Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:15:17 (16685): wrapper (7.7.26015): starting
19:15:17 (16685): wrapper: running run_atlas (--nthreads 8)
[2026-05-29 19:15:17] Arguments: --nthreads 8
[2026-05-29 19:15:17] Threads: 8
[2026-05-29 19:15:17] Checking for CVMFS
[2026-05-29 19:15:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-29 19:15:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-29 19:15:18] Running cvmfs_config stat atlas.cern.ch
[2026-05-29 19:15:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-29 19:15:18] 2.11.2.0 30309 63386 105524 159938 0 131 22250378 25165824 96 130560 0 26588202 99.898 15184934 12067 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-29 19:15:18] CVMFS is ok
[2026-05-29 19:15:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-29 19:15:18] Checking for apptainer binary...
[2026-05-29 19:15:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-29 19:15:18] Running /usr/bin/apptainer --version
[2026-05-29 19:15:18] apptainer version 1.3.2-1.el7
[2026-05-29 19:15:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-29 19:15:20] cg-vwn233.simple-grid.lan
[2026-05-29 19:15:20] apptainer works
[2026-05-29 19:15:20] Set ATHENA_PROC_NUMBER=8
[2026-05-29 19:15:20] Set ATHENA_CORE_NUMBER=8
[2026-05-29 19:15:20] Starting ATLAS job with PandaID=7157453507
[2026-05-29 19:15:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-29 23:54:27]  *** The last 200 lines of the pilot log: ***
[2026-05-29 23:54:27] 2026-05-29 21:53:43,900 | INFO     | job 7157453507 has finished - writing final server update
[2026-05-29 23:54:27] 2026-05-29 21:53:43,901 | INFO     | total number of processed events: 400 (read)
[2026-05-29 23:54:27] 2026-05-29 21:53:43,903 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7157453507/memory_monitor_summary.json (trf name=prmon)
[2026-05-29 23:54:27] 2026-05-29 21:53:43,903 | INFO     | extracted standard info from prmon json
[2026-05-29 23:54:27] 2026-05-29 21:53:43,904 | INFO     | extracted standard memory fields from prmon json
[2026-05-29 23:54:27] 2026-05-29 21:53:43,904 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-29 23:54:27] 2026-05-29 21:53:43,904 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-29 23:54:27] 2026-05-29 21:53:43,910 | INFO     | fitting pss+swap vs Time
[2026-05-29 23:54:27] 2026-05-29 21:53:43,911 | INFO     | sum of square deviations: 6309000152.0
[2026-05-29 23:54:27] 2026-05-29 21:53:43,913 | INFO     | sum of deviations: -47913911804.0
[2026-05-29 23:54:27] 2026-05-29 21:53:43,914 | INFO     | mean x (centered): 0.0
[2026-05-29 23:54:27] 2026-05-29 21:53:43,914 | INFO     | mean y: 2563466.6263736263
[2026-05-29 23:54:27] 2026-05-29 21:53:43,914 | INFO     | intersect: 2563466.6263736263
[2026-05-29 23:54:27] 2026-05-29 21:53:43,914 | INFO     | chi2: 2.6543297057577884
[2026-05-29 23:54:27] 2026-05-29 21:53:43,915 | INFO     | sum of square deviations: 5968658887.0
[2026-05-29 23:54:27] 2026-05-29 21:53:43,917 | INFO     | sum of deviations: -28423437329.0
[2026-05-29 23:54:27] 2026-05-29 21:53:43,918 | INFO     | mean x (centered): 0.0
[2026-05-29 23:54:27] 2026-05-29 21:53:43,918 | INFO     | mean y: 2572077.649253731
[2026-05-29 23:54:27] 2026-05-29 21:53:43,918 | INFO     | intersect: 2572077.649253731
[2026-05-29 23:54:27] 2026-05-29 21:53:43,918 | INFO     | chi2: 1.8878969647196198
[2026-05-29 23:54:27] 2026-05-29 21:53:43,919 | INFO     | current chi2=1.8878969647196198 (change=28.87481307900891 %)
[2026-05-29 23:54:27] 2026-05-29 21:53:43,919 | INFO     | sum of square deviations: 5640782972.0
[2026-05-29 23:54:27] 2026-05-29 21:53:43,922 | INFO     | sum of deviations: -27643860806.00002
[2026-05-29 23:54:27] 2026-05-29 21:53:43,922 | INFO     | mean x (centered): 0.0
[2026-05-29 23:54:27] 2026-05-29 21:53:43,922 | INFO     | mean y: 2572440.2851711027
[2026-05-29 23:54:27] 2026-05-29 21:53:43,922 | INFO     | intersect: 2572440.2851711027
[2026-05-29 23:54:27] 2026-05-29 21:53:43,923 | INFO     | chi2: 1.8866142811924371
[2026-05-29 23:54:27] 2026-05-29 21:53:43,923 | INFO     | current chi2=1.8866142811924371 (change=0.06794245401910134 %)
[2026-05-29 23:54:27] 2026-05-29 21:53:43,923 | INFO     | right removable region: 262
[2026-05-29 23:54:27] 2026-05-29 21:53:43,923 | INFO     | sum of square deviations: 5968658887.0
[2026-05-29 23:54:27] 2026-05-29 21:53:43,926 | INFO     | sum of deviations: -93623362663.99998
[2026-05-29 23:54:27] 2026-05-29 21:53:43,926 | INFO     | mean x (centered): 0.0
[2026-05-29 23:54:27] 2026-05-29 21:53:43,926 | INFO     | mean y: 2583790.552238806
[2026-05-29 23:54:27] 2026-05-29 21:53:43,927 | INFO     | intersect: 2583790.552238806
[2026-05-29 23:54:27] 2026-05-29 21:53:43,927 | INFO     | chi2: 1.0725893337988075
[2026-05-29 23:54:27] 2026-05-29 21:53:43,927 | INFO     | current chi2=1.0725893337988075 (change=59.59095317088378 %)
[2026-05-29 23:54:27] 2026-05-29 21:53:43,928 | INFO     | sum of square deviations: 5640782972.0
[2026-05-29 23:54:27] 2026-05-29 21:53:43,930 | INFO     | sum of deviations: -95391981292.00003
[2026-05-29 23:54:27] 2026-05-29 21:53:43,931 | INFO     | mean x (centered): 0.0
[2026-05-29 23:54:27] 2026-05-29 21:53:43,931 | INFO     | mean y: 2584587.9657794675
[2026-05-29 23:54:27] 2026-05-29 21:53:43,931 | INFO     | intersect: 2584587.9657794675
[2026-05-29 23:54:27] 2026-05-29 21:53:43,931 | INFO     | chi2: 1.041396677574524
[2026-05-29 23:54:27] 2026-05-29 21:53:43,932 | INFO     | current chi2=1.041396677574524 (change=2.908163939483522 %)
[2026-05-29 23:54:27] 2026-05-29 21:53:43,932 | INFO     | left removable region: 10
[2026-05-29 23:54:27] 2026-05-29 21:53:43,932 | INFO     | sum of square deviations: 4962187923.0
[2026-05-29 23:54:27] 2026-05-29 21:53:43,934 | INFO     | sum of deviations: -73825231029.0
[2026-05-29 23:54:27] 2026-05-29 21:53:43,935 | INFO     | mean x (centered): 0.0
[2026-05-29 23:54:27] 2026-05-29 21:53:43,935 | INFO     | mean y: 2594916.880952381
[2026-05-29 23:54:27] 2026-05-29 21:53:43,935 | INFO     | intersect: 2594916.880952381
[2026-05-29 23:54:27] 2026-05-29 21:53:43,935 | INFO     | chi2: 0.24873354697907657
[2026-05-29 23:54:27] 2026-05-29 21:53:43,936 | INFO     | current memory leak: -14.88 B/s (using 252 data points, chi2=0.25)
[2026-05-29 23:54:27] 2026-05-29 21:53:43,936 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-05-29 23:54:27] 2026-05-29 21:53:43,963 | INFO     | ..............................
[2026-05-29 23:54:27] 2026-05-29 21:53:43,963 | INFO     | . Timing measurements:
[2026-05-29 23:54:27] 2026-05-29 21:53:43,963 | INFO     | . get job = 0 s
[2026-05-29 23:54:27] 2026-05-29 21:53:43,963 | INFO     | . initial setup = 8 s
[2026-05-29 23:54:27] 2026-05-29 21:53:43,963 | INFO     | . payload setup = 19 s
[2026-05-29 23:54:27] 2026-05-29 21:53:43,963 | INFO     | . stage-in = 0 s
[2026-05-29 23:54:27] 2026-05-29 21:53:43,963 | INFO     | . payload execution = 16631 s
[2026-05-29 23:54:27] 2026-05-29 21:53:43,964 | INFO     | . stage-out = 3 s
[2026-05-29 23:54:27] 2026-05-29 21:53:43,964 | INFO     | . log creation = 1 s
[2026-05-29 23:54:27] 2026-05-29 21:53:43,964 | INFO     | ..............................
[2026-05-29 23:54:27] 2026-05-29 21:53:44,116 | INFO     | 
[2026-05-29 23:54:27] 2026-05-29 21:53:44,117 | INFO     | job summary report
[2026-05-29 23:54:27] 2026-05-29 21:53:44,117 | INFO     | --------------------------------------------------
[2026-05-29 23:54:27] 2026-05-29 21:53:44,117 | INFO     | PanDA job id: 7157453507
[2026-05-29 23:54:27] 2026-05-29 21:53:44,117 | INFO     | task id: 50533925
[2026-05-29 23:54:27] 2026-05-29 21:53:44,117 | INFO     | errors: (none)
[2026-05-29 23:54:27] 2026-05-29 21:53:44,117 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-29 23:54:27] 2026-05-29 21:53:44,117 | INFO     | pilot state: finished 
[2026-05-29 23:54:27] 2026-05-29 21:53:44,117 | INFO     | transexitcode: 0
[2026-05-29 23:54:27] 2026-05-29 21:53:44,117 | INFO     | exeerrorcode: 0
[2026-05-29 23:54:27] 2026-05-29 21:53:44,118 | INFO     | exeerrordiag: 
[2026-05-29 23:54:27] 2026-05-29 21:53:44,118 | INFO     | exitcode: 0
[2026-05-29 23:54:27] 2026-05-29 21:53:44,118 | INFO     | exitmsg: OK
[2026-05-29 23:54:27] 2026-05-29 21:53:44,118 | INFO     | cpuconsumptiontime: 64965 s
[2026-05-29 23:54:27] 2026-05-29 21:53:44,118 | INFO     | nevents: 400
[2026-05-29 23:54:27] 2026-05-29 21:53:44,118 | INFO     | neventsw: 0
[2026-05-29 23:54:27] 2026-05-29 21:53:44,118 | INFO     | pid: 24988
[2026-05-29 23:54:27] 2026-05-29 21:53:44,118 | INFO     | pgrp: 24988
[2026-05-29 23:54:27] 2026-05-29 21:53:44,118 | INFO     | corecount: 8
[2026-05-29 23:54:27] 2026-05-29 21:53:44,118 | INFO     | event service: False
[2026-05-29 23:54:27] 2026-05-29 21:53:44,119 | INFO     | sizes: {0: 2265987, 1: 2267589, 11: 2267589, 16654: 2299464, 16655: 2299463, 16660: 2308517, 16663: 2308701, 16666: 2308895}
[2026-05-29 23:54:27] 2026-05-29 21:53:44,119 | INFO     | --------------------------------------------------
[2026-05-29 23:54:27] 2026-05-29 21:53:44,119 | INFO     | 
[2026-05-29 23:54:27] 2026-05-29 21:53:44,119 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-05-29 23:54:27] 2026-05-29 21:53:44,527 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-29 23:54:27] 2026-05-29 21:53:44,527 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-29 23:54:27] 2026-05-29 21:53:44,527 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-29 23:54:27] 2026-05-29 21:53:44,528 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-29 23:54:27] 2026-05-29 21:53:44,528 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-29 23:54:27] 2026-05-29 21:53:44,528 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-29 23:54:27] 2026-05-29 21:53:44,528 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-29 23:54:27] 2026-05-29 21:53:44,528 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-29 23:54:27] 2026-05-29 21:53:44,528 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-29 23:54:27] 2026-05-29 21:53:44,528 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-29 23:54:27] 2026-05-29 21:53:44,528 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-29 23:54:27] 2026-05-29 21:53:44,528 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-29 23:54:27] 2026-05-29 21:53:44,529 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-29 23:54:27] 2026-05-29 21:53:44,529 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-29 23:54:27] 2026-05-29 21:53:44,529 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-29 23:54:27] 2026-05-29 21:53:44,529 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-29 23:54:27] 2026-05-29 21:53:44,529 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-29 23:54:27] 2026-05-29 21:53:44,529 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-29 23:54:27] 2026-05-29 21:53:44,529 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-29 23:54:27] 2026-05-29 21:53:44,529 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-29 23:54:27] 2026-05-29 21:53:44,529 | INFO     | job 7157453507 has completed (purged errors)
[2026-05-29 23:54:27] 2026-05-29 21:53:44,530 | INFO     | overall cleanup function is called
[2026-05-29 23:54:27] 2026-05-29 21:53:45,538 | INFO     | --- collectZombieJob: --- 10, [24988]
[2026-05-29 23:54:27] 2026-05-29 21:53:45,539 | INFO     | zombie collector waiting for pid 24988
[2026-05-29 23:54:27] 2026-05-29 21:53:45,539 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-29 23:54:27] 2026-05-29 21:53:45,539 | INFO     | collected zombie processes
[2026-05-29 23:54:27] 2026-05-29 21:53:45,539 | INFO     | will attempt to kill all subprocesses of pid=24988
[2026-05-29 23:54:27] 2026-05-29 21:53:45,594 | INFO     | process IDs to be killed: [24988] (in reverse order)
[2026-05-29 23:54:27] 2026-05-29 21:53:46,397 | WARNING  | found no corresponding commands to process id(s)
[2026-05-29 23:54:27] 2026-05-29 21:53:46,398 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-29 23:54:27] 2026-05-29 21:53:46,400 | INFO     | did not find any defunct processes belonging to 24988
[2026-05-29 23:54:27] 2026-05-29 21:53:46,401 | INFO     | did not find any defunct processes belonging to 24988
[2026-05-29 23:54:27] 2026-05-29 21:53:46,401 | INFO     | Ready for new job
[2026-05-29 23:54:27] 2026-05-29 21:53:46,403 | INFO     | ***************************************
[2026-05-29 23:54:27] 2026-05-29 21:53:46,403 | INFO     | ***  PanDA Pilot version 3.13.1.30  ***
[2026-05-29 23:54:27] 2026-05-29 21:53:46,404 | INFO     | ***************************************
[2026-05-29 23:54:27] 2026-05-29 21:53:46,404 | INFO     | 
[2026-05-29 23:54:27] 2026-05-29 21:53:46,404 | INFO     | pilot is running in a VM
[2026-05-29 23:54:27] 2026-05-29 21:53:46,404 | INFO     | architecture information:
[2026-05-29 23:54:27] 2026-05-29 21:53:46,412 | INFO     | executing command: cat /etc/os-release
[2026-05-29 23:54:27] 2026-05-29 21:53:46,581 | INFO     | cat /etc/os-release:
[2026-05-29 23:54:27] NAME="CentOS Linux"
[2026-05-29 23:54:27] VERSION="7 (Core)"
[2026-05-29 23:54:27] ID="centos"
[2026-05-29 23:54:27] ID_LIKE="rhel fedora"
[2026-05-29 23:54:27] VERSION_ID="7"
[2026-05-29 23:54:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-29 23:54:27] ANSI_COLOR="0;31"
[2026-05-29 23:54:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-29 23:54:27] HOME_URL="https://www.centos.org/"
[2026-05-29 23:54:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-29 23:54:27] 
[2026-05-29 23:54:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-29 23:54:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-29 23:54:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-29 23:54:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-29 23:54:27] 
[2026-05-29 23:54:27] 2026-05-29 21:53:46,582 | INFO     | ***************************************
[2026-05-29 23:54:27] 2026-05-29 21:53:47,086 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-05-29 23:54:27] 2026-05-29 21:53:47,313 | INFO     | sufficient remaining disk space (497028169728 B)
[2026-05-29 23:54:27] 2026-05-29 21:53:47,313 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-29 23:54:27] 2026-05-29 21:53:47,314 | INFO     | current server update state: UPDATING_FINAL
[2026-05-29 23:54:27] 2026-05-29 21:53:47,314 | INFO     | update_server=False
[2026-05-29 23:54:27] 2026-05-29 21:53:47,314 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-29 23:54:27] 2026-05-29 21:53:47,314 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-29 23:54:27] 2026-05-29 21:53:47,317 | INFO     | all data control threads have been joined
[2026-05-29 23:54:27] 2026-05-29 21:53:47,554 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-29 23:54:27] 2026-05-29 21:53:47,555 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-29 23:54:27] 2026-05-29 21:53:47,555 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-29 23:54:27] 2026-05-29 21:53:47,555 | INFO     | will abort loop
[2026-05-29 23:54:27] 2026-05-29 21:53:47,603 | INFO     | all job control threads have been joined
[2026-05-29 23:54:27] 2026-05-29 21:53:47,924 | INFO     | all payload control threads have been joined
[2026-05-29 23:54:27] 2026-05-29 21:53:48,320 | INFO     | [job] retrieve thread has finished
[2026-05-29 23:54:27] 2026-05-29 21:53:48,325 | INFO     | [data] control thread has finished
[2026-05-29 23:54:27] 2026-05-29 21:53:48,561 | INFO     | [job] job monitor thread has finished
[2026-05-29 23:54:27] 2026-05-29 21:53:48,609 | INFO     | [job] control thread has finished
[2026-05-29 23:54:27] 2026-05-29 21:53:48,783 | INFO     | [payload] validate_post thread has finished
[2026-05-29 23:54:27] 2026-05-29 21:53:48,802 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-29 23:54:27] 2026-05-29 21:53:48,931 | INFO     | [payload] control thread has finished
[2026-05-29 23:54:27] 2026-05-29 21:53:48,942 | INFO     | [data] copytool_in thread has finished
[2026-05-29 23:54:27] 2026-05-29 21:53:48,955 | INFO     | [payload] execute_payloads thread has finished
[2026-05-29 23:54:27] 2026-05-29 21:53:49,032 | INFO     | [job] validate thread has finished
[2026-05-29 23:54:27] 2026-05-29 21:53:49,131 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-29 23:54:27] 2026-05-29 21:53:49,370 | INFO     | [payload] validate_pre thread has finished
[2026-05-29 23:54:27] 2026-05-29 21:53:49,371 | INFO     | [job] create_data_payload thread has finished
[2026-05-29 23:54:27] 2026-05-29 21:53:49,455 | INFO     | [payload] failed_post thread has finished
[2026-05-29 23:54:27] 2026-05-29 21:53:50,137 | INFO     | [job] queue monitor thread has finished
[2026-05-29 23:54:27] 2026-05-29 21:53:50,809 | INFO     | [data] copytool_out thread has finished
[2026-05-29 23:54:27] 2026-05-29 21:53:51,323 | INFO     | [data] queue_monitor thread has finished
[2026-05-29 23:54:27] 2026-05-29 21:53:57,943 | INFO     | job.realtimelogging is not enabled
[2026-05-29 23:54:27] 2026-05-29 21:53:58,949 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-29 23:54:27] 2026-05-29 21:54:15,411 | INFO     | [monitor] cgroup control has ended
[2026-05-29 23:54:27] 2026-05-29 21:54:16,017 | INFO     | PID=20555 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-29 23:54:27] 2026-05-29 21:54:16,018 | INFO     | .. there are 2 such processes running
[2026-05-29 23:54:27] 2026-05-29 21:54:16,018 | INFO     | found 0 job(s) in 20 queues
[2026-05-29 23:54:27] 2026-05-29 21:54:16,018 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-29 23:54:27] 2026-05-29 21:54:16,018 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-29 23:54:27] 2026-05-29 21:54:16,605 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140703170217792)>', '<ExcThread(monitor, started 140702524634880)>']
[2026-05-29 23:54:27] 2026-05-29 21:54:17,024 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-29 23:54:27] 2026-05-29 21:54:17,025 | INFO     | [monitor] control thread has ended
[2026-05-29 23:54:27] 2026-05-29 21:54:21,631 | INFO     | all workflow threads have been joined
[2026-05-29 23:54:27] 2026-05-29 21:54:21,632 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-29 23:54:27] 2026-05-29 21:54:21,632 | INFO     | traces error code: 0
[2026-05-29 23:54:27] 2026-05-29 21:54:21,632 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-29 23:54:27] 2026-05-29 21:54:22,211 [wrapper] ==== pilot stdout END ====
[2026-05-29 23:54:27] 2026-05-29 21:54:22,333 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-29 23:54:27] 2026-05-29 21:54:22,461 [wrapper] pilotpid: 20555
[2026-05-29 23:54:27] 2026-05-29 21:54:22,569 [wrapper] Pilot exit status: 0
[2026-05-29 23:54:27] 2026-05-29 21:54:22,950 [wrapper] pandaids: 7157453507
[2026-05-29 23:54:27] 2026-05-29 21:54:24,241 [wrapper] cleanup supervisor_pilot 31959 20556
[2026-05-29 23:54:27] 2026-05-29 21:54:24,346 [wrapper] Test setup, not cleaning
[2026-05-29 23:54:27] 2026-05-29 21:54:24,449 [wrapper] apfmon messages muted
[2026-05-29 23:54:27] 2026-05-29 21:54:24,568 [wrapper] ==== wrapper stdout END ====
[2026-05-29 23:54:27] 2026-05-29 21:54:24,677 [wrapper] ==== wrapper stderr END ====
[2026-05-29 23:54:27]  *** Error codes and diagnostics ***
[2026-05-29 23:54:27]     "exeErrorCode": 0,
[2026-05-29 23:54:27]     "pilotErrorCode": 0,
[2026-05-29 23:54:27]  *** Listing of results directory ***
[2026-05-29 23:54:27] total 512560
[2026-05-29 23:54:27] -rw-r--r--. 1 boinc boinc    709501 May 29 05:03 pilot3.tar.gz
[2026-05-29 23:54:27] -rwx------. 1 boinc boinc     36281 May 29 05:03 runpilot2-wrapper.sh
[2026-05-29 23:54:27] -rw-r--r--. 1 boinc boinc      5631 May 29 05:04 queuedata.json
[2026-05-29 23:54:27] -rw-r--r--. 1 boinc boinc       100 May 29 19:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-29 23:54:27] -rwxr-xr-x. 1 boinc boinc      7986 May 29 19:15 run_atlas
[2026-05-29 23:54:27] -rw-r--r--. 1 boinc boinc       105 May 29 19:15 job.xml
[2026-05-29 23:54:27] -rw-r--r--. 1 boinc boinc      6306 May 29 19:15 init_data.xml
[2026-05-29 23:54:27] -rw-r--r--. 2 boinc boinc 295761058 May 29 19:15 EVNT.50469837._000125.pool.root.1
[2026-05-29 23:54:27] -rw-r--r--. 2 boinc boinc     15667 May 29 19:15 start_atlas.sh
[2026-05-29 23:54:27] drwxrwx--x. 2 boinc boinc        68 May 29 19:15 shared
[2026-05-29 23:54:27] -rw-r--r--. 2 boinc boinc    722733 May 29 19:15 input.tar.gz
[2026-05-29 23:54:27] -rw-r--r--. 1 boinc boinc         0 May 29 19:15 boinc_lockfile
[2026-05-29 23:54:27] -rw-r--r--. 1 boinc boinc      2514 May 29 19:15 pandaJob.out
[2026-05-29 23:54:27] -rw-------. 1 boinc boinc    995571 May 29 19:15 agis_schedconf.cvmfs.json
[2026-05-29 23:54:27] -rw-------. 1 boinc boinc   1251485 May 29 19:15 cric_ddmendpoints.json
[2026-05-29 23:54:27] -rw-------. 1 boinc boinc       415 May 29 19:15 workernode_map.json
[2026-05-29 23:54:27] drwx------. 5 boinc boinc      4096 May 29 19:15 pilot3
[2026-05-29 23:54:27] -rw-------. 1 boinc boinc 221264156 May 29 23:52 HITS.50533925._003118.pool.root.1
[2026-05-29 23:54:27] -rw-r--r--. 1 boinc boinc       489 May 29 23:52 boinc_task_state.xml
[2026-05-29 23:54:27] -rw-------. 1 boinc boinc      1017 May 29 23:53 memory_monitor_summary.json
[2026-05-29 23:54:27] -rw-------. 1 boinc boinc        95 May 29 23:53 pilot_heartbeat.json
[2026-05-29 23:54:27] -rw-------. 1 boinc boinc         0 May 29 23:53 agis_ddmendpoints.agis.ALL.json
[2026-05-29 23:54:27] -rw-------. 1 boinc boinc    419784 May 29 23:53 log.50533925._003118.job.log.tgz.1
[2026-05-29 23:54:27] -rw-------. 1 boinc boinc      6387 May 29 23:53 heartbeat_new.json
[2026-05-29 23:54:27] -rw-------. 1 boinc boinc      6278 May 29 23:53 heartbeat.json
[2026-05-29 23:54:27] -rw-r--r--. 1 boinc boinc      8192 May 29 23:54 boinc_mmap_file
[2026-05-29 23:54:27] -rw-r--r--. 1 boinc boinc        28 May 29 23:54 wrapper_checkpoint.txt
[2026-05-29 23:54:27] -rw-------. 1 boinc boinc      5141 May 29 23:54 pilotlog.txt
[2026-05-29 23:54:27] -rw-------. 1 boinc boinc   1538202 May 29 23:54 log.50533925._003118.job.log.1
[2026-05-29 23:54:27] -rw-------. 1 boinc boinc       357 May 29 23:54 output.list
[2026-05-29 23:54:27] -rw-r--r--. 1 boinc boinc       410 May 29 23:54 runtime_log
[2026-05-29 23:54:27] -rw-------. 1 boinc boinc   1976320 May 29 23:54 result.tar.gz
[2026-05-29 23:54:27] -rw-r--r--. 1 boinc boinc      8439 May 29 23:54 runtime_log.err
[2026-05-29 23:54:27] -rw-------. 1 boinc boinc       656 May 29 23:54 0218e4a5e154.diag
[2026-05-29 23:54:27] -rw-r--r--. 1 boinc boinc     20634 May 29 23:54 stderr.txt
[2026-05-29 23:54:27] HITS file was successfully produced:
[2026-05-29 23:54:27] -rw-------. 1 boinc boinc 221264156 May 29 23:52 shared/HITS.pool.root.1
[2026-05-29 23:54:27]  *** Contents of shared directory: ***
[2026-05-29 23:54:27] total 507568
[2026-05-29 23:54:27] -rw-r--r--. 2 boinc boinc 295761058 May 29 19:15 ATLAS.root_0
[2026-05-29 23:54:27] -rw-r--r--. 2 boinc boinc     15667 May 29 19:15 start_atlas.sh
[2026-05-29 23:54:27] -rw-r--r--. 2 boinc boinc    722733 May 29 19:15 input.tar.gz
[2026-05-29 23:54:27] -rw-------. 1 boinc boinc 221264156 May 29 23:52 HITS.pool.root.1
[2026-05-29 23:54:27] -rw-------. 1 boinc boinc   1976320 May 29 23:54 result.tar.gz
23:54:28 (16685): run_atlas exited; CPU time 65118.325035
23:54:28 (16685): called boinc_finish(0)

</stderr_txt>
]]>

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