Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:01:53 (30311): wrapper (7.7.26015): starting
01:01:53 (30311): wrapper: running run_atlas (--nthreads 8)
[2026-05-30 01:01:53] Arguments: --nthreads 8
[2026-05-30 01:01:53] Threads: 8
[2026-05-30 01:01:53] Checking for CVMFS
[2026-05-30 01:01:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-30 01:01:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-30 01:01:55] Running cvmfs_config stat atlas.cern.ch
[2026-05-30 01:01:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-30 01:01:56] 2.11.2.0 14082 63735 130472 159947 0 55 20094598 25165824 1027 130560 0 30529731 99.888 16357353 8632 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-30 01:01:56] CVMFS is ok
[2026-05-30 01:01:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-30 01:01:56] Checking for apptainer binary...
[2026-05-30 01:01:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-30 01:01:56] Running /usr/bin/apptainer --version
[2026-05-30 01:01:56] apptainer version 1.3.2-1.el7
[2026-05-30 01:01:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-30 01:02:09] cg-vwn270.simple-grid.lan
[2026-05-30 01:02:09] apptainer works
[2026-05-30 01:02:09] Set ATHENA_PROC_NUMBER=8
[2026-05-30 01:02:09] Set ATHENA_CORE_NUMBER=8
[2026-05-30 01:02:09] Starting ATLAS job with PandaID=7157456069
[2026-05-30 01:02:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-30 05:05:08]  *** The last 200 lines of the pilot log: ***
[2026-05-30 05:05:08] 2026-05-30 03:04:19,774 | INFO     | log transfer has been attempted: DONE
[2026-05-30 05:05:08] 2026-05-30 03:04:19,774 | INFO     | job 7157456069 has finished - writing final server update
[2026-05-30 05:05:08] 2026-05-30 03:04:19,774 | INFO     | total number of processed events: 400 (read)
[2026-05-30 05:05:08] 2026-05-30 03:04:19,776 | INFO     | using path: /var/lib/boinc/slots/15/PanDA_Pilot-7157456069/memory_monitor_summary.json (trf name=prmon)
[2026-05-30 05:05:08] 2026-05-30 03:04:19,777 | INFO     | extracted standard info from prmon json
[2026-05-30 05:05:08] 2026-05-30 03:04:19,777 | INFO     | extracted standard memory fields from prmon json
[2026-05-30 05:05:08] 2026-05-30 03:04:19,777 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-30 05:05:08] 2026-05-30 03:04:19,778 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-30 05:05:08] 2026-05-30 03:04:19,782 | INFO     | fitting pss+swap vs Time
[2026-05-30 05:05:08] 2026-05-30 03:04:19,783 | INFO     | sum of square deviations: 3579276412.5
[2026-05-30 05:05:08] 2026-05-30 03:04:19,785 | INFO     | sum of deviations: 93405350860.00018
[2026-05-30 05:05:08] 2026-05-30 03:04:19,785 | INFO     | mean x (centered): 0.0
[2026-05-30 05:05:08] 2026-05-30 03:04:19,785 | INFO     | mean y: 2482771.778761062
[2026-05-30 05:05:08] 2026-05-30 03:04:19,785 | INFO     | intersect: 2482771.778761062
[2026-05-30 05:05:08] 2026-05-30 03:04:19,786 | INFO     | chi2: 9.563881894374807
[2026-05-30 05:05:08] 2026-05-30 03:04:19,786 | INFO     | sum of square deviations: 3346927870.0
[2026-05-30 05:05:08] 2026-05-30 03:04:19,788 | INFO     | sum of deviations: 106811290725.99998
[2026-05-30 05:05:08] 2026-05-30 03:04:19,788 | INFO     | mean x (centered): 0.0
[2026-05-30 05:05:08] 2026-05-30 03:04:19,788 | INFO     | mean y: 2491391.3167420817
[2026-05-30 05:05:08] 2026-05-30 03:04:19,788 | INFO     | intersect: 2491391.3167420817
[2026-05-30 05:05:08] 2026-05-30 03:04:19,789 | INFO     | chi2: 8.891039744061507
[2026-05-30 05:05:08] 2026-05-30 03:04:19,789 | INFO     | current chi2=8.891039744061507 (change=7.035241105487161 %)
[2026-05-30 05:05:08] 2026-05-30 03:04:19,789 | INFO     | right removable region: 220
[2026-05-30 05:05:08] 2026-05-30 03:04:19,790 | INFO     | sum of square deviations: 3346927870.0
[2026-05-30 05:05:08] 2026-05-30 03:04:19,795 | INFO     | sum of deviations: 10150690787.000013
[2026-05-30 05:05:08] 2026-05-30 03:04:19,796 | INFO     | mean x (centered): 0.0
[2026-05-30 05:05:08] 2026-05-30 03:04:19,796 | INFO     | mean y: 2537401.0904977378
[2026-05-30 05:05:08] 2026-05-30 03:04:19,796 | INFO     | intersect: 2537401.0904977378
[2026-05-30 05:05:08] 2026-05-30 03:04:19,796 | INFO     | chi2: 3.984266704013452
[2026-05-30 05:05:08] 2026-05-30 03:04:19,796 | INFO     | current chi2=3.984266704013452 (change=58.34048613296993 %)
[2026-05-30 05:05:08] 2026-05-30 03:04:19,797 | INFO     | sum of square deviations: 3124858590.0
[2026-05-30 05:05:08] 2026-05-30 03:04:19,799 | INFO     | sum of deviations: -50940842671.49999
[2026-05-30 05:05:08] 2026-05-30 03:04:19,799 | INFO     | mean x (centered): 0.0
[2026-05-30 05:05:08] 2026-05-30 03:04:19,799 | INFO     | mean y: 2579270.2916666665
[2026-05-30 05:05:08] 2026-05-30 03:04:19,799 | INFO     | intersect: 2579270.2916666665
[2026-05-30 05:05:08] 2026-05-30 03:04:19,799 | INFO     | chi2: 1.152972664850764
[2026-05-30 05:05:08] 2026-05-30 03:04:19,800 | INFO     | current chi2=1.152972664850764 (change=71.06186029942862 %)
[2026-05-30 05:05:08] 2026-05-30 03:04:19,800 | INFO     | sum of square deviations: 2912836010.0
[2026-05-30 05:05:08] 2026-05-30 03:04:19,802 | INFO     | sum of deviations: -61297477907.0
[2026-05-30 05:05:08] 2026-05-30 03:04:19,802 | INFO     | mean x (centered): 0.0
[2026-05-30 05:05:08] 2026-05-30 03:04:19,802 | INFO     | mean y: 2586670.180094787
[2026-05-30 05:05:08] 2026-05-30 03:04:19,802 | INFO     | intersect: 2586670.180094787
[2026-05-30 05:05:08] 2026-05-30 03:04:19,803 | INFO     | chi2: 1.008294468199736
[2026-05-30 05:05:08] 2026-05-30 03:04:19,803 | INFO     | current chi2=1.008294468199736 (change=12.548276386912846 %)
[2026-05-30 05:05:08] 2026-05-30 03:04:19,803 | INFO     | left removable region: 15
[2026-05-30 05:05:08] 2026-05-30 03:04:19,803 | INFO     | sum of square deviations: 2671343110.0
[2026-05-30 05:05:08] 2026-05-30 03:04:19,805 | INFO     | sum of deviations: -45135377054.000015
[2026-05-30 05:05:08] 2026-05-30 03:04:19,805 | INFO     | mean x (centered): 0.0
[2026-05-30 05:05:08] 2026-05-30 03:04:19,805 | INFO     | mean y: 2598660.019512195
[2026-05-30 05:05:08] 2026-05-30 03:04:19,805 | INFO     | intersect: 2598660.019512195
[2026-05-30 05:05:08] 2026-05-30 03:04:19,806 | INFO     | chi2: 0.21705530342858573
[2026-05-30 05:05:08] 2026-05-30 03:04:19,806 | INFO     | current memory leak: -16.90 B/s (using 205 data points, chi2=0.22)
[2026-05-30 05:05:08] 2026-05-30 03:04:19,807 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-05-30 05:05:08] 2026-05-30 03:04:19,809 | INFO     | ..............................
[2026-05-30 05:05:08] 2026-05-30 03:04:19,809 | INFO     | . Timing measurements:
[2026-05-30 05:05:08] 2026-05-30 03:04:19,809 | INFO     | . get job = 0 s
[2026-05-30 05:05:08] 2026-05-30 03:04:19,810 | INFO     | . initial setup = 113 s
[2026-05-30 05:05:08] 2026-05-30 03:04:19,810 | INFO     | . payload setup = 232 s
[2026-05-30 05:05:08] 2026-05-30 03:04:19,810 | INFO     | . stage-in = 0 s
[2026-05-30 05:05:08] 2026-05-30 03:04:19,810 | INFO     | . payload execution = 13890 s
[2026-05-30 05:05:08] 2026-05-30 03:04:19,810 | INFO     | . stage-out = 3 s
[2026-05-30 05:05:08] 2026-05-30 03:04:19,810 | INFO     | . log creation = 1 s
[2026-05-30 05:05:08] 2026-05-30 03:04:19,810 | INFO     | ..............................
[2026-05-30 05:05:08] 2026-05-30 03:04:19,931 | INFO     | 
[2026-05-30 05:05:08] 2026-05-30 03:04:19,931 | INFO     | job summary report
[2026-05-30 05:05:08] 2026-05-30 03:04:19,931 | INFO     | --------------------------------------------------
[2026-05-30 05:05:08] 2026-05-30 03:04:19,931 | INFO     | PanDA job id: 7157456069
[2026-05-30 05:05:08] 2026-05-30 03:04:19,931 | INFO     | task id: 50533925
[2026-05-30 05:05:08] 2026-05-30 03:04:19,932 | INFO     | errors: (none)
[2026-05-30 05:05:08] 2026-05-30 03:04:19,932 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-30 05:05:08] 2026-05-30 03:04:19,932 | INFO     | pilot state: finished 
[2026-05-30 05:05:08] 2026-05-30 03:04:19,932 | INFO     | transexitcode: 0
[2026-05-30 05:05:08] 2026-05-30 03:04:19,932 | INFO     | exeerrorcode: 0
[2026-05-30 05:05:08] 2026-05-30 03:04:19,932 | INFO     | exeerrordiag: 
[2026-05-30 05:05:08] 2026-05-30 03:04:19,932 | INFO     | exitcode: 0
[2026-05-30 05:05:08] 2026-05-30 03:04:19,932 | INFO     | exitmsg: OK
[2026-05-30 05:05:08] 2026-05-30 03:04:19,932 | INFO     | cpuconsumptiontime: 65467 s
[2026-05-30 05:05:08] 2026-05-30 03:04:19,932 | INFO     | nevents: 400
[2026-05-30 05:05:08] 2026-05-30 03:04:19,933 | INFO     | neventsw: 0
[2026-05-30 05:05:08] 2026-05-30 03:04:19,933 | INFO     | pid: 6390
[2026-05-30 05:05:08] 2026-05-30 03:04:19,933 | INFO     | pgrp: 6390
[2026-05-30 05:05:08] 2026-05-30 03:04:19,933 | INFO     | corecount: 8
[2026-05-30 05:05:08] 2026-05-30 03:04:19,933 | INFO     | event service: False
[2026-05-30 05:05:08] 2026-05-30 03:04:19,933 | INFO     | sizes: {0: 2265760, 1: 2266015, 2: 2267589, 12: 2267617, 14127: 2298107, 14131: 2307107, 14132: 2307291, 14134: 2307485}
[2026-05-30 05:05:08] 2026-05-30 03:04:19,933 | INFO     | --------------------------------------------------
[2026-05-30 05:05:08] 2026-05-30 03:04:19,933 | INFO     | 
[2026-05-30 05:05:08] 2026-05-30 03:04:19,933 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2026-05-30 05:05:08] 2026-05-30 03:04:20,422 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-30 05:05:08] 2026-05-30 03:04:20,423 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-30 05:05:08] 2026-05-30 03:04:20,423 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-30 05:05:08] 2026-05-30 03:04:20,423 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-30 05:05:08] 2026-05-30 03:04:20,423 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-30 05:05:08] 2026-05-30 03:04:20,423 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-30 05:05:08] 2026-05-30 03:04:20,423 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-30 05:05:08] 2026-05-30 03:04:20,423 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-30 05:05:08] 2026-05-30 03:04:20,423 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-30 05:05:08] 2026-05-30 03:04:20,423 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-30 05:05:08] 2026-05-30 03:04:20,424 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-30 05:05:08] 2026-05-30 03:04:20,424 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-30 05:05:08] 2026-05-30 03:04:20,424 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-30 05:05:08] 2026-05-30 03:04:20,424 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-30 05:05:08] 2026-05-30 03:04:20,424 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-30 05:05:08] 2026-05-30 03:04:20,424 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-30 05:05:08] 2026-05-30 03:04:20,424 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-30 05:05:08] 2026-05-30 03:04:20,424 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-30 05:05:08] 2026-05-30 03:04:20,424 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-30 05:05:08] 2026-05-30 03:04:20,425 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-30 05:05:08] 2026-05-30 03:04:20,425 | INFO     | job 7157456069 has completed (purged errors)
[2026-05-30 05:05:08] 2026-05-30 03:04:20,425 | INFO     | overall cleanup function is called
[2026-05-30 05:05:08] 2026-05-30 03:04:21,434 | INFO     | --- collectZombieJob: --- 10, [6390]
[2026-05-30 05:05:08] 2026-05-30 03:04:21,434 | INFO     | zombie collector waiting for pid 6390
[2026-05-30 05:05:08] 2026-05-30 03:04:21,434 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-30 05:05:08] 2026-05-30 03:04:21,434 | INFO     | collected zombie processes
[2026-05-30 05:05:08] 2026-05-30 03:04:21,434 | INFO     | will attempt to kill all subprocesses of pid=6390
[2026-05-30 05:05:08] 2026-05-30 03:04:21,498 | INFO     | process IDs to be killed: [6390] (in reverse order)
[2026-05-30 05:05:08] 2026-05-30 03:04:22,248 | WARNING  | found no corresponding commands to process id(s)
[2026-05-30 05:05:08] 2026-05-30 03:04:22,249 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-30 05:05:08] 2026-05-30 03:04:22,251 | INFO     | did not find any defunct processes belonging to 6390
[2026-05-30 05:05:08] 2026-05-30 03:04:22,252 | INFO     | did not find any defunct processes belonging to 6390
[2026-05-30 05:05:08] 2026-05-30 03:04:22,253 | INFO     | Ready for new job
[2026-05-30 05:05:08] 2026-05-30 03:04:22,255 | INFO     | ***************************************
[2026-05-30 05:05:08] 2026-05-30 03:04:22,255 | INFO     | ***  PanDA Pilot version 3.13.1.30  ***
[2026-05-30 05:05:08] 2026-05-30 03:04:22,255 | INFO     | ***************************************
[2026-05-30 05:05:08] 2026-05-30 03:04:22,255 | INFO     | 
[2026-05-30 05:05:08] 2026-05-30 03:04:22,256 | INFO     | pilot is running in a VM
[2026-05-30 05:05:08] 2026-05-30 03:04:22,256 | INFO     | architecture information:
[2026-05-30 05:05:08] 2026-05-30 03:04:22,256 | INFO     | executing command: cat /etc/os-release
[2026-05-30 05:05:08] 2026-05-30 03:04:22,563 | INFO     | cat /etc/os-release:
[2026-05-30 05:05:08] NAME="CentOS Linux"
[2026-05-30 05:05:08] VERSION="7 (Core)"
[2026-05-30 05:05:08] ID="centos"
[2026-05-30 05:05:08] ID_LIKE="rhel fedora"
[2026-05-30 05:05:08] VERSION_ID="7"
[2026-05-30 05:05:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-30 05:05:08] ANSI_COLOR="0;31"
[2026-05-30 05:05:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-30 05:05:08] HOME_URL="https://www.centos.org/"
[2026-05-30 05:05:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-30 05:05:08] 
[2026-05-30 05:05:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-30 05:05:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-30 05:05:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-30 05:05:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-30 05:05:08] 
[2026-05-30 05:05:08] 2026-05-30 03:04:22,563 | INFO     | ***************************************
[2026-05-30 05:05:08] 2026-05-30 03:04:23,067 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2026-05-30 05:05:08] 2026-05-30 03:04:23,381 | INFO     | sufficient remaining disk space (495255027712 B)
[2026-05-30 05:05:08] 2026-05-30 03:04:23,382 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-30 05:05:08] 2026-05-30 03:04:23,382 | INFO     | current server update state: UPDATING_FINAL
[2026-05-30 05:05:08] 2026-05-30 03:04:23,382 | INFO     | update_server=False
[2026-05-30 05:05:08] 2026-05-30 03:04:23,382 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-30 05:05:08] 2026-05-30 03:04:23,382 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-30 05:05:08] 2026-05-30 03:04:23,538 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-30 05:05:08] 2026-05-30 03:04:23,538 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-30 05:05:08] 2026-05-30 03:04:23,538 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-30 05:05:08] 2026-05-30 03:04:23,538 | INFO     | will abort loop
[2026-05-30 05:05:08] 2026-05-30 03:04:23,613 | INFO     | all job control threads have been joined
[2026-05-30 05:05:08] 2026-05-30 03:04:23,812 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-30 05:05:08] 2026-05-30 03:04:24,078 | INFO     | all data control threads have been joined
[2026-05-30 05:05:08] 2026-05-30 03:04:24,388 | INFO     | [job] retrieve thread has finished
[2026-05-30 05:05:08] 2026-05-30 03:04:24,544 | INFO     | [job] job monitor thread has finished
[2026-05-30 05:05:08] 2026-05-30 03:04:24,619 | INFO     | [job] control thread has finished
[2026-05-30 05:05:08] 2026-05-30 03:04:24,687 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-30 05:05:08] 2026-05-30 03:04:24,777 | INFO     | [payload] failed_post thread has finished
[2026-05-30 05:05:08] 2026-05-30 03:04:24,810 | INFO     | all payload control threads have been joined
[2026-05-30 05:05:08] 2026-05-30 03:04:24,864 | INFO     | [payload] validate_pre thread has finished
[2026-05-30 05:05:08] 2026-05-30 03:04:24,940 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-30 05:05:08] 2026-05-30 03:04:25,051 | INFO     | [payload] execute_payloads thread has finished
[2026-05-30 05:05:08] 2026-05-30 03:04:25,084 | INFO     | [data] control thread has finished
[2026-05-30 05:05:08] 2026-05-30 03:04:25,196 | INFO     | [job] create_data_payload thread has finished
[2026-05-30 05:05:08] 2026-05-30 03:04:25,389 | INFO     | [data] copytool_out thread has finished
[2026-05-30 05:05:08] 2026-05-30 03:04:25,398 | INFO     | [job] validate thread has finished
[2026-05-30 05:05:08] 2026-05-30 03:04:25,520 | INFO     | [data] copytool_in thread has finished
[2026-05-30 05:05:08] 2026-05-30 03:04:25,816 | INFO     | [payload] control thread has finished
[2026-05-30 05:05:08] 2026-05-30 03:04:25,890 | INFO     | [payload] validate_post thread has finished
[2026-05-30 05:05:08] 2026-05-30 03:04:25,946 | INFO     | [job] queue monitor thread has finished
[2026-05-30 05:05:08] 2026-05-30 03:04:27,821 | INFO     | [data] queue_monitor thread has finished
[2026-05-30 05:05:08] 2026-05-30 03:04:52,622 | INFO     | PID=1893 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-05-30 05:05:08] 2026-05-30 03:04:52,622 | INFO     | .. there are 2 such processes running
[2026-05-30 05:05:08] 2026-05-30 03:04:52,622 | INFO     | found 0 job(s) in 20 queues
[2026-05-30 05:05:08] 2026-05-30 03:04:52,623 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-30 05:05:08] 2026-05-30 03:04:52,623 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-30 05:05:08] 2026-05-30 03:04:57,785 | INFO     | [monitor] cgroup control has ended
[2026-05-30 05:05:08] 2026-05-30 03:04:57,846 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140017724790592)>', '<ExcThread(monitor, started 140016898516736)>']
[2026-05-30 05:05:08] 2026-05-30 03:04:58,659 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-30 05:05:08] 2026-05-30 03:04:58,659 | INFO     | [monitor] control thread has ended
[2026-05-30 05:05:08] 2026-05-30 03:05:02,872 | INFO     | all workflow threads have been joined
[2026-05-30 05:05:08] 2026-05-30 03:05:02,872 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-30 05:05:08] 2026-05-30 03:05:02,872 | INFO     | traces error code: 0
[2026-05-30 05:05:08] 2026-05-30 03:05:02,873 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-30 05:05:08] 2026-05-30 03:05:03,359 [wrapper] ==== pilot stdout END ====
[2026-05-30 05:05:08] 2026-05-30 03:05:03,481 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-30 05:05:08] 2026-05-30 03:05:03,568 [wrapper] pilotpid: 1893
[2026-05-30 05:05:08] 2026-05-30 03:05:03,676 [wrapper] Pilot exit status: 0
[2026-05-30 05:05:08] 2026-05-30 03:05:04,206 [wrapper] pandaids: 7157456069
[2026-05-30 05:05:08] 2026-05-30 03:05:05,376 [wrapper] cleanup supervisor_pilot 28024 1894
[2026-05-30 05:05:08] 2026-05-30 03:05:05,565 [wrapper] Test setup, not cleaning
[2026-05-30 05:05:08] 2026-05-30 03:05:05,670 [wrapper] apfmon messages muted
[2026-05-30 05:05:08] 2026-05-30 03:05:05,782 [wrapper] ==== wrapper stdout END ====
[2026-05-30 05:05:08] 2026-05-30 03:05:05,894 [wrapper] ==== wrapper stderr END ====
[2026-05-30 05:05:08]  *** Error codes and diagnostics ***
[2026-05-30 05:05:08]     "exeErrorCode": 0,
[2026-05-30 05:05:08]     "pilotErrorCode": 0,
[2026-05-30 05:05:08]  *** Listing of results directory ***
[2026-05-30 05:05:08] total 510240
[2026-05-30 05:05:08] -rw-r--r--. 1 boinc boinc    709501 May 29 05:03 pilot3.tar.gz
[2026-05-30 05:05:08] -rw-r--r--. 1 boinc boinc      5631 May 29 05:04 queuedata.json
[2026-05-30 05:05:08] -rwx------. 1 boinc boinc     36281 May 29 05:04 runpilot2-wrapper.sh
[2026-05-30 05:05:08] -rw-r--r--. 1 boinc boinc       100 May 30 01:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-30 05:05:08] -rwxr-xr-x. 1 boinc boinc      7986 May 30 01:01 run_atlas
[2026-05-30 05:05:08] -rw-r--r--. 1 boinc boinc       105 May 30 01:01 job.xml
[2026-05-30 05:05:08] -rw-r--r--. 2 boinc boinc 292832289 May 30 01:01 EVNT.50469837._000166.pool.root.1
[2026-05-30 05:05:08] -rw-r--r--. 2 boinc boinc    722731 May 30 01:01 input.tar.gz
[2026-05-30 05:05:08] -rw-r--r--. 1 boinc boinc      6307 May 30 01:01 init_data.xml
[2026-05-30 05:05:08] -rw-r--r--. 2 boinc boinc     15667 May 30 01:01 start_atlas.sh
[2026-05-30 05:05:08] drwxrwx--x. 2 boinc boinc        68 May 30 01:01 shared
[2026-05-30 05:05:08] -rw-r--r--. 1 boinc boinc         0 May 30 01:01 boinc_lockfile
[2026-05-30 05:05:08] -rw-r--r--. 1 boinc boinc      2513 May 30 01:02 pandaJob.out
[2026-05-30 05:05:08] -rw-------. 1 boinc boinc   1251485 May 30 01:06 cric_ddmendpoints.json
[2026-05-30 05:05:08] -rw-------. 1 boinc boinc       415 May 30 01:08 workernode_map.json
[2026-05-30 05:05:08] -rw-------. 1 boinc boinc    995587 May 30 01:08 agis_schedconf.cvmfs.json
[2026-05-30 05:05:08] drwx------. 5 boinc boinc      4096 May 30 01:08 pilot3
[2026-05-30 05:05:08] -rw-------. 1 boinc boinc 222314865 May 30 05:02 HITS.50533925._004134.pool.root.1
[2026-05-30 05:05:08] -rw-r--r--. 1 boinc boinc       489 May 30 05:02 boinc_task_state.xml
[2026-05-30 05:05:08] -rw-------. 1 boinc boinc        95 May 30 05:03 pilot_heartbeat.json
[2026-05-30 05:05:08] -rw-------. 1 boinc boinc      1024 May 30 05:04 memory_monitor_summary.json
[2026-05-30 05:05:08] -rw-------. 1 boinc boinc         0 May 30 05:04 agis_ddmendpoints.agis.ALL.json
[2026-05-30 05:05:08] -rw-------. 1 boinc boinc    387603 May 30 05:04 log.50533925._004134.job.log.tgz.1
[2026-05-30 05:05:08] -rw-------. 1 boinc boinc      6396 May 30 05:04 heartbeat_new.json
[2026-05-30 05:05:08] -rw-------. 1 boinc boinc      6287 May 30 05:04 heartbeat.json
[2026-05-30 05:05:08] -rw-r--r--. 1 boinc boinc      8192 May 30 05:04 boinc_mmap_file
[2026-05-30 05:05:08] -rw-r--r--. 1 boinc boinc        28 May 30 05:04 wrapper_checkpoint.txt
[2026-05-30 05:05:08] -rw-------. 1 boinc boinc      5069 May 30 05:05 pilotlog.txt
[2026-05-30 05:05:08] -rw-------. 1 boinc boinc   1320410 May 30 05:05 log.50533925._004134.job.log.1
[2026-05-30 05:05:08] -rw-------. 1 boinc boinc       357 May 30 05:05 output.list
[2026-05-30 05:05:08] -rw-r--r--. 1 boinc boinc       410 May 30 05:05 runtime_log
[2026-05-30 05:05:08] -rw-------. 1 boinc boinc   1730560 May 30 05:05 result.tar.gz
[2026-05-30 05:05:08] -rw-r--r--. 1 boinc boinc      8455 May 30 05:05 runtime_log.err
[2026-05-30 05:05:08] -rw-------. 1 boinc boinc       656 May 30 05:05 022fcd60e43e.diag
[2026-05-30 05:05:08] -rw-r--r--. 1 boinc boinc     20570 May 30 05:05 stderr.txt
[2026-05-30 05:05:08] HITS file was successfully produced:
[2026-05-30 05:05:08] -rw-------. 1 boinc boinc 222314865 May 30 05:02 shared/HITS.pool.root.1
[2026-05-30 05:05:08]  *** Contents of shared directory: ***
[2026-05-30 05:05:08] total 505496
[2026-05-30 05:05:08] -rw-r--r--. 2 boinc boinc 292832289 May 30 01:01 ATLAS.root_0
[2026-05-30 05:05:08] -rw-r--r--. 2 boinc boinc    722731 May 30 01:01 input.tar.gz
[2026-05-30 05:05:08] -rw-r--r--. 2 boinc boinc     15667 May 30 01:01 start_atlas.sh
[2026-05-30 05:05:08] -rw-------. 1 boinc boinc 222314865 May 30 05:02 HITS.pool.root.1
[2026-05-30 05:05:08] -rw-------. 1 boinc boinc   1730560 May 30 05:05 result.tar.gz
05:05:09 (30311): run_atlas exited; CPU time 65594.502197
05:05:09 (30311): called boinc_finish(0)

</stderr_txt>
]]>

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