Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:02:52 (2340785): wrapper (7.7.26015): starting
07:02:52 (2340785): wrapper: running run_atlas (--nthreads 12)
[2026-05-29 07:02:52] Arguments: --nthreads 12
[2026-05-29 07:02:52] Threads: 12
[2026-05-29 07:02:52] Checking for CVMFS
[2026-05-29 07:02:52] No cvmfs_config command found, will try listing directly
[2026-05-29 07:02:52] CVMFS is ok
[2026-05-29 07:02:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-29 07:02:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-29 07:02:52] Further information can be found at the LHC@home message board.
[2026-05-29 07:02:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-29 07:02:52] Checking for apptainer binary...
[2026-05-29 07:02:52] which: no apptainer in ((null))
[2026-05-29 07:02:52] apptainer is not installed, using version from CVMFS
[2026-05-29 07:02:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-29 07:02:52] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot156/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-05-29 07:02:52] apptainer works
[2026-05-29 07:02:52] Set ATHENA_PROC_NUMBER=12
[2026-05-29 07:02:52] Set ATHENA_CORE_NUMBER=12
[2026-05-29 07:02:52] Starting ATLAS job with PandaID=7157449929
[2026-05-29 07:02:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot156/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-29 07:28:07]  *** The last 200 lines of the pilot log: ***
[2026-05-29 07:28:07]  filesize=322824
[2026-05-29 07:28:07]  filetype=log
[2026-05-29 07:28:07]  guid=81d34656-0987-400a-8874-990b17de01f0
[2026-05-29 07:28:07]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-05-29 07:28:07]  is_altstaged=None
[2026-05-29 07:28:07]  is_tar=False
[2026-05-29 07:28:07]  lfn=log.50533925._001581.job.log.tgz.1
[2026-05-29 07:28:07]  mtime=0
[2026-05-29 07:28:07]  protocol_id=None
[2026-05-29 07:28:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-05-29 07:28:07]  replicas=None
[2026-05-29 07:28:07]  scope=mc23_13p6TeV
[2026-05-29 07:28:07]  status=None
[2026-05-29 07:28:07]  status_code=0
[2026-05-29 07:28:07]  storage_token=
[2026-05-29 07:28:07]  surl=/var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7157449929/log.50533925._001581.job.log.tgz.1
[2026-05-29 07:28:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c6/60/log.50533925._001581.job.log.tgz.1
[2026-05-29 07:28:07]  workdir=None
[2026-05-29 07:28:07] ]
[2026-05-29 07:28:07] 2026-05-29 05:27:13,673 | INFO     | transferring file log.50533925._001581.job.log.tgz.1 from /var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7157449929/log.50533925._001581.job.log.tgz.1 to /var/lib/
[2026-05-29 07:28:07] 2026-05-29 05:27:13,674 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7157449929/log.50533925._001581.job.log.tgz.1 /var/lib/boinc/var/slot156/slots/1/
[2026-05-29 07:28:07] 2026-05-29 05:27:13,686 | INFO     | adding to output.list: log.50533925._001581.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c6/60/log.50533925._001581.job.log.tg
[2026-05-29 07:28:07] 2026-05-29 05:27:13,686 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-05-29 07:28:07] 2026-05-29 05:27:13,686 | INFO     | summary of transferred files:
[2026-05-29 07:28:07] 2026-05-29 05:27:13,686 | INFO     |  -- lfn=log.50533925._001581.job.log.tgz.1, status_code=0, status=transferred
[2026-05-29 07:28:07] 2026-05-29 05:27:13,686 | INFO     | stage-out finished correctly
[2026-05-29 07:28:07] 2026-05-29 05:27:17,070 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-29 07:28:07] 2026-05-29 05:27:17,095 | INFO     | job 7157449929 has state=finished
[2026-05-29 07:28:07] 2026-05-29 05:27:17,095 | INFO     | preparing for final server update for job 7157449929 in state='finished'
[2026-05-29 07:28:07] 2026-05-29 05:27:17,095 | INFO     | reading metadata from: /var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7157449929/jobReport.json
[2026-05-29 07:28:07] 2026-05-29 05:27:17,097 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot156/slots/1/workernode_map.json
[2026-05-29 07:28:07] 2026-05-29 05:27:17,097 | INFO     | this job has now completed (state=finished)
[2026-05-29 07:28:07] 2026-05-29 05:27:17,097 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-29 07:28:07] 2026-05-29 05:27:17,097 | INFO     | log transfer has been attempted: DONE
[2026-05-29 07:28:07] 2026-05-29 05:27:17,097 | INFO     | job 7157449929 has finished - writing final server update
[2026-05-29 07:28:07] 2026-05-29 05:27:17,097 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1676477/.job.ad'
[2026-05-29 07:28:07] 2026-05-29 05:27:17,097 | INFO     | total number of processed events: 400 (read)
[2026-05-29 07:28:07] 2026-05-29 05:27:17,113 | INFO     | using path: /var/lib/boinc/var/slot156/slots/1/PanDA_Pilot-7157449929/memory_monitor_summary.json (trf name=prmon)
[2026-05-29 07:28:07] 2026-05-29 05:27:17,113 | INFO     | extracted standard info from prmon json
[2026-05-29 07:28:07] 2026-05-29 05:27:17,113 | INFO     | extracted standard memory fields from prmon json
[2026-05-29 07:28:07] 2026-05-29 05:27:17,113 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-29 07:28:07] 2026-05-29 05:27:17,113 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-29 07:28:07] 2026-05-29 05:27:17,114 | INFO     | fitting pss+swap vs Time
[2026-05-29 07:28:07] 2026-05-29 05:27:17,114 | INFO     | sum of square deviations: 1518168.0
[2026-05-29 07:28:07] 2026-05-29 05:27:17,114 | INFO     | sum of deviations: -186882284.00000003
[2026-05-29 07:28:07] 2026-05-29 05:27:17,114 | INFO     | mean x (centered): 0.0
[2026-05-29 07:28:07] 2026-05-29 05:27:17,114 | INFO     | mean y: 2780298.2352941176
[2026-05-29 07:28:07] 2026-05-29 05:27:17,114 | INFO     | intersect: 2780298.2352941176
[2026-05-29 07:28:07] 2026-05-29 05:27:17,114 | INFO     | chi2: 0.002477116475716639
[2026-05-29 07:28:07] 2026-05-29 05:27:17,114 | INFO     | current memory leak: -123.10 B/s (using 17 data points, chi2=0.00)
[2026-05-29 07:28:07] 2026-05-29 05:27:17,115 | INFO     | could have reported an average CPU frequency of 3677 MHz (4 samples)
[2026-05-29 07:28:07] 2026-05-29 05:27:17,115 | INFO     | ..............................
[2026-05-29 07:28:07] 2026-05-29 05:27:17,115 | INFO     | . Timing measurements:
[2026-05-29 07:28:07] 2026-05-29 05:27:17,115 | INFO     | . get job = 0 s
[2026-05-29 07:28:07] 2026-05-29 05:27:17,115 | INFO     | . initial setup = 3 s
[2026-05-29 07:28:07] 2026-05-29 05:27:17,115 | INFO     | . payload setup = 4 s
[2026-05-29 07:28:07] 2026-05-29 05:27:17,115 | INFO     | . stage-in = 0 s
[2026-05-29 07:28:07] 2026-05-29 05:27:17,115 | INFO     | . payload execution = 1433 s
[2026-05-29 07:28:07] 2026-05-29 05:27:17,115 | INFO     | . stage-out = 0 s
[2026-05-29 07:28:07] 2026-05-29 05:27:17,115 | INFO     | . log creation = 0 s
[2026-05-29 07:28:07] 2026-05-29 05:27:17,115 | INFO     | ..............................
[2026-05-29 07:28:07] 2026-05-29 05:27:17,156 | INFO     | 
[2026-05-29 07:28:07] 2026-05-29 05:27:17,156 | INFO     | job summary report
[2026-05-29 07:28:07] 2026-05-29 05:27:17,156 | INFO     | --------------------------------------------------
[2026-05-29 07:28:07] 2026-05-29 05:27:17,156 | INFO     | PanDA job id: 7157449929
[2026-05-29 07:28:07] 2026-05-29 05:27:17,156 | INFO     | task id: 50533925
[2026-05-29 07:28:07] 2026-05-29 05:27:17,156 | INFO     | errors: (none)
[2026-05-29 07:28:07] 2026-05-29 05:27:17,156 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-29 07:28:07] 2026-05-29 05:27:17,156 | INFO     | pilot state: finished 
[2026-05-29 07:28:07] 2026-05-29 05:27:17,156 | INFO     | transexitcode: 0
[2026-05-29 07:28:07] 2026-05-29 05:27:17,156 | INFO     | exeerrorcode: 0
[2026-05-29 07:28:07] 2026-05-29 05:27:17,156 | INFO     | exeerrordiag: 
[2026-05-29 07:28:07] 2026-05-29 05:27:17,156 | INFO     | exitcode: 0
[2026-05-29 07:28:07] 2026-05-29 05:27:17,156 | INFO     | exitmsg: OK
[2026-05-29 07:28:07] 2026-05-29 05:27:17,156 | INFO     | cpuconsumptiontime: 15358 s
[2026-05-29 07:28:07] 2026-05-29 05:27:17,156 | INFO     | nevents: 400
[2026-05-29 07:28:07] 2026-05-29 05:27:17,156 | INFO     | neventsw: 0
[2026-05-29 07:28:07] 2026-05-29 05:27:17,156 | INFO     | pid: 2351614
[2026-05-29 07:28:07] 2026-05-29 05:27:17,156 | INFO     | pgrp: 2351614
[2026-05-29 07:28:07] 2026-05-29 05:27:17,156 | INFO     | corecount: 12
[2026-05-29 07:28:07] 2026-05-29 05:27:17,156 | INFO     | event service: False
[2026-05-29 07:28:07] 2026-05-29 05:27:17,157 | INFO     | sizes: {0: 2265940, 1: 2267570, 11: 2267598, 1441: 2292368, 1442: 2301445, 1446: 2301767}
[2026-05-29 07:28:07] 2026-05-29 05:27:17,157 | INFO     | --------------------------------------------------
[2026-05-29 07:28:07] 2026-05-29 05:27:17,157 | INFO     | 
[2026-05-29 07:28:07] 2026-05-29 05:27:17,157 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot156/slots/1
[2026-05-29 07:28:07] 2026-05-29 05:27:17,171 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-29 07:28:07] 2026-05-29 05:27:17,171 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-29 07:28:07] 2026-05-29 05:27:17,171 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-29 07:28:07] 2026-05-29 05:27:17,172 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-29 07:28:07] 2026-05-29 05:27:17,172 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-29 07:28:07] 2026-05-29 05:27:17,172 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-29 07:28:07] 2026-05-29 05:27:17,172 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-29 07:28:07] 2026-05-29 05:27:17,172 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-29 07:28:07] 2026-05-29 05:27:17,172 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-29 07:28:07] 2026-05-29 05:27:17,172 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-29 07:28:07] 2026-05-29 05:27:17,172 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-29 07:28:07] 2026-05-29 05:27:17,172 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-29 07:28:07] 2026-05-29 05:27:17,172 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-29 07:28:07] 2026-05-29 05:27:17,172 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-29 07:28:07] 2026-05-29 05:27:17,172 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-29 07:28:07] 2026-05-29 05:27:17,172 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-29 07:28:07] 2026-05-29 05:27:17,172 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-29 07:28:07] 2026-05-29 05:27:17,172 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-29 07:28:07] 2026-05-29 05:27:17,172 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-29 07:28:07] 2026-05-29 05:27:17,172 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-29 07:28:07] 2026-05-29 05:27:17,172 | INFO     | job 7157449929 has completed (purged errors)
[2026-05-29 07:28:07] 2026-05-29 05:27:17,172 | INFO     | overall cleanup function is called
[2026-05-29 07:28:07] 2026-05-29 05:27:18,178 | INFO     | --- collectZombieJob: --- 10, [2351614]
[2026-05-29 07:28:07] 2026-05-29 05:27:18,179 | INFO     | zombie collector waiting for pid 2351614
[2026-05-29 07:28:07] 2026-05-29 05:27:18,179 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-29 07:28:07] 2026-05-29 05:27:18,179 | INFO     | collected zombie processes
[2026-05-29 07:28:07] 2026-05-29 05:27:18,179 | INFO     | will attempt to kill all subprocesses of pid=2351614
[2026-05-29 07:28:07] 2026-05-29 05:27:18,348 | INFO     | process IDs to be killed: [2351614] (in reverse order)
[2026-05-29 07:28:07] 2026-05-29 05:27:18,445 | WARNING  | found no corresponding commands to process id(s)
[2026-05-29 07:28:07] 2026-05-29 05:27:18,445 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-29 07:28:07] 2026-05-29 05:27:18,508 | INFO     | did not find any defunct processes belonging to 2351614
[2026-05-29 07:28:07] 2026-05-29 05:27:18,549 | INFO     | did not find any defunct processes belonging to 2351614
[2026-05-29 07:28:07] 2026-05-29 05:27:18,550 | INFO     | Ready for new job
[2026-05-29 07:28:07] 2026-05-29 05:27:18,551 | INFO     | ***************************************
[2026-05-29 07:28:07] 2026-05-29 05:27:18,551 | INFO     | ***  PanDA Pilot version 3.13.1.30  ***
[2026-05-29 07:28:07] 2026-05-29 05:27:18,551 | INFO     | ***************************************
[2026-05-29 07:28:07] 2026-05-29 05:27:18,551 | INFO     | 
[2026-05-29 07:28:07] 2026-05-29 05:27:18,555 | INFO     | architecture information:
[2026-05-29 07:28:07] 2026-05-29 05:27:18,555 | INFO     | executing command: cat /etc/os-release
[2026-05-29 07:28:07] 2026-05-29 05:27:18,563 | INFO     | cat /etc/os-release:
[2026-05-29 07:28:07] NAME="CentOS Linux"
[2026-05-29 07:28:07] VERSION="7 (Core)"
[2026-05-29 07:28:07] ID="centos"
[2026-05-29 07:28:07] ID_LIKE="rhel fedora"
[2026-05-29 07:28:07] VERSION_ID="7"
[2026-05-29 07:28:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-29 07:28:07] ANSI_COLOR="0;31"
[2026-05-29 07:28:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-29 07:28:07] HOME_URL="https://www.centos.org/"
[2026-05-29 07:28:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-29 07:28:07] 
[2026-05-29 07:28:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-29 07:28:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-29 07:28:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-29 07:28:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-29 07:28:07] 
[2026-05-29 07:28:07] 2026-05-29 05:27:18,563 | INFO     | ***************************************
[2026-05-29 07:28:07] 2026-05-29 05:27:18,657 | WARNING  | process 2351614 can no longer be monitored (due to stat problems) - aborting
[2026-05-29 07:28:07] 2026-05-29 05:27:18,809 | INFO     | using path: /var/lib/boinc/var/slot156/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-05-29 07:28:07] 2026-05-29 05:27:18,975 | INFO     | number of running child processes to parent process 2351614: 1
[2026-05-29 07:28:07] 2026-05-29 05:27:18,975 | INFO     | maximum number of monitored processes: 6
[2026-05-29 07:28:07] 2026-05-29 05:27:18,975 | INFO     | aborting job monitoring since job object (job id=7157449929) has expired
[2026-05-29 07:28:07] 2026-05-29 05:27:19,066 | INFO     | executing command: df -mP /var/lib/boinc/var/slot156/slots/1
[2026-05-29 07:28:07] 2026-05-29 05:27:19,079 | INFO     | sufficient remaining disk space (328077410304 B)
[2026-05-29 07:28:07] 2026-05-29 05:27:19,079 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-29 07:28:07] 2026-05-29 05:27:19,079 | INFO     | current server update state: UPDATING_FINAL
[2026-05-29 07:28:07] 2026-05-29 05:27:19,079 | INFO     | update_server=False
[2026-05-29 07:28:07] 2026-05-29 05:27:19,079 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-29 07:28:07] 2026-05-29 05:27:19,079 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-29 07:28:07] 2026-05-29 05:27:19,080 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-29 07:28:07] 2026-05-29 05:27:19,080 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-29 07:28:07] 2026-05-29 05:27:19,080 | INFO     | will abort loop
[2026-05-29 07:28:07] 2026-05-29 05:27:19,154 | INFO     | all data control threads have been joined
[2026-05-29 07:28:07] 2026-05-29 05:27:19,217 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-29 07:28:07] 2026-05-29 05:27:19,303 | INFO     | all payload control threads have been joined
[2026-05-29 07:28:07] 2026-05-29 05:27:19,607 | INFO     | all job control threads have been joined
[2026-05-29 07:28:07] 2026-05-29 05:27:20,085 | INFO     | [job] retrieve thread has finished
[2026-05-29 07:28:07] 2026-05-29 05:27:20,085 | INFO     | [job] queue monitor thread has finished
[2026-05-29 07:28:07] 2026-05-29 05:27:20,086 | INFO     | [job] job monitor thread has finished
[2026-05-29 07:28:07] 2026-05-29 05:27:20,160 | INFO     | [data] control thread has finished
[2026-05-29 07:28:07] 2026-05-29 05:27:20,308 | INFO     | [payload] control thread has finished
[2026-05-29 07:28:07] 2026-05-29 05:27:20,458 | INFO     | [payload] validate_post thread has finished
[2026-05-29 07:28:07] 2026-05-29 05:27:20,528 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-29 07:28:07] 2026-05-29 05:27:20,613 | INFO     | [job] control thread has finished
[2026-05-29 07:28:07] 2026-05-29 05:27:20,723 | INFO     | [job] validate thread has finished
[2026-05-29 07:28:07] 2026-05-29 05:27:20,782 | INFO     | [job] create_data_payload thread has finished
[2026-05-29 07:28:07] 2026-05-29 05:27:20,814 | INFO     | [payload] validate_pre thread has finished
[2026-05-29 07:28:07] 2026-05-29 05:27:20,986 | INFO     | [data] copytool_in thread has finished
[2026-05-29 07:28:07] 2026-05-29 05:27:21,009 | INFO     | [payload] execute_payloads thread has finished
[2026-05-29 07:28:07] 2026-05-29 05:27:21,222 | INFO     | [data] copytool_out thread has finished
[2026-05-29 07:28:07] 2026-05-29 05:27:21,516 | INFO     | [payload] failed_post thread has finished
[2026-05-29 07:28:07] 2026-05-29 05:27:23,086 | INFO     | [data] queue_monitor thread has finished
[2026-05-29 07:28:07] 2026-05-29 05:27:49,954 | INFO     | PID=2345707 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-29 07:28:07] 2026-05-29 05:27:49,954 | INFO     | .. there are 7 such processes running
[2026-05-29 07:28:07] 2026-05-29 05:27:49,955 | INFO     | found 0 job(s) in 20 queues
[2026-05-29 07:28:07] 2026-05-29 05:27:49,955 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-29 07:28:07] 2026-05-29 05:27:49,955 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-29 07:28:07] 2026-05-29 05:28:02,107 | INFO     | [monitor] cgroup control has ended
[2026-05-29 07:28:07] 2026-05-29 05:28:02,193 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22805073020736)>', '<ExcThread(monitor, started 22804834821888)>']
[2026-05-29 07:28:07] 2026-05-29 05:28:03,021 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-29 07:28:07] 2026-05-29 05:28:03,021 | INFO     | [monitor] control thread has ended
[2026-05-29 07:28:07] 2026-05-29 05:28:07,219 | INFO     | all workflow threads have been joined
[2026-05-29 07:28:07] 2026-05-29 05:28:07,219 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-29 07:28:07] 2026-05-29 05:28:07,219 | INFO     | traces error code: 0
[2026-05-29 07:28:07] 2026-05-29 05:28:07,219 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-29 07:28:07] 2026-05-29 05:28:07,306 [wrapper] ==== pilot stdout END ====
[2026-05-29 07:28:07] 2026-05-29 05:28:07,308 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-29 07:28:07] 2026-05-29 05:28:07,310 [wrapper] pilotpid: 2345707
[2026-05-29 07:28:07] 2026-05-29 05:28:07,312 [wrapper] Pilot exit status: 0
[2026-05-29 07:28:07] 2026-05-29 05:28:07,320 [wrapper] pandaids: 7157449929
[2026-05-29 07:28:07] 2026-05-29 05:28:07,392 [wrapper] cleanup supervisor_pilot 2404244 2345708
[2026-05-29 07:28:07] 2026-05-29 05:28:07,394 [wrapper] Test setup, not cleaning
[2026-05-29 07:28:07] 2026-05-29 05:28:07,395 [wrapper] apfmon messages muted
[2026-05-29 07:28:07] 2026-05-29 05:28:07,396 [wrapper] ==== wrapper stdout END ====
[2026-05-29 07:28:07] 2026-05-29 05:28:07,397 [wrapper] ==== wrapper stderr END ====
[2026-05-29 07:28:07]  *** Error codes and diagnostics ***
[2026-05-29 07:28:07]     "exeErrorCode": 0,
[2026-05-29 07:28:07]     "pilotErrorCode": 0,
[2026-05-29 07:28:07]  *** Listing of results directory ***
[2026-05-29 07:28:07] total 520196
[2026-05-29 07:28:07] -rw-r--r--. 1 boinc boinc    709501 May 29 02:20 pilot3.tar.gz
[2026-05-29 07:28:07] -rwx------. 1 boinc boinc     36281 May 29 02:21 runpilot2-wrapper.sh
[2026-05-29 07:28:07] -rw-r--r--. 1 boinc boinc      5631 May 29 02:22 queuedata.json
[2026-05-29 07:28:07] -rw-r--r--. 1 boinc boinc       100 May 29 07:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-29 07:28:07] -rwxr-xr-x. 1 boinc boinc      7986 May 29 07:02 run_atlas
[2026-05-29 07:28:07] -rw-r--r--. 1 boinc boinc       105 May 29 07:02 job.xml
[2026-05-29 07:28:07] -rw-r--r--. 2 boinc boinc     15667 May 29 07:02 start_atlas.sh
[2026-05-29 07:28:07] drwxrwx--x. 2 boinc boinc      4096 May 29 07:02 shared
[2026-05-29 07:28:07] -rw-r--r--. 2 boinc boinc    722729 May 29 07:02 input.tar.gz
[2026-05-29 07:28:07] -rw-r--r--. 1 boinc boinc      6630 May 29 07:02 init_data.xml
[2026-05-29 07:28:07] -rw-r--r--. 2 boinc boinc 299334231 May 29 07:02 EVNT.50469837._000064.pool.root.1
[2026-05-29 07:28:07] -rw-r--r--. 1 boinc boinc         0 May 29 07:02 boinc_lockfile
[2026-05-29 07:28:07] -rw-r--r--. 1 boinc boinc      2512 May 29 07:02 pandaJob.out
[2026-05-29 07:28:07] -rw-------. 1 boinc boinc    996138 May 29 07:02 agis_schedconf.cvmfs.json
[2026-05-29 07:28:07] -rw-------. 1 boinc boinc         0 May 29 07:02 agis_ddmendpoints.agis.ALL.json
[2026-05-29 07:28:07] -rw-------. 1 boinc boinc   1251485 May 29 07:02 cric_ddmendpoints.json
[2026-05-29 07:28:07] -rw-------. 1 boinc boinc       445 May 29 07:02 workernode_map.json
[2026-05-29 07:28:07] drwx------. 5 boinc boinc      4096 May 29 07:03 pilot3
[2026-05-29 07:28:07] -rw-r--r--. 1 boinc boinc       487 May 29 07:26 boinc_task_state.xml
[2026-05-29 07:28:07] -rw-------. 1 boinc boinc 228395210 May 29 07:26 HITS.50533925._001581.pool.root.1
[2026-05-29 07:28:07] -rw-------. 1 boinc boinc      1029 May 29 07:27 memory_monitor_summary.json
[2026-05-29 07:28:07] -rw-------. 1 boinc boinc    322824 May 29 07:27 log.50533925._001581.job.log.tgz.1
[2026-05-29 07:28:07] -rw-------. 1 boinc boinc      6424 May 29 07:27 heartbeat_new.json
[2026-05-29 07:28:07] -rw-------. 1 boinc boinc      6315 May 29 07:27 heartbeat.json
[2026-05-29 07:28:07] -rw-------. 1 boinc boinc        95 May 29 07:27 pilot_heartbeat.json
[2026-05-29 07:28:07] -rw-r--r--. 1 boinc boinc        27 May 29 07:28 wrapper_checkpoint.txt
[2026-05-29 07:28:07] -rw-r--r--. 1 boinc boinc      8192 May 29 07:28 boinc_mmap_file
[2026-05-29 07:28:07] -rw-------. 1 boinc boinc      5366 May 29 07:28 pilotlog.txt
[2026-05-29 07:28:07] -rw-------. 1 boinc boinc    187951 May 29 07:28 log.50533925._001581.job.log.1
[2026-05-29 07:28:07] -rw-------. 1 boinc boinc       357 May 29 07:28 output.list
[2026-05-29 07:28:07] -rw-r--r--. 1 boinc boinc       410 May 29 07:28 runtime_log
[2026-05-29 07:28:07] -rw-------. 1 boinc boinc    532480 May 29 07:28 result.tar.gz
[2026-05-29 07:28:07] -rw-r--r--. 1 boinc boinc      8846 May 29 07:28 runtime_log.err
[2026-05-29 07:28:07] -rw-------. 1 boinc boinc       659 May 29 07:28 dc19c3b3e929.diag
[2026-05-29 07:28:07] -rw-r--r--. 1 boinc boinc     20521 May 29 07:28 stderr.txt
[2026-05-29 07:28:07] HITS file was successfully produced:
[2026-05-29 07:28:07] -rw-------. 1 boinc boinc 228395210 May 29 07:26 shared/HITS.pool.root.1
[2026-05-29 07:28:07]  *** Contents of shared directory: ***
[2026-05-29 07:28:07] total 516616
[2026-05-29 07:28:07] -rw-r--r--. 2 boinc boinc     15667 May 29 07:02 start_atlas.sh
[2026-05-29 07:28:07] -rw-r--r--. 2 boinc boinc    722729 May 29 07:02 input.tar.gz
[2026-05-29 07:28:07] -rw-r--r--. 2 boinc boinc 299334231 May 29 07:02 ATLAS.root_0
[2026-05-29 07:28:07] -rw-------. 1 boinc boinc 228395210 May 29 07:26 HITS.pool.root.1
[2026-05-29 07:28:07] -rw-------. 1 boinc boinc    532480 May 29 07:28 result.tar.gz
07:28:09 (2340785): run_atlas exited; CPU time 15378.089876
07:28:09 (2340785): called boinc_finish(0)

</stderr_txt>
]]>

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