Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
2026-05-29 21:35:33 (7944): vboxwrapper version 26210
2026-05-29 21:35:33 (7944): BOINC client version: 7.16.11
2026-05-29 21:35:34 (7944): Detected: VirtualBox VboxManage Interface (Version: 6.1.12)
2026-05-29 21:35:34 (7944): Successfully copied 'init_data.xml' to the shared directory.
2026-05-29 21:35:34 (7944): Create VM. (boinc_6fb4ad57b5e9de5c, slot#1)
2026-05-29 21:35:35 (7944): Setting Memory Size for VM. (4300MB)
2026-05-29 21:35:35 (7944): Setting CPU Count for VM. (3)
2026-05-29 21:35:35 (7944): Setting Chipset Options for VM.
2026-05-29 21:35:36 (7944): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-05-29 21:35:36 (7944): Setting Boot Options for VM.
2026-05-29 21:35:37 (7944): Setting Network Configuration for NAT. (Driver: virtio)
2026-05-29 21:35:37 (7944): Enabling VM Network Access.
2026-05-29 21:35:37 (7944): Disabling USB Support for VM.
2026-05-29 21:35:37 (7944): Disabling COM Port Support for VM.
2026-05-29 21:35:38 (7944): Disabling LPT Port Support for VM.
2026-05-29 21:35:38 (7944): Disabling Audio Support for VM.
2026-05-29 21:35:38 (7944): Disabling Clipboard Support for VM.
2026-05-29 21:35:38 (7944): Disabling Drag and Drop Support for VM.
2026-05-29 21:35:39 (7944): Adding storage controller(s) to VM.
2026-05-29 21:35:39 (7944): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-05-29 21:35:40 (7944): Adding VirtualBox Guest Additions to VM.
2026-05-29 21:35:40 (7944): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-05-29 21:35:41 (7944): forwarding host port 50368 to guest port 80
2026-05-29 21:35:41 (7944): Enabling remote desktop for VM.
2026-05-29 21:35:41 (7944): Required extension pack not installed, remote desktop not enabled.
2026-05-29 21:35:41 (7944): Enabling shared directory for VM.
2026-05-29 21:35:42 (7944): Starting VM using VBoxManage interface. (boinc_6fb4ad57b5e9de5c, slot#1)
2026-05-29 21:35:45 (7944): Successfully started VM. (PID = '6064')
2026-05-29 21:35:45 (7944): Reporting VM Process ID to BOINC.
2026-05-29 21:35:45 (7944): Guest Log: BIOS: VirtualBox 6.1.12
2026-05-29 21:35:45 (7944): Guest Log: CPUID EDX: 0x178bfbff
2026-05-29 21:35:45 (7944): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-05-29 21:35:45 (7944): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-05-29 21:35:45 (7944): VM state change detected. (old = 'poweredoff', new = 'running')
2026-05-29 21:35:45 (7944): Detected: Web Application Enabled (http://localhost:50368)
2026-05-29 21:35:45 (7944): Preference change detected
2026-05-29 21:35:45 (7944): Setting CPU throttle for VM. (100%)
2026-05-29 21:35:45 (7944): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2026-05-29 21:35:47 (7944): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-05-29 21:35:47 (7944): Guest Log: BIOS: Booting from Hard Disk...
2026-05-29 21:35:50 (7944): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-05-29 21:35:50 (7944): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-05-29 21:35:50 (7944): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-05-29 21:35:50 (7944): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-05-29 21:35:50 (7944): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-05-29 21:35:50 (7944): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-05-29 21:35:50 (7944): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-05-29 21:35:50 (7944): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-05-29 21:35:50 (7944): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-05-29 21:35:50 (7944): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-05-29 21:35:50 (7944): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-05-29 21:35:50 (7944): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-05-29 21:35:50 (7944): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-05-29 21:35:50 (7944): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-05-29 21:35:50 (7944): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-05-29 21:35:50 (7944): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-05-29 21:35:50 (7944): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-05-29 21:35:50 (7944): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-05-29 21:35:50 (7944): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-05-29 21:35:50 (7944): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-05-29 21:35:50 (7944): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-05-29 21:35:50 (7944): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-05-29 21:35:50 (7944): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-05-29 21:35:50 (7944): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-05-29 21:35:50 (7944): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-05-29 21:35:50 (7944): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-05-29 21:35:50 (7944): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-05-29 21:35:50 (7944): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-05-29 21:35:50 (7944): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-05-29 21:35:50 (7944): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-05-29 21:35:50 (7944): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-05-29 21:35:50 (7944): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-05-29 21:35:55 (7944): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-05-29 21:35:55 (7944): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-05-29 21:36:00 (7944): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-05-29 21:36:00 (7944): Guest Log: 00:00:00.000751 main     Log opened 2026-05-29T21:35:58.855259000Z
2026-05-29 21:36:00 (7944): Guest Log: 00:00:00.000948 main     OS Product: Linux
2026-05-29 21:36:00 (7944): Guest Log: 00:00:00.000993 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-05-29 21:36:00 (7944): Guest Log: 00:00:00.001026 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-05-29 21:36:00 (7944): Guest Log: 00:00:00.001091 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-05-29 21:36:00 (7944): Guest Log: 00:00:00.001092 main     Process ID: 1290
2026-05-29 21:36:00 (7944): Guest Log: 00:00:00.001092 main     Package type: LINUX_64BITS_GENERIC
2026-05-29 21:36:00 (7944): Guest Log: 00:00:00.001918 main     5.2.32 r132073 started. Verbose level = 0
2026-05-29 21:36:00 (7944): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-05-29 21:36:00 (7944): Guest Log: [INFO] Mounting shared directory
2026-05-29 21:36:00 (7944): Guest Log: [INFO] Checking for init_data.xml
2026-05-29 21:36:03 (7944): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-05-29 21:36:03 (7944): Guest Log: [INFO] Detected branch: prod
2026-05-29 21:36:03 (7944): Guest Log: This is the prod version of the ATLAS job wrapper
2026-05-29 21:36:03 (7944): Guest Log: Copying input files
2026-05-29 21:36:04 (7944): Guest Log: Copied input files into RunAtlas.
2026-05-29 21:36:04 (7944): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-05-29 21:36:04 (7944): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-05-29 21:36:04 (7944): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-05-29 21:36:04 (7944): Guest Log: Further information can be found at the LHC@home message board.
2026-05-29 21:36:10 (7944): Guest Log: 00:00:10.164310 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 190 077 536 000ns (GuestNow=1 780 083 368 781 135 000 ns GuestLast=1 780 090 558 858 671 000 ns fSetTimeLastLoop=true )
2026-05-29 21:36:12 (7944): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-05-29 21:36:12 (7944): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-05-29 21:36:12 (7944): Guest Log: 2.6.3.0 1566 0 32168 159942 4 1 3117654 4096001 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-05-29 21:36:13 (7944): Guest Log: copied the webapp to /var/www
2026-05-29 21:36:13 (7944): Guest Log: ATHENA_PROC_NUMBER=3
2026-05-29 21:36:13 (7944): Guest Log: ATHENA_CORE_NUMBER=3
2026-05-29 21:36:13 (7944): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-05-29 21:36:13 (7944): Guest Log:  *** Starting ATLAS job. (PandaID=7157457263 taskID=49545102) ***
2026-05-29 23:16:27 (7944): Status Report: Elapsed Time: '6000.000000'
2026-05-29 23:16:27 (7944): Status Report: CPU Time: '17159.812500'
2026-05-30 00:42:02 (7944): Guest Log:  *** Job finished ***
2026-05-30 00:42:02 (7944): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-05-30 00:42:02 (7944): Guest Log: 2026-05-29 22:41:49,853 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-05-30 00:42:02 (7944): Guest Log: 2026-05-29 22:41:49,853 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-05-30 00:42:02 (7944): Guest Log: 2026-05-29 22:41:50,080 | INFO     | [monitor] cgroup control has ended
2026-05-30 00:42:02 (7944): Guest Log: 2026-05-29 22:41:50,783 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140191460722496)>', '<ExcThread(monitor, started 140190769190656)>']
2026-05-30 00:42:02 (7944): Guest Log: 2026-05-29 22:41:50,903 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-05-30 00:42:02 (7944): Guest Log: 2026-05-29 22:41:50,903 | INFO     | [monitor] control thread has ended
2026-05-30 00:42:02 (7944): Guest Log: 2026-05-29 22:41:55,789 | INFO     | all workflow threads have been joined
2026-05-30 00:42:02 (7944): Guest Log: 2026-05-29 22:41:55,789 | INFO     | end of generic workflow (traces error code: 0)
2026-05-30 00:42:02 (7944): Guest Log: 2026-05-29 22:41:55,789 | INFO     | traces error code: 0
2026-05-30 00:42:02 (7944): Guest Log: 2026-05-29 22:41:55,790 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-05-30 00:42:02 (7944): Guest Log: 2026-05-29 22:41:55,911 [wrapper] ==== pilot stdout END ====
2026-05-30 00:42:02 (7944): Guest Log: 2026-05-29 22:41:55,917 [wrapper] ==== wrapper stdout RESUME ====
2026-05-30 00:42:02 (7944): Guest Log: 2026-05-29 22:41:55,922 [wrapper] pilotpid: 5952
2026-05-30 00:42:02 (7944): Guest Log: 2026-05-29 22:41:55,927 [wrapper] Pilot exit status: 0
2026-05-30 00:42:02 (7944): Guest Log: 2026-05-29 22:41:56,031 [wrapper] pandaids: 7157457263
2026-05-30 00:42:02 (7944): Guest Log: 2026-05-29 22:41:56,062 [wrapper] cleanup supervisor_pilot 27238 5953
2026-05-30 00:42:02 (7944): Guest Log: 2026-05-29 22:41:56,067 [wrapper] Test setup, not cleaning
2026-05-30 00:42:02 (7944): Guest Log: 2026-05-29 22:41:56,072 [wrapper] apfmon messages muted
2026-05-30 00:42:02 (7944): Guest Log: 2026-05-29 22:41:56,077 [wrapper] ==== wrapper stdout END ====
2026-05-30 00:42:02 (7944): Guest Log: 2026-05-29 22:41:56,082 [wrapper] ==== wrapper stderr END ====
2026-05-30 00:42:02 (7944): Guest Log:  *** Error codes and diagnostics ***
2026-05-30 00:42:02 (7944): Guest Log:     "exeErrorCode": 0,
2026-05-30 00:42:02 (7944): Guest Log:     "pilotErrorCode": 0,
2026-05-30 00:42:02 (7944): Guest Log:  *** Listing of results directory ***
2026-05-30 00:42:02 (7944): Guest Log: total 176268
2026-05-30 00:42:02 (7944): Guest Log: -rw-r--r--. 1 atlas atlas      5631 May 29 05:10 queuedata.json
2026-05-30 00:42:02 (7944): Guest Log: -rw-r--r--. 1 atlas atlas    709501 May 29 05:10 pilot3.tar.gz
2026-05-30 00:42:02 (7944): Guest Log: -rwx------. 1 atlas atlas     36281 May 29 05:10 runpilot2-wrapper.sh
2026-05-30 00:42:02 (7944): Guest Log: -rwxr-xr-x. 1 atlas atlas      8755 May 29 19:36 init_data.xml
2026-05-30 00:42:02 (7944): Guest Log: -rwxr-xr-x. 1 atlas atlas    722754 May 29 19:36 input.tar.gz
2026-05-30 00:42:02 (7944): Guest Log: -rwxr-xr-x. 1 atlas atlas     15667 May 29 19:36 start_atlas.sh
2026-05-30 00:42:02 (7944): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 29 19:36 EVNT.49539563._000856.pool.root.1 -> /data/./ATLAS.root_0
2026-05-30 00:42:02 (7944): Guest Log: -rw-r--r--. 1 atlas atlas      2569 May 29 19:36 pandaJob.out
2026-05-30 00:42:02 (7944): Guest Log: -rw-------. 1 atlas atlas    995587 May 29 19:37 agis_schedconf.cvmfs.json
2026-05-30 00:42:02 (7944): Guest Log: -rw-------. 1 atlas atlas   1251485 May 29 19:37 cric_ddmendpoints.json
2026-05-30 00:42:02 (7944): Guest Log: -rw-------. 1 atlas atlas       424 May 29 19:37 workernode_map.json
2026-05-30 00:42:02 (7944): Guest Log: drwx------. 5 atlas atlas      4096 May 29 19:37 pilot3
2026-05-30 00:42:02 (7944): Guest Log: -rw-------. 1 atlas atlas 174023214 May 29 22:40 HITS.49545102._020562.pool.root.1
2026-05-30 00:42:02 (7944): Guest Log: -rw-------. 1 atlas atlas      1042 May 29 22:41 memory_monitor_summary.json
2026-05-30 00:42:02 (7944): Guest Log: -rw-------. 1 atlas atlas         0 May 29 22:41 agis_ddmendpoints.agis.ALL.json
2026-05-30 00:42:02 (7944): Guest Log: -rw-------. 1 atlas atlas    281500 May 29 22:41 log.49545102._020562.job.log.tgz.1
2026-05-30 00:42:02 (7944): Guest Log: -rw-------. 1 atlas atlas      6432 May 29 22:41 heartbeat_new.json
2026-05-30 00:42:02 (7944): Guest Log: -rw-------. 1 atlas atlas      6323 May 29 22:41 heartbeat.json
2026-05-30 00:42:02 (7944): Guest Log: -rw-------. 1 atlas atlas        95 May 29 22:41 pilot_heartbeat.json
2026-05-30 00:42:02 (7944): Guest Log: -rw-------. 1 atlas atlas      4804 May 29 22:41 pilotlog.txt
2026-05-30 00:42:02 (7944): Guest Log: -rw-------. 1 atlas atlas   1026375 May 29 22:41 log.49545102._020562.job.log.1
2026-05-30 00:42:02 (7944): Guest Log: -rw-------. 1 atlas atlas       357 May 29 22:41 output.list
2026-05-30 00:42:02 (7944): Guest Log: -rw-r--r--. 1 atlas atlas       410 May 29 22:41 runtime_log
2026-05-30 00:42:02 (7944): Guest Log: -rw-------. 1 atlas atlas   1320960 May 29 22:41 result.tar.gz
2026-05-30 00:42:02 (7944): Guest Log: -rw-r--r--. 1 atlas atlas      8369 May 29 22:41 runtime_log.err
2026-05-30 00:42:02 (7944): Guest Log: -rw-------. 1 atlas atlas       654 May 29 22:41 1fcd5b7311d3.diag
2026-05-30 00:42:02 (7944): Guest Log: Looking for outputfile HITS.49545102._020562.pool.root.1
2026-05-30 00:42:02 (7944): Guest Log: HITS file was successfully produced
2026-05-30 00:42:02 (7944): Guest Log: -rw-------. 1 atlas atlas 174023214 May 29 22:40 /home/atlas/RunAtlas/HITS.49545102._020562.pool.root.1
2026-05-30 00:42:03 (7944): Guest Log: Successfully finished the ATLAS job!
2026-05-30 00:42:03 (7944): Guest Log: Copying the results back to the shared directory!
2026-05-30 00:42:03 (7944): Guest Log:  *** Contents of shared directory: ***
2026-05-30 00:42:03 (7944): Guest Log: total 429948
2026-05-30 00:42:03 (7944): Guest Log: -rwxrwxrwx. 1 root root 264160628 May 29 19:35 ATLAS.root_0
2026-05-30 00:42:03 (7944): Guest Log: -rwxrwxrwx. 1 root root 174023214 May 29  2026 HITS.pool.root.1
2026-05-30 00:42:03 (7944): Guest Log: -rwxrwxrwx. 1 root root      8755 May 29 19:35 init_data.xml
2026-05-30 00:42:03 (7944): Guest Log: -rwxrwxrwx. 1 root root    722754 May 29 09:42 input.tar.gz
2026-05-30 00:42:03 (7944): Guest Log: -rwxrwxrwx. 1 root root   1320960 May 29  2026 result.tar.gz
2026-05-30 00:42:03 (7944): Guest Log: -rwxrwxrwx. 1 root root     15667 May 29 09:42 start_atlas.sh
2026-05-30 00:42:03 (7944): Guest Log:  *** Success! Shutting down the machine. ***
2026-05-30 00:42:03 (7944): VM Completion File Detected.
2026-05-30 00:42:03 (7944): Powering off VM.
2026-05-30 00:42:04 (7944): Successfully stopped VM.
2026-05-30 00:42:04 (7944): Deregistering VM. (boinc_6fb4ad57b5e9de5c, slot#1)
2026-05-30 00:42:04 (7944): Removing network bandwidth throttle group from VM.
2026-05-30 00:42:04 (7944): Removing VM from VirtualBox.
2026-05-30 00:42:10 (7944): called boinc_finish(0)

</stderr_txt>
]]>

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