Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:54:12 (580095): wrapper (7.7.26015): starting
18:54:12 (580095): wrapper: running run_atlas (--nthreads 12)
[2026-05-29 18:54:12] Arguments: --nthreads 12
[2026-05-29 18:54:12] Threads: 12
[2026-05-29 18:54:12] Checking for CVMFS
[2026-05-29 18:54:12] No cvmfs_config command found, will try listing directly
[2026-05-29 18:54:12] CVMFS is ok
[2026-05-29 18:54:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-29 18:54:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-29 18:54:12] Further information can be found at the LHC@home message board.
[2026-05-29 18:54:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-29 18:54:12] Checking for apptainer binary...
[2026-05-29 18:54:12] which: no apptainer in ((null))
[2026-05-29 18:54:12] apptainer is not installed, using version from CVMFS
[2026-05-29 18:54:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-29 18:54:12] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot156/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-05-29 18:54:12] apptainer works
[2026-05-29 18:54:12] Set ATHENA_PROC_NUMBER=12
[2026-05-29 18:54:12] Set ATHENA_CORE_NUMBER=12
[2026-05-29 18:54:12] Starting ATLAS job with PandaID=7157463739
[2026-05-29 18:54:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot156/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-29 19:28:14]  *** The last 200 lines of the pilot log: ***
[2026-05-29 19:28:14]  direct_access_lan=False
[2026-05-29 19:28:14]  direct_access_wan=False
[2026-05-29 19:28:14]  domain=
[2026-05-29 19:28:14]  filesize=326715
[2026-05-29 19:28:14]  filetype=log
[2026-05-29 19:28:14]  guid=db3071b5-41e5-4d49-9343-bf98d1be749b
[2026-05-29 19:28:14]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-05-29 19:28:14]  is_altstaged=None
[2026-05-29 19:28:14]  is_tar=False
[2026-05-29 19:28:14]  lfn=log.50533925._009033.job.log.tgz.1
[2026-05-29 19:28:14]  mtime=0
[2026-05-29 19:28:14]  protocol_id=None
[2026-05-29 19:28:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-05-29 19:28:14]  replicas=None
[2026-05-29 19:28:14]  scope=mc23_13p6TeV
[2026-05-29 19:28:14]  status=None
[2026-05-29 19:28:14]  status_code=0
[2026-05-29 19:28:14]  storage_token=
[2026-05-29 19:28:14]  surl=/var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7157463739/log.50533925._009033.job.log.tgz.1
[2026-05-29 19:28:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ce/db/log.50533925._009033.job.log.tgz.1
[2026-05-29 19:28:14]  workdir=None
[2026-05-29 19:28:14] ]
[2026-05-29 19:28:14] 2026-05-29 17:21:06,900 | INFO     | transferring file log.50533925._009033.job.log.tgz.1 from /var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7157463739/log.50533925._009033.job.log.tgz.1 to /var/lib/
[2026-05-29 19:28:14] 2026-05-29 17:21:06,900 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7157463739/log.50533925._009033.job.log.tgz.1 /var/lib/boinc/var/slot156/slots/1/
[2026-05-29 19:28:14] 2026-05-29 17:21:06,914 | INFO     | adding to output.list: log.50533925._009033.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ce/db/log.50533925._009033.job.log.tg
[2026-05-29 19:28:14] 2026-05-29 17:21:06,915 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-05-29 19:28:14] 2026-05-29 17:21:06,915 | INFO     | summary of transferred files:
[2026-05-29 19:28:14] 2026-05-29 17:21:06,915 | INFO     |  -- lfn=log.50533925._009033.job.log.tgz.1, status_code=0, status=transferred
[2026-05-29 19:28:14] 2026-05-29 17:21:06,915 | INFO     | stage-out finished correctly
[2026-05-29 19:28:14] 2026-05-29 17:21:06,958 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-29 19:28:14] 2026-05-29 17:21:08,710 | INFO     | monitor loop #124: job 0:7157463739 is in state 'finished'
[2026-05-29 19:28:14] 2026-05-29 17:21:08,710 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-29 19:28:14] 2026-05-29 17:21:09,588 | INFO     | job 7157463739 has state=finished
[2026-05-29 19:28:14] 2026-05-29 17:21:09,589 | INFO     | preparing for final server update for job 7157463739 in state='finished'
[2026-05-29 19:28:14] 2026-05-29 17:21:09,589 | INFO     | reading metadata from: /var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7157463739/jobReport.json
[2026-05-29 19:28:14] 2026-05-29 17:21:09,590 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot156/slots/1/workernode_map.json
[2026-05-29 19:28:14] 2026-05-29 17:21:09,590 | INFO     | this job has now completed (state=finished)
[2026-05-29 19:28:14] 2026-05-29 17:21:09,590 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-29 19:28:14] 2026-05-29 17:21:09,590 | INFO     | log transfer has been attempted: DONE
[2026-05-29 19:28:14] 2026-05-29 17:21:09,591 | INFO     | job 7157463739 has finished - writing final server update
[2026-05-29 19:28:14] 2026-05-29 17:21:09,591 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1676477/.job.ad'
[2026-05-29 19:28:14] 2026-05-29 17:21:09,591 | INFO     | total number of processed events: 400 (read)
[2026-05-29 19:28:14] 2026-05-29 17:21:09,607 | INFO     | using path: /var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7157463739/memory_monitor_summary.json (trf name=prmon)
[2026-05-29 19:28:14] 2026-05-29 17:21:09,608 | INFO     | extracted standard info from prmon json
[2026-05-29 19:28:14] 2026-05-29 17:21:09,608 | INFO     | extracted standard memory fields from prmon json
[2026-05-29 19:28:14] 2026-05-29 17:21:09,608 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-29 19:28:14] 2026-05-29 17:21:09,608 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-29 19:28:14] 2026-05-29 17:21:09,609 | INFO     | fitting pss+swap vs Time
[2026-05-29 19:28:14] 2026-05-29 17:21:09,609 | INFO     | sum of square deviations: 2120970.0
[2026-05-29 19:28:14] 2026-05-29 17:21:09,609 | INFO     | sum of deviations: -41130409.0
[2026-05-29 19:28:14] 2026-05-29 17:21:09,609 | INFO     | mean x (centered): 0.0
[2026-05-29 19:28:14] 2026-05-29 17:21:09,609 | INFO     | mean y: 2775575.1578947366
[2026-05-29 19:28:14] 2026-05-29 17:21:09,609 | INFO     | intersect: 2775575.1578947366
[2026-05-29 19:28:14] 2026-05-29 17:21:09,609 | INFO     | chi2: 0.0006952923953451016
[2026-05-29 19:28:14] 2026-05-29 17:21:09,609 | INFO     | current memory leak: -19.39 B/s (using 19 data points, chi2=0.00)
[2026-05-29 19:28:14] 2026-05-29 17:21:09,609 | INFO     | could have reported an average CPU frequency of 3649 MHz (4 samples)
[2026-05-29 19:28:14] 2026-05-29 17:21:09,610 | INFO     | ..............................
[2026-05-29 19:28:14] 2026-05-29 17:21:09,610 | INFO     | . Timing measurements:
[2026-05-29 19:28:14] 2026-05-29 17:21:09,610 | INFO     | . get job = 0 s
[2026-05-29 19:28:14] 2026-05-29 17:21:09,610 | INFO     | . initial setup = 3 s
[2026-05-29 19:28:14] 2026-05-29 17:21:09,610 | INFO     | . payload setup = 4 s
[2026-05-29 19:28:14] 2026-05-29 17:21:09,610 | INFO     | . stage-in = 0 s
[2026-05-29 19:28:14] 2026-05-29 17:21:09,610 | INFO     | . payload execution = 1586 s
[2026-05-29 19:28:14] 2026-05-29 17:21:09,610 | INFO     | . stage-out = 0 s
[2026-05-29 19:28:14] 2026-05-29 17:21:09,610 | INFO     | . log creation = 0 s
[2026-05-29 19:28:14] 2026-05-29 17:21:09,610 | INFO     | ..............................
[2026-05-29 19:28:14] 2026-05-29 17:21:09,653 | INFO     | 
[2026-05-29 19:28:14] 2026-05-29 17:21:09,653 | INFO     | job summary report
[2026-05-29 19:28:14] 2026-05-29 17:21:09,653 | INFO     | --------------------------------------------------
[2026-05-29 19:28:14] 2026-05-29 17:21:09,653 | INFO     | PanDA job id: 7157463739
[2026-05-29 19:28:14] 2026-05-29 17:21:09,653 | INFO     | task id: 50533925
[2026-05-29 19:28:14] 2026-05-29 17:21:09,653 | INFO     | errors: (none)
[2026-05-29 19:28:14] 2026-05-29 17:21:09,653 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-29 19:28:14] 2026-05-29 17:21:09,653 | INFO     | pilot state: finished 
[2026-05-29 19:28:14] 2026-05-29 17:21:09,653 | INFO     | transexitcode: 0
[2026-05-29 19:28:14] 2026-05-29 17:21:09,653 | INFO     | exeerrorcode: 0
[2026-05-29 19:28:14] 2026-05-29 17:21:09,653 | INFO     | exeerrordiag: 
[2026-05-29 19:28:14] 2026-05-29 17:21:09,653 | INFO     | exitcode: 0
[2026-05-29 19:28:14] 2026-05-29 17:21:09,654 | INFO     | exitmsg: OK
[2026-05-29 19:28:14] 2026-05-29 17:21:09,654 | INFO     | cpuconsumptiontime: 16933 s
[2026-05-29 19:28:14] 2026-05-29 17:21:09,654 | INFO     | nevents: 400
[2026-05-29 19:28:14] 2026-05-29 17:21:09,654 | INFO     | neventsw: 0
[2026-05-29 19:28:14] 2026-05-29 17:21:09,654 | INFO     | pid: 591286
[2026-05-29 19:28:14] 2026-05-29 17:21:09,654 | INFO     | pgrp: 591286
[2026-05-29 19:28:14] 2026-05-29 17:21:09,654 | INFO     | corecount: 12
[2026-05-29 19:28:14] 2026-05-29 17:21:09,654 | INFO     | event service: False
[2026-05-29 19:28:14] 2026-05-29 17:21:09,654 | INFO     | sizes: {0: 2267520, 11: 2267520, 1594: 2292317, 1595: 2301395, 1597: 2301533}
[2026-05-29 19:28:14] 2026-05-29 17:21:09,654 | INFO     | --------------------------------------------------
[2026-05-29 19:28:14] 2026-05-29 17:21:09,654 | INFO     | 
[2026-05-29 19:28:14] 2026-05-29 17:21:09,654 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot156/slots/1
[2026-05-29 19:28:14] 2026-05-29 17:21:09,669 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-29 19:28:14] 2026-05-29 17:21:09,670 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-29 19:28:14] 2026-05-29 17:21:09,670 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-29 19:28:14] 2026-05-29 17:21:09,670 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-29 19:28:14] 2026-05-29 17:21:09,670 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-29 19:28:14] 2026-05-29 17:21:09,670 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-29 19:28:14] 2026-05-29 17:21:09,670 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-29 19:28:14] 2026-05-29 17:21:09,670 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-29 19:28:14] 2026-05-29 17:21:09,670 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-29 19:28:14] 2026-05-29 17:21:09,670 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-29 19:28:14] 2026-05-29 17:21:09,670 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-29 19:28:14] 2026-05-29 17:21:09,670 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-29 19:28:14] 2026-05-29 17:21:09,670 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-29 19:28:14] 2026-05-29 17:21:09,670 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-29 19:28:14] 2026-05-29 17:21:09,670 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-29 19:28:14] 2026-05-29 17:21:09,670 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-29 19:28:14] 2026-05-29 17:21:09,670 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-29 19:28:14] 2026-05-29 17:21:09,670 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-29 19:28:14] 2026-05-29 17:21:09,670 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-29 19:28:14] 2026-05-29 17:21:09,670 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-29 19:28:14] 2026-05-29 17:21:09,670 | INFO     | job 7157463739 has completed (purged errors)
[2026-05-29 19:28:14] 2026-05-29 17:21:09,670 | INFO     | overall cleanup function is called
[2026-05-29 19:28:14] 2026-05-29 17:21:10,676 | INFO     | --- collectZombieJob: --- 10, [591286]
[2026-05-29 19:28:14] 2026-05-29 17:21:10,676 | INFO     | zombie collector waiting for pid 591286
[2026-05-29 19:28:14] 2026-05-29 17:21:10,677 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-29 19:28:14] 2026-05-29 17:21:10,677 | INFO     | collected zombie processes
[2026-05-29 19:28:14] 2026-05-29 17:21:10,677 | INFO     | will attempt to kill all subprocesses of pid=591286
[2026-05-29 19:28:14] 2026-05-29 17:21:10,957 | INFO     | process IDs to be killed: [591286] (in reverse order)
[2026-05-29 19:28:14] 2026-05-29 17:21:11,101 | WARNING  | found no corresponding commands to process id(s)
[2026-05-29 19:28:14] 2026-05-29 17:21:11,101 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-29 19:28:14] 2026-05-29 17:21:11,124 | INFO     | did not find any defunct processes belonging to 591286
[2026-05-29 19:28:14] 2026-05-29 17:21:11,146 | INFO     | did not find any defunct processes belonging to 591286
[2026-05-29 19:28:14] 2026-05-29 17:21:11,146 | INFO     | Ready for new job
[2026-05-29 19:28:14] 2026-05-29 17:21:11,147 | INFO     | ***************************************
[2026-05-29 19:28:14] 2026-05-29 17:21:11,147 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-29 19:28:14] 2026-05-29 17:21:11,147 | INFO     | ***************************************
[2026-05-29 19:28:14] 2026-05-29 17:21:11,147 | INFO     | 
[2026-05-29 19:28:14] 2026-05-29 17:21:11,152 | INFO     | architecture information:
[2026-05-29 19:28:14] 2026-05-29 17:21:11,153 | INFO     | executing command: cat /etc/os-release
[2026-05-29 19:28:14] 2026-05-29 17:21:11,166 | INFO     | cat /etc/os-release:
[2026-05-29 19:28:14] NAME="CentOS Linux"
[2026-05-29 19:28:14] VERSION="7 (Core)"
[2026-05-29 19:28:14] ID="centos"
[2026-05-29 19:28:14] ID_LIKE="rhel fedora"
[2026-05-29 19:28:14] VERSION_ID="7"
[2026-05-29 19:28:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-29 19:28:14] ANSI_COLOR="0;31"
[2026-05-29 19:28:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-29 19:28:14] HOME_URL="https://www.centos.org/"
[2026-05-29 19:28:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-29 19:28:14] 
[2026-05-29 19:28:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-29 19:28:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-29 19:28:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-29 19:28:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-29 19:28:14] 
[2026-05-29 19:28:14] 2026-05-29 17:21:11,166 | INFO     | ***************************************
[2026-05-29 19:28:14] 2026-05-29 17:21:11,669 | INFO     | executing command: df -mP /var/lib/boinc/var/slot156/slots/1
[2026-05-29 19:28:14] 2026-05-29 17:21:11,683 | INFO     | sufficient remaining disk space (328931999744 B)
[2026-05-29 19:28:14] 2026-05-29 17:21:11,683 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-29 19:28:14] 2026-05-29 17:21:11,683 | INFO     | current server update state: UPDATING_FINAL
[2026-05-29 19:28:14] 2026-05-29 17:21:11,683 | INFO     | update_server=False
[2026-05-29 19:28:14] 2026-05-29 17:21:11,683 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-29 19:28:14] 2026-05-29 17:21:12,115 | INFO     | all payload control threads have been joined
[2026-05-29 19:28:14] 2026-05-29 17:21:12,219 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-29 19:28:14] 2026-05-29 17:21:12,219 | INFO     | aborting loop
[2026-05-29 19:28:14] 2026-05-29 17:21:12,303 | INFO     | all data control threads have been joined
[2026-05-29 19:28:14] 2026-05-29 17:21:12,306 | INFO     | all job control threads have been joined
[2026-05-29 19:28:14] 2026-05-29 17:21:12,467 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-29 19:28:14] 2026-05-29 17:21:12,688 | INFO     | [job] retrieve thread has finished
[2026-05-29 19:28:14] 2026-05-29 17:21:12,947 | INFO     | [payload] failed_post thread has finished
[2026-05-29 19:28:14] 2026-05-29 17:21:13,005 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-29 19:28:14] 2026-05-29 17:21:13,120 | INFO     | [payload] control thread has finished
[2026-05-29 19:28:14] 2026-05-29 17:21:13,161 | INFO     | [job] validate thread has finished
[2026-05-29 19:28:14] 2026-05-29 17:21:13,224 | INFO     | [job] job monitor thread has finished
[2026-05-29 19:28:14] 2026-05-29 17:21:13,231 | INFO     | [job] create_data_payload thread has finished
[2026-05-29 19:28:14] 2026-05-29 17:21:13,248 | INFO     | [payload] validate_pre thread has finished
[2026-05-29 19:28:14] 2026-05-29 17:21:13,308 | INFO     | [data] control thread has finished
[2026-05-29 19:28:14] 2026-05-29 17:21:13,311 | INFO     | [job] control thread has finished
[2026-05-29 19:28:14] 2026-05-29 17:21:13,414 | INFO     | [data] copytool_in thread has finished
[2026-05-29 19:28:14] 2026-05-29 17:21:13,463 | INFO     | [payload] execute_payloads thread has finished
[2026-05-29 19:28:14] 2026-05-29 17:21:13,700 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-29 19:28:14] 2026-05-29 17:21:13,903 | INFO     | [payload] validate_post thread has finished
[2026-05-29 19:28:14] 2026-05-29 17:21:14,472 | INFO     | [data] copytool_out thread has finished
[2026-05-29 19:28:14] 2026-05-29 17:21:14,664 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-29 19:28:14] 2026-05-29 17:21:15,669 | INFO     | [job] queue monitor thread has finished
[2026-05-29 19:28:14] 2026-05-29 17:21:17,011 | INFO     | [data] queue_monitor thread has finished
[2026-05-29 19:28:14] 2026-05-29 17:21:22,843 | INFO     | [monitor] cgroup control has ended
[2026-05-29 19:28:14] 2026-05-29 17:21:24,846 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23383477778240)>', '<ExcThread(monitor, started 23383239829248)>']
[2026-05-29 19:28:14] 2026-05-29 17:21:29,872 | INFO     | all workflow threads have been joined
[2026-05-29 19:28:14] 2026-05-29 17:21:29,872 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-29 19:28:14] 2026-05-29 17:21:29,872 | INFO     | traces error code: 0
[2026-05-29 19:28:14] 2026-05-29 17:21:29,872 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-29 19:28:14] 2026-05-29 17:21:41,737 | INFO     | PID=585081 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-05-29 19:28:14] 2026-05-29 17:21:41,737 | INFO     | .. there are 6 such processes running
[2026-05-29 19:28:14] 2026-05-29 17:21:41,737 | INFO     | found 0 job(s) in 20 queues
[2026-05-29 19:28:14] 2026-05-29 17:21:41,737 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-29 19:28:14] 2026-05-29 17:21:41,737 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-29 19:28:14] 2026-05-29 17:21:41,737 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-29 19:28:14] 2026-05-29 17:21:41,737 | INFO     | [monitor] control thread has ended
[2026-05-29 19:28:14] 2026-05-29 17:21:41,850 [wrapper] ==== pilot stdout END ====
[2026-05-29 19:28:14] 2026-05-29 17:21:41,852 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-29 19:28:14] 2026-05-29 17:21:41,854 [wrapper] pilotpid: 585081
[2026-05-29 19:28:14] 2026-05-29 17:21:41,856 [wrapper] Pilot exit status: 0
[2026-05-29 19:28:14] 2026-05-29 17:21:41,864 [wrapper] pandaids: 7157463739
[2026-05-29 19:28:14] 2026-05-29 17:21:41,972 [wrapper] cleanup supervisor_pilot  692153 585082
[2026-05-29 19:28:14] 2026-05-29 17:21:41,974 [wrapper] Test setup, not cleaning
[2026-05-29 19:28:14] 2026-05-29 17:21:41,976 [wrapper] apfmon messages muted
[2026-05-29 19:28:14] 2026-05-29 17:21:41,978 [wrapper] ==== wrapper stdout END ====
[2026-05-29 19:28:14] 2026-05-29 17:21:41,980 [wrapper] ==== wrapper stderr END ====
[2026-05-29 19:28:14]  *** Error codes and diagnostics ***
[2026-05-29 19:28:14]     "exeErrorCode": 0,
[2026-05-29 19:28:14]     "pilotErrorCode": 0,
[2026-05-29 19:28:14]  *** Listing of results directory ***
[2026-05-29 19:28:14] total 505128
[2026-05-29 19:28:14] -rw-r--r--. 1 boinc boinc      5631 May 29 12:50 queuedata.json
[2026-05-29 19:28:14] -rw-r--r--. 1 boinc boinc    683926 May 29 12:50 pilot3.tar.gz
[2026-05-29 19:28:14] -rwx------. 1 boinc boinc     36281 May 29 12:50 runpilot2-wrapper.sh
[2026-05-29 19:28:14] -rw-r--r--. 1 boinc boinc       100 May 29 17:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-29 19:28:14] -rwxr-xr-x. 1 boinc boinc      7986 May 29 17:39 run_atlas
[2026-05-29 19:28:14] -rw-r--r--. 1 boinc boinc       105 May 29 17:39 job.xml
[2026-05-29 19:28:14] -rw-r--r--. 2 boinc boinc 293386377 May 29 18:54 EVNT.50469837._000362.pool.root.1
[2026-05-29 19:28:14] -rw-r--r--. 2 boinc boinc     15667 May 29 18:54 start_atlas.sh
[2026-05-29 19:28:14] drwxrwx--x. 2 boinc boinc      4096 May 29 18:54 shared
[2026-05-29 19:28:14] -rw-r--r--. 2 boinc boinc    697416 May 29 18:54 input.tar.gz
[2026-05-29 19:28:14] -rw-r--r--. 1 boinc boinc      6630 May 29 18:54 init_data.xml
[2026-05-29 19:28:14] -rw-r--r--. 1 boinc boinc         0 May 29 18:54 boinc_lockfile
[2026-05-29 19:28:14] -rw-r--r--. 1 boinc boinc      2513 May 29 18:54 pandaJob.out
[2026-05-29 19:28:14] -rw-------. 1 boinc boinc    995563 May 29 18:54 agis_schedconf.cvmfs.json
[2026-05-29 19:28:14] -rw-------. 1 boinc boinc   1502789 May 29 18:54 agis_ddmendpoints.agis.ALL.json
[2026-05-29 19:28:14] -rw-------. 1 boinc boinc       445 May 29 18:54 workernode_map.json
[2026-05-29 19:28:14] drwx------. 5 boinc boinc      4096 May 29 18:54 pilot3
[2026-05-29 19:28:14] -rw-------. 1 boinc boinc 218693974 May 29 19:20 HITS.50533925._009033.pool.root.1
[2026-05-29 19:28:14] -rw-r--r--. 1 boinc boinc       485 May 29 19:20 boinc_task_state.xml
[2026-05-29 19:28:14] -rw-------. 1 boinc boinc        95 May 29 19:20 pilot_heartbeat.json
[2026-05-29 19:28:14] -rw-------. 1 boinc boinc      1027 May 29 19:21 memory_monitor_summary.json
[2026-05-29 19:28:14] -rw-------. 1 boinc boinc    326715 May 29 19:21 log.50533925._009033.job.log.tgz.1
[2026-05-29 19:28:14] -rw-------. 1 boinc boinc      6373 May 29 19:21 heartbeat_new.json
[2026-05-29 19:28:14] -rw-------. 1 boinc boinc      6264 May 29 19:21 heartbeat.json
[2026-05-29 19:28:14] -rw-------. 1 boinc boinc       821 May 29 19:21 pilotlog.txt
[2026-05-29 19:28:14] -rw-------. 1 boinc boinc    197297 May 29 19:21 log.50533925._009033.job.log.1
[2026-05-29 19:28:14] -rw-------. 1 boinc boinc       357 May 29 19:21 output.list
[2026-05-29 19:28:14] -rw-r--r--. 1 boinc boinc       410 May 29 19:21 runtime_log
[2026-05-29 19:28:14] -rw-------. 1 boinc boinc    542720 May 29 19:21 result.tar.gz
[2026-05-29 19:28:14] -rw-r--r--. 1 boinc boinc      8846 May 29 19:21 runtime_log.err
[2026-05-29 19:28:14] -rw-------. 1 boinc boinc       659 May 29 19:21 6f84986f3730.diag
[2026-05-29 19:28:14] -rw-r--r--. 1 boinc boinc        25 May 29 19:28 wrapper_checkpoint.txt
[2026-05-29 19:28:14] -rw-r--r--. 1 boinc boinc      8192 May 29 19:28 boinc_mmap_file
[2026-05-29 19:28:14] -rw-r--r--. 1 boinc boinc     16413 May 29 19:28 stderr.txt
[2026-05-29 19:28:14] HITS file was successfully produced:
[2026-05-29 19:28:14] -rw-------. 1 boinc boinc 218693974 May 29 19:20 shared/HITS.pool.root.1
[2026-05-29 19:28:14]  *** Contents of shared directory: ***
[2026-05-29 19:28:14] total 501324
[2026-05-29 19:28:14] -rw-r--r--. 2 boinc boinc 293386377 May 29 18:54 ATLAS.root_0
[2026-05-29 19:28:14] -rw-r--r--. 2 boinc boinc     15667 May 29 18:54 start_atlas.sh
[2026-05-29 19:28:14] -rw-r--r--. 2 boinc boinc    697416 May 29 18:54 input.tar.gz
[2026-05-29 19:28:14] -rw-------. 1 boinc boinc 218693974 May 29 19:20 HITS.pool.root.1
[2026-05-29 19:28:14] -rw-------. 1 boinc boinc    542720 May 29 19:21 result.tar.gz
19:28:15 (580095): run_atlas exited; CPU time 16971.095531
19:28:15 (580095): called boinc_finish(0)

</stderr_txt>
]]>

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