Stderr output

<core_client_version>8.2.13</core_client_version>
<![CDATA[
<stderr_txt>
2026-05-29 15:04:47 (6004): vboxwrapper version 26210
2026-05-29 15:04:47 (6004): BOINC client version: 8.2.13
2026-05-29 15:04:47 (6004): Detected: VirtualBox VboxManage Interface (Version: 7.2.8)
2026-05-29 15:04:47 (6004): Successfully copied 'init_data.xml' to the shared directory.
2026-05-29 15:04:47 (6004): Create VM. (boinc_acbcd72a2f175c01, slot#3)
2026-05-29 15:04:47 (6004): Setting Memory Size for VM. (4800MB)
2026-05-29 15:04:47 (6004): Setting CPU Count for VM. (8)
2026-05-29 15:04:47 (6004): Setting Chipset Options for VM.
2026-05-29 15:04:47 (6004): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-05-29 15:04:47 (6004): Setting Boot Options for VM.
2026-05-29 15:04:48 (6004): Setting Network Configuration for NAT. (Driver: virtio)
2026-05-29 15:04:48 (6004): Enabling VM Network Access.
2026-05-29 15:04:48 (6004): Disabling USB Support for VM.
2026-05-29 15:04:48 (6004): Disabling COM Port Support for VM.
2026-05-29 15:04:48 (6004): Disabling LPT Port Support for VM.
2026-05-29 15:04:48 (6004): Disabling Audio Support for VM.
2026-05-29 15:04:48 (6004): Disabling Clipboard Support for VM.
2026-05-29 15:04:48 (6004): Disabling Drag and Drop Support for VM.
2026-05-29 15:04:48 (6004): Adding storage controller(s) to VM.
2026-05-29 15:04:48 (6004): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-05-29 15:04:48 (6004): Adding VirtualBox Guest Additions to VM.
2026-05-29 15:04:48 (6004): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-05-29 15:04:48 (6004): forwarding host port 44441 to guest port 80
2026-05-29 15:04:49 (6004): Enabling remote desktop for VM.
2026-05-29 15:04:49 (6004): Required extension pack not installed, remote desktop not enabled.
2026-05-29 15:04:49 (6004): Enabling shared directory for VM.
2026-05-29 15:04:49 (6004): Starting VM using VBoxManage interface. (boinc_acbcd72a2f175c01, slot#3)
2026-05-29 15:04:50 (6004): Successfully started VM. (PID = '6495')
2026-05-29 15:04:50 (6004): Reporting VM Process ID to BOINC.
2026-05-29 15:04:50 (6004): Guest Log: BIOS: VirtualBox 7.2.8
2026-05-29 15:04:50 (6004): Guest Log: CPUID EDX: 0x178bfbff
2026-05-29 15:04:50 (6004): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-05-29 15:04:50 (6004): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-05-29 15:04:50 (6004): VM state change detected. (old = 'poweredoff', new = 'running')
2026-05-29 15:04:50 (6004): Detected: Web Application Enabled (http://localhost:44441)
2026-05-29 15:04:50 (6004): Preference change detected
2026-05-29 15:04:50 (6004): Setting CPU throttle for VM. (100%)
2026-05-29 15:04:50 (6004): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-05-29 15:04:52 (6004): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-05-29 15:04:52 (6004): Guest Log: BIOS: Booting from Hard Disk...
2026-05-29 15:04:55 (6004): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-05-29 15:04:55 (6004): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-05-29 15:04:55 (6004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-05-29 15:04:55 (6004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-05-29 15:04:55 (6004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-05-29 15:04:55 (6004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-05-29 15:04:55 (6004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-05-29 15:04:55 (6004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-05-29 15:04:55 (6004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-05-29 15:04:55 (6004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-05-29 15:04:55 (6004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-05-29 15:04:55 (6004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-05-29 15:04:55 (6004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-05-29 15:04:55 (6004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-05-29 15:04:55 (6004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-05-29 15:04:55 (6004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-05-29 15:04:55 (6004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-05-29 15:04:55 (6004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-05-29 15:04:55 (6004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-05-29 15:04:55 (6004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-05-29 15:04:55 (6004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-05-29 15:04:55 (6004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-05-29 15:04:55 (6004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-05-29 15:04:55 (6004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-05-29 15:04:55 (6004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-05-29 15:04:55 (6004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-05-29 15:04:55 (6004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-05-29 15:04:55 (6004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-05-29 15:04:55 (6004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-05-29 15:04:55 (6004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-05-29 15:04:55 (6004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-05-29 15:04:55 (6004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-05-29 15:05:01 (6004): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-05-29 15:05:01 (6004): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-05-29 15:05:07 (6004): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-05-29 15:05:07 (6004): Guest Log: 00:00:00.000168 main     Log opened 2026-05-29T13:05:04.723946000Z
2026-05-29 15:05:07 (6004): Guest Log: 00:00:00.000282 main     OS Product: Linux
2026-05-29 15:05:07 (6004): Guest Log: 00:00:00.000309 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-05-29 15:05:07 (6004): Guest Log: 00:00:00.000335 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-05-29 15:05:07 (6004): Guest Log: 00:00:00.000356 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-05-29 15:05:07 (6004): Guest Log: 00:00:00.000356 main     Process ID: 1371
2026-05-29 15:05:07 (6004): Guest Log: 00:00:00.000357 main     Package type: LINUX_64BITS_GENERIC
2026-05-29 15:05:07 (6004): Guest Log: 00:00:00.002442 main     5.2.32 r132073 started. Verbose level = 0
2026-05-29 15:05:07 (6004): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-05-29 15:05:07 (6004): Guest Log: [INFO] Mounting shared directory
2026-05-29 15:05:07 (6004): Guest Log: [INFO] Checking for init_data.xml
2026-05-29 15:05:16 (6004): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-05-29 15:05:16 (6004): Guest Log: [INFO] Detected branch: prod
2026-05-29 15:05:17 (6004): Guest Log: This is the prod version of the ATLAS job wrapper
2026-05-29 15:05:17 (6004): Guest Log: Copying input files
2026-05-29 15:05:18 (6004): Guest Log: Copied input files into RunAtlas.
2026-05-29 15:05:18 (6004): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-05-29 15:05:18 (6004): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-05-29 15:05:18 (6004): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-05-29 15:05:18 (6004): Guest Log: Further information can be found at the LHC@home message board.
2026-05-29 15:05:25 (6004): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-05-29 15:05:26 (6004): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-05-29 15:05:26 (6004): Guest Log: 2.6.3.0 1651 0 32196 159932 4 1 3117654 4096001 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-05-29 15:05:26 (6004): Guest Log: copied the webapp to /var/www
2026-05-29 15:05:26 (6004): Guest Log: ATHENA_PROC_NUMBER=8
2026-05-29 15:05:26 (6004): Guest Log: ATHENA_CORE_NUMBER=8
2026-05-29 15:05:26 (6004): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-05-29 15:05:26 (6004): Guest Log:  *** Starting ATLAS job. (PandaID=7157461405 taskID=50533925) ***
2026-05-29 16:05:47 (6004): VM state change detected. (old = 'running', new = 'paused')
2026-05-29 17:29:25 (6004): VM state change detected. (old = 'paused', new = 'running')
2026-05-29 17:29:30 (6004): Guest Log: 01:00:44.381779 timesync vgsvcTimeSyncWorker: Radical host time change: 5 027 009 000 000ns (HostNow=1 780 068 551 990 000 000 ns HostLast=1 780 063 524 981 000 000 ns)
2026-05-29 17:29:40 (6004): Guest Log: 01:00:54.382794 timesync vgsvcTimeSyncWorker: Radical guest time change: 5 012 909 335 000ns (GuestNow=1 780 068 562 002 935 000 ns GuestLast=1 780 063 549 093 600 000 ns fSetTimeLastLoop=true )
2026-05-29 18:07:29 (6004): Status Report: Elapsed Time: '6000.000000'
2026-05-29 18:07:29 (6004): Status Report: CPU Time: '40511.400000'
2026-05-29 18:24:04 (6004): Guest Log:  *** Job finished ***
2026-05-29 18:24:04 (6004): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-05-29 18:24:04 (6004): Guest Log: 2026-05-29 16:23:30,606 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-05-29 18:24:04 (6004): Guest Log: 2026-05-29 16:23:30,606 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-05-29 18:24:04 (6004): Guest Log: 2026-05-29 16:23:37,237 | INFO     | [monitor] cgroup control has ended
2026-05-29 18:24:04 (6004): Guest Log: 2026-05-29 16:23:39,444 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140455492380480)>', '<ExcThread(monitor, started 140454523811584)>']
2026-05-29 18:24:04 (6004): Guest Log: 2026-05-29 16:23:40,205 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-05-29 18:24:04 (6004): Guest Log: 2026-05-29 16:23:40,205 | INFO     | [monitor] control thread has ended
2026-05-29 18:24:04 (6004): Guest Log: 2026-05-29 16:23:44,462 | INFO     | all workflow threads have been joined
2026-05-29 18:24:04 (6004): Guest Log: 2026-05-29 16:23:44,462 | INFO     | end of generic workflow (traces error code: 0)
2026-05-29 18:24:04 (6004): Guest Log: 2026-05-29 16:23:44,462 | INFO     | traces error code: 0
2026-05-29 18:24:04 (6004): Guest Log: 2026-05-29 16:23:44,462 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-05-29 18:24:04 (6004): Guest Log: 2026-05-29 16:23:44,550 [wrapper] ==== pilot stdout END ====
2026-05-29 18:24:04 (6004): Guest Log: 2026-05-29 16:23:44,556 [wrapper] ==== wrapper stdout RESUME ====
2026-05-29 18:24:04 (6004): Guest Log: 2026-05-29 16:23:44,561 [wrapper] pilotpid: 6095
2026-05-29 18:24:04 (6004): Guest Log: 2026-05-29 16:23:44,566 [wrapper] Pilot exit status: 0
2026-05-29 18:24:04 (6004): Guest Log: 2026-05-29 16:23:44,691 [wrapper] pandaids: 7157461405
2026-05-29 18:24:04 (6004): Guest Log: 2026-05-29 16:23:44,727 [wrapper] cleanup supervisor_pilot 26384 6096
2026-05-29 18:24:04 (6004): Guest Log: 2026-05-29 16:23:44,738 [wrapper] Test setup, not cleaning
2026-05-29 18:24:04 (6004): Guest Log: 2026-05-29 16:23:44,744 [wrapper] apfmon messages muted
2026-05-29 18:24:04 (6004): Guest Log: 2026-05-29 16:23:44,750 [wrapper] ==== wrapper stdout END ====
2026-05-29 18:24:04 (6004): Guest Log: 2026-05-29 16:23:44,757 [wrapper] ==== wrapper stderr END ====
2026-05-29 18:24:04 (6004): Guest Log:  *** Error codes and diagnostics ***
2026-05-29 18:24:04 (6004): Guest Log:     "exeErrorCode": 0,
2026-05-29 18:24:04 (6004): Guest Log:     "pilotErrorCode": 0,
2026-05-29 18:24:04 (6004): Guest Log:  *** Listing of results directory ***
2026-05-29 18:24:04 (6004): Guest Log: total 220520
2026-05-29 18:24:04 (6004): Guest Log: -rw-r--r--. 1 atlas atlas      5631 May 29 07:51 queuedata.json
2026-05-29 18:24:04 (6004): Guest Log: -rw-r--r--. 1 atlas atlas    709501 May 29 07:51 pilot3.tar.gz
2026-05-29 18:24:04 (6004): Guest Log: -rwx------. 1 atlas atlas     36281 May 29 07:51 runpilot2-wrapper.sh
2026-05-29 18:24:04 (6004): Guest Log: -rw-r--r--. 1 atlas atlas     15667 May 29 13:05 start_atlas.sh
2026-05-29 18:24:04 (6004): Guest Log: -rw-r--r--. 1 atlas atlas    722736 May 29 13:05 input.tar.gz
2026-05-29 18:24:04 (6004): Guest Log: -rw-r--r--. 1 atlas atlas      8818 May 29 13:05 init_data.xml
2026-05-29 18:24:04 (6004): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 29 13:05 EVNT.50469837._000292.pool.root.1 -> /data/./ATLAS.root_0
2026-05-29 18:24:04 (6004): Guest Log: -rw-r--r--. 1 atlas atlas      2512 May 29 13:05 pandaJob.out
2026-05-29 18:24:04 (6004): Guest Log: -rw-------. 1 atlas atlas    995529 May 29 13:07 agis_schedconf.cvmfs.json
2026-05-29 18:24:04 (6004): Guest Log: -rw-------. 1 atlas atlas   1251485 May 29 13:07 cric_ddmendpoints.json
2026-05-29 18:24:04 (6004): Guest Log: -rw-------. 1 atlas atlas       433 May 29 13:07 workernode_map.json
2026-05-29 18:24:04 (6004): Guest Log: drwx------. 5 atlas atlas      4096 May 29 13:08 pilot3
2026-05-29 18:24:04 (6004): Guest Log: -rw-------. 1 atlas atlas 220069715 May 29 16:22 HITS.50533925._007279.pool.root.1
2026-05-29 18:24:04 (6004): Guest Log: -rw-------. 1 atlas atlas        97 May 29 16:22 pilot_heartbeat.json
2026-05-29 18:24:04 (6004): Guest Log: -rw-------. 1 atlas atlas      1040 May 29 16:22 memory_monitor_summary.json
2026-05-29 18:24:04 (6004): Guest Log: -rw-------. 1 atlas atlas         0 May 29 16:22 agis_ddmendpoints.agis.ALL.json
2026-05-29 18:24:04 (6004): Guest Log: -rw-------. 1 atlas atlas    311395 May 29 16:22 log.50533925._007279.job.log.tgz.1
2026-05-29 18:24:04 (6004): Guest Log: -rw-------. 1 atlas atlas      6419 May 29 16:22 heartbeat_new.json
2026-05-29 18:24:04 (6004): Guest Log: -rw-------. 1 atlas atlas      6310 May 29 16:22 heartbeat.json
2026-05-29 18:24:04 (6004): Guest Log: -rw-------. 1 atlas atlas      4876 May 29 16:23 pilotlog.txt
2026-05-29 18:24:04 (6004): Guest Log: -rw-------. 1 atlas atlas    629107 May 29 16:23 log.50533925._007279.job.log.1
2026-05-29 18:24:04 (6004): Guest Log: -rw-------. 1 atlas atlas       357 May 29 16:23 output.list
2026-05-29 18:24:04 (6004): Guest Log: -rw-r--r--. 1 atlas atlas       410 May 29 16:23 runtime_log
2026-05-29 18:24:04 (6004): Guest Log: -rw-------. 1 atlas atlas    962560 May 29 16:23 result.tar.gz
2026-05-29 18:24:04 (6004): Guest Log: -rw-r--r--. 1 atlas atlas      8375 May 29 16:23 runtime_log.err
2026-05-29 18:24:04 (6004): Guest Log: -rw-------. 1 atlas atlas       656 May 29 16:23 458ea1f92134.diag
2026-05-29 18:24:04 (6004): Guest Log: Looking for outputfile HITS.50533925._007279.pool.root.1
2026-05-29 18:24:04 (6004): Guest Log: HITS file was successfully produced
2026-05-29 18:24:04 (6004): Guest Log: -rw-------. 1 atlas atlas 220069715 May 29 16:22 /home/atlas/RunAtlas/HITS.50533925._007279.pool.root.1
2026-05-29 18:24:04 (6004): Guest Log: Successfully finished the ATLAS job!
2026-05-29 18:24:04 (6004): Guest Log: Copying the results back to the shared directory!
2026-05-29 18:24:04 (6004): Guest Log:  *** Contents of shared directory: ***
2026-05-29 18:24:04 (6004): Guest Log: total 288208
2026-05-29 18:24:04 (6004): Guest Log: -rw-r--r--. 1 root root 293407277 May 29 13:04 ATLAS.root_0
2026-05-29 18:24:04 (6004): Guest Log: -rw-r--r--. 1 root root      8818 May 29 13:04 init_data.xml
2026-05-29 18:24:04 (6004): Guest Log: -rw-r--r--. 1 root root    722736 May 29 13:04 input.tar.gz
2026-05-29 18:24:04 (6004): Guest Log: -rw-r--r--. 1 root root    962560 May 29  2026 result.tar.gz
2026-05-29 18:24:04 (6004): Guest Log: -rw-r--r--. 1 root root     15667 May 29 13:04 start_atlas.sh
2026-05-29 18:24:04 (6004): Guest Log:  *** Success! Shutting down the machine. ***
2026-05-29 18:24:04 (6004): VM Completion File Detected.
2026-05-29 18:24:04 (6004): Powering off VM.
2026-05-29 18:24:05 (6004): Successfully stopped VM.
2026-05-29 18:24:05 (6004): Deregistering VM. (boinc_acbcd72a2f175c01, slot#3)
2026-05-29 18:24:05 (6004): Removing network bandwidth throttle group from VM.
2026-05-29 18:24:05 (6004): Removing VM from VirtualBox.
2026-05-29 18:24:10 (6004): called boinc_finish(0)

</stderr_txt>
]]>

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