Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
2026-05-29 00:02:40 (14984): vboxwrapper version 26210
2026-05-29 00:02:40 (14984): BOINC client version: 8.2.9
2026-05-29 00:02:40 (14984): Detected: VirtualBox VboxManage Interface (Version: 7.2.8)
2026-05-29 00:02:41 (14984): Successfully copied 'init_data.xml' to the shared directory.
2026-05-29 00:02:41 (14984): Create VM. (boinc_95cba21fd28dfaff, slot#0)
2026-05-29 00:02:41 (14984): Setting Memory Size for VM. (4400MB)
2026-05-29 00:02:42 (14984): Setting CPU Count for VM. (4)
2026-05-29 00:02:42 (14984): Setting Chipset Options for VM.
2026-05-29 00:02:42 (14984): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-05-29 00:02:42 (14984): Setting Boot Options for VM.
2026-05-29 00:02:43 (14984): Setting Network Configuration for NAT. (Driver: virtio)
2026-05-29 00:02:43 (14984): Enabling VM Network Access.
2026-05-29 00:02:43 (14984): Disabling USB Support for VM.
2026-05-29 00:02:44 (14984): Disabling COM Port Support for VM.
2026-05-29 00:02:44 (14984): Disabling LPT Port Support for VM.
2026-05-29 00:02:44 (14984): Disabling Audio Support for VM.
2026-05-29 00:02:44 (14984): Disabling Clipboard Support for VM.
2026-05-29 00:02:45 (14984): Disabling Drag and Drop Support for VM.
2026-05-29 00:02:45 (14984): Adding storage controller(s) to VM.
2026-05-29 00:02:45 (14984): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-05-29 00:02:46 (14984): Adding VirtualBox Guest Additions to VM.
2026-05-29 00:02:46 (14984): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-05-29 00:02:46 (14984): forwarding host port 64603 to guest port 80
2026-05-29 00:02:47 (14984): Enabling remote desktop for VM.
2026-05-29 00:02:47 (14984): Required extension pack not installed, remote desktop not enabled.
2026-05-29 00:02:47 (14984): Enabling shared directory for VM.
2026-05-29 00:02:47 (14984): Starting VM using VBoxManage interface. (boinc_95cba21fd28dfaff, slot#0)
2026-05-29 00:02:52 (14984): Successfully started VM. (PID = '8580')
2026-05-29 00:02:52 (14984): Reporting VM Process ID to BOINC.
2026-05-29 00:02:52 (14984): Guest Log: BIOS: VirtualBox 7.2.8
2026-05-29 00:02:52 (14984): Guest Log: CPUID EDX: 0x178bfbff
2026-05-29 00:02:52 (14984): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-05-29 00:02:52 (14984): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-05-29 00:02:52 (14984): VM state change detected. (old = 'poweredoff', new = 'running')
2026-05-29 00:02:52 (14984): Detected: Web Application Enabled (http://localhost:64603)
2026-05-29 00:02:52 (14984): Preference change detected
2026-05-29 00:02:52 (14984): Setting CPU throttle for VM. (100%)
2026-05-29 00:02:53 (14984): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-05-29 00:02:54 (14984): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-05-29 00:02:54 (14984): Guest Log: BIOS: Booting from Hard Disk...
2026-05-29 00:02:57 (14984): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-05-29 00:02:57 (14984): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-05-29 00:02:57 (14984): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-05-29 00:02:57 (14984): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-05-29 00:02:57 (14984): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-05-29 00:02:57 (14984): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-05-29 00:02:57 (14984): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-05-29 00:02:57 (14984): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-05-29 00:02:57 (14984): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-05-29 00:02:57 (14984): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-05-29 00:02:57 (14984): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-05-29 00:02:57 (14984): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-05-29 00:02:57 (14984): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-05-29 00:02:58 (14984): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-05-29 00:02:58 (14984): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-05-29 00:02:58 (14984): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-05-29 00:02:58 (14984): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-05-29 00:02:58 (14984): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-05-29 00:02:58 (14984): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-05-29 00:02:58 (14984): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-05-29 00:02:58 (14984): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-05-29 00:02:58 (14984): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-05-29 00:02:58 (14984): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-05-29 00:02:58 (14984): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-05-29 00:02:58 (14984): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-05-29 00:02:58 (14984): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-05-29 00:02:58 (14984): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-05-29 00:02:58 (14984): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-05-29 00:02:58 (14984): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-05-29 00:02:58 (14984): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-05-29 00:02:58 (14984): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-05-29 00:02:58 (14984): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-05-29 00:03:03 (14984): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-05-29 00:03:03 (14984): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-05-29 00:03:09 (14984): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-05-29 00:03:09 (14984): Guest Log: 00:00:00.000160 main     Log opened 2026-05-29T00:03:07.883336000Z
2026-05-29 00:03:09 (14984): Guest Log: 00:00:00.000293 main     OS Product: Linux
2026-05-29 00:03:09 (14984): Guest Log: 00:00:00.000375 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-05-29 00:03:09 (14984): Guest Log: 00:00:00.000419 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-05-29 00:03:09 (14984): Guest Log: 00:00:00.000463 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-05-29 00:03:09 (14984): Guest Log: 00:00:00.000464 main     Process ID: 1307
2026-05-29 00:03:09 (14984): Guest Log: 00:00:00.000465 main     Package type: LINUX_64BITS_GENERIC
2026-05-29 00:03:09 (14984): Guest Log: 00:00:00.001346 main     5.2.32 r132073 started. Verbose level = 0
2026-05-29 00:03:09 (14984): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-05-29 00:03:09 (14984): Guest Log: [INFO] Mounting shared directory
2026-05-29 00:03:09 (14984): Guest Log: [INFO] Checking for init_data.xml
2026-05-29 00:03:14 (14984): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-05-29 00:03:14 (14984): Guest Log: [INFO] Detected branch: prod
2026-05-29 00:03:14 (14984): Guest Log: This is the prod version of the ATLAS job wrapper
2026-05-29 00:03:14 (14984): Guest Log: Copying input files
2026-05-29 00:03:15 (14984): Guest Log: Copied input files into RunAtlas.
2026-05-29 00:03:15 (14984): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-05-29 00:03:15 (14984): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-05-29 00:03:15 (14984): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-05-29 00:03:15 (14984): Guest Log: Further information can be found at the LHC@home message board.
2026-05-29 00:03:19 (14984): Guest Log: 00:00:10.006635 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 011 664 078 000ns (GuestNow=1 780 030 999 550 391 000 ns GuestLast=1 780 012 987 886 313 000 ns fSetTimeLastLoop=true )
2026-05-29 00:03:25 (14984): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-05-29 00:03:25 (14984): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-05-29 00:03:25 (14984): Guest Log: 2.6.3.0 1584 0 32196 159921 3 1 3117654 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-05-29 00:03:25 (14984): Guest Log: copied the webapp to /var/www
2026-05-29 00:03:25 (14984): Guest Log: ATHENA_PROC_NUMBER=4
2026-05-29 00:03:25 (14984): Guest Log: ATHENA_CORE_NUMBER=4
2026-05-29 00:03:26 (14984): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-05-29 00:03:26 (14984): Guest Log:  *** Starting ATLAS job. (PandaID=7157448056 taskID=50533748) ***
2026-05-29 01:42:55 (14984): Status Report: Elapsed Time: '6000.000000'
2026-05-29 01:42:55 (14984): Status Report: CPU Time: '21853.671875'
2026-05-29 03:22:58 (14984): Status Report: Elapsed Time: '12000.000000'
2026-05-29 03:22:58 (14984): Status Report: CPU Time: '45615.734375'
2026-05-29 05:03:00 (14984): Status Report: Elapsed Time: '18000.000000'
2026-05-29 05:03:00 (14984): Status Report: CPU Time: '69403.937500'
2026-05-29 05:19:14 (14984): Guest Log:  *** Job finished ***
2026-05-29 05:19:14 (14984): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-05-29 05:19:14 (14984): Guest Log: 2026-05-29 10:18:38,173 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-05-29 05:19:14 (14984): Guest Log: 2026-05-29 10:18:38,173 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-05-29 05:19:14 (14984): Guest Log: 2026-05-29 10:18:59,644 | INFO     | [monitor] cgroup control has ended
2026-05-29 05:19:14 (14984): Guest Log: 2026-05-29 10:19:00,046 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139965555898176)>', '<ExcThread(monitor, started 139964973041408)>']
2026-05-29 05:19:14 (14984): Guest Log: 2026-05-29 10:19:00,808 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-05-29 05:19:14 (14984): Guest Log: 2026-05-29 10:19:00,808 | INFO     | [monitor] control thread has ended
2026-05-29 05:19:14 (14984): Guest Log: 2026-05-29 10:19:05,054 | INFO     | all workflow threads have been joined
2026-05-29 05:19:14 (14984): Guest Log: 2026-05-29 10:19:05,055 | INFO     | end of generic workflow (traces error code: 0)
2026-05-29 05:19:14 (14984): Guest Log: 2026-05-29 10:19:05,055 | INFO     | traces error code: 0
2026-05-29 05:19:14 (14984): Guest Log: 2026-05-29 10:19:05,055 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-05-29 05:19:14 (14984): Guest Log: 2026-05-29 10:19:05,160 [wrapper] ==== pilot stdout END ====
2026-05-29 05:19:14 (14984): Guest Log: 2026-05-29 10:19:05,166 [wrapper] ==== wrapper stdout RESUME ====
2026-05-29 05:19:14 (14984): Guest Log: 2026-05-29 10:19:05,172 [wrapper] pilotpid: 5988
2026-05-29 05:19:14 (14984): Guest Log: 2026-05-29 10:19:05,177 [wrapper] Pilot exit status: 0
2026-05-29 05:19:14 (14984): Guest Log: 2026-05-29 10:19:05,281 [wrapper] pandaids: 7157448056
2026-05-29 05:19:14 (14984): Guest Log: 2026-05-29 10:19:05,323 [wrapper] cleanup supervisor_pilot 30124 5989
2026-05-29 05:19:14 (14984): Guest Log: 2026-05-29 10:19:05,328 [wrapper] Test setup, not cleaning
2026-05-29 05:19:14 (14984): Guest Log: 2026-05-29 10:19:05,333 [wrapper] apfmon messages muted
2026-05-29 05:19:14 (14984): Guest Log: 2026-05-29 10:19:05,339 [wrapper] ==== wrapper stdout END ====
2026-05-29 05:19:14 (14984): Guest Log: 2026-05-29 10:19:05,344 [wrapper] ==== wrapper stderr END ====
2026-05-29 05:19:14 (14984): Guest Log:  *** Error codes and diagnostics ***
2026-05-29 05:19:14 (14984): Guest Log:     "exeErrorCode": 0,
2026-05-29 05:19:14 (14984): Guest Log:     "pilotErrorCode": 0,
2026-05-29 05:19:14 (14984): Guest Log:  *** Listing of results directory ***
2026-05-29 05:19:14 (14984): Guest Log: total 260132
2026-05-29 05:19:14 (14984): Guest Log: -rw-r--r--. 1 atlas atlas    709501 May 29 00:20 pilot3.tar.gz
2026-05-29 05:19:14 (14984): Guest Log: -rw-r--r--. 1 atlas atlas      5631 May 29 00:22 queuedata.json
2026-05-29 05:19:14 (14984): Guest Log: -rwx------. 1 atlas atlas     36281 May 29 00:23 runpilot2-wrapper.sh
2026-05-29 05:19:14 (14984): Guest Log: -rwxr-xr-x. 1 atlas atlas      8613 May 29 05:03 init_data.xml
2026-05-29 05:19:14 (14984): Guest Log: -rwxr-xr-x. 1 atlas atlas    722756 May 29 05:03 input.tar.gz
2026-05-29 05:19:14 (14984): Guest Log: -rwxr-xr-x. 1 atlas atlas     15667 May 29 05:03 start_atlas.sh
2026-05-29 05:19:14 (14984): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 29 05:03 EVNT.50469639._000029.pool.root.1 -> /data/./ATLAS.root_0
2026-05-29 05:19:14 (14984): Guest Log: -rw-r--r--. 1 atlas atlas      2616 May 29 05:03 pandaJob.out
2026-05-29 05:19:14 (14984): Guest Log: -rw-------. 1 atlas atlas    996138 May 29 05:04 agis_schedconf.cvmfs.json
2026-05-29 05:19:14 (14984): Guest Log: -rw-------. 1 atlas atlas   1251485 May 29 05:04 cric_ddmendpoints.json
2026-05-29 05:19:14 (14984): Guest Log: -rw-------. 1 atlas atlas       422 May 29 05:04 workernode_map.json
2026-05-29 05:19:14 (14984): Guest Log: drwx------. 5 atlas atlas      4096 May 29 05:04 pilot3
2026-05-29 05:19:14 (14984): Guest Log: -rw-------. 1 atlas atlas 258338997 May 29 10:17 HITS.50533748._000724.pool.root.1
2026-05-29 05:19:14 (14984): Guest Log: -rw-------. 1 atlas atlas        95 May 29 10:17 pilot_heartbeat.json
2026-05-29 05:19:14 (14984): Guest Log: -rw-------. 1 atlas atlas      1029 May 29 10:17 memory_monitor_summary.json
2026-05-29 05:19:14 (14984): Guest Log: -rw-------. 1 atlas atlas         0 May 29 10:18 agis_ddmendpoints.agis.ALL.json
2026-05-29 05:19:14 (14984): Guest Log: -rw-------. 1 atlas atlas    385714 May 29 10:18 log.50533748._000724.job.log.tgz.1
2026-05-29 05:19:14 (14984): Guest Log: -rw-------. 1 atlas atlas      6407 May 29 10:18 heartbeat_new.json
2026-05-29 05:19:14 (14984): Guest Log: -rw-------. 1 atlas atlas      6298 May 29 10:18 heartbeat.json
2026-05-29 05:19:14 (14984): Guest Log: -rw-------. 1 atlas atlas      4804 May 29 10:19 pilotlog.txt
2026-05-29 05:19:14 (14984): Guest Log: -rw-------. 1 atlas atlas   1700408 May 29 10:19 log.50533748._000724.job.log.1
2026-05-29 05:19:14 (14984): Guest Log: -rw-------. 1 atlas atlas       357 May 29 10:19 output.list
2026-05-29 05:19:14 (14984): Guest Log: -rw-r--r--. 1 atlas atlas       410 May 29 10:19 runtime_log
2026-05-29 05:19:14 (14984): Guest Log: -rw-------. 1 atlas atlas   2099200 May 29 10:19 result.tar.gz
2026-05-29 05:19:14 (14984): Guest Log: -rw-r--r--. 1 atlas atlas      8381 May 29 10:19 runtime_log.err
2026-05-29 05:19:14 (14984): Guest Log: -rw-------. 1 atlas atlas       660 May 29 10:19 dc91489d237e.diag
2026-05-29 05:19:14 (14984): Guest Log: Looking for outputfile HITS.50533748._000724.pool.root.1
2026-05-29 05:19:14 (14984): Guest Log: HITS file was successfully produced
2026-05-29 05:19:14 (14984): Guest Log: -rw-------. 1 atlas atlas 258338997 May 29 10:17 /home/atlas/RunAtlas/HITS.50533748._000724.pool.root.1
2026-05-29 05:19:15 (14984): Guest Log: Successfully finished the ATLAS job!
2026-05-29 05:19:15 (14984): Guest Log: Copying the results back to the shared directory!
2026-05-29 05:19:15 (14984): Guest Log:  *** Contents of shared directory: ***
2026-05-29 05:19:15 (14984): Guest Log: total 516432
2026-05-29 05:19:15 (14984): Guest Log: -rwxrwxrwx. 1 root root 267625141 May 29 05:02 ATLAS.root_0
2026-05-29 05:19:15 (14984): Guest Log: -rwxrwxrwx. 1 root root 258338997 May 29  2026 HITS.pool.root.1
2026-05-29 05:19:15 (14984): Guest Log: -rwxrwxrwx. 1 root root      8613 May 29 05:02 init_data.xml
2026-05-29 05:19:15 (14984): Guest Log: -rwxrwxrwx. 1 root root    722756 May 29 04:59 input.tar.gz
2026-05-29 05:19:15 (14984): Guest Log: -rwxrwxrwx. 1 root root   2099200 May 29  2026 result.tar.gz
2026-05-29 05:19:15 (14984): Guest Log: -rwxrwxrwx. 1 root root     15667 May 29 04:59 start_atlas.sh
2026-05-29 05:19:15 (14984): Guest Log:  *** Success! Shutting down the machine. ***
2026-05-29 05:19:15 (14984): VM Completion File Detected.
2026-05-29 05:19:15 (14984): Powering off VM.
2026-05-29 05:19:15 (14984): Successfully stopped VM.
2026-05-29 05:19:15 (14984): Deregistering VM. (boinc_95cba21fd28dfaff, slot#0)
2026-05-29 05:19:15 (14984): Removing network bandwidth throttle group from VM.
2026-05-29 05:19:16 (14984): Removing VM from VirtualBox.
2026-05-29 05:19:21 (14984): called boinc_finish(0)

</stderr_txt>
]]>

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