Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:45:42 (1523850): wrapper (7.7.26015): starting
12:45:42 (1523850): wrapper: running run_atlas (--nthreads 4)
[2026-05-29 12:45:42] Arguments: --nthreads 4
[2026-05-29 12:45:42] Threads: 4
[2026-05-29 12:45:42] Checking for CVMFS
[2026-05-29 12:45:42] No cvmfs_config command found, will try listing directly
[2026-05-29 12:45:42] CVMFS is ok
[2026-05-29 12:45:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-29 12:45:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-29 12:45:42] Further information can be found at the LHC@home message board.
[2026-05-29 12:45:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-29 12:45:42] Checking for apptainer binary...
[2026-05-29 12:45:42] which: no apptainer in ((null))
[2026-05-29 12:45:42] apptainer is not installed, using version from CVMFS
[2026-05-29 12:45:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-29 12:45:42] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot60/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2026-05-29 12:45:42] apptainer works
[2026-05-29 12:45:42] Set ATHENA_PROC_NUMBER=4
[2026-05-29 12:45:42] Set ATHENA_CORE_NUMBER=4
[2026-05-29 12:45:42] Starting ATLAS job with PandaID=7157308692
[2026-05-29 12:45:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot60/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-29 14:53:43]  *** The last 200 lines of the pilot log: ***
[2026-05-29 14:53:43] 2026-05-29 12:51:32,197 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot60/slots/2/workernode_map.json
[2026-05-29 14:53:43] 2026-05-29 12:51:32,198 | INFO     | this job has now completed (state=finished)
[2026-05-29 14:53:43] 2026-05-29 12:51:32,198 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-29 14:53:43] 2026-05-29 12:51:32,198 | INFO     | log transfer has been attempted: DONE
[2026-05-29 14:53:43] 2026-05-29 12:51:32,198 | INFO     | job 7157308692 has finished - writing final server update
[2026-05-29 14:53:43] 2026-05-29 12:51:32,199 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2069553/.job.ad'
[2026-05-29 14:53:43] 2026-05-29 12:51:32,199 | INFO     | total number of processed events: 400 (read)
[2026-05-29 14:53:43] 2026-05-29 12:51:32,226 | INFO     | using path: /var/lib/boinc/var/slot60/slots/2/PanDA_Pilot-7157308692/memory_monitor_summary.json (trf name=prmon)
[2026-05-29 14:53:43] 2026-05-29 12:51:32,226 | INFO     | extracted standard info from prmon json
[2026-05-29 14:53:43] 2026-05-29 12:51:32,226 | INFO     | extracted standard memory fields from prmon json
[2026-05-29 14:53:43] 2026-05-29 12:51:32,227 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-29 14:53:43] 2026-05-29 12:51:32,227 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-29 14:53:43] 2026-05-29 12:51:32,230 | INFO     | fitting pss+swap vs Time
[2026-05-29 14:53:43] 2026-05-29 12:51:32,230 | INFO     | sum of square deviations: 576985702.0
[2026-05-29 14:53:43] 2026-05-29 12:51:32,230 | INFO     | sum of deviations: 10806651968.999998
[2026-05-29 14:53:43] 2026-05-29 12:51:32,231 | INFO     | mean x (centered): 0.0
[2026-05-29 14:53:43] 2026-05-29 12:51:32,231 | INFO     | mean y: 2327854.8211382115
[2026-05-29 14:53:43] 2026-05-29 12:51:32,231 | INFO     | intersect: 2327854.8211382115
[2026-05-29 14:53:43] 2026-05-29 12:51:32,231 | INFO     | chi2: 1.1883236230087983
[2026-05-29 14:53:43] 2026-05-29 12:51:32,231 | INFO     | sum of square deviations: 509440249.5
[2026-05-29 14:53:43] 2026-05-29 12:51:32,232 | INFO     | sum of deviations: 10408351981.0
[2026-05-29 14:53:43] 2026-05-29 12:51:32,232 | INFO     | mean x (centered): 0.0
[2026-05-29 14:53:43] 2026-05-29 12:51:32,232 | INFO     | mean y: 2326955.0508474577
[2026-05-29 14:53:43] 2026-05-29 12:51:32,232 | INFO     | intersect: 2326955.0508474577
[2026-05-29 14:53:43] 2026-05-29 12:51:32,233 | INFO     | chi2: 1.1899625309122568
[2026-05-29 14:53:43] 2026-05-29 12:51:32,233 | INFO     | current chi2=1.1899625309122568 (change=-0.13791764059261719 %)
[2026-05-29 14:53:43] 2026-05-29 12:51:32,233 | INFO     | right removable region: 117
[2026-05-29 14:53:43] 2026-05-29 12:51:32,233 | INFO     | sum of square deviations: 509440249.5
[2026-05-29 14:53:43] 2026-05-29 12:51:32,233 | INFO     | sum of deviations: -2622856436.5000005
[2026-05-29 14:53:43] 2026-05-29 12:51:32,234 | INFO     | mean x (centered): 0.0
[2026-05-29 14:53:43] 2026-05-29 12:51:32,234 | INFO     | mean y: 2357449.906779661
[2026-05-29 14:53:43] 2026-05-29 12:51:32,234 | INFO     | intersect: 2357449.906779661
[2026-05-29 14:53:43] 2026-05-29 12:51:32,234 | INFO     | chi2: 0.004553579993448381
[2026-05-29 14:53:43] 2026-05-29 12:51:32,234 | INFO     | current chi2=0.004553579993448381 (change=99.61680640649733 %)
[2026-05-29 14:53:43] 2026-05-29 12:51:32,234 | INFO     | sum of square deviations: 447383272.0
[2026-05-29 14:53:43] 2026-05-29 12:51:32,235 | INFO     | sum of deviations: -2455767158.0
[2026-05-29 14:53:43] 2026-05-29 12:51:32,235 | INFO     | mean x (centered): 0.0
[2026-05-29 14:53:43] 2026-05-29 12:51:32,235 | INFO     | mean y: 2357028.3805309734
[2026-05-29 14:53:43] 2026-05-29 12:51:32,235 | INFO     | intersect: 2357028.3805309734
[2026-05-29 14:53:43] 2026-05-29 12:51:32,235 | INFO     | chi2: 0.004382381756752438
[2026-05-29 14:53:43] 2026-05-29 12:51:32,235 | INFO     | current chi2=0.004382381756752438 (change=3.7596404794087412 %)
[2026-05-29 14:53:43] 2026-05-29 12:51:32,235 | INFO     | left removable region: 10
[2026-05-29 14:53:43] 2026-05-29 12:51:32,236 | INFO     | sum of square deviations: 379832238.0
[2026-05-29 14:53:43] 2026-05-29 12:51:32,236 | INFO     | sum of deviations: -2291999787.0000005
[2026-05-29 14:53:43] 2026-05-29 12:51:32,236 | INFO     | mean x (centered): 0.0
[2026-05-29 14:53:43] 2026-05-29 12:51:32,236 | INFO     | mean y: 2357472.3925233646
[2026-05-29 14:53:43] 2026-05-29 12:51:32,236 | INFO     | intersect: 2357472.3925233646
[2026-05-29 14:53:43] 2026-05-29 12:51:32,237 | INFO     | chi2: 0.004248215787623758
[2026-05-29 14:53:43] 2026-05-29 12:51:32,237 | INFO     | current memory leak: -6.03 B/s (using 107 data points, chi2=0.00)
[2026-05-29 14:53:43] 2026-05-29 12:51:32,237 | INFO     | could have reported an average CPU frequency of 2768 MHz (8 samples)
[2026-05-29 14:53:43] 2026-05-29 12:51:32,238 | INFO     | ..............................
[2026-05-29 14:53:43] 2026-05-29 12:51:32,238 | INFO     | . Timing measurements:
[2026-05-29 14:53:43] 2026-05-29 12:51:32,238 | INFO     | . get job = 0 s
[2026-05-29 14:53:43] 2026-05-29 12:51:32,238 | INFO     | . initial setup = 8 s
[2026-05-29 14:53:43] 2026-05-29 12:51:32,238 | INFO     | . payload setup = 13 s
[2026-05-29 14:53:43] 2026-05-29 12:51:32,238 | INFO     | . stage-in = 0 s
[2026-05-29 14:53:43] 2026-05-29 12:51:32,238 | INFO     | . payload execution = 7496 s
[2026-05-29 14:53:43] 2026-05-29 12:51:32,238 | INFO     | . stage-out = 0 s
[2026-05-29 14:53:43] 2026-05-29 12:51:32,238 | INFO     | . log creation = 0 s
[2026-05-29 14:53:43] 2026-05-29 12:51:32,239 | INFO     | ..............................
[2026-05-29 14:53:43] 2026-05-29 12:51:32,330 | INFO     | 
[2026-05-29 14:53:43] 2026-05-29 12:51:32,331 | INFO     | job summary report
[2026-05-29 14:53:43] 2026-05-29 12:51:32,331 | INFO     | --------------------------------------------------
[2026-05-29 14:53:43] 2026-05-29 12:51:32,331 | INFO     | PanDA job id: 7157308692
[2026-05-29 14:53:43] 2026-05-29 12:51:32,331 | INFO     | task id: 49545102
[2026-05-29 14:53:43] 2026-05-29 12:51:32,331 | INFO     | errors: (none)
[2026-05-29 14:53:43] 2026-05-29 12:51:32,331 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-29 14:53:43] 2026-05-29 12:51:32,331 | INFO     | pilot state: finished 
[2026-05-29 14:53:43] 2026-05-29 12:51:32,331 | INFO     | transexitcode: 0
[2026-05-29 14:53:43] 2026-05-29 12:51:32,331 | INFO     | exeerrorcode: 0
[2026-05-29 14:53:43] 2026-05-29 12:51:32,331 | INFO     | exeerrordiag: 
[2026-05-29 14:53:43] 2026-05-29 12:51:32,332 | INFO     | exitcode: 0
[2026-05-29 14:53:43] 2026-05-29 12:51:32,332 | INFO     | exitmsg: OK
[2026-05-29 14:53:43] 2026-05-29 12:51:32,332 | INFO     | cpuconsumptiontime: 28754 s
[2026-05-29 14:53:43] 2026-05-29 12:51:32,332 | INFO     | nevents: 400
[2026-05-29 14:53:43] 2026-05-29 12:51:32,332 | INFO     | neventsw: 0
[2026-05-29 14:53:43] 2026-05-29 12:51:32,332 | INFO     | pid: 1536142
[2026-05-29 14:53:43] 2026-05-29 12:51:32,332 | INFO     | pgrp: 1536142
[2026-05-29 14:53:43] 2026-05-29 12:51:32,332 | INFO     | corecount: 4
[2026-05-29 14:53:43] 2026-05-29 12:51:32,332 | INFO     | event service: False
[2026-05-29 14:53:43] 2026-05-29 12:51:32,332 | INFO     | sizes: {0: 2266021, 1: 2267679, 11: 2267679, 7513: 2295509, 7514: 2304585, 7516: 2304723}
[2026-05-29 14:53:43] 2026-05-29 12:51:32,332 | INFO     | --------------------------------------------------
[2026-05-29 14:53:43] 2026-05-29 12:51:32,332 | INFO     | 
[2026-05-29 14:53:43] 2026-05-29 12:51:32,333 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot60/slots/2
[2026-05-29 14:53:43] 2026-05-29 12:51:32,363 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-29 14:53:43] 2026-05-29 12:51:32,363 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-29 14:53:43] 2026-05-29 12:51:32,363 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-29 14:53:43] 2026-05-29 12:51:32,363 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-29 14:53:43] 2026-05-29 12:51:32,363 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-29 14:53:43] 2026-05-29 12:51:32,363 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-29 14:53:43] 2026-05-29 12:51:32,363 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-29 14:53:43] 2026-05-29 12:51:32,364 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-29 14:53:43] 2026-05-29 12:51:32,364 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-29 14:53:43] 2026-05-29 12:51:32,364 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-29 14:53:43] 2026-05-29 12:51:32,364 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-29 14:53:43] 2026-05-29 12:51:32,364 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-29 14:53:43] 2026-05-29 12:51:32,364 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-29 14:53:43] 2026-05-29 12:51:32,364 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-29 14:53:43] 2026-05-29 12:51:32,364 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-29 14:53:43] 2026-05-29 12:51:32,364 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-29 14:53:43] 2026-05-29 12:51:32,364 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-29 14:53:43] 2026-05-29 12:51:32,364 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-29 14:53:43] 2026-05-29 12:51:32,364 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-29 14:53:43] 2026-05-29 12:51:32,364 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-29 14:53:43] 2026-05-29 12:51:32,365 | INFO     | job 7157308692 has completed (purged errors)
[2026-05-29 14:53:43] 2026-05-29 12:51:32,365 | INFO     | overall cleanup function is called
[2026-05-29 14:53:43] 2026-05-29 12:51:33,373 | INFO     | --- collectZombieJob: --- 10, [1536142]
[2026-05-29 14:53:43] 2026-05-29 12:51:33,373 | INFO     | zombie collector waiting for pid 1536142
[2026-05-29 14:53:43] 2026-05-29 12:51:33,373 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-29 14:53:43] 2026-05-29 12:51:33,373 | INFO     | collected zombie processes
[2026-05-29 14:53:43] 2026-05-29 12:51:33,374 | INFO     | will attempt to kill all subprocesses of pid=1536142
[2026-05-29 14:53:43] 2026-05-29 12:51:33,933 | INFO     | process IDs to be killed: [1536142] (in reverse order)
[2026-05-29 14:53:43] 2026-05-29 12:51:34,248 | WARNING  | found no corresponding commands to process id(s)
[2026-05-29 14:53:43] 2026-05-29 12:51:34,248 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-29 14:53:43] 2026-05-29 12:51:34,281 | INFO     | did not find any defunct processes belonging to 1536142
[2026-05-29 14:53:43] 2026-05-29 12:51:34,312 | INFO     | did not find any defunct processes belonging to 1536142
[2026-05-29 14:53:43] 2026-05-29 12:51:34,313 | INFO     | Ready for new job
[2026-05-29 14:53:43] 2026-05-29 12:51:34,315 | INFO     | ***************************************
[2026-05-29 14:53:43] 2026-05-29 12:51:34,315 | INFO     | ***  PanDA Pilot version 3.13.1.30  ***
[2026-05-29 14:53:43] 2026-05-29 12:51:34,315 | INFO     | ***************************************
[2026-05-29 14:53:43] 2026-05-29 12:51:34,315 | INFO     | 
[2026-05-29 14:53:43] 2026-05-29 12:51:34,323 | INFO     | architecture information:
[2026-05-29 14:53:43] 2026-05-29 12:51:34,323 | INFO     | executing command: cat /etc/os-release
[2026-05-29 14:53:43] 2026-05-29 12:51:34,349 | INFO     | cat /etc/os-release:
[2026-05-29 14:53:43] NAME="CentOS Linux"
[2026-05-29 14:53:43] VERSION="7 (Core)"
[2026-05-29 14:53:43] ID="centos"
[2026-05-29 14:53:43] ID_LIKE="rhel fedora"
[2026-05-29 14:53:43] VERSION_ID="7"
[2026-05-29 14:53:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-29 14:53:43] ANSI_COLOR="0;31"
[2026-05-29 14:53:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-29 14:53:43] HOME_URL="https://www.centos.org/"
[2026-05-29 14:53:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-29 14:53:43] 
[2026-05-29 14:53:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-29 14:53:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-29 14:53:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-29 14:53:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-29 14:53:43] 
[2026-05-29 14:53:43] 2026-05-29 12:51:34,350 | INFO     | ***************************************
[2026-05-29 14:53:43] 2026-05-29 12:51:34,853 | INFO     | executing command: df -mP /var/lib/boinc/var/slot60/slots/2
[2026-05-29 14:53:43] 2026-05-29 12:51:34,880 | INFO     | sufficient remaining disk space (311343185920 B)
[2026-05-29 14:53:43] 2026-05-29 12:51:34,880 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-29 14:53:43] 2026-05-29 12:51:34,880 | INFO     | current server update state: UPDATING_FINAL
[2026-05-29 14:53:43] 2026-05-29 12:51:34,880 | INFO     | update_server=False
[2026-05-29 14:53:43] 2026-05-29 12:51:34,880 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-29 14:53:43] 2026-05-29 12:51:35,098 | INFO     | all data control threads have been joined
[2026-05-29 14:53:43] 2026-05-29 12:51:35,302 | INFO     | all payload control threads have been joined
[2026-05-29 14:53:43] 2026-05-29 12:51:35,515 | INFO     | job.realtimelogging is not enabled
[2026-05-29 14:53:43] 2026-05-29 12:51:35,737 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-29 14:53:43] 2026-05-29 12:51:35,800 | WARNING  | process 1536142 can no longer be monitored (due to stat problems) - aborting
[2026-05-29 14:53:43] 2026-05-29 12:51:35,886 | INFO     | [job] retrieve thread has finished
[2026-05-29 14:53:43] 2026-05-29 12:51:36,103 | INFO     | [data] control thread has finished
[2026-05-29 14:53:43] 2026-05-29 12:51:36,143 | INFO     | [job] validate thread has finished
[2026-05-29 14:53:43] 2026-05-29 12:51:36,194 | INFO     | [payload] execute_payloads thread has finished
[2026-05-29 14:53:43] 2026-05-29 12:51:36,210 | INFO     | all job control threads have been joined
[2026-05-29 14:53:43] 2026-05-29 12:51:36,310 | INFO     | [payload] control thread has finished
[2026-05-29 14:53:43] 2026-05-29 12:51:36,334 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-29 14:53:43] 2026-05-29 12:51:36,405 | INFO     | using path: /var/lib/boinc/var/slot60/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-05-29 14:53:43] 2026-05-29 12:51:36,411 | INFO     | [job] create_data_payload thread has finished
[2026-05-29 14:53:43] 2026-05-29 12:51:36,520 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-29 14:53:43] 2026-05-29 12:51:36,633 | INFO     | [payload] validate_pre thread has finished
[2026-05-29 14:53:43] 2026-05-29 12:51:36,686 | INFO     | [payload] validate_post thread has finished
[2026-05-29 14:53:43] 2026-05-29 12:51:36,761 | INFO     | [payload] failed_post thread has finished
[2026-05-29 14:53:43] 2026-05-29 12:51:37,015 | INFO     | [data] copytool_in thread has finished
[2026-05-29 14:53:43] 2026-05-29 12:51:37,078 | INFO     | number of running child processes to parent process 1536142: 1
[2026-05-29 14:53:43] 2026-05-29 12:51:37,078 | INFO     | maximum number of monitored processes: 6
[2026-05-29 14:53:43] 2026-05-29 12:51:37,079 | INFO     | aborting job monitoring since job object (job id=7157308692) has expired
[2026-05-29 14:53:43] 2026-05-29 12:51:37,079 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-29 14:53:43] 2026-05-29 12:51:37,079 | INFO     | will abort loop
[2026-05-29 14:53:43] 2026-05-29 12:51:37,216 | INFO     | [job] control thread has finished
[2026-05-29 14:53:43] 2026-05-29 12:51:37,341 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-29 14:53:43] 2026-05-29 12:51:37,744 | INFO     | [data] copytool_out thread has finished
[2026-05-29 14:53:43] 2026-05-29 12:51:38,081 | INFO     | [job] job monitor thread has finished
[2026-05-29 14:53:43] 2026-05-29 12:51:38,346 | INFO     | [job] queue monitor thread has finished
[2026-05-29 14:53:43] 2026-05-29 12:51:40,340 | INFO     | [data] queue_monitor thread has finished
[2026-05-29 14:53:43] 2026-05-29 12:52:05,330 | INFO     | PID=1528211 has CPU usage=11.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-05-29 14:53:43] 2026-05-29 12:52:05,330 | INFO     | .. there are 18 such processes running
[2026-05-29 14:53:43] 2026-05-29 12:52:05,332 | INFO     | found 0 job(s) in 20 queues
[2026-05-29 14:53:43] 2026-05-29 12:52:05,332 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-29 14:53:43] 2026-05-29 12:52:05,332 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-29 14:53:43] 2026-05-29 12:52:16,404 | INFO     | [monitor] cgroup control has ended
[2026-05-29 14:53:43] 2026-05-29 12:52:17,104 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22382983731008)>', '<ExcThread(monitor, started 22382676784896)>']
[2026-05-29 14:53:43] 2026-05-29 12:52:17,392 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-29 14:53:43] 2026-05-29 12:52:17,392 | INFO     | [monitor] control thread has ended
[2026-05-29 14:53:43] 2026-05-29 12:52:22,129 | INFO     | all workflow threads have been joined
[2026-05-29 14:53:43] 2026-05-29 12:52:22,129 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-29 14:53:43] 2026-05-29 12:52:22,130 | INFO     | traces error code: 0
[2026-05-29 14:53:43] 2026-05-29 12:52:22,130 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-29 14:53:43] 2026-05-29 12:52:22,313 [wrapper] ==== pilot stdout END ====
[2026-05-29 14:53:43] 2026-05-29 12:52:22,317 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-29 14:53:43] 2026-05-29 12:52:22,321 [wrapper] pilotpid: 1528211
[2026-05-29 14:53:43] 2026-05-29 12:52:22,325 [wrapper] Pilot exit status: 0
[2026-05-29 14:53:43] 2026-05-29 12:52:22,343 [wrapper] pandaids: 7157308692
[2026-05-29 14:53:43] 2026-05-29 12:52:22,556 [wrapper] cleanup supervisor_pilot 1859092 1528212
[2026-05-29 14:53:43] 2026-05-29 12:52:22,560 [wrapper] Test setup, not cleaning
[2026-05-29 14:53:43] 2026-05-29 12:52:22,565 [wrapper] apfmon messages muted
[2026-05-29 14:53:43] 2026-05-29 12:52:22,570 [wrapper] ==== wrapper stdout END ====
[2026-05-29 14:53:43] 2026-05-29 12:52:22,574 [wrapper] ==== wrapper stderr END ====
[2026-05-29 14:53:43]  *** Error codes and diagnostics ***
[2026-05-29 14:53:43]     "exeErrorCode": 0,
[2026-05-29 14:53:43]     "pilotErrorCode": 0,
[2026-05-29 14:53:43]  *** Listing of results directory ***
[2026-05-29 14:53:43] total 430608
[2026-05-29 14:53:43] -rw-r--r--. 1 boinc boinc    709501 May 28 18:36 pilot3.tar.gz
[2026-05-29 14:53:43] -rw-r--r--. 1 boinc boinc      5631 May 28 18:54 queuedata.json
[2026-05-29 14:53:43] -rwx------. 1 boinc boinc     36281 May 28 18:55 runpilot2-wrapper.sh
[2026-05-29 14:53:43] -rw-r--r--. 1 boinc boinc       100 May 29 11:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-29 14:53:43] -rwxr-xr-x. 1 boinc boinc      7986 May 29 11:45 run_atlas
[2026-05-29 14:53:43] -rw-r--r--. 1 boinc boinc       105 May 29 11:45 job.xml
[2026-05-29 14:53:43] -rw-r--r--. 2 boinc boinc 269376496 May 29 12:45 EVNT.49539563._000794.pool.root.1
[2026-05-29 14:53:43] -rw-r--r--. 1 boinc boinc      6540 May 29 12:45 init_data.xml
[2026-05-29 14:53:43] -rw-r--r--. 2 boinc boinc    722756 May 29 12:45 input.tar.gz
[2026-05-29 14:53:43] -rw-r--r--. 2 boinc boinc     15667 May 29 12:45 start_atlas.sh
[2026-05-29 14:53:43] drwxrwx--x. 2 boinc boinc      4096 May 29 12:45 shared
[2026-05-29 14:53:43] -rw-r--r--. 1 boinc boinc         0 May 29 12:45 boinc_lockfile
[2026-05-29 14:53:43] -rw-r--r--. 1 boinc boinc      2569 May 29 12:45 pandaJob.out
[2026-05-29 14:53:43] -rw-------. 1 boinc boinc    995529 May 29 12:45 agis_schedconf.cvmfs.json
[2026-05-29 14:53:43] -rw-------. 1 boinc boinc         0 May 29 12:45 agis_ddmendpoints.agis.ALL.json
[2026-05-29 14:53:43] -rw-------. 1 boinc boinc   1251485 May 29 12:45 cric_ddmendpoints.json
[2026-05-29 14:53:43] -rw-------. 1 boinc boinc       439 May 29 12:46 workernode_map.json
[2026-05-29 14:53:43] drwx------. 5 boinc boinc      4096 May 29 12:46 pilot3
[2026-05-29 14:53:43] -rw-------. 1 boinc boinc 165664724 May 29 14:50 HITS.49545102._017076.pool.root.1
[2026-05-29 14:53:43] -rw-r--r--. 1 boinc boinc       486 May 29 14:51 boinc_task_state.xml
[2026-05-29 14:53:43] -rw-------. 1 boinc boinc      1028 May 29 14:51 memory_monitor_summary.json
[2026-05-29 14:53:43] -rw-------. 1 boinc boinc    266652 May 29 14:51 log.49545102._017076.job.log.tgz.1
[2026-05-29 14:53:43] -rw-------. 1 boinc boinc      6411 May 29 14:51 heartbeat_new.json
[2026-05-29 14:53:43] -rw-------. 1 boinc boinc      6302 May 29 14:51 heartbeat.json
[2026-05-29 14:53:43] -rw-------. 1 boinc boinc        95 May 29 14:52 pilot_heartbeat.json
[2026-05-29 14:53:43] -rw-------. 1 boinc boinc      5438 May 29 14:52 pilotlog.txt
[2026-05-29 14:53:43] -rw-------. 1 boinc boinc    720866 May 29 14:52 log.49545102._017076.job.log.1
[2026-05-29 14:53:43] -rw-------. 1 boinc boinc       357 May 29 14:52 output.list
[2026-05-29 14:53:43] -rw-r--r--. 1 boinc boinc       410 May 29 14:52 runtime_log
[2026-05-29 14:53:43] -rw-------. 1 boinc boinc   1003520 May 29 14:52 result.tar.gz
[2026-05-29 14:53:43] -rw-r--r--. 1 boinc boinc      8827 May 29 14:52 runtime_log.err
[2026-05-29 14:53:43] -rw-------. 1 boinc boinc       662 May 29 14:52 73991ed7d330.diag
[2026-05-29 14:53:43] -rw-r--r--. 1 boinc boinc        26 May 29 14:53 wrapper_checkpoint.txt
[2026-05-29 14:53:43] -rw-r--r--. 1 boinc boinc      8192 May 29 14:53 boinc_mmap_file
[2026-05-29 14:53:43] -rw-r--r--. 1 boinc boinc     21056 May 29 14:53 stderr.txt
[2026-05-29 14:53:43] HITS file was successfully produced:
[2026-05-29 14:53:43] -rw-------. 1 boinc boinc 165664724 May 29 14:50 shared/HITS.pool.root.1
[2026-05-29 14:53:43]  *** Contents of shared directory: ***
[2026-05-29 14:53:43] total 426560
[2026-05-29 14:53:43] -rw-r--r--. 2 boinc boinc 269376496 May 29 12:45 ATLAS.root_0
[2026-05-29 14:53:43] -rw-r--r--. 2 boinc boinc    722756 May 29 12:45 input.tar.gz
[2026-05-29 14:53:43] -rw-r--r--. 2 boinc boinc     15667 May 29 12:45 start_atlas.sh
[2026-05-29 14:53:43] -rw-------. 1 boinc boinc 165664724 May 29 14:50 HITS.pool.root.1
[2026-05-29 14:53:43] -rw-------. 1 boinc boinc   1003520 May 29 14:52 result.tar.gz
14:53:44 (1523850): run_atlas exited; CPU time 29206.717392
14:53:44 (1523850): called boinc_finish(0)

</stderr_txt>
]]>

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