Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:24:32 (2902017): wrapper (7.7.26015): starting
06:24:32 (2902017): wrapper: running run_atlas (--nthreads 4)
[2026-05-29 06:24:32] Arguments: --nthreads 4
[2026-05-29 06:24:32] Threads: 4
[2026-05-29 06:24:32] Checking for CVMFS
[2026-05-29 06:24:32] No cvmfs_config command found, will try listing directly
[2026-05-29 06:24:32] CVMFS is ok
[2026-05-29 06:24:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-29 06:24:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-29 06:24:32] Further information can be found at the LHC@home message board.
[2026-05-29 06:24:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-29 06:24:32] Checking for apptainer binary...
[2026-05-29 06:24:32] which: no apptainer in ((null))
[2026-05-29 06:24:32] apptainer is not installed, using version from CVMFS
[2026-05-29 06:24:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-29 06:24:33] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot32/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2026-05-29 06:24:33] apptainer works
[2026-05-29 06:24:33] Set ATHENA_PROC_NUMBER=4
[2026-05-29 06:24:33] Set ATHENA_CORE_NUMBER=4
[2026-05-29 06:24:33] Starting ATLAS job with PandaID=7157448430
[2026-05-29 06:24:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot32/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-29 09:52:56]  *** The last 200 lines of the pilot log: ***
[2026-05-29 09:52:56] 2026-05-29 07:47:34,695 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-29 09:52:56] 2026-05-29 07:47:36,635 | INFO     | monitor loop #892: job 0:7157448430 is in state 'finished'
[2026-05-29 09:52:56] 2026-05-29 07:47:36,635 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-29 09:52:56] 2026-05-29 07:47:37,176 | INFO     | job 7157448430 has state=finished
[2026-05-29 09:52:56] 2026-05-29 07:47:37,176 | INFO     | preparing for final server update for job 7157448430 in state='finished'
[2026-05-29 09:52:56] 2026-05-29 07:47:37,176 | INFO     | reading metadata from: /var/lib/boinc/var/slot32/slots/1/PanDA_Pilot-7157448430/jobReport.json
[2026-05-29 09:52:56] 2026-05-29 07:47:37,180 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot32/slots/1/workernode_map.json
[2026-05-29 09:52:56] 2026-05-29 07:47:37,180 | INFO     | this job has now completed (state=finished)
[2026-05-29 09:52:56] 2026-05-29 07:47:37,180 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-29 09:52:56] 2026-05-29 07:47:37,181 | INFO     | log transfer has been attempted: DONE
[2026-05-29 09:52:56] 2026-05-29 07:47:37,181 | INFO     | job 7157448430 has finished - writing final server update
[2026-05-29 09:52:56] 2026-05-29 07:47:37,181 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1219202/.job.ad'
[2026-05-29 09:52:56] 2026-05-29 07:47:37,181 | INFO     | total number of processed events: 400 (read)
[2026-05-29 09:52:56] 2026-05-29 07:47:37,195 | INFO     | using path: /var/lib/boinc/var/slot32/slots/1/PanDA_Pilot-7157448430/memory_monitor_summary.json (trf name=prmon)
[2026-05-29 09:52:56] 2026-05-29 07:47:37,195 | INFO     | extracted standard info from prmon json
[2026-05-29 09:52:56] 2026-05-29 07:47:37,196 | INFO     | extracted standard memory fields from prmon json
[2026-05-29 09:52:56] 2026-05-29 07:47:37,196 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-29 09:52:56] 2026-05-29 07:47:37,196 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-29 09:52:56] 2026-05-29 07:47:37,200 | INFO     | fitting pss+swap vs Time
[2026-05-29 09:52:56] 2026-05-29 07:47:37,201 | INFO     | sum of square deviations: 2443580700.0
[2026-05-29 09:52:56] 2026-05-29 07:47:37,202 | INFO     | sum of deviations: -45172151941.0
[2026-05-29 09:52:56] 2026-05-29 07:47:37,203 | INFO     | mean x (centered): 0.0
[2026-05-29 09:52:56] 2026-05-29 07:47:37,203 | INFO     | mean y: 2423630.351758794
[2026-05-29 09:52:56] 2026-05-29 07:47:37,203 | INFO     | intersect: 2423630.351758794
[2026-05-29 09:52:56] 2026-05-29 07:47:37,203 | INFO     | chi2: 1.6240123062892025
[2026-05-29 09:52:56] 2026-05-29 07:47:37,204 | INFO     | sum of square deviations: 2263977332.5
[2026-05-29 09:52:56] 2026-05-29 07:47:37,205 | INFO     | sum of deviations: -43696082175.99999
[2026-05-29 09:52:56] 2026-05-29 07:47:37,205 | INFO     | mean x (centered): 0.0
[2026-05-29 09:52:56] 2026-05-29 07:47:37,205 | INFO     | mean y: 2424883.93814433
[2026-05-29 09:52:56] 2026-05-29 07:47:37,206 | INFO     | intersect: 2424883.93814433
[2026-05-29 09:52:56] 2026-05-29 07:47:37,206 | INFO     | chi2: 1.6169502436441587
[2026-05-29 09:52:56] 2026-05-29 07:47:37,206 | INFO     | current chi2=1.6169502436441587 (change=0.4348527789903407 %)
[2026-05-29 09:52:56] 2026-05-29 07:47:37,206 | INFO     | right removable region: 193
[2026-05-29 09:52:56] 2026-05-29 07:47:37,207 | INFO     | sum of square deviations: 2263977332.5
[2026-05-29 09:52:56] 2026-05-29 07:47:37,208 | INFO     | sum of deviations: -67582692115.49999
[2026-05-29 09:52:56] 2026-05-29 07:47:37,208 | INFO     | mean x (centered): 0.0
[2026-05-29 09:52:56] 2026-05-29 07:47:37,208 | INFO     | mean y: 2442348.8608247424
[2026-05-29 09:52:56] 2026-05-29 07:47:37,208 | INFO     | intersect: 2442348.8608247424
[2026-05-29 09:52:56] 2026-05-29 07:47:37,209 | INFO     | chi2: 0.34007667375510225
[2026-05-29 09:52:56] 2026-05-29 07:47:37,209 | INFO     | current chi2=0.34007667375510225 (change=79.05947680087705 %)
[2026-05-29 09:52:56] 2026-05-29 07:47:37,209 | INFO     | sum of square deviations: 2093397390.0
[2026-05-29 09:52:56] 2026-05-29 07:47:37,211 | INFO     | sum of deviations: -59523106674.0
[2026-05-29 09:52:56] 2026-05-29 07:47:37,211 | INFO     | mean x (centered): 0.0
[2026-05-29 09:52:56] 2026-05-29 07:47:37,211 | INFO     | mean y: 2435137.9735449734
[2026-05-29 09:52:56] 2026-05-29 07:47:37,211 | INFO     | intersect: 2435137.9735449734
[2026-05-29 09:52:56] 2026-05-29 07:47:37,212 | INFO     | chi2: 0.33144420035021604
[2026-05-29 09:52:56] 2026-05-29 07:47:37,212 | INFO     | current chi2=0.33144420035021604 (change=2.5383903310882974 %)
[2026-05-29 09:52:56] 2026-05-29 07:47:37,212 | INFO     | left removable region: 10
[2026-05-29 09:52:56] 2026-05-29 07:47:37,212 | INFO     | sum of square deviations: 1900284932.0
[2026-05-29 09:52:56] 2026-05-29 07:47:37,214 | INFO     | sum of deviations: -57443500651.99999
[2026-05-29 09:52:56] 2026-05-29 07:47:37,214 | INFO     | mean x (centered): 0.0
[2026-05-29 09:52:56] 2026-05-29 07:47:37,214 | INFO     | mean y: 2437109.3333333335
[2026-05-29 09:52:56] 2026-05-29 07:47:37,214 | INFO     | intersect: 2437109.3333333335
[2026-05-29 09:52:56] 2026-05-29 07:47:37,214 | INFO     | chi2: 0.3207015253881061
[2026-05-29 09:52:56] 2026-05-29 07:47:37,215 | INFO     | current memory leak: -30.23 B/s (using 183 data points, chi2=0.32)
[2026-05-29 09:52:56] 2026-05-29 07:47:37,215 | INFO     | could have reported an average CPU frequency of 2612 MHz (10 samples)
[2026-05-29 09:52:56] 2026-05-29 07:47:37,216 | INFO     | ..............................
[2026-05-29 09:52:56] 2026-05-29 07:47:37,216 | INFO     | . Timing measurements:
[2026-05-29 09:52:56] 2026-05-29 07:47:37,216 | INFO     | . get job = 0 s
[2026-05-29 09:52:56] 2026-05-29 07:47:37,216 | INFO     | . initial setup = 5 s
[2026-05-29 09:52:56] 2026-05-29 07:47:37,216 | INFO     | . payload setup = 10 s
[2026-05-29 09:52:56] 2026-05-29 07:47:37,216 | INFO     | . stage-in = 0 s
[2026-05-29 09:52:56] 2026-05-29 07:47:37,216 | INFO     | . payload execution = 12136 s
[2026-05-29 09:52:56] 2026-05-29 07:47:37,216 | INFO     | . stage-out = 1 s
[2026-05-29 09:52:56] 2026-05-29 07:47:37,217 | INFO     | . log creation = 0 s
[2026-05-29 09:52:56] 2026-05-29 07:47:37,217 | INFO     | ..............................
[2026-05-29 09:52:56] 2026-05-29 07:47:37,331 | INFO     | 
[2026-05-29 09:52:56] 2026-05-29 07:47:37,331 | INFO     | job summary report
[2026-05-29 09:52:56] 2026-05-29 07:47:37,331 | INFO     | --------------------------------------------------
[2026-05-29 09:52:56] 2026-05-29 07:47:37,331 | INFO     | PanDA job id: 7157448430
[2026-05-29 09:52:56] 2026-05-29 07:47:37,331 | INFO     | task id: 50533925
[2026-05-29 09:52:56] 2026-05-29 07:47:37,332 | INFO     | errors: (none)
[2026-05-29 09:52:56] 2026-05-29 07:47:37,332 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-29 09:52:56] 2026-05-29 07:47:37,332 | INFO     | pilot state: finished 
[2026-05-29 09:52:56] 2026-05-29 07:47:37,333 | INFO     | transexitcode: 0
[2026-05-29 09:52:56] 2026-05-29 07:47:37,333 | INFO     | exeerrorcode: 0
[2026-05-29 09:52:56] 2026-05-29 07:47:37,333 | INFO     | exeerrordiag: 
[2026-05-29 09:52:56] 2026-05-29 07:47:37,333 | INFO     | exitcode: 0
[2026-05-29 09:52:56] 2026-05-29 07:47:37,333 | INFO     | exitmsg: OK
[2026-05-29 09:52:56] 2026-05-29 07:47:37,333 | INFO     | cpuconsumptiontime: 46873 s
[2026-05-29 09:52:56] 2026-05-29 07:47:37,333 | INFO     | nevents: 400
[2026-05-29 09:52:56] 2026-05-29 07:47:37,333 | INFO     | neventsw: 0
[2026-05-29 09:52:56] 2026-05-29 07:47:37,333 | INFO     | pid: 2911242
[2026-05-29 09:52:56] 2026-05-29 07:47:37,333 | INFO     | pgrp: 2911242
[2026-05-29 09:52:56] 2026-05-29 07:47:37,333 | INFO     | corecount: 4
[2026-05-29 09:52:56] 2026-05-29 07:47:37,333 | INFO     | event service: False
[2026-05-29 09:52:56] 2026-05-29 07:47:37,333 | INFO     | sizes: {0: 2265097, 1: 2267594, 12: 2267594, 12150: 2297079, 12152: 2306099, 12153: 2306155, 12155: 2306477}
[2026-05-29 09:52:56] 2026-05-29 07:47:37,333 | INFO     | --------------------------------------------------
[2026-05-29 09:52:56] 2026-05-29 07:47:37,334 | INFO     | 
[2026-05-29 09:52:56] 2026-05-29 07:47:37,334 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot32/slots/1
[2026-05-29 09:52:56] 2026-05-29 07:47:37,358 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-29 09:52:56] 2026-05-29 07:47:37,358 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-29 09:52:56] 2026-05-29 07:47:37,358 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-29 09:52:56] 2026-05-29 07:47:37,358 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-29 09:52:56] 2026-05-29 07:47:37,358 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-29 09:52:56] 2026-05-29 07:47:37,359 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-29 09:52:56] 2026-05-29 07:47:37,359 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-29 09:52:56] 2026-05-29 07:47:37,359 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-29 09:52:56] 2026-05-29 07:47:37,359 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-29 09:52:56] 2026-05-29 07:47:37,359 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-29 09:52:56] 2026-05-29 07:47:37,359 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-29 09:52:56] 2026-05-29 07:47:37,359 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-29 09:52:56] 2026-05-29 07:47:37,359 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-29 09:52:56] 2026-05-29 07:47:37,359 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-29 09:52:56] 2026-05-29 07:47:37,359 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-29 09:52:56] 2026-05-29 07:47:37,359 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-29 09:52:56] 2026-05-29 07:47:37,359 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-29 09:52:56] 2026-05-29 07:47:37,359 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-29 09:52:56] 2026-05-29 07:47:37,360 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-29 09:52:56] 2026-05-29 07:47:37,360 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-29 09:52:56] 2026-05-29 07:47:37,360 | INFO     | job 7157448430 has completed (purged errors)
[2026-05-29 09:52:56] 2026-05-29 07:47:37,360 | INFO     | overall cleanup function is called
[2026-05-29 09:52:56] 2026-05-29 07:47:38,368 | INFO     | --- collectZombieJob: --- 10, [2911242]
[2026-05-29 09:52:56] 2026-05-29 07:47:38,368 | INFO     | zombie collector waiting for pid 2911242
[2026-05-29 09:52:56] 2026-05-29 07:47:38,369 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-29 09:52:56] 2026-05-29 07:47:38,369 | INFO     | collected zombie processes
[2026-05-29 09:52:56] 2026-05-29 07:47:38,369 | INFO     | will attempt to kill all subprocesses of pid=2911242
[2026-05-29 09:52:56] 2026-05-29 07:47:38,656 | INFO     | process IDs to be killed: [2911242] (in reverse order)
[2026-05-29 09:52:56] 2026-05-29 07:47:38,776 | WARNING  | found no corresponding commands to process id(s)
[2026-05-29 09:52:56] 2026-05-29 07:47:38,776 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-29 09:52:56] 2026-05-29 07:47:38,789 | INFO     | did not find any defunct processes belonging to 2911242
[2026-05-29 09:52:56] 2026-05-29 07:47:38,801 | INFO     | did not find any defunct processes belonging to 2911242
[2026-05-29 09:52:56] 2026-05-29 07:47:38,801 | INFO     | Ready for new job
[2026-05-29 09:52:56] 2026-05-29 07:47:38,803 | INFO     | ***************************************
[2026-05-29 09:52:56] 2026-05-29 07:47:38,803 | INFO     | ***  PanDA Pilot version 3.13.1.30  ***
[2026-05-29 09:52:56] 2026-05-29 07:47:38,803 | INFO     | ***************************************
[2026-05-29 09:52:56] 2026-05-29 07:47:38,803 | INFO     | 
[2026-05-29 09:52:56] 2026-05-29 07:47:38,807 | INFO     | architecture information:
[2026-05-29 09:52:56] 2026-05-29 07:47:38,807 | INFO     | executing command: cat /etc/os-release
[2026-05-29 09:52:56] 2026-05-29 07:47:38,823 | INFO     | cat /etc/os-release:
[2026-05-29 09:52:56] NAME="CentOS Linux"
[2026-05-29 09:52:56] VERSION="7 (Core)"
[2026-05-29 09:52:56] ID="centos"
[2026-05-29 09:52:56] ID_LIKE="rhel fedora"
[2026-05-29 09:52:56] VERSION_ID="7"
[2026-05-29 09:52:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-29 09:52:56] ANSI_COLOR="0;31"
[2026-05-29 09:52:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-29 09:52:56] HOME_URL="https://www.centos.org/"
[2026-05-29 09:52:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-29 09:52:56] 
[2026-05-29 09:52:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-29 09:52:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-29 09:52:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-29 09:52:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-29 09:52:56] 
[2026-05-29 09:52:56] 2026-05-29 07:47:38,824 | INFO     | ***************************************
[2026-05-29 09:52:56] 2026-05-29 07:47:39,327 | INFO     | executing command: df -mP /var/lib/boinc/var/slot32/slots/1
[2026-05-29 09:52:56] 2026-05-29 07:47:39,346 | INFO     | sufficient remaining disk space (65029537792 B)
[2026-05-29 09:52:56] 2026-05-29 07:47:39,346 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-29 09:52:56] 2026-05-29 07:47:39,346 | INFO     | current server update state: UPDATING_FINAL
[2026-05-29 09:52:56] 2026-05-29 07:47:39,346 | INFO     | update_server=False
[2026-05-29 09:52:56] 2026-05-29 07:47:39,346 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-29 09:52:56] 2026-05-29 07:47:39,568 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-29 09:52:56] 2026-05-29 07:47:39,766 | INFO     | all job control threads have been joined
[2026-05-29 09:52:56] 2026-05-29 07:47:40,143 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-29 09:52:56] 2026-05-29 07:47:40,144 | INFO     | aborting loop
[2026-05-29 09:52:56] 2026-05-29 07:47:40,190 | INFO     | all data control threads have been joined
[2026-05-29 09:52:56] 2026-05-29 07:47:40,351 | INFO     | [job] retrieve thread has finished
[2026-05-29 09:52:56] 2026-05-29 07:47:40,427 | INFO     | [job] create_data_payload thread has finished
[2026-05-29 09:52:56] 2026-05-29 07:47:40,545 | INFO     | [payload] execute_payloads thread has finished
[2026-05-29 09:52:56] 2026-05-29 07:47:40,756 | INFO     | all payload control threads have been joined
[2026-05-29 09:52:56] 2026-05-29 07:47:40,761 | INFO     | [data] copytool_in thread has finished
[2026-05-29 09:52:56] 2026-05-29 07:47:40,772 | INFO     | [job] control thread has finished
[2026-05-29 09:52:56] 2026-05-29 07:47:40,796 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-29 09:52:56] 2026-05-29 07:47:40,970 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-29 09:52:56] 2026-05-29 07:47:41,149 | INFO     | [job] job monitor thread has finished
[2026-05-29 09:52:56] 2026-05-29 07:47:41,162 | INFO     | [payload] failed_post thread has finished
[2026-05-29 09:52:56] 2026-05-29 07:47:41,196 | INFO     | [data] control thread has finished
[2026-05-29 09:52:56] 2026-05-29 07:47:41,556 | INFO     | [payload] validate_post thread has finished
[2026-05-29 09:52:56] 2026-05-29 07:47:41,573 | INFO     | [data] copytool_out thread has finished
[2026-05-29 09:52:56] 2026-05-29 07:47:41,633 | INFO     | [job] validate thread has finished
[2026-05-29 09:52:56] 2026-05-29 07:47:41,759 | INFO     | [payload] control thread has finished
[2026-05-29 09:52:56] 2026-05-29 07:47:41,787 | INFO     | [payload] validate_pre thread has finished
[2026-05-29 09:52:56] 2026-05-29 07:47:42,342 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-29 09:52:56] 2026-05-29 07:47:43,347 | INFO     | [job] queue monitor thread has finished
[2026-05-29 09:52:56] 2026-05-29 07:47:44,803 | INFO     | [data] queue_monitor thread has finished
[2026-05-29 09:52:56] 2026-05-29 07:48:09,790 | INFO     | PID=2906139 has CPU usage=8.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-29 09:52:56] 2026-05-29 07:48:09,790 | INFO     | .. there are 8 such processes running
[2026-05-29 09:52:56] 2026-05-29 07:48:09,790 | INFO     | found 0 job(s) in 20 queues
[2026-05-29 09:52:56] 2026-05-29 07:48:09,790 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-29 09:52:56] 2026-05-29 07:48:09,790 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-29 09:52:56] 2026-05-29 07:48:09,928 | INFO     | [monitor] cgroup control has ended
[2026-05-29 09:52:56] 2026-05-29 07:48:10,160 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22906423547712)>', '<ExcThread(monitor, started 22906121721600)>']
[2026-05-29 09:52:56] 2026-05-29 07:48:10,795 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-29 09:52:56] 2026-05-29 07:48:10,796 | INFO     | [monitor] control thread has ended
[2026-05-29 09:52:56] 2026-05-29 07:48:15,186 | INFO     | all workflow threads have been joined
[2026-05-29 09:52:56] 2026-05-29 07:48:15,186 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-29 09:52:56] 2026-05-29 07:48:15,186 | INFO     | traces error code: 0
[2026-05-29 09:52:56] 2026-05-29 07:48:15,187 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-29 09:52:56] 2026-05-29 07:48:15,352 [wrapper] ==== pilot stdout END ====
[2026-05-29 09:52:56] 2026-05-29 07:48:15,355 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-29 09:52:56] 2026-05-29 07:48:15,359 [wrapper] pilotpid: 2906139
[2026-05-29 09:52:56] 2026-05-29 07:48:15,362 [wrapper] Pilot exit status: 0
[2026-05-29 09:52:56] 2026-05-29 07:48:15,374 [wrapper] pandaids: 7157448430
[2026-05-29 09:52:56] 2026-05-29 07:48:15,451 [wrapper] cleanup supervisor_pilot 3105788 2906140
[2026-05-29 09:52:56] 2026-05-29 07:48:15,454 [wrapper] Test setup, not cleaning
[2026-05-29 09:52:56] 2026-05-29 07:48:15,457 [wrapper] apfmon messages muted
[2026-05-29 09:52:56] 2026-05-29 07:48:15,459 [wrapper] ==== wrapper stdout END ====
[2026-05-29 09:52:56] 2026-05-29 07:48:15,462 [wrapper] ==== wrapper stderr END ====
[2026-05-29 09:52:56]  *** Error codes and diagnostics ***
[2026-05-29 09:52:56]     "exeErrorCode": 0,
[2026-05-29 09:52:56]     "pilotErrorCode": 0,
[2026-05-29 09:52:56]  *** Listing of results directory ***
[2026-05-29 09:52:56] total 511264
[2026-05-29 09:52:56] -rw-r--r--. 1 boinc boinc      5631 May 29 02:20 queuedata.json
[2026-05-29 09:52:56] -rw-r--r--. 1 boinc boinc    709501 May 29 02:20 pilot3.tar.gz
[2026-05-29 09:52:56] -rwx------. 1 boinc boinc     36281 May 29 02:21 runpilot2-wrapper.sh
[2026-05-29 09:52:56] -rw-r--r--. 1 boinc boinc       100 May 29 06:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-29 09:52:56] -rwxr-xr-x. 1 boinc boinc      7986 May 29 06:24 run_atlas
[2026-05-29 09:52:56] -rw-r--r--. 1 boinc boinc       105 May 29 06:24 job.xml
[2026-05-29 09:52:56] -rw-r--r--. 1 boinc boinc      6482 May 29 06:24 init_data.xml
[2026-05-29 09:52:56] -rw-r--r--. 2 boinc boinc 298142908 May 29 06:24 EVNT.50469837._000018.pool.root.1
[2026-05-29 09:52:56] -rw-r--r--. 2 boinc boinc     15667 May 29 06:24 start_atlas.sh
[2026-05-29 09:52:56] drwxrwx--x. 2 boinc boinc      4096 May 29 06:24 shared
[2026-05-29 09:52:56] -rw-r--r--. 2 boinc boinc    722729 May 29 06:24 input.tar.gz
[2026-05-29 09:52:56] -rw-r--r--. 1 boinc boinc         0 May 29 06:24 boinc_lockfile
[2026-05-29 09:52:56] -rw-r--r--. 1 boinc boinc      2511 May 29 06:24 pandaJob.out
[2026-05-29 09:52:56] -rw-------. 1 boinc boinc    996138 May 29 06:24 agis_schedconf.cvmfs.json
[2026-05-29 09:52:56] -rw-------. 1 boinc boinc   1251485 May 29 06:24 cric_ddmendpoints.json
[2026-05-29 09:52:56] -rw-------. 1 boinc boinc       448 May 29 06:24 workernode_map.json
[2026-05-29 09:52:56] drwx------. 5 boinc boinc      4096 May 29 06:24 pilot3
[2026-05-29 09:52:56] -rw-------. 1 boinc boinc 218549610 May 29 09:46 HITS.50533925._000431.pool.root.1
[2026-05-29 09:52:56] -rw-------. 1 boinc boinc        95 May 29 09:47 pilot_heartbeat.json
[2026-05-29 09:52:56] -rw-r--r--. 1 boinc boinc       487 May 29 09:47 boinc_task_state.xml
[2026-05-29 09:52:56] -rw-------. 1 boinc boinc      1035 May 29 09:47 memory_monitor_summary.json
[2026-05-29 09:52:56] -rw-------. 1 boinc boinc         0 May 29 09:47 agis_ddmendpoints.agis.ALL.json
[2026-05-29 09:52:56] -rw-------. 1 boinc boinc    310062 May 29 09:47 log.50533925._000431.job.log.tgz.1
[2026-05-29 09:52:56] -rw-------. 1 boinc boinc      6464 May 29 09:47 heartbeat_new.json
[2026-05-29 09:52:56] -rw-------. 1 boinc boinc      6355 May 29 09:47 heartbeat.json
[2026-05-29 09:52:56] -rw-------. 1 boinc boinc      4831 May 29 09:48 pilotlog.txt
[2026-05-29 09:52:56] -rw-------. 1 boinc boinc   1149014 May 29 09:48 log.50533925._000431.job.log.1
[2026-05-29 09:52:56] -rw-------. 1 boinc boinc       357 May 29 09:48 output.list
[2026-05-29 09:52:56] -rw-r--r--. 1 boinc boinc       410 May 29 09:48 runtime_log
[2026-05-29 09:52:56] -rw-------. 1 boinc boinc   1474560 May 29 09:48 result.tar.gz
[2026-05-29 09:52:56] -rw-r--r--. 1 boinc boinc      8828 May 29 09:48 runtime_log.err
[2026-05-29 09:52:56] -rw-------. 1 boinc boinc       665 May 29 09:48 dbec4f648a95.diag
[2026-05-29 09:52:56] -rw-r--r--. 1 boinc boinc        27 May 29 09:52 wrapper_checkpoint.txt
[2026-05-29 09:52:56] -rw-r--r--. 1 boinc boinc      8192 May 29 09:52 boinc_mmap_file
[2026-05-29 09:52:56] -rw-r--r--. 1 boinc boinc     21103 May 29 09:52 stderr.txt
[2026-05-29 09:52:56] HITS file was successfully produced:
[2026-05-29 09:52:56] -rw-------. 1 boinc boinc 218549610 May 29 09:46 shared/HITS.pool.root.1
[2026-05-29 09:52:56]  *** Contents of shared directory: ***
[2026-05-29 09:52:56] total 506756
[2026-05-29 09:52:56] -rw-r--r--. 2 boinc boinc 298142908 May 29 06:24 ATLAS.root_0
[2026-05-29 09:52:56] -rw-r--r--. 2 boinc boinc     15667 May 29 06:24 start_atlas.sh
[2026-05-29 09:52:56] -rw-r--r--. 2 boinc boinc    722729 May 29 06:24 input.tar.gz
[2026-05-29 09:52:56] -rw-------. 1 boinc boinc 218549610 May 29 09:46 HITS.pool.root.1
[2026-05-29 09:52:56] -rw-------. 1 boinc boinc   1474560 May 29 09:48 result.tar.gz
09:52:58 (2902017): run_atlas exited; CPU time 47317.825250
09:52:58 (2902017): called boinc_finish(0)

</stderr_txt>
]]>

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