Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:36:13 (1271): wrapper (7.7.26015): starting
22:36:13 (1271): wrapper: running run_atlas (--nthreads 8)
[2026-05-29 22:36:13] Arguments: --nthreads 8
[2026-05-29 22:36:13] Threads: 8
[2026-05-29 22:36:13] Checking for CVMFS
[2026-05-29 22:36:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-29 22:36:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-29 22:36:18] Running cvmfs_config stat atlas.cern.ch
[2026-05-29 22:36:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-29 22:36:20] 2.11.2.0 3154 63606 137372 159943 0 53 13456609 25165825 96 130560 0 31890104 99.887 11131539 6664 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-29 22:36:20] CVMFS is ok
[2026-05-29 22:36:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-29 22:36:20] Checking for apptainer binary...
[2026-05-29 22:36:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-29 22:36:20] Running /usr/bin/apptainer --version
[2026-05-29 22:36:20] apptainer version 1.3.2-1.el7
[2026-05-29 22:36:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-29 22:36:37] cg-vwn215.simple-grid.lan
[2026-05-29 22:36:37] apptainer works
[2026-05-29 22:36:37] Set ATHENA_PROC_NUMBER=8
[2026-05-29 22:36:37] Set ATHENA_CORE_NUMBER=8
[2026-05-29 22:36:38] Starting ATLAS job with PandaID=7157455622
[2026-05-29 22:36:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-30 03:39:43]  *** The last 200 lines of the pilot log: ***
[2026-05-30 03:39:43] 2026-05-30 01:38:34,894 | INFO     | fitting pss+swap vs Time
[2026-05-30 03:39:43] 2026-05-30 01:38:34,895 | INFO     | sum of square deviations: 7178069470.0
[2026-05-30 03:39:43] 2026-05-30 01:38:34,898 | INFO     | sum of deviations: 215997377758.99997
[2026-05-30 03:39:43] 2026-05-30 01:38:34,898 | INFO     | mean x (centered): 0.0
[2026-05-30 03:39:43] 2026-05-30 01:38:34,898 | INFO     | mean y: 2437745.305263158
[2026-05-30 03:39:43] 2026-05-30 01:38:34,899 | INFO     | intersect: 2437745.305263158
[2026-05-30 03:39:43] 2026-05-30 01:38:34,899 | INFO     | chi2: 11.076366475050238
[2026-05-30 03:39:43] 2026-05-30 01:38:34,900 | INFO     | sum of square deviations: 6806862510.0
[2026-05-30 03:39:43] 2026-05-30 01:38:34,902 | INFO     | sum of deviations: 230690751996.5
[2026-05-30 03:39:43] 2026-05-30 01:38:34,903 | INFO     | mean x (centered): 0.0
[2026-05-30 03:39:43] 2026-05-30 01:38:34,903 | INFO     | mean y: 2443668.725
[2026-05-30 03:39:43] 2026-05-30 01:38:34,903 | INFO     | intersect: 2443668.725
[2026-05-30 03:39:43] 2026-05-30 01:38:34,904 | INFO     | chi2: 10.391454605265885
[2026-05-30 03:39:43] 2026-05-30 01:38:34,904 | INFO     | current chi2=10.391454605265885 (change=6.18354287326202 %)
[2026-05-30 03:39:43] 2026-05-30 01:38:34,904 | INFO     | right removable region: 279
[2026-05-30 03:39:43] 2026-05-30 01:38:34,904 | INFO     | sum of square deviations: 6806862510.0
[2026-05-30 03:39:43] 2026-05-30 01:38:34,907 | INFO     | sum of deviations: 110585905181.5
[2026-05-30 03:39:43] 2026-05-30 01:38:34,907 | INFO     | mean x (centered): 0.0
[2026-05-30 03:39:43] 2026-05-30 01:38:34,907 | INFO     | mean y: 2481053.189285714
[2026-05-30 03:39:43] 2026-05-30 01:38:34,908 | INFO     | intersect: 2481053.189285714
[2026-05-30 03:39:43] 2026-05-30 01:38:34,908 | INFO     | chi2: 5.306591756215129
[2026-05-30 03:39:43] 2026-05-30 01:38:34,908 | INFO     | current chi2=5.306591756215129 (change=52.09086149173247 %)
[2026-05-30 03:39:43] 2026-05-30 01:38:34,909 | INFO     | sum of square deviations: 6448679050.0
[2026-05-30 03:39:43] 2026-05-30 01:38:34,911 | INFO     | sum of deviations: 21687541974.99997
[2026-05-30 03:39:43] 2026-05-30 01:38:34,912 | INFO     | mean x (centered): 0.0
[2026-05-30 03:39:43] 2026-05-30 01:38:34,912 | INFO     | mean y: 2518876.130909091
[2026-05-30 03:39:43] 2026-05-30 01:38:34,912 | INFO     | intersect: 2518876.130909091
[2026-05-30 03:39:43] 2026-05-30 01:38:34,912 | INFO     | chi2: 1.5612693134015863
[2026-05-30 03:39:43] 2026-05-30 01:38:34,913 | INFO     | current chi2=1.5612693134015863 (change=70.57868053307449 %)
[2026-05-30 03:39:43] 2026-05-30 01:38:34,913 | INFO     | sum of square deviations: 6103286527.5
[2026-05-30 03:39:43] 2026-05-30 01:38:34,916 | INFO     | sum of deviations: -10574475477.0
[2026-05-30 03:39:43] 2026-05-30 01:38:34,916 | INFO     | mean x (centered): 0.0
[2026-05-30 03:39:43] 2026-05-30 01:38:34,916 | INFO     | mean y: 2533017.644444444
[2026-05-30 03:39:43] 2026-05-30 01:38:34,916 | INFO     | intersect: 2533017.644444444
[2026-05-30 03:39:43] 2026-05-30 01:38:34,917 | INFO     | chi2: 0.8521578477474558
[2026-05-30 03:39:43] 2026-05-30 01:38:34,917 | INFO     | current chi2=0.8521578477474558 (change=45.418907523979136 %)
[2026-05-30 03:39:43] 2026-05-30 01:38:34,917 | INFO     | sum of square deviations: 5770452380.0
[2026-05-30 03:39:43] 2026-05-30 01:38:34,920 | INFO     | sum of deviations: -7655383855.999998
[2026-05-30 03:39:43] 2026-05-30 01:38:34,920 | INFO     | mean x (centered): 0.0
[2026-05-30 03:39:43] 2026-05-30 01:38:34,920 | INFO     | mean y: 2531653.7018867927
[2026-05-30 03:39:43] 2026-05-30 01:38:34,920 | INFO     | intersect: 2531653.7018867927
[2026-05-30 03:39:43] 2026-05-30 01:38:34,921 | INFO     | chi2: 0.8310655512189403
[2026-05-30 03:39:43] 2026-05-30 01:38:34,921 | INFO     | current chi2=0.8310655512189403 (change=2.475163091470631 %)
[2026-05-30 03:39:43] 2026-05-30 01:38:34,921 | INFO     | left removable region: 20
[2026-05-30 03:39:43] 2026-05-30 01:38:34,921 | INFO     | sum of square deviations: 5387301010.0
[2026-05-30 03:39:43] 2026-05-30 01:38:34,924 | INFO     | sum of deviations: 9672256989.999998
[2026-05-30 03:39:43] 2026-05-30 01:38:34,924 | INFO     | mean x (centered): 0.0
[2026-05-30 03:39:43] 2026-05-30 01:38:34,924 | INFO     | mean y: 2539766.111969112
[2026-05-30 03:39:43] 2026-05-30 01:38:34,924 | INFO     | intersect: 2539766.111969112
[2026-05-30 03:39:43] 2026-05-30 01:38:34,925 | INFO     | chi2: 0.038892728304458266
[2026-05-30 03:39:43] 2026-05-30 01:38:34,925 | INFO     | current memory leak: 1.80 B/s (using 259 data points, chi2=0.04)
[2026-05-30 03:39:43] 2026-05-30 01:38:34,926 | INFO     | could have reported an average CPU frequency of 2000 MHz (13 samples)
[2026-05-30 03:39:43] 2026-05-30 01:38:34,926 | INFO     | ..............................
[2026-05-30 03:39:43] 2026-05-30 01:38:34,927 | INFO     | . Timing measurements:
[2026-05-30 03:39:43] 2026-05-30 01:38:34,927 | INFO     | . get job = 0 s
[2026-05-30 03:39:43] 2026-05-30 01:38:34,927 | INFO     | . initial setup = 119 s
[2026-05-30 03:39:43] 2026-05-30 01:38:34,927 | INFO     | . payload setup = 193 s
[2026-05-30 03:39:43] 2026-05-30 01:38:34,927 | INFO     | . stage-in = 0 s
[2026-05-30 03:39:43] 2026-05-30 01:38:34,927 | INFO     | . payload execution = 17518 s
[2026-05-30 03:39:43] 2026-05-30 01:38:34,927 | INFO     | . stage-out = 3 s
[2026-05-30 03:39:43] 2026-05-30 01:38:34,927 | INFO     | . log creation = 1 s
[2026-05-30 03:39:43] 2026-05-30 01:38:34,927 | INFO     | ..............................
[2026-05-30 03:39:43] 2026-05-30 01:38:35,512 | INFO     | 
[2026-05-30 03:39:43] 2026-05-30 01:38:35,512 | INFO     | job summary report
[2026-05-30 03:39:43] 2026-05-30 01:38:35,512 | INFO     | --------------------------------------------------
[2026-05-30 03:39:43] 2026-05-30 01:38:35,512 | INFO     | PanDA job id: 7157455622
[2026-05-30 03:39:43] 2026-05-30 01:38:35,512 | INFO     | task id: 50533925
[2026-05-30 03:39:43] 2026-05-30 01:38:35,512 | INFO     | errors: (none)
[2026-05-30 03:39:43] 2026-05-30 01:38:35,512 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-30 03:39:43] 2026-05-30 01:38:35,513 | INFO     | pilot state: finished 
[2026-05-30 03:39:43] 2026-05-30 01:38:35,513 | INFO     | transexitcode: 0
[2026-05-30 03:39:43] 2026-05-30 01:38:35,513 | INFO     | exeerrorcode: 0
[2026-05-30 03:39:43] 2026-05-30 01:38:35,513 | INFO     | exeerrordiag: 
[2026-05-30 03:39:43] 2026-05-30 01:38:35,513 | INFO     | exitcode: 0
[2026-05-30 03:39:43] 2026-05-30 01:38:35,513 | INFO     | exitmsg: OK
[2026-05-30 03:39:43] 2026-05-30 01:38:35,513 | INFO     | cpuconsumptiontime: 65740 s
[2026-05-30 03:39:43] 2026-05-30 01:38:35,513 | INFO     | nevents: 400
[2026-05-30 03:39:43] 2026-05-30 01:38:35,513 | INFO     | neventsw: 0
[2026-05-30 03:39:43] 2026-05-30 01:38:35,513 | INFO     | pid: 9772
[2026-05-30 03:39:43] 2026-05-30 01:38:35,514 | INFO     | pgrp: 9772
[2026-05-30 03:39:43] 2026-05-30 01:38:35,514 | INFO     | corecount: 8
[2026-05-30 03:39:43] 2026-05-30 01:38:35,514 | INFO     | event service: False
[2026-05-30 03:39:43] 2026-05-30 01:38:35,514 | INFO     | sizes: {0: 2265102, 1: 2266015, 2: 2267589, 13: 2267617, 17715: 2299847, 17718: 2308847, 17721: 2309225}
[2026-05-30 03:39:43] 2026-05-30 01:38:35,514 | INFO     | --------------------------------------------------
[2026-05-30 03:39:43] 2026-05-30 01:38:35,514 | INFO     | 
[2026-05-30 03:39:43] 2026-05-30 01:38:35,514 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2026-05-30 03:39:43] 2026-05-30 01:38:35,954 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-30 03:39:43] 2026-05-30 01:38:35,955 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-30 03:39:43] 2026-05-30 01:38:35,955 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-30 03:39:43] 2026-05-30 01:38:35,955 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-30 03:39:43] 2026-05-30 01:38:35,955 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-30 03:39:43] 2026-05-30 01:38:35,955 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-30 03:39:43] 2026-05-30 01:38:35,955 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-30 03:39:43] 2026-05-30 01:38:35,955 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-30 03:39:43] 2026-05-30 01:38:35,955 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-30 03:39:43] 2026-05-30 01:38:35,955 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-30 03:39:43] 2026-05-30 01:38:35,956 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-30 03:39:43] 2026-05-30 01:38:35,956 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-30 03:39:43] 2026-05-30 01:38:35,956 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-30 03:39:43] 2026-05-30 01:38:35,956 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-30 03:39:43] 2026-05-30 01:38:35,956 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-30 03:39:43] 2026-05-30 01:38:35,956 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-30 03:39:43] 2026-05-30 01:38:35,956 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-30 03:39:43] 2026-05-30 01:38:35,956 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-30 03:39:43] 2026-05-30 01:38:35,956 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-30 03:39:43] 2026-05-30 01:38:35,957 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-30 03:39:43] 2026-05-30 01:38:35,957 | INFO     | job 7157455622 has completed (purged errors)
[2026-05-30 03:39:43] 2026-05-30 01:38:35,957 | INFO     | overall cleanup function is called
[2026-05-30 03:39:43] 2026-05-30 01:38:36,966 | INFO     | --- collectZombieJob: --- 10, [9772]
[2026-05-30 03:39:43] 2026-05-30 01:38:36,966 | INFO     | zombie collector waiting for pid 9772
[2026-05-30 03:39:43] 2026-05-30 01:38:36,966 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-30 03:39:43] 2026-05-30 01:38:36,966 | INFO     | collected zombie processes
[2026-05-30 03:39:43] 2026-05-30 01:38:36,966 | INFO     | will attempt to kill all subprocesses of pid=9772
[2026-05-30 03:39:43] 2026-05-30 01:38:37,036 | INFO     | process IDs to be killed: [9772] (in reverse order)
[2026-05-30 03:39:43] 2026-05-30 01:38:37,774 | WARNING  | found no corresponding commands to process id(s)
[2026-05-30 03:39:43] 2026-05-30 01:38:37,775 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-30 03:39:43] 2026-05-30 01:38:37,777 | INFO     | did not find any defunct processes belonging to 9772
[2026-05-30 03:39:43] 2026-05-30 01:38:37,778 | INFO     | did not find any defunct processes belonging to 9772
[2026-05-30 03:39:43] 2026-05-30 01:38:37,779 | INFO     | Ready for new job
[2026-05-30 03:39:43] 2026-05-30 01:38:37,781 | INFO     | ***************************************
[2026-05-30 03:39:43] 2026-05-30 01:38:37,781 | INFO     | ***  PanDA Pilot version 3.13.1.30  ***
[2026-05-30 03:39:43] 2026-05-30 01:38:37,781 | INFO     | ***************************************
[2026-05-30 03:39:43] 2026-05-30 01:38:37,781 | INFO     | 
[2026-05-30 03:39:43] 2026-05-30 01:38:37,782 | INFO     | pilot is running in a VM
[2026-05-30 03:39:43] 2026-05-30 01:38:37,782 | INFO     | architecture information:
[2026-05-30 03:39:43] 2026-05-30 01:38:37,801 | INFO     | executing command: cat /etc/os-release
[2026-05-30 03:39:43] 2026-05-30 01:38:38,082 | INFO     | cat /etc/os-release:
[2026-05-30 03:39:43] NAME="CentOS Linux"
[2026-05-30 03:39:43] VERSION="7 (Core)"
[2026-05-30 03:39:43] ID="centos"
[2026-05-30 03:39:43] ID_LIKE="rhel fedora"
[2026-05-30 03:39:43] VERSION_ID="7"
[2026-05-30 03:39:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-30 03:39:43] ANSI_COLOR="0;31"
[2026-05-30 03:39:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-30 03:39:43] HOME_URL="https://www.centos.org/"
[2026-05-30 03:39:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-30 03:39:43] 
[2026-05-30 03:39:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-30 03:39:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-30 03:39:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-30 03:39:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-30 03:39:43] 
[2026-05-30 03:39:43] 2026-05-30 01:38:38,083 | INFO     | ***************************************
[2026-05-30 03:39:43] 2026-05-30 01:38:38,586 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2026-05-30 03:39:43] 2026-05-30 01:38:38,785 | INFO     | sufficient remaining disk space (496878223360 B)
[2026-05-30 03:39:43] 2026-05-30 01:38:38,786 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-30 03:39:43] 2026-05-30 01:38:38,786 | INFO     | current server update state: UPDATING_FINAL
[2026-05-30 03:39:43] 2026-05-30 01:38:38,786 | INFO     | update_server=False
[2026-05-30 03:39:43] 2026-05-30 01:38:38,786 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-30 03:39:43] 2026-05-30 01:38:38,791 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-30 03:39:43] 2026-05-30 01:38:39,134 | INFO     | all job control threads have been joined
[2026-05-30 03:39:43] 2026-05-30 01:38:39,164 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-30 03:39:43] 2026-05-30 01:38:39,164 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-30 03:39:43] 2026-05-30 01:38:39,164 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-30 03:39:43] 2026-05-30 01:38:39,164 | INFO     | will abort loop
[2026-05-30 03:39:43] 2026-05-30 01:38:39,598 | INFO     | all data control threads have been joined
[2026-05-30 03:39:43] 2026-05-30 01:38:39,660 | INFO     | all payload control threads have been joined
[2026-05-30 03:39:43] 2026-05-30 01:38:39,795 | INFO     | [job] retrieve thread has finished
[2026-05-30 03:39:43] 2026-05-30 01:38:40,061 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-30 03:39:43] 2026-05-30 01:38:40,140 | INFO     | [job] control thread has finished
[2026-05-30 03:39:43] 2026-05-30 01:38:40,170 | INFO     | [job] job monitor thread has finished
[2026-05-30 03:39:43] 2026-05-30 01:38:40,306 | INFO     | [job] create_data_payload thread has finished
[2026-05-30 03:39:43] 2026-05-30 01:38:40,530 | INFO     | [data] copytool_in thread has finished
[2026-05-30 03:39:43] 2026-05-30 01:38:40,553 | INFO     | [payload] execute_payloads thread has finished
[2026-05-30 03:39:43] 2026-05-30 01:38:40,604 | INFO     | [data] control thread has finished
[2026-05-30 03:39:43] 2026-05-30 01:38:40,606 | INFO     | [payload] failed_post thread has finished
[2026-05-30 03:39:43] 2026-05-30 01:38:40,666 | INFO     | [payload] control thread has finished
[2026-05-30 03:39:43] 2026-05-30 01:38:40,798 | INFO     | [data] copytool_out thread has finished
[2026-05-30 03:39:43] 2026-05-30 01:38:40,871 | INFO     | [job] validate thread has finished
[2026-05-30 03:39:43] 2026-05-30 01:38:40,896 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-30 03:39:43] 2026-05-30 01:38:41,008 | INFO     | [payload] validate_pre thread has finished
[2026-05-30 03:39:43] 2026-05-30 01:38:41,067 | INFO     | [job] queue monitor thread has finished
[2026-05-30 03:39:43] 2026-05-30 01:38:41,382 | INFO     | [payload] validate_post thread has finished
[2026-05-30 03:39:43] 2026-05-30 01:38:44,905 | INFO     | [data] queue_monitor thread has finished
[2026-05-30 03:39:43] 2026-05-30 01:38:49,703 | INFO     | job.realtimelogging is not enabled
[2026-05-30 03:39:43] 2026-05-30 01:38:50,712 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-30 03:39:43] 2026-05-30 01:39:08,381 | INFO     | PID=5321 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-05-30 03:39:43] 2026-05-30 01:39:08,381 | INFO     | .. there are 2 such processes running
[2026-05-30 03:39:43] 2026-05-30 01:39:08,381 | INFO     | found 0 job(s) in 20 queues
[2026-05-30 03:39:43] 2026-05-30 01:39:08,382 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-30 03:39:43] 2026-05-30 01:39:08,382 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-30 03:39:43] 2026-05-30 01:39:30,516 | INFO     | [monitor] cgroup control has ended
[2026-05-30 03:39:43] 2026-05-30 01:39:32,440 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140290920007488)>', '<ExcThread(monitor, started 140290627180288)>']
[2026-05-30 03:39:43] 2026-05-30 01:39:32,526 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-30 03:39:43] 2026-05-30 01:39:32,526 | INFO     | [monitor] control thread has ended
[2026-05-30 03:39:43] 2026-05-30 01:39:37,466 | INFO     | all workflow threads have been joined
[2026-05-30 03:39:43] 2026-05-30 01:39:37,466 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-30 03:39:43] 2026-05-30 01:39:37,466 | INFO     | traces error code: 0
[2026-05-30 03:39:43] 2026-05-30 01:39:37,467 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-30 03:39:43] 2026-05-30 01:39:38,002 [wrapper] ==== pilot stdout END ====
[2026-05-30 03:39:43] 2026-05-30 01:39:38,116 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-30 03:39:43] 2026-05-30 01:39:38,258 [wrapper] pilotpid: 5321
[2026-05-30 03:39:43] 2026-05-30 01:39:38,363 [wrapper] Pilot exit status: 0
[2026-05-30 03:39:43] 2026-05-30 01:39:38,920 [wrapper] pandaids: 7157455622
[2026-05-30 03:39:43] 2026-05-30 01:39:40,143 [wrapper] cleanup supervisor_pilot 17284 5322
[2026-05-30 03:39:43] 2026-05-30 01:39:40,245 [wrapper] Test setup, not cleaning
[2026-05-30 03:39:43] 2026-05-30 01:39:40,318 [wrapper] apfmon messages muted
[2026-05-30 03:39:43] 2026-05-30 01:39:40,420 [wrapper] ==== wrapper stdout END ====
[2026-05-30 03:39:43] 2026-05-30 01:39:40,538 [wrapper] ==== wrapper stderr END ====
[2026-05-30 03:39:43]  *** Error codes and diagnostics ***
[2026-05-30 03:39:43]     "exeErrorCode": 0,
[2026-05-30 03:39:43]     "pilotErrorCode": 0,
[2026-05-30 03:39:43]  *** Listing of results directory ***
[2026-05-30 03:39:43] total 515972
[2026-05-30 03:39:43] -rw-r--r--. 1 boinc boinc    709501 May 29 05:03 pilot3.tar.gz
[2026-05-30 03:39:43] -rw-r--r--. 1 boinc boinc      5631 May 29 05:04 queuedata.json
[2026-05-30 03:39:43] -rwx------. 1 boinc boinc     36281 May 29 05:04 runpilot2-wrapper.sh
[2026-05-30 03:39:43] -rw-r--r--. 1 boinc boinc       100 May 29 22:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-30 03:39:43] -rwxr-xr-x. 1 boinc boinc      7986 May 29 22:36 run_atlas
[2026-05-30 03:39:43] -rw-r--r--. 1 boinc boinc       105 May 29 22:36 job.xml
[2026-05-30 03:39:43] -rw-r--r--. 2 boinc boinc 293026389 May 29 22:36 EVNT.50469837._000160.pool.root.1
[2026-05-30 03:39:43] -rw-r--r--. 1 boinc boinc      6308 May 29 22:36 init_data.xml
[2026-05-30 03:39:43] -rw-r--r--. 2 boinc boinc     15667 May 29 22:36 start_atlas.sh
[2026-05-30 03:39:43] drwxrwx--x. 2 boinc boinc        68 May 29 22:36 shared
[2026-05-30 03:39:43] -rw-r--r--. 2 boinc boinc    722730 May 29 22:36 input.tar.gz
[2026-05-30 03:39:43] -rw-r--r--. 1 boinc boinc         0 May 29 22:36 boinc_lockfile
[2026-05-30 03:39:43] -rw-r--r--. 1 boinc boinc      2513 May 29 22:36 pandaJob.out
[2026-05-30 03:39:43] -rw-------. 1 boinc boinc   1251485 May 29 22:41 cric_ddmendpoints.json
[2026-05-30 03:39:43] -rw-------. 1 boinc boinc       413 May 29 22:42 workernode_map.json
[2026-05-30 03:39:43] -rw-------. 1 boinc boinc    995587 May 29 22:43 agis_schedconf.cvmfs.json
[2026-05-30 03:39:43] drwx------. 5 boinc boinc      4096 May 29 22:43 pilot3
[2026-05-30 03:39:43] -rw-------. 1 boinc boinc 227274894 May 30 03:37 HITS.50533925._003987.pool.root.1
[2026-05-30 03:39:43] -rw-r--r--. 1 boinc boinc       489 May 30 03:37 boinc_task_state.xml
[2026-05-30 03:39:43] -rw-------. 1 boinc boinc        95 May 30 03:38 pilot_heartbeat.json
[2026-05-30 03:39:43] -rw-------. 1 boinc boinc      1011 May 30 03:38 memory_monitor_summary.json
[2026-05-30 03:39:43] -rw-------. 1 boinc boinc         0 May 30 03:38 agis_ddmendpoints.agis.ALL.json
[2026-05-30 03:39:43] -rw-------. 1 boinc boinc    425619 May 30 03:38 log.50533925._003987.job.log.tgz.1
[2026-05-30 03:39:43] -rw-------. 1 boinc boinc      6376 May 30 03:38 heartbeat_new.json
[2026-05-30 03:39:43] -rw-------. 1 boinc boinc      6267 May 30 03:38 heartbeat.json
[2026-05-30 03:39:43] -rw-r--r--. 1 boinc boinc      8192 May 30 03:39 boinc_mmap_file
[2026-05-30 03:39:43] -rw-r--r--. 1 boinc boinc        28 May 30 03:39 wrapper_checkpoint.txt
[2026-05-30 03:39:43] -rw-------. 1 boinc boinc      5141 May 30 03:39 pilotlog.txt
[2026-05-30 03:39:43] -rw-------. 1 boinc boinc   1650438 May 30 03:39 log.50533925._003987.job.log.1
[2026-05-30 03:39:43] -rw-------. 1 boinc boinc       357 May 30 03:39 output.list
[2026-05-30 03:39:43] -rw-r--r--. 1 boinc boinc       410 May 30 03:39 runtime_log
[2026-05-30 03:39:43] -rw-------. 1 boinc boinc   2088960 May 30 03:39 result.tar.gz
[2026-05-30 03:39:43] -rw-r--r--. 1 boinc boinc      8455 May 30 03:39 runtime_log.err
[2026-05-30 03:39:43] -rw-------. 1 boinc boinc       656 May 30 03:39 022e366b271d.diag
[2026-05-30 03:39:43] -rw-r--r--. 1 boinc boinc     20446 May 30 03:39 stderr.txt
[2026-05-30 03:39:43] HITS file was successfully produced:
[2026-05-30 03:39:43] -rw-------. 1 boinc boinc 227274894 May 30 03:37 shared/HITS.pool.root.1
[2026-05-30 03:39:43]  *** Contents of shared directory: ***
[2026-05-30 03:39:43] total 510876
[2026-05-30 03:39:43] -rw-r--r--. 2 boinc boinc 293026389 May 29 22:36 ATLAS.root_0
[2026-05-30 03:39:43] -rw-r--r--. 2 boinc boinc     15667 May 29 22:36 start_atlas.sh
[2026-05-30 03:39:43] -rw-r--r--. 2 boinc boinc    722730 May 29 22:36 input.tar.gz
[2026-05-30 03:39:43] -rw-------. 1 boinc boinc 227274894 May 30 03:37 HITS.pool.root.1
[2026-05-30 03:39:43] -rw-------. 1 boinc boinc   2088960 May 30 03:39 result.tar.gz
03:39:44 (1271): run_atlas exited; CPU time 65904.163903
03:39:44 (1271): called boinc_finish(0)

</stderr_txt>
]]>

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