Stderr output

<core_client_version>8.2.13</core_client_version>
<![CDATA[
<stderr_txt>
2026-05-29 21:44:23 (1702620): vboxwrapper version 26210
2026-05-29 21:44:23 (1702620): BOINC client version: 8.2.13
2026-05-29 21:44:24 (1702620): Detected: VirtualBox VboxManage Interface (Version: 7.0.16)
2026-05-29 21:44:24 (1702620): Successfully copied 'init_data.xml' to the shared directory.
2026-05-29 21:44:24 (1702620): Create VM. (boinc_8ad898f0daecd43a, slot#37)
2026-05-29 21:44:24 (1702620): Setting Memory Size for VM. (4400MB)
2026-05-29 21:44:24 (1702620): Setting CPU Count for VM. (4)
2026-05-29 21:44:24 (1702620): Setting Chipset Options for VM.
2026-05-29 21:44:24 (1702620): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-05-29 21:44:24 (1702620): Setting Boot Options for VM.
2026-05-29 21:44:24 (1702620): Setting Network Configuration for NAT. (Driver: virtio)
2026-05-29 21:44:24 (1702620): Enabling VM Network Access.
2026-05-29 21:44:24 (1702620): Disabling USB Support for VM.
2026-05-29 21:44:24 (1702620): Disabling COM Port Support for VM.
2026-05-29 21:44:24 (1702620): Disabling LPT Port Support for VM.
2026-05-29 21:44:25 (1702620): Disabling Audio Support for VM.
2026-05-29 21:44:25 (1702620): Disabling Clipboard Support for VM.
2026-05-29 21:44:25 (1702620): Disabling Drag and Drop Support for VM.
2026-05-29 21:44:25 (1702620): Adding storage controller(s) to VM.
2026-05-29 21:44:25 (1702620): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-05-29 21:44:25 (1702620): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-05-29 21:44:25 (1702620): forwarding host port 52251 to guest port 80
2026-05-29 21:44:25 (1702620): Enabling remote desktop for VM.
2026-05-29 21:44:25 (1702620): Enabling shared directory for VM.
2026-05-29 21:44:26 (1702620): Starting VM using VBoxManage interface. (boinc_8ad898f0daecd43a, slot#37)
2026-05-29 21:44:27 (1702620): Successfully started VM. (PID = '1703113')
2026-05-29 21:44:27 (1702620): Reporting VM Process ID to BOINC.
2026-05-29 21:44:27 (1702620): Guest Log: BIOS: VirtualBox 7.0.16
2026-05-29 21:44:27 (1702620): Guest Log: CPUID EDX: 0x178bfbff
2026-05-29 21:44:27 (1702620): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-05-29 21:44:27 (1702620): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-05-29 21:44:27 (1702620): VM state change detected. (old = 'poweredoff', new = 'running')
2026-05-29 21:44:27 (1702620): Detected: Web Application Enabled (http://localhost:52251)
2026-05-29 21:44:27 (1702620): Detected: Remote Desktop Enabled (localhost:46861)
2026-05-29 21:44:27 (1702620): Preference change detected
2026-05-29 21:44:27 (1702620): Setting CPU throttle for VM. (100%)
2026-05-29 21:44:27 (1702620): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2026-05-29 21:44:29 (1702620): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-05-29 21:44:29 (1702620): Guest Log: BIOS: Booting from Hard Disk...
2026-05-29 21:44:32 (1702620): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-05-29 21:44:32 (1702620): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-05-29 21:44:32 (1702620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-05-29 21:44:32 (1702620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-05-29 21:44:32 (1702620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-05-29 21:44:32 (1702620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-05-29 21:44:32 (1702620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-05-29 21:44:32 (1702620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-05-29 21:44:32 (1702620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-05-29 21:44:32 (1702620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-05-29 21:44:32 (1702620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-05-29 21:44:32 (1702620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-05-29 21:44:32 (1702620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-05-29 21:44:32 (1702620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-05-29 21:44:32 (1702620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-05-29 21:44:32 (1702620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-05-29 21:44:32 (1702620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-05-29 21:44:32 (1702620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-05-29 21:44:32 (1702620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-05-29 21:44:32 (1702620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-05-29 21:44:32 (1702620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-05-29 21:44:32 (1702620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-05-29 21:44:32 (1702620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-05-29 21:44:32 (1702620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-05-29 21:44:32 (1702620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-05-29 21:44:32 (1702620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-05-29 21:44:32 (1702620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-05-29 21:44:32 (1702620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-05-29 21:44:32 (1702620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-05-29 21:44:32 (1702620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-05-29 21:44:32 (1702620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-05-29 21:44:32 (1702620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-05-29 21:44:38 (1702620): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-05-29 21:44:38 (1702620): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-05-29 21:44:44 (1702620): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-05-29 21:44:44 (1702620): Guest Log: 00:00:00.000160 main     Log opened 2026-05-29T11:44:42.795657000Z
2026-05-29 21:44:44 (1702620): Guest Log: 00:00:00.000237 main     OS Product: Linux
2026-05-29 21:44:44 (1702620): Guest Log: 00:00:00.000262 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-05-29 21:44:44 (1702620): Guest Log: 00:00:00.000280 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-05-29 21:44:44 (1702620): Guest Log: 00:00:00.000298 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-05-29 21:44:44 (1702620): Guest Log: 00:00:00.000299 main     Process ID: 1296
2026-05-29 21:44:44 (1702620): Guest Log: 00:00:00.000299 main     Package type: LINUX_64BITS_GENERIC
2026-05-29 21:44:44 (1702620): Guest Log: 00:00:00.001709 main     5.2.32 r132073 started. Verbose level = 0
2026-05-29 21:44:44 (1702620): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-05-29 21:44:44 (1702620): Guest Log: [INFO] Mounting shared directory
2026-05-29 21:44:44 (1702620): Guest Log: [INFO] Checking for init_data.xml
2026-05-29 21:44:52 (1702620): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-05-29 21:44:52 (1702620): Guest Log: [INFO] Detected branch: prod
2026-05-29 21:44:52 (1702620): Guest Log: This is the prod version of the ATLAS job wrapper
2026-05-29 21:44:52 (1702620): Guest Log: Copying input files
2026-05-29 21:44:53 (1702620): Guest Log: Copied input files into RunAtlas.
2026-05-29 21:44:53 (1702620): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-05-29 21:44:53 (1702620): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-05-29 21:44:53 (1702620): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-05-29 21:44:53 (1702620): Guest Log: Further information can be found at the LHC@home message board.
2026-05-29 21:45:04 (1702620): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-05-29 21:45:04 (1702620): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-05-29 21:45:04 (1702620): Guest Log: 2.6.3.0 1577 0 32124 159931 4 1 3117654 4096001 0 65024 0 0 n/a 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-05-29 21:45:05 (1702620): Guest Log: copied the webapp to /var/www
2026-05-29 21:45:05 (1702620): Guest Log: ATHENA_PROC_NUMBER=4
2026-05-29 21:45:05 (1702620): Guest Log: ATHENA_CORE_NUMBER=4
2026-05-29 21:45:05 (1702620): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-05-29 21:45:06 (1702620): Guest Log:  *** Starting ATLAS job. (PandaID=7157451001 taskID=50533925) ***
2026-05-29 22:50:54 (1702620): Preference change detected
2026-05-29 22:50:54 (1702620): Setting CPU throttle for VM. (100%)
2026-05-29 22:50:54 (1702620): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2026-05-29 23:23:27 (1702620): Status Report: Elapsed Time: '6000.000000'
2026-05-29 23:23:27 (1702620): Status Report: CPU Time: '20712.270000'
2026-05-30 01:02:28 (1702620): Status Report: Elapsed Time: '12000.000000'
2026-05-30 01:02:28 (1702620): Status Report: CPU Time: '44317.480000'
2026-05-30 01:06:56 (1702620): Guest Log:  *** Job finished ***
2026-05-30 01:06:56 (1702620): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-05-30 01:06:56 (1702620): Guest Log: 2026-05-29 15:06:15,893 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-05-30 01:06:56 (1702620): Guest Log: 2026-05-29 15:06:15,893 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-05-30 01:06:56 (1702620): Guest Log: 2026-05-29 15:06:45,247 | INFO     | [monitor] cgroup control has ended
2026-05-30 01:06:56 (1702620): Guest Log: 2026-05-29 15:06:47,278 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139794024621888)>', '<ExcThread(monitor, started 139793451177728)>']
2026-05-30 01:06:56 (1702620): Guest Log: 2026-05-29 15:06:47,948 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-05-30 01:06:56 (1702620): Guest Log: 2026-05-29 15:06:47,948 | INFO     | [monitor] control thread has ended
2026-05-30 01:06:56 (1702620): Guest Log: 2026-05-29 15:06:52,286 | INFO     | all workflow threads have been joined
2026-05-30 01:06:56 (1702620): Guest Log: 2026-05-29 15:06:52,286 | INFO     | end of generic workflow (traces error code: 0)
2026-05-30 01:06:56 (1702620): Guest Log: 2026-05-29 15:06:52,287 | INFO     | traces error code: 0
2026-05-30 01:06:56 (1702620): Guest Log: 2026-05-29 15:06:52,288 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-05-30 01:06:56 (1702620): Guest Log: 2026-05-29 15:06:52,382 [wrapper] ==== pilot stdout END ====
2026-05-30 01:06:56 (1702620): Guest Log: 2026-05-29 15:06:52,386 [wrapper] ==== wrapper stdout RESUME ====
2026-05-30 01:06:56 (1702620): Guest Log: 2026-05-29 15:06:52,391 [wrapper] pilotpid: 5997
2026-05-30 01:06:56 (1702620): Guest Log: 2026-05-29 15:06:52,396 [wrapper] Pilot exit status: 0
2026-05-30 01:06:56 (1702620): Guest Log: 2026-05-29 15:06:52,448 [wrapper] pandaids: 7157451001
2026-05-30 01:06:56 (1702620): Guest Log: 2026-05-29 15:06:52,491 [wrapper] cleanup supervisor_pilot 27920 5998
2026-05-30 01:06:56 (1702620): Guest Log: 2026-05-29 15:06:52,502 [wrapper] Test setup, not cleaning
2026-05-30 01:06:56 (1702620): Guest Log: 2026-05-29 15:06:52,507 [wrapper] apfmon messages muted
2026-05-30 01:06:56 (1702620): Guest Log: 2026-05-29 15:06:52,513 [wrapper] ==== wrapper stdout END ====
2026-05-30 01:06:56 (1702620): Guest Log: 2026-05-29 15:06:52,518 [wrapper] ==== wrapper stderr END ====
2026-05-30 01:06:56 (1702620): Guest Log:  *** Error codes and diagnostics ***
2026-05-30 01:06:56 (1702620): Guest Log:     "exeErrorCode": 0,
2026-05-30 01:06:56 (1702620): Guest Log:     "pilotErrorCode": 0,
2026-05-30 01:06:56 (1702620): Guest Log:  *** Listing of results directory ***
2026-05-30 01:06:56 (1702620): Guest Log: total 225108
2026-05-30 01:06:56 (1702620): Guest Log: -rw-r--r--. 1 atlas atlas    709501 May 29 03:03 pilot3.tar.gz
2026-05-30 01:06:56 (1702620): Guest Log: -rwx------. 1 atlas atlas     36281 May 29 03:06 runpilot2-wrapper.sh
2026-05-30 01:06:56 (1702620): Guest Log: -rw-r--r--. 1 atlas atlas      5631 May 29 03:07 queuedata.json
2026-05-30 01:06:56 (1702620): Guest Log: -rw-r--r--. 1 atlas atlas      6132 May 29 11:44 init_data.xml
2026-05-30 01:06:56 (1702620): Guest Log: -rw-r--r--. 1 atlas atlas     15667 May 29 11:44 start_atlas.sh
2026-05-30 01:06:56 (1702620): Guest Log: -rw-r--r--. 1 atlas atlas    722730 May 29 11:44 input.tar.gz
2026-05-30 01:06:56 (1702620): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 29 11:44 EVNT.50469837._000086.pool.root.1 -> /data/./ATLAS.root_0
2026-05-30 01:06:56 (1702620): Guest Log: -rw-r--r--. 1 atlas atlas      2513 May 29 11:45 pandaJob.out
2026-05-30 01:06:56 (1702620): Guest Log: -rw-------. 1 atlas atlas    995529 May 29 11:46 agis_schedconf.cvmfs.json
2026-05-30 01:06:56 (1702620): Guest Log: -rw-------. 1 atlas atlas   1251485 May 29 11:46 cric_ddmendpoints.json
2026-05-30 01:06:56 (1702620): Guest Log: -rw-------. 1 atlas atlas       426 May 29 11:46 workernode_map.json
2026-05-30 01:06:56 (1702620): Guest Log: drwx------. 5 atlas atlas      4096 May 29 11:46 pilot3
2026-05-30 01:06:56 (1702620): Guest Log: -rw-------. 1 atlas atlas 223859409 May 29 15:05 HITS.50533925._002131.pool.root.1
2026-05-30 01:06:56 (1702620): Guest Log: -rw-------. 1 atlas atlas      1033 May 29 15:05 memory_monitor_summary.json
2026-05-30 01:06:56 (1702620): Guest Log: -rw-------. 1 atlas atlas         0 May 29 15:05 agis_ddmendpoints.agis.ALL.json
2026-05-30 01:06:56 (1702620): Guest Log: -rw-------. 1 atlas atlas    301911 May 29 15:05 log.50533925._002131.job.log.tgz.1
2026-05-30 01:06:56 (1702620): Guest Log: -rw-------. 1 atlas atlas      6450 May 29 15:05 heartbeat_new.json
2026-05-30 01:06:56 (1702620): Guest Log: -rw-------. 1 atlas atlas      6341 May 29 15:05 heartbeat.json
2026-05-30 01:06:56 (1702620): Guest Log: -rw-------. 1 atlas atlas        95 May 29 15:06 pilot_heartbeat.json
2026-05-30 01:06:56 (1702620): Guest Log: -rw-------. 1 atlas atlas      4990 May 29 15:06 pilotlog.txt
2026-05-30 01:06:56 (1702620): Guest Log: -rw-------. 1 atlas atlas   1098148 May 29 15:06 log.50533925._002131.job.log.1
2026-05-30 01:06:56 (1702620): Guest Log: -rw-------. 1 atlas atlas       357 May 29 15:06 output.list
2026-05-30 01:06:56 (1702620): Guest Log: -rw-r--r--. 1 atlas atlas       410 May 29 15:06 runtime_log
2026-05-30 01:06:56 (1702620): Guest Log: -rw-------. 1 atlas atlas   1413120 May 29 15:06 result.tar.gz
2026-05-30 01:06:56 (1702620): Guest Log: -rw-r--r--. 1 atlas atlas      8375 May 29 15:06 runtime_log.err
2026-05-30 01:06:56 (1702620): Guest Log: -rw-------. 1 atlas atlas       658 May 29 15:06 02c28b973cd5.diag
2026-05-30 01:06:56 (1702620): Guest Log: Looking for outputfile HITS.50533925._002131.pool.root.1
2026-05-30 01:06:56 (1702620): Guest Log: HITS file was successfully produced
2026-05-30 01:06:56 (1702620): Guest Log: -rw-------. 1 atlas atlas 223859409 May 29 15:05 /home/atlas/RunAtlas/HITS.50533925._002131.pool.root.1
2026-05-30 01:06:56 (1702620): Guest Log: Successfully finished the ATLAS job!
2026-05-30 01:06:56 (1702620): Guest Log: Copying the results back to the shared directory!
2026-05-30 01:06:56 (1702620): Guest Log:  *** Contents of shared directory: ***
2026-05-30 01:06:56 (1702620): Guest Log: total 288528
2026-05-30 01:06:56 (1702620): Guest Log: -rw-r--r--. 1 root root 293284505 May 29 11:44 ATLAS.root_0
2026-05-30 01:06:56 (1702620): Guest Log: -rw-r--r--. 1 root root      6132 May 29 11:44 init_data.xml
2026-05-30 01:06:56 (1702620): Guest Log: -rw-r--r--. 1 root root    722730 May 29 11:44 input.tar.gz
2026-05-30 01:06:56 (1702620): Guest Log: -rw-r--r--. 1 root root   1413120 May 29 15:06 result.tar.gz
2026-05-30 01:06:56 (1702620): Guest Log: -rw-r--r--. 1 root root     15667 May 29 11:44 start_atlas.sh
2026-05-30 01:06:56 (1702620): Guest Log:  *** Success! Shutting down the machine. ***
2026-05-30 01:06:57 (1702620): VM Completion File Detected.
2026-05-30 01:06:57 (1702620): Powering off VM.
2026-05-30 01:06:58 (1702620): Successfully stopped VM.
2026-05-30 01:06:58 (1702620): Deregistering VM. (boinc_8ad898f0daecd43a, slot#37)
2026-05-30 01:06:58 (1702620): Removing network bandwidth throttle group from VM.
2026-05-30 01:06:58 (1702620): Removing VM from VirtualBox.
2026-05-30 01:07:03 (1702620): called boinc_finish(0)

</stderr_txt>
]]>

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