Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:51:44 (883048): wrapper (7.7.26015): starting
06:51:44 (883048): wrapper: running run_atlas (--nthreads 4)
[2026-05-29 06:51:44] Arguments: --nthreads 4
[2026-05-29 06:51:44] Threads: 4
[2026-05-29 06:51:44] Checking for CVMFS
[2026-05-29 06:51:44] No cvmfs_config command found, will try listing directly
[2026-05-29 06:51:44] CVMFS is ok
[2026-05-29 06:51:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-29 06:51:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-29 06:51:44] Further information can be found at the LHC@home message board.
[2026-05-29 06:51:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-29 06:51:44] Checking for apptainer binary...
[2026-05-29 06:51:44] which: no apptainer in ((null))
[2026-05-29 06:51:44] apptainer is not installed, using version from CVMFS
[2026-05-29 06:51:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-29 06:51:44] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot100/slots/3/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2026-05-29 06:51:44] apptainer works
[2026-05-29 06:51:44] Set ATHENA_PROC_NUMBER=4
[2026-05-29 06:51:44] Set ATHENA_CORE_NUMBER=4
[2026-05-29 06:51:44] Starting ATLAS job with PandaID=7157447994
[2026-05-29 06:51:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot100/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-29 11:45:22]  *** The last 200 lines of the pilot log: ***
[2026-05-29 11:45:22] 2026-05-29 09:41:38,776 | INFO     | using path: /var/lib/boinc/var/slot100/slots/3/PanDA_Pilot-7157447994/memory_monitor_summary.json (trf name=prmon)
[2026-05-29 11:45:22] 2026-05-29 09:41:38,776 | INFO     | extracted standard info from prmon json
[2026-05-29 11:45:22] 2026-05-29 09:41:38,776 | INFO     | extracted standard memory fields from prmon json
[2026-05-29 11:45:22] 2026-05-29 09:41:38,777 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-29 11:45:22] 2026-05-29 09:41:38,777 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-29 11:45:22] 2026-05-29 09:41:38,782 | INFO     | fitting pss+swap vs Time
[2026-05-29 11:45:22] 2026-05-29 09:41:38,782 | INFO     | sum of square deviations: 7178069470.0
[2026-05-29 11:45:22] 2026-05-29 09:41:38,785 | INFO     | sum of deviations: 31847182010.99999
[2026-05-29 11:45:22] 2026-05-29 09:41:38,785 | INFO     | mean x (centered): 0.0
[2026-05-29 11:45:22] 2026-05-29 09:41:38,785 | INFO     | mean y: 2335202.803508772
[2026-05-29 11:45:22] 2026-05-29 09:41:38,785 | INFO     | intersect: 2335202.803508772
[2026-05-29 11:45:22] 2026-05-29 09:41:38,785 | INFO     | chi2: 2.1231466114820776
[2026-05-29 11:45:22] 2026-05-29 09:41:38,786 | INFO     | sum of square deviations: 6806862510.0
[2026-05-29 11:45:22] 2026-05-29 09:41:38,788 | INFO     | sum of deviations: 48756264860.5
[2026-05-29 11:45:22] 2026-05-29 09:41:38,788 | INFO     | mean x (centered): 0.0
[2026-05-29 11:45:22] 2026-05-29 09:41:38,788 | INFO     | mean y: 2342046.125
[2026-05-29 11:45:22] 2026-05-29 09:41:38,788 | INFO     | intersect: 2342046.125
[2026-05-29 11:45:22] 2026-05-29 09:41:38,788 | INFO     | chi2: 1.3591093428152177
[2026-05-29 11:45:22] 2026-05-29 09:41:38,789 | INFO     | current chi2=1.3591093428152177 (change=35.98608143850783 %)
[2026-05-29 11:45:22] 2026-05-29 09:41:38,789 | INFO     | sum of square deviations: 6448679050.0
[2026-05-29 11:45:22] 2026-05-29 09:41:38,791 | INFO     | sum of deviations: 47687720448.999985
[2026-05-29 11:45:22] 2026-05-29 09:41:38,791 | INFO     | mean x (centered): 0.0
[2026-05-29 11:45:22] 2026-05-29 09:41:38,791 | INFO     | mean y: 2341591.12
[2026-05-29 11:45:22] 2026-05-29 09:41:38,791 | INFO     | intersect: 2341591.12
[2026-05-29 11:45:22] 2026-05-29 09:41:38,791 | INFO     | chi2: 1.3593446637749274
[2026-05-29 11:45:22] 2026-05-29 09:41:38,792 | INFO     | current chi2=1.3593446637749274 (change=-0.01731435082494888 %)
[2026-05-29 11:45:22] 2026-05-29 09:41:38,792 | INFO     | right removable region: 274
[2026-05-29 11:45:22] 2026-05-29 09:41:38,792 | INFO     | sum of square deviations: 6806862510.0
[2026-05-29 11:45:22] 2026-05-29 09:41:38,794 | INFO     | sum of deviations: -6525507818.0
[2026-05-29 11:45:22] 2026-05-29 09:41:38,794 | INFO     | mean x (centered): 0.0
[2026-05-29 11:45:22] 2026-05-29 09:41:38,794 | INFO     | mean y: 2350832.9214285715
[2026-05-29 11:45:22] 2026-05-29 09:41:38,794 | INFO     | intersect: 2350832.9214285715
[2026-05-29 11:45:22] 2026-05-29 09:41:38,795 | INFO     | chi2: 0.788633353401913
[2026-05-29 11:45:22] 2026-05-29 09:41:38,795 | INFO     | current chi2=0.788633353401913 (change=62.855445349984485 %)
[2026-05-29 11:45:22] 2026-05-29 09:41:38,795 | INFO     | sum of square deviations: 6448679050.0
[2026-05-29 11:45:22] 2026-05-29 09:41:38,797 | INFO     | sum of deviations: -9887585770.0
[2026-05-29 11:45:22] 2026-05-29 09:41:38,797 | INFO     | mean x (centered): 0.0
[2026-05-29 11:45:22] 2026-05-29 09:41:38,797 | INFO     | mean y: 2352254.0836363635
[2026-05-29 11:45:22] 2026-05-29 09:41:38,797 | INFO     | intersect: 2352254.0836363635
[2026-05-29 11:45:22] 2026-05-29 09:41:38,797 | INFO     | chi2: 0.7803689246390113
[2026-05-29 11:45:22] 2026-05-29 09:41:38,798 | INFO     | current chi2=0.7803689246390113 (change=1.047943093866315 %)
[2026-05-29 11:45:22] 2026-05-29 09:41:38,798 | INFO     | left removable region: 10
[2026-05-29 11:45:22] 2026-05-29 09:41:38,798 | INFO     | sum of square deviations: 5705372090.0
[2026-05-29 11:45:22] 2026-05-29 09:41:38,800 | INFO     | sum of deviations: 6783658353.999999
[2026-05-29 11:45:22] 2026-05-29 09:41:38,800 | INFO     | mean x (centered): 0.0
[2026-05-29 11:45:22] 2026-05-29 09:41:38,800 | INFO     | mean y: 2359497.0833333335
[2026-05-29 11:45:22] 2026-05-29 09:41:38,800 | INFO     | intersect: 2359497.0833333335
[2026-05-29 11:45:22] 2026-05-29 09:41:38,800 | INFO     | chi2: 0.0033828901568596207
[2026-05-29 11:45:22] 2026-05-29 09:41:38,800 | INFO     | current memory leak: 1.19 B/s (using 264 data points, chi2=0.00)
[2026-05-29 11:45:22] 2026-05-29 09:41:38,801 | INFO     | could have reported an average CPU frequency of 2677 MHz (13 samples)
[2026-05-29 11:45:22] 2026-05-29 09:41:38,801 | INFO     | ..............................
[2026-05-29 11:45:22] 2026-05-29 09:41:38,801 | INFO     | . Timing measurements:
[2026-05-29 11:45:22] 2026-05-29 09:41:38,802 | INFO     | . get job = 0 s
[2026-05-29 11:45:22] 2026-05-29 09:41:38,802 | INFO     | . initial setup = 8 s
[2026-05-29 11:45:22] 2026-05-29 09:41:38,802 | INFO     | . payload setup = 15 s
[2026-05-29 11:45:22] 2026-05-29 09:41:38,802 | INFO     | . stage-in = 0 s
[2026-05-29 11:45:22] 2026-05-29 09:41:38,802 | INFO     | . payload execution = 17334 s
[2026-05-29 11:45:22] 2026-05-29 09:41:38,802 | INFO     | . stage-out = 0 s
[2026-05-29 11:45:22] 2026-05-29 09:41:38,802 | INFO     | . log creation = 0 s
[2026-05-29 11:45:22] 2026-05-29 09:41:38,802 | INFO     | ..............................
[2026-05-29 11:45:22] 2026-05-29 09:41:38,888 | INFO     | 
[2026-05-29 11:45:22] 2026-05-29 09:41:38,888 | INFO     | job summary report
[2026-05-29 11:45:22] 2026-05-29 09:41:38,888 | INFO     | --------------------------------------------------
[2026-05-29 11:45:22] 2026-05-29 09:41:38,888 | INFO     | PanDA job id: 7157447994
[2026-05-29 11:45:22] 2026-05-29 09:41:38,888 | INFO     | task id: 50533748
[2026-05-29 11:45:22] 2026-05-29 09:41:38,889 | INFO     | errors: (none)
[2026-05-29 11:45:22] 2026-05-29 09:41:38,889 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-29 11:45:22] 2026-05-29 09:41:38,889 | INFO     | pilot state: finished 
[2026-05-29 11:45:22] 2026-05-29 09:41:38,889 | INFO     | transexitcode: 0
[2026-05-29 11:45:22] 2026-05-29 09:41:38,889 | INFO     | exeerrorcode: 0
[2026-05-29 11:45:22] 2026-05-29 09:41:38,889 | INFO     | exeerrordiag: 
[2026-05-29 11:45:22] 2026-05-29 09:41:38,889 | INFO     | exitcode: 0
[2026-05-29 11:45:22] 2026-05-29 09:41:38,889 | INFO     | exitmsg: OK
[2026-05-29 11:45:22] 2026-05-29 09:41:38,889 | INFO     | cpuconsumptiontime: 66710 s
[2026-05-29 11:45:22] 2026-05-29 09:41:38,889 | INFO     | nevents: 400
[2026-05-29 11:45:22] 2026-05-29 09:41:38,889 | INFO     | neventsw: 0
[2026-05-29 11:45:22] 2026-05-29 09:41:38,889 | INFO     | pid: 892777
[2026-05-29 11:45:22] 2026-05-29 09:41:38,889 | INFO     | pgrp: 892777
[2026-05-29 11:45:22] 2026-05-29 09:41:38,890 | INFO     | corecount: 4
[2026-05-29 11:45:22] 2026-05-29 09:41:38,890 | INFO     | event service: False
[2026-05-29 11:45:22] 2026-05-29 09:41:38,890 | INFO     | sizes: {0: 2267714, 11: 2267714, 17354: 2300253, 17356: 2309275, 17359: 2309525}
[2026-05-29 11:45:22] 2026-05-29 09:41:38,890 | INFO     | --------------------------------------------------
[2026-05-29 11:45:22] 2026-05-29 09:41:38,890 | INFO     | 
[2026-05-29 11:45:22] 2026-05-29 09:41:38,890 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot100/slots/3
[2026-05-29 11:45:22] 2026-05-29 09:41:38,922 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-29 11:45:22] 2026-05-29 09:41:38,923 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-29 11:45:22] 2026-05-29 09:41:38,923 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-29 11:45:22] 2026-05-29 09:41:38,923 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-29 11:45:22] 2026-05-29 09:41:38,923 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-29 11:45:22] 2026-05-29 09:41:38,923 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-29 11:45:22] 2026-05-29 09:41:38,923 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-29 11:45:22] 2026-05-29 09:41:38,923 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-29 11:45:22] 2026-05-29 09:41:38,923 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-29 11:45:22] 2026-05-29 09:41:38,923 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-29 11:45:22] 2026-05-29 09:41:38,924 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-29 11:45:22] 2026-05-29 09:41:38,924 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-29 11:45:22] 2026-05-29 09:41:38,924 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-29 11:45:22] 2026-05-29 09:41:38,924 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-29 11:45:22] 2026-05-29 09:41:38,924 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-29 11:45:22] 2026-05-29 09:41:38,924 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-29 11:45:22] 2026-05-29 09:41:38,924 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-29 11:45:22] 2026-05-29 09:41:38,926 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-29 11:45:22] 2026-05-29 09:41:38,926 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-29 11:45:22] 2026-05-29 09:41:38,926 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-29 11:45:22] 2026-05-29 09:41:38,927 | INFO     | job 7157447994 has completed (purged errors)
[2026-05-29 11:45:22] 2026-05-29 09:41:38,927 | INFO     | overall cleanup function is called
[2026-05-29 11:45:22] 2026-05-29 09:41:39,864 | WARNING  | process 892777 can no longer be monitored (due to stat problems) - aborting
[2026-05-29 11:45:22] 2026-05-29 09:41:39,936 | INFO     | --- collectZombieJob: --- 10, [892777]
[2026-05-29 11:45:22] 2026-05-29 09:41:39,937 | INFO     | zombie collector waiting for pid 892777
[2026-05-29 11:45:22] 2026-05-29 09:41:39,937 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-29 11:45:22] 2026-05-29 09:41:39,937 | INFO     | collected zombie processes
[2026-05-29 11:45:22] 2026-05-29 09:41:39,937 | INFO     | will attempt to kill all subprocesses of pid=892777
[2026-05-29 11:45:22] 2026-05-29 09:41:41,166 | INFO     | using path: /var/lib/boinc/var/slot100/slots/3/memory_monitor_summary.json (trf name=prmon)
[2026-05-29 11:45:22] 2026-05-29 09:41:41,392 | INFO     | process IDs to be killed: [892777] (in reverse order)
[2026-05-29 11:45:22] 2026-05-29 09:41:41,660 | WARNING  | found no corresponding commands to process id(s)
[2026-05-29 11:45:22] 2026-05-29 09:41:41,661 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-29 11:45:22] 2026-05-29 09:41:41,730 | INFO     | did not find any defunct processes belonging to 892777
[2026-05-29 11:45:22] 2026-05-29 09:41:41,759 | INFO     | number of running child processes to parent process 892777: 1
[2026-05-29 11:45:22] 2026-05-29 09:41:41,762 | INFO     | maximum number of monitored processes: 6
[2026-05-29 11:45:22] 2026-05-29 09:41:41,762 | INFO     | aborting job monitoring since job object (job id=7157447994) has expired
[2026-05-29 11:45:22] 2026-05-29 09:41:41,774 | INFO     | did not find any defunct processes belonging to 892777
[2026-05-29 11:45:22] 2026-05-29 09:41:41,775 | INFO     | Ready for new job
[2026-05-29 11:45:22] 2026-05-29 09:41:41,777 | INFO     | ***************************************
[2026-05-29 11:45:22] 2026-05-29 09:41:41,777 | INFO     | ***  PanDA Pilot version 3.13.1.30  ***
[2026-05-29 11:45:22] 2026-05-29 09:41:41,777 | INFO     | ***************************************
[2026-05-29 11:45:22] 2026-05-29 09:41:41,777 | INFO     | 
[2026-05-29 11:45:22] 2026-05-29 09:41:41,785 | INFO     | architecture information:
[2026-05-29 11:45:22] 2026-05-29 09:41:41,785 | INFO     | executing command: cat /etc/os-release
[2026-05-29 11:45:22] 2026-05-29 09:41:41,807 | INFO     | cat /etc/os-release:
[2026-05-29 11:45:22] NAME="CentOS Linux"
[2026-05-29 11:45:22] VERSION="7 (Core)"
[2026-05-29 11:45:22] ID="centos"
[2026-05-29 11:45:22] ID_LIKE="rhel fedora"
[2026-05-29 11:45:22] VERSION_ID="7"
[2026-05-29 11:45:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-29 11:45:22] ANSI_COLOR="0;31"
[2026-05-29 11:45:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-29 11:45:22] HOME_URL="https://www.centos.org/"
[2026-05-29 11:45:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-29 11:45:22] 
[2026-05-29 11:45:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-29 11:45:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-29 11:45:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-29 11:45:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-29 11:45:22] 
[2026-05-29 11:45:22] 2026-05-29 09:41:41,807 | INFO     | ***************************************
[2026-05-29 11:45:22] 2026-05-29 09:41:42,310 | INFO     | executing command: df -mP /var/lib/boinc/var/slot100/slots/3
[2026-05-29 11:45:22] 2026-05-29 09:41:42,334 | INFO     | sufficient remaining disk space (327823654912 B)
[2026-05-29 11:45:22] 2026-05-29 09:41:42,335 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-29 11:45:22] 2026-05-29 09:41:42,335 | INFO     | current server update state: UPDATING_FINAL
[2026-05-29 11:45:22] 2026-05-29 09:41:42,335 | INFO     | update_server=False
[2026-05-29 11:45:22] 2026-05-29 09:41:42,335 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-29 11:45:22] 2026-05-29 09:41:42,335 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-29 11:45:22] 2026-05-29 09:41:42,336 | INFO     | will abort loop
[2026-05-29 11:45:22] 2026-05-29 09:41:42,336 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-29 11:45:22] 2026-05-29 09:41:42,921 | INFO     | all job control threads have been joined
[2026-05-29 11:45:22] 2026-05-29 09:41:43,220 | INFO     | all data control threads have been joined
[2026-05-29 11:45:22] 2026-05-29 09:41:43,341 | INFO     | [job] retrieve thread has finished
[2026-05-29 11:45:22] 2026-05-29 09:41:43,341 | INFO     | [job] job monitor thread has finished
[2026-05-29 11:45:22] 2026-05-29 09:41:43,712 | INFO     | all payload control threads have been joined
[2026-05-29 11:45:22] 2026-05-29 09:41:43,799 | INFO     | [job] create_data_payload thread has finished
[2026-05-29 11:45:22] 2026-05-29 09:41:43,799 | INFO     | [payload] execute_payloads thread has finished
[2026-05-29 11:45:22] 2026-05-29 09:41:43,854 | INFO     | [payload] validate_pre thread has finished
[2026-05-29 11:45:22] 2026-05-29 09:41:43,899 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-29 11:45:22] 2026-05-29 09:41:43,927 | INFO     | [job] control thread has finished
[2026-05-29 11:45:22] 2026-05-29 09:41:44,226 | INFO     | [data] control thread has finished
[2026-05-29 11:45:22] 2026-05-29 09:41:44,342 | INFO     | [data] copytool_out thread has finished
[2026-05-29 11:45:22] 2026-05-29 09:41:44,398 | INFO     | [payload] failed_post thread has finished
[2026-05-29 11:45:22] 2026-05-29 09:41:44,403 | INFO     | [payload] validate_post thread has finished
[2026-05-29 11:45:22] 2026-05-29 09:41:44,434 | INFO     | [data] copytool_in thread has finished
[2026-05-29 11:45:22] 2026-05-29 09:41:44,594 | INFO     | [job] validate thread has finished
[2026-05-29 11:45:22] 2026-05-29 09:41:44,648 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-29 11:45:22] 2026-05-29 09:41:44,718 | INFO     | [payload] control thread has finished
[2026-05-29 11:45:22] 2026-05-29 09:41:44,902 | INFO     | [job] queue monitor thread has finished
[2026-05-29 11:45:22] 2026-05-29 09:41:48,656 | INFO     | [data] queue_monitor thread has finished
[2026-05-29 11:45:22] 2026-05-29 09:41:52,465 | INFO     | job.realtimelogging is not enabled
[2026-05-29 11:45:22] 2026-05-29 09:41:53,471 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-29 11:45:22] 2026-05-29 09:42:12,500 | INFO     | PID=887162 has CPU usage=15.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-29 11:45:22] 2026-05-29 09:42:12,501 | INFO     | .. there are 7 such processes running
[2026-05-29 11:45:22] 2026-05-29 09:42:12,501 | INFO     | found 0 job(s) in 20 queues
[2026-05-29 11:45:22] 2026-05-29 09:42:12,501 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-29 11:45:22] 2026-05-29 09:42:12,501 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-29 11:45:22] 2026-05-29 09:42:35,815 | INFO     | [monitor] cgroup control has ended
[2026-05-29 11:45:22] 2026-05-29 09:42:37,537 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22523177891648)>', '<ExcThread(monitor, started 22522875606784)>']
[2026-05-29 11:45:22] 2026-05-29 09:42:37,587 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-29 11:45:22] 2026-05-29 09:42:37,588 | INFO     | [monitor] control thread has ended
[2026-05-29 11:45:22] 2026-05-29 09:42:42,562 | INFO     | all workflow threads have been joined
[2026-05-29 11:45:22] 2026-05-29 09:42:42,563 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-29 11:45:22] 2026-05-29 09:42:42,563 | INFO     | traces error code: 0
[2026-05-29 11:45:22] 2026-05-29 09:42:42,563 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-29 11:45:22] 2026-05-29 09:42:42,755 [wrapper] ==== pilot stdout END ====
[2026-05-29 11:45:22] 2026-05-29 09:42:42,759 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-29 11:45:22] 2026-05-29 09:42:42,763 [wrapper] pilotpid: 887162
[2026-05-29 11:45:22] 2026-05-29 09:42:42,769 [wrapper] Pilot exit status: 0
[2026-05-29 11:45:22] 2026-05-29 09:42:42,785 [wrapper] pandaids: 7157447994
[2026-05-29 11:45:22] 2026-05-29 09:42:42,973 [wrapper] cleanup supervisor_pilot 1279504 887163
[2026-05-29 11:45:22] 2026-05-29 09:42:42,977 [wrapper] Test setup, not cleaning
[2026-05-29 11:45:22] 2026-05-29 09:42:42,981 [wrapper] apfmon messages muted
[2026-05-29 11:45:22] 2026-05-29 09:42:42,984 [wrapper] ==== wrapper stdout END ====
[2026-05-29 11:45:22] 2026-05-29 09:42:42,988 [wrapper] ==== wrapper stderr END ====
[2026-05-29 11:45:22]  *** Error codes and diagnostics ***
[2026-05-29 11:45:22]     "exeErrorCode": 0,
[2026-05-29 11:45:22]     "pilotErrorCode": 0,
[2026-05-29 11:45:22]  *** Listing of results directory ***
[2026-05-29 11:45:22] total 516280
[2026-05-29 11:45:22] -rw-r--r--. 1 boinc boinc    709501 May 29 02:20 pilot3.tar.gz
[2026-05-29 11:45:22] -rw-r--r--. 1 boinc boinc      5631 May 29 02:22 queuedata.json
[2026-05-29 11:45:22] -rwx------. 1 boinc boinc     36281 May 29 02:23 runpilot2-wrapper.sh
[2026-05-29 11:45:22] -rw-r--r--. 1 boinc boinc       100 May 29 06:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-29 11:45:22] -rwxr-xr-x. 1 boinc boinc      7986 May 29 06:51 run_atlas
[2026-05-29 11:45:22] -rw-r--r--. 1 boinc boinc       105 May 29 06:51 job.xml
[2026-05-29 11:45:22] -rw-r--r--. 1 boinc boinc      6543 May 29 06:51 init_data.xml
[2026-05-29 11:45:22] -rw-r--r--. 2 boinc boinc 265417909 May 29 06:51 EVNT.50469639._000027.pool.root.1
[2026-05-29 11:45:22] -rw-r--r--. 2 boinc boinc     15667 May 29 06:51 start_atlas.sh
[2026-05-29 11:45:22] drwxrwx--x. 2 boinc boinc      4096 May 29 06:51 shared
[2026-05-29 11:45:22] -rw-r--r--. 2 boinc boinc    722755 May 29 06:51 input.tar.gz
[2026-05-29 11:45:22] -rw-r--r--. 1 boinc boinc         0 May 29 06:51 boinc_lockfile
[2026-05-29 11:45:22] -rw-r--r--. 1 boinc boinc      2616 May 29 06:51 pandaJob.out
[2026-05-29 11:45:22] -rw-------. 1 boinc boinc    996138 May 29 06:51 agis_schedconf.cvmfs.json
[2026-05-29 11:45:22] -rw-------. 1 boinc boinc   1251485 May 29 06:52 cric_ddmendpoints.json
[2026-05-29 11:45:22] -rw-------. 1 boinc boinc       443 May 29 06:52 workernode_map.json
[2026-05-29 11:45:22] drwx------. 5 boinc boinc      4096 May 29 06:52 pilot3
[2026-05-29 11:45:22] -rw-------. 1 boinc boinc 255408740 May 29 11:41 HITS.50533748._000662.pool.root.1
[2026-05-29 11:45:22] -rw-r--r--. 1 boinc boinc       488 May 29 11:41 boinc_task_state.xml
[2026-05-29 11:45:22] -rw-------. 1 boinc boinc        95 May 29 11:41 pilot_heartbeat.json
[2026-05-29 11:45:22] -rw-------. 1 boinc boinc      1035 May 29 11:41 memory_monitor_summary.json
[2026-05-29 11:45:22] -rw-------. 1 boinc boinc         0 May 29 11:41 agis_ddmendpoints.agis.ALL.json
[2026-05-29 11:45:22] -rw-------. 1 boinc boinc    363923 May 29 11:41 log.50533748._000662.job.log.tgz.1
[2026-05-29 11:45:22] -rw-------. 1 boinc boinc      6420 May 29 11:41 heartbeat_new.json
[2026-05-29 11:45:22] -rw-------. 1 boinc boinc      6311 May 29 11:41 heartbeat.json
[2026-05-29 11:45:22] -rw-------. 1 boinc boinc      4907 May 29 11:42 pilotlog.txt
[2026-05-29 11:45:22] -rw-------. 1 boinc boinc   1592624 May 29 11:42 log.50533748._000662.job.log.1
[2026-05-29 11:45:22] -rw-------. 1 boinc boinc       357 May 29 11:42 output.list
[2026-05-29 11:45:22] -rw-r--r--. 1 boinc boinc       410 May 29 11:42 runtime_log
[2026-05-29 11:45:22] -rw-------. 1 boinc boinc   1976320 May 29 11:42 result.tar.gz
[2026-05-29 11:45:22] -rw-r--r--. 1 boinc boinc      8845 May 29 11:42 runtime_log.err
[2026-05-29 11:45:22] -rw-------. 1 boinc boinc       666 May 29 11:42 dc911aec7aeb.diag
[2026-05-29 11:45:22] -rw-r--r--. 1 boinc boinc        27 May 29 11:45 wrapper_checkpoint.txt
[2026-05-29 11:45:22] -rw-r--r--. 1 boinc boinc      8192 May 29 11:45 boinc_mmap_file
[2026-05-29 11:45:22] -rw-r--r--. 1 boinc boinc     20768 May 29 11:45 stderr.txt
[2026-05-29 11:45:22] HITS file was successfully produced:
[2026-05-29 11:45:22] -rw-------. 1 boinc boinc 255408740 May 29 11:41 shared/HITS.pool.root.1
[2026-05-29 11:45:22]  *** Contents of shared directory: ***
[2026-05-29 11:45:22] total 511288
[2026-05-29 11:45:22] -rw-r--r--. 2 boinc boinc 265417909 May 29 06:51 ATLAS.root_0
[2026-05-29 11:45:22] -rw-r--r--. 2 boinc boinc     15667 May 29 06:51 start_atlas.sh
[2026-05-29 11:45:22] -rw-r--r--. 2 boinc boinc    722755 May 29 06:51 input.tar.gz
[2026-05-29 11:45:22] -rw-------. 1 boinc boinc 255408740 May 29 11:41 HITS.pool.root.1
[2026-05-29 11:45:22] -rw-------. 1 boinc boinc   1976320 May 29 11:42 result.tar.gz
11:45:24 (883048): run_atlas exited; CPU time 67800.232909
11:45:24 (883048): called boinc_finish(0)

</stderr_txt>
]]>

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