -rw-r--r--. 2 boinc boinc    697416 May 29 22:23 input.tar.gz
[2026-05-29 22:47:47] -rw-r--r--. 1 boinc boinc         0 May 29 22:23 boinc_lockfile
[2026-05-29 22:47:47] -rw-r--r--. 1 boinc boinc      2514 May 29 22:23 pandaJob.out
[2026-05-29 22:47:47] -rw-------. 1 boinc boinc    995587 May 29 22:23 agis_schedconf.cvmfs.json
[2026-05-29 22:47:47] -rw-------. 1 boinc boinc   1502789 May 29 22:23 agis_ddmendpoints.agis.ALL.json
[2026-05-29 22:47:47] -rw-------. 1 boinc boinc       444 May 29 22:23 workernode_map.json
[2026-05-29 22:47:47] drwx------. 5 boinc boinc      4096 May 29 22:23 pilot3
[2026-05-29 22:47:47] -rw-------. 1 boinc boinc 226688730 May 29 22:46 HITS.50533925._011285.pool.root.1
[2026-05-29 22:47:47] -rw-r--r--. 1 boinc boinc       486 May 29 22:46 boinc_task_state.xml
[2026-05-29 22:47:47] -rw-------. 1 boinc boinc      1023 May 29 22:47 memory_monitor_summary.json
[2026-05-29 22:47:47] -rw-------. 1 boinc boinc    327676 May 29 22:47 log.50533925._011285.job.log.tgz.1
[2026-05-29 22:47:47] -rw-------. 1 boinc boinc      6378 May 29 22:47 heartbeat_new.json
[2026-05-29 22:47:47] -rw-------. 1 boinc boinc      6269 May 29 22:47 heartbeat.json
[2026-05-29 22:47:47] -rw-r--r--. 1 boinc boinc        26 May 29 22:47 wrapper_checkpoint.txt
[2026-05-29 22:47:47] -rw-r--r--. 1 boinc boinc      8192 May 29 22:47 boinc_mmap_file
[2026-05-29 22:47:47] -rw-------. 1 boinc boinc       821 May 29 22:47 pilotlog.txt
[2026-05-29 22:47:47] -rw-------. 1 boinc boinc        95 May 29 22:47 pilot_heartbeat.json
[2026-05-29 22:47:47] -rw-------. 1 boinc boinc    181933 May 29 22:47 log.50533925._011285.job.log.1
[2026-05-29 22:47:47] -rw-------. 1 boinc boinc       357 May 29 22:47 output.list
[2026-05-29 22:47:47] -rw-r--r--. 1 boinc boinc       410 May 29 22:47 runtime_log
[2026-05-29 22:47:47] -rw-------. 1 boinc boinc    522240 May 29 22:47 result.tar.gz
[2026-05-29 22:47:47] -rw-r--r--. 1 boinc boinc      8846 May 29 22:47 runtime_log.err
[2026-05-29 22:47:47] -rw-------. 1 boinc boinc       659 May 29 22:47 8f5abf6bf911.diag
[2026-05-29 22:47:47] -rw-r--r--. 1 boinc boinc     21273 May 29 22:47 stderr.txt
[2026-05-29 22:47:47] HITS file was successfully produced:
[2026-05-29 22:47:47] -rw-------. 1 boinc boinc 226688730 May 29 22:46 shared/HITS.pool.root.1
[2026-05-29 22:47:47]  *** Contents of shared directory: ***
[2026-05-29 22:47:47] total 512632
[2026-05-29 22:47:47] -rw-r--r--. 2 boinc boinc 296995524 May 29 22:23 ATLAS.root_0
[2026-05-29 22:47:47] -rw-r--r--. 2 boinc boinc     15667 May 29 22:23 start_atlas.sh
[2026-05-29 22:47:47] -rw-r--r--. 2 boinc boinc    697416 May 29 22:23 input.tar.gz
[2026-05-29 22:47:47] -rw-------. 1 boinc boinc 226688730 May 29 22:46 HITS.pool.root.1
[2026-05-29 22:47:47] -rw-------. 1 boinc boinc    522240 May 29 22:47 result.tar.gz
22:47:48 (323438): run_atlas exited; CPU time 14797.463070
22:47:48 (323438): called boinc_finish(0)

</stderr_txt>
]]>

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