Stderr output

<core_client_version>8.2.13</core_client_version>
<![CDATA[
<stderr_txt>
2026-05-31 01:44:38 (29304): vboxwrapper version 26210
2026-05-31 01:44:38 (29304): BOINC client version: 8.2.13
2026-05-31 01:44:38 (29304): Detected: VirtualBox VboxManage Interface (Version: 7.0.16)
2026-05-31 01:44:38 (29304): Successfully copied 'init_data.xml' to the shared directory.
2026-05-31 01:44:38 (29304): Create VM. (boinc_2984ddbdecec4e92, slot#2)
2026-05-31 01:44:39 (29304): Setting Memory Size for VM. (4800MB)
2026-05-31 01:44:39 (29304): Setting CPU Count for VM. (8)
2026-05-31 01:44:39 (29304): Setting Chipset Options for VM.
2026-05-31 01:44:39 (29304): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-05-31 01:44:39 (29304): Setting Boot Options for VM.
2026-05-31 01:44:40 (29304): Setting Network Configuration for NAT. (Driver: virtio)
2026-05-31 01:44:40 (29304): Enabling VM Network Access.
2026-05-31 01:44:40 (29304): Disabling USB Support for VM.
2026-05-31 01:44:40 (29304): Disabling COM Port Support for VM.
2026-05-31 01:44:40 (29304): Disabling LPT Port Support for VM.
2026-05-31 01:44:40 (29304): Disabling Audio Support for VM.
2026-05-31 01:44:40 (29304): Disabling Clipboard Support for VM.
2026-05-31 01:44:41 (29304): Disabling Drag and Drop Support for VM.
2026-05-31 01:44:41 (29304): Adding storage controller(s) to VM.
2026-05-31 01:44:41 (29304): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-05-31 01:44:41 (29304): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-05-31 01:44:41 (29304): forwarding host port 46023 to guest port 80
2026-05-31 01:44:41 (29304): Enabling remote desktop for VM.
2026-05-31 01:44:42 (29304): Enabling shared directory for VM.
2026-05-31 01:44:42 (29304): Starting VM using VBoxManage interface. (boinc_2984ddbdecec4e92, slot#2)
2026-05-31 01:44:43 (29304): Successfully started VM. (PID = '29694')
2026-05-31 01:44:43 (29304): Reporting VM Process ID to BOINC.
2026-05-31 01:44:43 (29304): Guest Log: BIOS: VirtualBox 7.0.16
2026-05-31 01:44:43 (29304): Guest Log: CPUID EDX: 0x178bfbff
2026-05-31 01:44:43 (29304): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-05-31 01:44:43 (29304): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-05-31 01:44:43 (29304): VM state change detected. (old = 'poweredoff', new = 'running')
2026-05-31 01:44:43 (29304): Detected: Web Application Enabled (http://localhost:46023)
2026-05-31 01:44:43 (29304): Detected: Remote Desktop Enabled (localhost:48617)
2026-05-31 01:44:43 (29304): Preference change detected
2026-05-31 01:44:43 (29304): Setting CPU throttle for VM. (100%)
2026-05-31 01:44:44 (29304): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-05-31 01:44:45 (29304): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-05-31 01:44:45 (29304): Guest Log: BIOS: Booting from Hard Disk...
2026-05-31 01:44:48 (29304): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-05-31 01:44:48 (29304): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-05-31 01:44:48 (29304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-05-31 01:44:48 (29304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-05-31 01:44:48 (29304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-05-31 01:44:48 (29304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-05-31 01:44:48 (29304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-05-31 01:44:48 (29304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-05-31 01:44:48 (29304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-05-31 01:44:48 (29304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-05-31 01:44:48 (29304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-05-31 01:44:48 (29304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-05-31 01:44:48 (29304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-05-31 01:44:48 (29304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-05-31 01:44:48 (29304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-05-31 01:44:48 (29304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-05-31 01:44:48 (29304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-05-31 01:44:48 (29304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-05-31 01:44:48 (29304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-05-31 01:44:48 (29304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-05-31 01:44:48 (29304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-05-31 01:44:48 (29304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-05-31 01:44:48 (29304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-05-31 01:44:48 (29304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-05-31 01:44:48 (29304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-05-31 01:44:48 (29304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-05-31 01:44:48 (29304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-05-31 01:44:48 (29304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-05-31 01:44:48 (29304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-05-31 01:44:48 (29304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-05-31 01:44:48 (29304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-05-31 01:44:48 (29304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-05-31 01:44:56 (29304): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-05-31 01:44:56 (29304): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-05-31 01:45:07 (29304): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-05-31 01:45:07 (29304): Guest Log: 00:00:00.000291 main     Log opened 2026-05-30T15:45:05.132437000Z
2026-05-31 01:45:07 (29304): Guest Log: 00:00:00.000512 main     OS Product: Linux
2026-05-31 01:45:07 (29304): Guest Log: 00:00:00.000587 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-05-31 01:45:07 (29304): Guest Log: 00:00:00.000646 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-05-31 01:45:07 (29304): Guest Log: 00:00:00.000702 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-05-31 01:45:07 (29304): Guest Log: 00:00:00.000704 main     Process ID: 1383
2026-05-31 01:45:07 (29304): Guest Log: 00:00:00.000705 main     Package type: LINUX_64BITS_GENERIC
2026-05-31 01:45:07 (29304): Guest Log: 00:00:00.004187 main     5.2.32 r132073 started. Verbose level = 0
2026-05-31 01:45:07 (29304): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-05-31 01:45:07 (29304): Guest Log: [INFO] Mounting shared directory
2026-05-31 01:45:07 (29304): Guest Log: [INFO] Checking for init_data.xml
2026-05-31 01:46:14 (29304): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-05-31 01:46:14 (29304): Guest Log: [INFO] Detected branch: prod
2026-05-31 01:46:14 (29304): Guest Log: This is the prod version of the ATLAS job wrapper
2026-05-31 01:46:14 (29304): Guest Log: Copying input files
2026-05-31 01:46:17 (29304): Guest Log: Copied input files into RunAtlas.
2026-05-31 01:46:17 (29304): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-05-31 01:46:17 (29304): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-05-31 01:46:17 (29304): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-05-31 01:46:17 (29304): Guest Log: Further information can be found at the LHC@home message board.
2026-05-31 01:46:26 (29304): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-05-31 01:46:26 (29304): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-05-31 01:46:26 (29304): Guest Log: 2.6.3.0 1679 0 30168 159970 4 1 3117654 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-05-31 01:46:28 (29304): Guest Log: copied the webapp to /var/www
2026-05-31 01:46:28 (29304): Guest Log: ATHENA_PROC_NUMBER=8
2026-05-31 01:46:28 (29304): Guest Log: ATHENA_CORE_NUMBER=8
2026-05-31 01:46:28 (29304): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-05-31 01:46:28 (29304): Guest Log:  *** Starting ATLAS job. (PandaID=7157462853 taskID=50533925) ***
2026-05-31 03:23:44 (29304): Status Report: Elapsed Time: '6000.000000'
2026-05-31 03:23:44 (29304): Status Report: CPU Time: '41534.020000'
2026-05-31 05:02:45 (29304): Status Report: Elapsed Time: '12000.000000'
2026-05-31 05:02:45 (29304): Status Report: CPU Time: '88307.590000'
2026-05-31 06:14:19 (29304): Guest Log:  *** Job finished ***
2026-05-31 06:14:19 (29304): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-05-31 06:14:19 (29304): Guest Log: 2026-05-30 20:14:05,417 | INFO     | all workflow threads have been joined
2026-05-31 06:14:19 (29304): Guest Log: 2026-05-30 20:14:05,418 | INFO     | end of generic workflow (traces error code: 0)
2026-05-31 06:14:19 (29304): Guest Log: 2026-05-30 20:14:05,418 | INFO     | traces error code: 0
2026-05-31 06:14:19 (29304): Guest Log: 2026-05-30 20:14:05,418 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-05-31 06:14:19 (29304): Guest Log: 2026-05-30 20:14:16,539 | INFO     | PID=6113 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-05-31 06:14:19 (29304): Guest Log: 2026-05-30 20:14:16,540 | INFO     | found 0 job(s) in 20 queues
2026-05-31 06:14:19 (29304): Guest Log: 2026-05-30 20:14:16,540 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-05-31 06:14:19 (29304): Guest Log: 2026-05-30 20:14:16,540 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-05-31 06:14:19 (29304): Guest Log: 2026-05-30 20:14:16,540 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-05-31 06:14:19 (29304): Guest Log: 2026-05-30 20:14:16,541 | INFO     | [monitor] control thread has ended
2026-05-31 06:14:19 (29304): Guest Log: 2026-05-30 20:14:16,710 [wrapper] ==== pilot stdout END ====
2026-05-31 06:14:19 (29304): Guest Log: 2026-05-30 20:14:16,720 [wrapper] ==== wrapper stdout RESUME ====
2026-05-31 06:14:19 (29304): Guest Log: 2026-05-30 20:14:16,729 [wrapper] pilotpid: 6113
2026-05-31 06:14:19 (29304): Guest Log: 2026-05-30 20:14:16,739 [wrapper] Pilot exit status: 0
2026-05-31 06:14:19 (29304): Guest Log: 2026-05-30 20:14:16,828 [wrapper] pandaids: 7157462853
2026-05-31 06:14:19 (29304): Guest Log: 2026-05-30 20:14:16,892 [wrapper] cleanup supervisor_pilot 29353 6114
2026-05-31 06:14:19 (29304): Guest Log: 2026-05-30 20:14:16,911 [wrapper] Test setup, not cleaning
2026-05-31 06:14:19 (29304): Guest Log: 2026-05-30 20:14:16,921 [wrapper] apfmon messages muted
2026-05-31 06:14:19 (29304): Guest Log: 2026-05-30 20:14:16,930 [wrapper] ==== wrapper stdout END ====
2026-05-31 06:14:19 (29304): Guest Log: 2026-05-30 20:14:16,940 [wrapper] ==== wrapper stderr END ====
2026-05-31 06:14:19 (29304): Guest Log:  *** Error codes and diagnostics ***
2026-05-31 06:14:19 (29304): Guest Log:     "exeErrorCode": 0,
2026-05-31 06:14:19 (29304): Guest Log:     "pilotErrorCode": 0,
2026-05-31 06:14:19 (29304): Guest Log:  *** Listing of results directory ***
2026-05-31 06:14:19 (29304): Guest Log: total 229804
2026-05-31 06:14:19 (29304): Guest Log: -rw-r--r--. 1 atlas atlas      5631 May 29 10:50 queuedata.json
2026-05-31 06:14:19 (29304): Guest Log: -rw-r--r--. 1 atlas atlas    683926 May 29 10:50 pilot3.tar.gz
2026-05-31 06:14:19 (29304): Guest Log: -rwx------. 1 atlas atlas     36281 May 29 10:50 runpilot2-wrapper.sh
2026-05-31 06:14:19 (29304): Guest Log: -rw-r--r--. 1 atlas atlas      8584 May 30 15:46 init_data.xml
2026-05-31 06:14:19 (29304): Guest Log: -rw-r--r--. 1 atlas atlas    697416 May 30 15:46 input.tar.gz
2026-05-31 06:14:19 (29304): Guest Log: -rw-r--r--. 1 atlas atlas     15667 May 30 15:46 start_atlas.sh
2026-05-31 06:14:19 (29304): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 30 15:46 EVNT.50469837._000335.pool.root.1 -> /data/./ATLAS.root_0
2026-05-31 06:14:19 (29304): Guest Log: -rw-r--r--. 1 atlas atlas      2513 May 30 15:46 pandaJob.out
2026-05-31 06:14:19 (29304): Guest Log: -rw-------. 1 atlas atlas    995585 May 30 15:47 agis_schedconf.cvmfs.json
2026-05-31 06:14:19 (29304): Guest Log: -rw-------. 1 atlas atlas       435 May 30 15:47 workernode_map.json
2026-05-31 06:14:19 (29304): Guest Log: drwx------. 5 atlas atlas      4096 May 30 15:47 pilot3
2026-05-31 06:14:19 (29304): Guest Log: -rw-------. 1 atlas atlas 227597972 May 30 20:12 HITS.50533925._008366.pool.root.1
2026-05-31 06:14:19 (29304): Guest Log: -rw-------. 1 atlas atlas      1041 May 30 20:13 memory_monitor_summary.json
2026-05-31 06:14:19 (29304): Guest Log: -rw-------. 1 atlas atlas        95 May 30 20:13 pilot_heartbeat.json
2026-05-31 06:14:19 (29304): Guest Log: -rw-------. 1 atlas atlas   1502789 May 30 20:13 agis_ddmendpoints.agis.ALL.json
2026-05-31 06:14:19 (29304): Guest Log: -rw-------. 1 atlas atlas    411437 May 30 20:13 log.50533925._008366.job.log.tgz.1
2026-05-31 06:14:19 (29304): Guest Log: -rw-------. 1 atlas atlas      6428 May 30 20:13 heartbeat_new.json
2026-05-31 06:14:19 (29304): Guest Log: -rw-------. 1 atlas atlas      6319 May 30 20:13 heartbeat.json
2026-05-31 06:14:19 (29304): Guest Log: -rw-------. 1 atlas atlas       744 May 30 20:14 pilotlog.txt
2026-05-31 06:14:19 (29304): Guest Log: -rw-------. 1 atlas atlas   1422351 May 30 20:14 log.50533925._008366.job.log.1
2026-05-31 06:14:19 (29304): Guest Log: -rw-------. 1 atlas atlas       357 May 30 20:14 output.list
2026-05-31 06:14:19 (29304): Guest Log: -rw-r--r--. 1 atlas atlas       410 May 30 20:14 runtime_log
2026-05-31 06:14:19 (29304): Guest Log: -rw-------. 1 atlas atlas   1853440 May 30 20:14 result.tar.gz
2026-05-31 06:14:19 (29304): Guest Log: -rw-r--r--. 1 atlas atlas      8420 May 30 20:14 runtime_log.err
2026-05-31 06:14:19 (29304): Guest Log: -rw-------. 1 atlas atlas       675 May 30 20:14 6f6e27845c0d.diag
2026-05-31 06:14:19 (29304): Guest Log: Looking for outputfile HITS.50533925._008366.pool.root.1
2026-05-31 06:14:19 (29304): Guest Log: HITS file was successfully produced
2026-05-31 06:14:19 (29304): Guest Log: -rw-------. 1 atlas atlas 227597972 May 30 20:12 /home/atlas/RunAtlas/HITS.50533925._008366.pool.root.1
2026-05-31 06:14:19 (29304): Guest Log: Successfully finished the ATLAS job!
2026-05-31 06:14:19 (29304): Guest Log: Copying the results back to the shared directory!
2026-05-31 06:14:19 (29304): Guest Log:  *** Contents of shared directory: ***
2026-05-31 06:14:19 (29304): Guest Log: total 291212
2026-05-31 06:14:19 (29304): Guest Log: -rw-r--r--. 1 root root 295609734 May 30 15:44 ATLAS.root_0
2026-05-31 06:14:19 (29304): Guest Log: -rw-r--r--. 1 root root      8584 May 30 15:44 init_data.xml
2026-05-31 06:14:19 (29304): Guest Log: -rw-r--r--. 1 root root    697416 May 30 15:44 input.tar.gz
2026-05-31 06:14:19 (29304): Guest Log: -rw-r--r--. 1 root root   1853440 May 30 20:14 result.tar.gz
2026-05-31 06:14:19 (29304): Guest Log: -rw-r--r--. 1 root root     15667 May 30 15:44 start_atlas.sh
2026-05-31 06:14:19 (29304): Guest Log:  *** Success! Shutting down the machine. ***
2026-05-31 06:14:19 (29304): VM Completion File Detected.
2026-05-31 06:14:19 (29304): Powering off VM.
2026-05-31 06:14:19 (29304): Successfully stopped VM.
2026-05-31 06:14:19 (29304): Deregistering VM. (boinc_2984ddbdecec4e92, slot#2)
2026-05-31 06:14:19 (29304): Removing network bandwidth throttle group from VM.
2026-05-31 06:14:20 (29304): Removing VM from VirtualBox.
2026-05-31 06:14:25 (29304): called boinc_finish(0)

</stderr_txt>
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