Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:48:05 (1103663): wrapper (7.7.26015): starting
21:48:05 (1103663): wrapper: running run_atlas (--nthreads 12)
[2026-05-29 21:48:05] Arguments: --nthreads 12
[2026-05-29 21:48:05] Threads: 12
[2026-05-29 21:48:05] Checking for CVMFS
[2026-05-29 21:48:05] No cvmfs_config command found, will try listing directly
[2026-05-29 21:48:05] CVMFS is ok
[2026-05-29 21:48:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-29 21:48:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-29 21:48:05] Further information can be found at the LHC@home message board.
[2026-05-29 21:48:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-29 21:48:05] Checking for apptainer binary...
[2026-05-29 21:48:05] which: no apptainer in ((null))
[2026-05-29 21:48:05] apptainer is not installed, using version from CVMFS
[2026-05-29 21:48:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-29 21:48:05] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot156/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-05-29 21:48:05] apptainer works
[2026-05-29 21:48:05] Set ATHENA_PROC_NUMBER=12
[2026-05-29 21:48:05] Set ATHENA_CORE_NUMBER=12
[2026-05-29 21:48:05] Starting ATLAS job with PandaID=7157467111
[2026-05-29 21:48:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot156/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-29 22:14:55]  *** The last 200 lines of the pilot log: ***
[2026-05-29 22:14:55]  direct_access_wan=False
[2026-05-29 22:14:55]  domain=
[2026-05-29 22:14:55]  filesize=315104
[2026-05-29 22:14:55]  filetype=log
[2026-05-29 22:14:55]  guid=7a196352-cf4f-4083-9d11-0e39b6c329d2
[2026-05-29 22:14:55]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-05-29 22:14:55]  is_altstaged=None
[2026-05-29 22:14:55]  is_tar=False
[2026-05-29 22:14:55]  lfn=log.50533925._011101.job.log.tgz.1
[2026-05-29 22:14:55]  mtime=0
[2026-05-29 22:14:55]  protocol_id=None
[2026-05-29 22:14:55]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-05-29 22:14:55]  replicas=None
[2026-05-29 22:14:55]  scope=mc23_13p6TeV
[2026-05-29 22:14:55]  status=None
[2026-05-29 22:14:55]  status_code=0
[2026-05-29 22:14:55]  storage_token=
[2026-05-29 22:14:55]  surl=/var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7157467111/log.50533925._011101.job.log.tgz.1
[2026-05-29 22:14:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/89/37/log.50533925._011101.job.log.tgz.1
[2026-05-29 22:14:55]  workdir=None
[2026-05-29 22:14:55] ]
[2026-05-29 22:14:55] 2026-05-29 20:11:31,278 | INFO     | transferring file log.50533925._011101.job.log.tgz.1 from /var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7157467111/log.50533925._011101.job.log.tgz.1 to /var/lib/
[2026-05-29 22:14:55] 2026-05-29 20:11:31,278 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7157467111/log.50533925._011101.job.log.tgz.1 /var/lib/boinc/var/slot156/slots/1/
[2026-05-29 22:14:55] 2026-05-29 20:11:31,292 | INFO     | adding to output.list: log.50533925._011101.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/89/37/log.50533925._011101.job.log.tg
[2026-05-29 22:14:55] 2026-05-29 20:11:31,292 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-05-29 22:14:55] 2026-05-29 20:11:31,292 | INFO     | summary of transferred files:
[2026-05-29 22:14:55] 2026-05-29 20:11:31,293 | INFO     |  -- lfn=log.50533925._011101.job.log.tgz.1, status_code=0, status=transferred
[2026-05-29 22:14:55] 2026-05-29 20:11:31,293 | INFO     | stage-out finished correctly
[2026-05-29 22:14:55] 2026-05-29 20:11:31,334 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-29 22:14:55] 2026-05-29 20:11:31,925 | INFO     | monitor loop #109: job 0:7157467111 is in state 'finished'
[2026-05-29 22:14:55] 2026-05-29 20:11:31,925 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-29 22:14:55] 2026-05-29 20:11:33,395 | INFO     | job 7157467111 has state=finished
[2026-05-29 22:14:55] 2026-05-29 20:11:33,395 | INFO     | preparing for final server update for job 7157467111 in state='finished'
[2026-05-29 22:14:55] 2026-05-29 20:11:33,395 | INFO     | reading metadata from: /var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7157467111/jobReport.json
[2026-05-29 22:14:55] 2026-05-29 20:11:33,396 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot156/slots/1/workernode_map.json
[2026-05-29 22:14:55] 2026-05-29 20:11:33,397 | INFO     | this job has now completed (state=finished)
[2026-05-29 22:14:55] 2026-05-29 20:11:33,397 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-29 22:14:55] 2026-05-29 20:11:33,397 | INFO     | log transfer has been attempted: DONE
[2026-05-29 22:14:55] 2026-05-29 20:11:33,397 | INFO     | job 7157467111 has finished - writing final server update
[2026-05-29 22:14:55] 2026-05-29 20:11:33,397 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1676477/.job.ad'
[2026-05-29 22:14:55] 2026-05-29 20:11:33,397 | INFO     | total number of processed events: 400 (read)
[2026-05-29 22:14:55] 2026-05-29 20:11:33,413 | INFO     | using path: /var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7157467111/memory_monitor_summary.json (trf name=prmon)
[2026-05-29 22:14:55] 2026-05-29 20:11:33,414 | INFO     | extracted standard info from prmon json
[2026-05-29 22:14:55] 2026-05-29 20:11:33,414 | INFO     | extracted standard memory fields from prmon json
[2026-05-29 22:14:55] 2026-05-29 20:11:33,414 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-29 22:14:55] 2026-05-29 20:11:33,414 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-29 22:14:55] 2026-05-29 20:11:33,414 | INFO     | fitting pss+swap vs Time
[2026-05-29 22:14:55] 2026-05-29 20:11:33,414 | INFO     | sum of square deviations: 1265140.0
[2026-05-29 22:14:55] 2026-05-29 20:11:33,414 | INFO     | sum of deviations: -55552334.0
[2026-05-29 22:14:55] 2026-05-29 20:11:33,415 | INFO     | mean x (centered): 0.0
[2026-05-29 22:14:55] 2026-05-29 20:11:33,415 | INFO     | mean y: 2836783.0
[2026-05-29 22:14:55] 2026-05-29 20:11:33,415 | INFO     | intersect: 2836783.0
[2026-05-29 22:14:55] 2026-05-29 20:11:33,415 | INFO     | chi2: 0.0002215817943412653
[2026-05-29 22:14:55] 2026-05-29 20:11:33,415 | INFO     | current memory leak: -43.91 B/s (using 16 data points, chi2=0.00)
[2026-05-29 22:14:55] 2026-05-29 20:11:33,415 | INFO     | could have reported an average CPU frequency of 3646 MHz (4 samples)
[2026-05-29 22:14:55] 2026-05-29 20:11:33,415 | INFO     | ..............................
[2026-05-29 22:14:55] 2026-05-29 20:11:33,415 | INFO     | . Timing measurements:
[2026-05-29 22:14:55] 2026-05-29 20:11:33,415 | INFO     | . get job = 0 s
[2026-05-29 22:14:55] 2026-05-29 20:11:33,415 | INFO     | . initial setup = 3 s
[2026-05-29 22:14:55] 2026-05-29 20:11:33,415 | INFO     | . payload setup = 3 s
[2026-05-29 22:14:55] 2026-05-29 20:11:33,415 | INFO     | . stage-in = 0 s
[2026-05-29 22:14:55] 2026-05-29 20:11:33,415 | INFO     | . payload execution = 1377 s
[2026-05-29 22:14:55] 2026-05-29 20:11:33,415 | INFO     | . stage-out = 0 s
[2026-05-29 22:14:55] 2026-05-29 20:11:33,415 | INFO     | . log creation = 0 s
[2026-05-29 22:14:55] 2026-05-29 20:11:33,415 | INFO     | ..............................
[2026-05-29 22:14:55] 2026-05-29 20:11:33,849 | INFO     | 
[2026-05-29 22:14:55] 2026-05-29 20:11:33,849 | INFO     | job summary report
[2026-05-29 22:14:55] 2026-05-29 20:11:33,849 | INFO     | --------------------------------------------------
[2026-05-29 22:14:55] 2026-05-29 20:11:33,849 | INFO     | PanDA job id: 7157467111
[2026-05-29 22:14:55] 2026-05-29 20:11:33,849 | INFO     | task id: 50533925
[2026-05-29 22:14:55] 2026-05-29 20:11:33,849 | INFO     | errors: (none)
[2026-05-29 22:14:55] 2026-05-29 20:11:33,849 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-29 22:14:55] 2026-05-29 20:11:33,849 | INFO     | pilot state: finished 
[2026-05-29 22:14:55] 2026-05-29 20:11:33,849 | INFO     | transexitcode: 0
[2026-05-29 22:14:55] 2026-05-29 20:11:33,849 | INFO     | exeerrorcode: 0
[2026-05-29 22:14:55] 2026-05-29 20:11:33,849 | INFO     | exeerrordiag: 
[2026-05-29 22:14:55] 2026-05-29 20:11:33,849 | INFO     | exitcode: 0
[2026-05-29 22:14:55] 2026-05-29 20:11:33,849 | INFO     | exitmsg: OK
[2026-05-29 22:14:55] 2026-05-29 20:11:33,849 | INFO     | cpuconsumptiontime: 14811 s
[2026-05-29 22:14:55] 2026-05-29 20:11:33,849 | INFO     | nevents: 400
[2026-05-29 22:14:55] 2026-05-29 20:11:33,849 | INFO     | neventsw: 0
[2026-05-29 22:14:55] 2026-05-29 20:11:33,849 | INFO     | pid: 1114672
[2026-05-29 22:14:55] 2026-05-29 20:11:33,849 | INFO     | pgrp: 1114672
[2026-05-29 22:14:55] 2026-05-29 20:11:33,849 | INFO     | corecount: 12
[2026-05-29 22:14:55] 2026-05-29 20:11:33,849 | INFO     | event service: False
[2026-05-29 22:14:55] 2026-05-29 20:11:33,849 | INFO     | sizes: {0: 2267517, 11: 2267517, 1385: 2292258, 1387: 2301336, 1389: 2301474}
[2026-05-29 22:14:55] 2026-05-29 20:11:33,849 | INFO     | --------------------------------------------------
[2026-05-29 22:14:55] 2026-05-29 20:11:33,849 | INFO     | 
[2026-05-29 22:14:55] 2026-05-29 20:11:33,850 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot156/slots/1
[2026-05-29 22:14:55] 2026-05-29 20:11:33,865 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-29 22:14:55] 2026-05-29 20:11:33,865 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-29 22:14:55] 2026-05-29 20:11:33,865 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-29 22:14:55] 2026-05-29 20:11:33,865 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-29 22:14:55] 2026-05-29 20:11:33,865 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-29 22:14:55] 2026-05-29 20:11:33,865 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-29 22:14:55] 2026-05-29 20:11:33,865 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-29 22:14:55] 2026-05-29 20:11:33,865 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-29 22:14:55] 2026-05-29 20:11:33,865 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-29 22:14:55] 2026-05-29 20:11:33,865 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-29 22:14:55] 2026-05-29 20:11:33,865 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-29 22:14:55] 2026-05-29 20:11:33,865 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-29 22:14:55] 2026-05-29 20:11:33,865 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-29 22:14:55] 2026-05-29 20:11:33,865 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-29 22:14:55] 2026-05-29 20:11:33,865 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-29 22:14:55] 2026-05-29 20:11:33,865 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-29 22:14:55] 2026-05-29 20:11:33,865 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-29 22:14:55] 2026-05-29 20:11:33,865 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-29 22:14:55] 2026-05-29 20:11:33,865 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-29 22:14:55] 2026-05-29 20:11:33,865 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-29 22:14:55] 2026-05-29 20:11:33,865 | INFO     | job 7157467111 has completed (purged errors)
[2026-05-29 22:14:55] 2026-05-29 20:11:33,865 | INFO     | overall cleanup function is called
[2026-05-29 22:14:55] 2026-05-29 20:11:34,872 | INFO     | --- collectZombieJob: --- 10, [1114672]
[2026-05-29 22:14:55] 2026-05-29 20:11:34,872 | INFO     | zombie collector waiting for pid 1114672
[2026-05-29 22:14:55] 2026-05-29 20:11:34,873 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-29 22:14:55] 2026-05-29 20:11:34,873 | INFO     | collected zombie processes
[2026-05-29 22:14:55] 2026-05-29 20:11:34,873 | INFO     | will attempt to kill all subprocesses of pid=1114672
[2026-05-29 22:14:55] 2026-05-29 20:11:35,130 | INFO     | process IDs to be killed: [1114672] (in reverse order)
[2026-05-29 22:14:55] 2026-05-29 20:11:35,268 | WARNING  | found no corresponding commands to process id(s)
[2026-05-29 22:14:55] 2026-05-29 20:11:35,268 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-29 22:14:55] 2026-05-29 20:11:35,289 | INFO     | did not find any defunct processes belonging to 1114672
[2026-05-29 22:14:55] 2026-05-29 20:11:35,308 | INFO     | did not find any defunct processes belonging to 1114672
[2026-05-29 22:14:55] 2026-05-29 20:11:35,308 | INFO     | Ready for new job
[2026-05-29 22:14:55] 2026-05-29 20:11:35,309 | INFO     | ***************************************
[2026-05-29 22:14:55] 2026-05-29 20:11:35,309 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-29 22:14:55] 2026-05-29 20:11:35,309 | INFO     | ***************************************
[2026-05-29 22:14:55] 2026-05-29 20:11:35,309 | INFO     | 
[2026-05-29 22:14:55] 2026-05-29 20:11:35,314 | INFO     | architecture information:
[2026-05-29 22:14:55] 2026-05-29 20:11:35,315 | INFO     | executing command: cat /etc/os-release
[2026-05-29 22:14:55] 2026-05-29 20:11:35,326 | INFO     | cat /etc/os-release:
[2026-05-29 22:14:55] NAME="CentOS Linux"
[2026-05-29 22:14:55] VERSION="7 (Core)"
[2026-05-29 22:14:55] ID="centos"
[2026-05-29 22:14:55] ID_LIKE="rhel fedora"
[2026-05-29 22:14:55] VERSION_ID="7"
[2026-05-29 22:14:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-29 22:14:55] ANSI_COLOR="0;31"
[2026-05-29 22:14:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-29 22:14:55] HOME_URL="https://www.centos.org/"
[2026-05-29 22:14:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-29 22:14:55] 
[2026-05-29 22:14:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-29 22:14:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-29 22:14:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-29 22:14:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-29 22:14:55] 
[2026-05-29 22:14:55] 2026-05-29 20:11:35,326 | INFO     | ***************************************
[2026-05-29 22:14:55] 2026-05-29 20:11:35,829 | INFO     | executing command: df -mP /var/lib/boinc/var/slot156/slots/1
[2026-05-29 22:14:55] 2026-05-29 20:11:35,842 | INFO     | sufficient remaining disk space (329504522240 B)
[2026-05-29 22:14:55] 2026-05-29 20:11:35,843 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-29 22:14:55] 2026-05-29 20:11:35,843 | INFO     | current server update state: UPDATING_FINAL
[2026-05-29 22:14:55] 2026-05-29 20:11:35,843 | INFO     | update_server=False
[2026-05-29 22:14:55] 2026-05-29 20:11:35,843 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-29 22:14:55] 2026-05-29 20:11:35,843 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-29 22:14:55] 2026-05-29 20:11:35,843 | INFO     | aborting loop
[2026-05-29 22:14:55] 2026-05-29 20:11:36,001 | INFO     | all job control threads have been joined
[2026-05-29 22:14:55] 2026-05-29 20:11:36,291 | INFO     | all payload control threads have been joined
[2026-05-29 22:14:55] 2026-05-29 20:11:36,629 | INFO     | all data control threads have been joined
[2026-05-29 22:14:55] 2026-05-29 20:11:36,842 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-29 22:14:55] 2026-05-29 20:11:36,847 | INFO     | [job] retrieve thread has finished
[2026-05-29 22:14:55] 2026-05-29 20:11:36,848 | INFO     | [job] job monitor thread has finished
[2026-05-29 22:14:55] 2026-05-29 20:11:37,006 | INFO     | [job] control thread has finished
[2026-05-29 22:14:55] 2026-05-29 20:11:37,091 | INFO     | [payload] validate_post thread has finished
[2026-05-29 22:14:55] 2026-05-29 20:11:37,297 | INFO     | [payload] control thread has finished
[2026-05-29 22:14:55] 2026-05-29 20:11:37,379 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-29 22:14:55] 2026-05-29 20:11:37,635 | INFO     | [data] control thread has finished
[2026-05-29 22:14:55] 2026-05-29 20:11:37,714 | INFO     | [payload] execute_payloads thread has finished
[2026-05-29 22:14:55] 2026-05-29 20:11:37,878 | INFO     | [job] create_data_payload thread has finished
[2026-05-29 22:14:55] 2026-05-29 20:11:37,897 | INFO     | [payload] validate_pre thread has finished
[2026-05-29 22:14:55] 2026-05-29 20:11:37,965 | INFO     | [job] validate thread has finished
[2026-05-29 22:14:55] 2026-05-29 20:11:38,141 | INFO     | [payload] failed_post thread has finished
[2026-05-29 22:14:55] 2026-05-29 20:11:38,153 | INFO     | [data] copytool_in thread has finished
[2026-05-29 22:14:55] 2026-05-29 20:11:38,468 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-29 22:14:55] 2026-05-29 20:11:38,848 | INFO     | [data] copytool_out thread has finished
[2026-05-29 22:14:55] 2026-05-29 20:11:39,473 | INFO     | [job] queue monitor thread has finished
[2026-05-29 22:14:55] 2026-05-29 20:11:41,385 | INFO     | [data] queue_monitor thread has finished
[2026-05-29 22:14:55] 2026-05-29 20:11:46,227 | INFO     | job.realtimelogging is not enabled
[2026-05-29 22:14:55] 2026-05-29 20:11:47,233 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-29 22:14:55] 2026-05-29 20:12:05,550 | INFO     | PID=1108583 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-29 22:14:55] 2026-05-29 20:12:05,555 | INFO     | .. there are 7 such processes running
[2026-05-29 22:14:55] 2026-05-29 20:12:05,556 | INFO     | found 0 job(s) in 20 queues
[2026-05-29 22:14:55] 2026-05-29 20:12:05,556 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-29 22:14:55] 2026-05-29 20:12:05,556 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-29 22:14:55] 2026-05-29 20:12:14,681 | INFO     | [monitor] cgroup control has ended
[2026-05-29 22:14:55] 2026-05-29 20:12:15,154 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22386637907776)>', '<ExcThread(monitor, started 22386398467840)>']
[2026-05-29 22:14:55] 2026-05-29 20:12:15,607 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-29 22:14:55] 2026-05-29 20:12:15,607 | INFO     | [monitor] control thread has ended
[2026-05-29 22:14:55] 2026-05-29 20:12:20,180 | INFO     | all workflow threads have been joined
[2026-05-29 22:14:55] 2026-05-29 20:12:20,180 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-29 22:14:55] 2026-05-29 20:12:20,180 | INFO     | traces error code: 0
[2026-05-29 22:14:55] 2026-05-29 20:12:20,180 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-29 22:14:55] 2026-05-29 20:12:20,272 [wrapper] ==== pilot stdout END ====
[2026-05-29 22:14:55] 2026-05-29 20:12:20,274 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-29 22:14:55] 2026-05-29 20:12:20,276 [wrapper] pilotpid: 1108583
[2026-05-29 22:14:55] 2026-05-29 20:12:20,278 [wrapper] Pilot exit status: 0
[2026-05-29 22:14:55] 2026-05-29 20:12:20,286 [wrapper] pandaids: 7157467111
[2026-05-29 22:14:55] 2026-05-29 20:12:20,387 [wrapper] cleanup supervisor_pilot 1202129 1108584
[2026-05-29 22:14:55] 2026-05-29 20:12:20,389 [wrapper] Test setup, not cleaning
[2026-05-29 22:14:55] 2026-05-29 20:12:20,391 [wrapper] apfmon messages muted
[2026-05-29 22:14:55] 2026-05-29 20:12:20,393 [wrapper] ==== wrapper stdout END ====
[2026-05-29 22:14:55] 2026-05-29 20:12:20,394 [wrapper] ==== wrapper stderr END ====
[2026-05-29 22:14:55]  *** Error codes and diagnostics ***
[2026-05-29 22:14:55]     "exeErrorCode": 0,
[2026-05-29 22:14:55]     "pilotErrorCode": 0,
[2026-05-29 22:14:55]  *** Listing of results directory ***
[2026-05-29 22:14:55] total 508860
[2026-05-29 22:14:55] -rw-r--r--. 1 boinc boinc    683926 May 29 15:03 pilot3.tar.gz
[2026-05-29 22:14:55] -rw-r--r--. 1 boinc boinc      5631 May 29 15:03 queuedata.json
[2026-05-29 22:14:55] -rwx------. 1 boinc boinc     36281 May 29 15:03 runpilot2-wrapper.sh
[2026-05-29 22:14:55] -rw-r--r--. 1 boinc boinc       100 May 29 20:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-29 22:14:55] -rwxr-xr-x. 1 boinc boinc      7986 May 29 20:32 run_atlas
[2026-05-29 22:14:55] -rw-r--r--. 1 boinc boinc       105 May 29 20:32 job.xml
[2026-05-29 22:14:55] -rw-r--r--. 2 boinc boinc 296603432 May 29 21:48 EVNT.50469837._000445.pool.root.1
[2026-05-29 22:14:55] -rw-r--r--. 2 boinc boinc     15667 May 29 21:48 start_atlas.sh
[2026-05-29 22:14:55] drwxrwx--x. 2 boinc boinc      4096 May 29 21:48 shared
[2026-05-29 22:14:55] -rw-r--r--. 2 boinc boinc    697406 May 29 21:48 input.tar.gz
[2026-05-29 22:14:55] -rw-r--r--. 1 boinc boinc      6630 May 29 21:48 init_data.xml
[2026-05-29 22:14:55] -rw-r--r--. 1 boinc boinc         0 May 29 21:48 boinc_lockfile
[2026-05-29 22:14:55] -rw-r--r--. 1 boinc boinc      2511 May 29 21:48 pandaJob.out
[2026-05-29 22:14:55] -rw-------. 1 boinc boinc    995587 May 29 21:48 agis_schedconf.cvmfs.json
[2026-05-29 22:14:55] -rw-------. 1 boinc boinc   1502789 May 29 21:48 agis_ddmendpoints.agis.ALL.json
[2026-05-29 22:14:55] -rw-------. 1 boinc boinc       444 May 29 21:48 workernode_map.json
[2026-05-29 22:14:55] drwx------. 5 boinc boinc      4096 May 29 21:48 pilot3
[2026-05-29 22:14:55] -rw-r--r--. 1 boinc boinc       486 May 29 22:11 boinc_task_state.xml
[2026-05-29 22:14:55] -rw-------. 1 boinc boinc 219361206 May 29 22:11 HITS.50533925._011101.pool.root.1
[2026-05-29 22:14:55] -rw-------. 1 boinc boinc      1031 May 29 22:11 memory_monitor_summary.json
[2026-05-29 22:14:55] -rw-------. 1 boinc boinc    315104 May 29 22:11 log.50533925._011101.job.log.tgz.1
[2026-05-29 22:14:55] -rw-------. 1 boinc boinc      6377 May 29 22:11 heartbeat_new.json
[2026-05-29 22:14:55] -rw-------. 1 boinc boinc      6268 May 29 22:11 heartbeat.json
[2026-05-29 22:14:55] -rw-------. 1 boinc boinc        95 May 29 22:12 pilot_heartbeat.json
[2026-05-29 22:14:55] -rw-------. 1 boinc boinc      4905 May 29 22:12 pilotlog.txt
[2026-05-29 22:14:55] -rw-------. 1 boinc boinc    180557 May 29 22:12 log.50533925._011101.job.log.1
[2026-05-29 22:14:55] -rw-------. 1 boinc boinc       357 May 29 22:12 output.list
[2026-05-29 22:14:55] -rw-r--r--. 1 boinc boinc       410 May 29 22:12 runtime_log
[2026-05-29 22:14:55] -rw-------. 1 boinc boinc    512000 May 29 22:12 result.tar.gz
[2026-05-29 22:14:55] -rw-r--r--. 1 boinc boinc      8846 May 29 22:12 runtime_log.err
[2026-05-29 22:14:55] -rw-------. 1 boinc boinc       657 May 29 22:12 8e9b9b480a4d.diag
[2026-05-29 22:14:55] -rw-r--r--. 1 boinc boinc        26 May 29 22:14 wrapper_checkpoint.txt
[2026-05-29 22:14:55] -rw-r--r--. 1 boinc boinc      8192 May 29 22:14 boinc_mmap_file
[2026-05-29 22:14:55] -rw-r--r--. 1 boinc boinc     16455 May 29 22:14 stderr.txt
[2026-05-29 22:14:55] HITS file was successfully produced:
[2026-05-29 22:14:55] -rw-------. 1 boinc boinc 219361206 May 29 22:11 shared/HITS.pool.root.1
[2026-05-29 22:14:55]  *** Contents of shared directory: ***
[2026-05-29 22:14:55] total 505080
[2026-05-29 22:14:55] -rw-r--r--. 2 boinc boinc 296603432 May 29 21:48 ATLAS.root_0
[2026-05-29 22:14:55] -rw-r--r--. 2 boinc boinc     15667 May 29 21:48 start_atlas.sh
[2026-05-29 22:14:55] -rw-r--r--. 2 boinc boinc    697406 May 29 21:48 input.tar.gz
[2026-05-29 22:14:55] -rw-------. 1 boinc boinc 219361206 May 29 22:11 HITS.pool.root.1
[2026-05-29 22:14:55] -rw-------. 1 boinc boinc    512000 May 29 22:12 result.tar.gz
22:14:56 (1103663): run_atlas exited; CPU time 14832.219299
22:14:56 (1103663): called boinc_finish(0)

</stderr_txt>
]]>

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