Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:09:06 (16076): wrapper (7.7.26015): starting
06:09:06 (16076): wrapper: running run_atlas (--nthreads 8)
[2026-05-29 06:09:06] Arguments: --nthreads 8
[2026-05-29 06:09:06] Threads: 8
[2026-05-29 06:09:06] Checking for CVMFS
[2026-05-29 06:09:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-29 06:09:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-29 06:09:06] Running cvmfs_config stat atlas.cern.ch
[2026-05-29 06:09:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-29 06:09:07] 2.11.2.0 28827 62600 125656 159919 2 240 24195828 25165825 316 130560 0 25610913 99.884 19060637 6201 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-29 06:09:07] CVMFS is ok
[2026-05-29 06:09:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-29 06:09:07] Checking for apptainer binary...
[2026-05-29 06:09:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-29 06:09:07] Running /usr/bin/apptainer --version
[2026-05-29 06:09:07] apptainer version 1.3.2-1.el7
[2026-05-29 06:09:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-29 06:09:08] cg-vwn243.simple-grid.lan
[2026-05-29 06:09:08] apptainer works
[2026-05-29 06:09:08] Set ATHENA_PROC_NUMBER=8
[2026-05-29 06:09:08] Set ATHENA_CORE_NUMBER=8
[2026-05-29 06:09:08] Starting ATLAS job with PandaID=7157314833
[2026-05-29 06:09:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-29 08:46:00]  *** The last 200 lines of the pilot log: ***
[2026-05-29 08:46:01] 2026-05-29 06:44:45,257 | INFO     | job 7157314833 has finished - writing final server update
[2026-05-29 08:46:01] 2026-05-29 06:44:45,257 | INFO     | total number of processed events: 400 (read)
[2026-05-29 08:46:01] 2026-05-29 06:44:45,259 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-7157314833/memory_monitor_summary.json (trf name=prmon)
[2026-05-29 08:46:01] 2026-05-29 06:44:45,260 | INFO     | extracted standard info from prmon json
[2026-05-29 08:46:01] 2026-05-29 06:44:45,260 | INFO     | extracted standard memory fields from prmon json
[2026-05-29 08:46:01] 2026-05-29 06:44:45,261 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-29 08:46:01] 2026-05-29 06:44:45,261 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-29 08:46:01] 2026-05-29 06:44:45,264 | INFO     | fitting pss+swap vs Time
[2026-05-29 08:46:01] 2026-05-29 06:44:45,265 | INFO     | sum of square deviations: 1110539892.0
[2026-05-29 08:46:01] 2026-05-29 06:44:45,266 | INFO     | sum of deviations: 9799435097.0
[2026-05-29 08:46:01] 2026-05-29 06:44:45,266 | INFO     | mean x (centered): 0.0
[2026-05-29 08:46:01] 2026-05-29 06:44:45,266 | INFO     | mean y: 2449893.6601307187
[2026-05-29 08:46:01] 2026-05-29 06:44:45,267 | INFO     | intersect: 2449893.6601307187
[2026-05-29 08:46:01] 2026-05-29 06:44:45,267 | INFO     | chi2: 3.183191375759267
[2026-05-29 08:46:01] 2026-05-29 06:44:45,267 | INFO     | sum of square deviations: 1005179777.0
[2026-05-29 08:46:01] 2026-05-29 06:44:45,268 | INFO     | sum of deviations: 29427202211.0
[2026-05-29 08:46:01] 2026-05-29 06:44:45,269 | INFO     | mean x (centered): 0.0
[2026-05-29 08:46:01] 2026-05-29 06:44:45,269 | INFO     | mean y: 2477709.9594594594
[2026-05-29 08:46:01] 2026-05-29 06:44:45,269 | INFO     | intersect: 2477709.9594594594
[2026-05-29 08:46:01] 2026-05-29 06:44:45,269 | INFO     | chi2: 1.5464573209672738
[2026-05-29 08:46:01] 2026-05-29 06:44:45,269 | INFO     | current chi2=1.5464573209672738 (change=51.41802240531621 %)
[2026-05-29 08:46:01] 2026-05-29 06:44:45,270 | INFO     | sum of square deviations: 906703512.0
[2026-05-29 08:46:01] 2026-05-29 06:44:45,271 | INFO     | sum of deviations: 27961799638.000004
[2026-05-29 08:46:01] 2026-05-29 06:44:45,271 | INFO     | mean x (centered): 0.0
[2026-05-29 08:46:01] 2026-05-29 06:44:45,271 | INFO     | mean y: 2475439.7832167833
[2026-05-29 08:46:01] 2026-05-29 06:44:45,271 | INFO     | intersect: 2475439.7832167833
[2026-05-29 08:46:01] 2026-05-29 06:44:45,272 | INFO     | chi2: 1.547832866276674
[2026-05-29 08:46:01] 2026-05-29 06:44:45,272 | INFO     | current chi2=1.547832866276674 (change=-0.08894815852660153 %)
[2026-05-29 08:46:01] 2026-05-29 06:44:45,272 | INFO     | right removable region: 142
[2026-05-29 08:46:01] 2026-05-29 06:44:45,272 | INFO     | sum of square deviations: 1005179777.0
[2026-05-29 08:46:01] 2026-05-29 06:44:45,277 | INFO     | sum of deviations: -15608977100.499998
[2026-05-29 08:46:01] 2026-05-29 06:44:45,278 | INFO     | mean x (centered): 0.0
[2026-05-29 08:46:01] 2026-05-29 06:44:45,278 | INFO     | mean y: 2486225.9527027025
[2026-05-29 08:46:01] 2026-05-29 06:44:45,278 | INFO     | intersect: 2486225.9527027025
[2026-05-29 08:46:01] 2026-05-29 06:44:45,278 | INFO     | chi2: 1.7078516518403435
[2026-05-29 08:46:01] 2026-05-29 06:44:45,278 | INFO     | current chi2=1.7078516518403435 (change=46.34781732427319 %)
[2026-05-29 08:46:01] 2026-05-29 06:44:45,279 | INFO     | sum of square deviations: 906703512.0
[2026-05-29 08:46:01] 2026-05-29 06:44:45,280 | INFO     | sum of deviations: -16256696359.0
[2026-05-29 08:46:01] 2026-05-29 06:44:45,280 | INFO     | mean x (centered): 0.0
[2026-05-29 08:46:01] 2026-05-29 06:44:45,280 | INFO     | mean y: 2487157.5384615385
[2026-05-29 08:46:01] 2026-05-29 06:44:45,281 | INFO     | intersect: 2487157.5384615385
[2026-05-29 08:46:01] 2026-05-29 06:44:45,281 | INFO     | chi2: 1.6952538709138456
[2026-05-29 08:46:01] 2026-05-29 06:44:45,281 | INFO     | current chi2=1.6952538709138456 (change=0.7376390632595512 %)
[2026-05-29 08:46:01] 2026-05-29 06:44:45,281 | INFO     | left removable region: 10
[2026-05-29 08:46:01] 2026-05-29 06:44:45,282 | INFO     | sum of square deviations: 713140813.0
[2026-05-29 08:46:01] 2026-05-29 06:44:45,283 | INFO     | sum of deviations: 2314413749.0
[2026-05-29 08:46:01] 2026-05-29 06:44:45,283 | INFO     | mean x (centered): 0.0
[2026-05-29 08:46:01] 2026-05-29 06:44:45,283 | INFO     | mean y: 2517235.121212121
[2026-05-29 08:46:01] 2026-05-29 06:44:45,283 | INFO     | intersect: 2517235.121212121
[2026-05-29 08:46:01] 2026-05-29 06:44:45,283 | INFO     | chi2: 0.0014026414134316499
[2026-05-29 08:46:01] 2026-05-29 06:44:45,284 | INFO     | current memory leak: 3.25 B/s (using 132 data points, chi2=0.00)
[2026-05-29 08:46:01] 2026-05-29 06:44:45,284 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-05-29 08:46:01] 2026-05-29 06:44:45,306 | INFO     | ..............................
[2026-05-29 08:46:01] 2026-05-29 06:44:45,306 | INFO     | . Timing measurements:
[2026-05-29 08:46:01] 2026-05-29 06:44:45,307 | INFO     | . get job = 0 s
[2026-05-29 08:46:01] 2026-05-29 06:44:45,307 | INFO     | . initial setup = 7 s
[2026-05-29 08:46:01] 2026-05-29 06:44:45,307 | INFO     | . payload setup = 18 s
[2026-05-29 08:46:01] 2026-05-29 06:44:45,307 | INFO     | . stage-in = 0 s
[2026-05-29 08:46:01] 2026-05-29 06:44:45,307 | INFO     | . payload execution = 9281 s
[2026-05-29 08:46:01] 2026-05-29 06:44:45,307 | INFO     | . stage-out = 3 s
[2026-05-29 08:46:01] 2026-05-29 06:44:45,307 | INFO     | . log creation = 1 s
[2026-05-29 08:46:01] 2026-05-29 06:44:45,307 | INFO     | ..............................
[2026-05-29 08:46:01] 2026-05-29 06:44:45,896 | INFO     | 
[2026-05-29 08:46:01] 2026-05-29 06:44:45,896 | INFO     | job summary report
[2026-05-29 08:46:01] 2026-05-29 06:44:45,896 | INFO     | --------------------------------------------------
[2026-05-29 08:46:01] 2026-05-29 06:44:45,896 | INFO     | PanDA job id: 7157314833
[2026-05-29 08:46:01] 2026-05-29 06:44:45,897 | INFO     | task id: 49545102
[2026-05-29 08:46:01] 2026-05-29 06:44:45,897 | INFO     | errors: (none)
[2026-05-29 08:46:01] 2026-05-29 06:44:45,897 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-29 08:46:01] 2026-05-29 06:44:45,897 | INFO     | pilot state: finished 
[2026-05-29 08:46:01] 2026-05-29 06:44:45,897 | INFO     | transexitcode: 0
[2026-05-29 08:46:01] 2026-05-29 06:44:45,897 | INFO     | exeerrorcode: 0
[2026-05-29 08:46:01] 2026-05-29 06:44:45,897 | INFO     | exeerrordiag: 
[2026-05-29 08:46:01] 2026-05-29 06:44:45,897 | INFO     | exitcode: 0
[2026-05-29 08:46:01] 2026-05-29 06:44:45,898 | INFO     | exitmsg: OK
[2026-05-29 08:46:01] 2026-05-29 06:44:45,898 | INFO     | cpuconsumptiontime: 50647 s
[2026-05-29 08:46:01] 2026-05-29 06:44:45,898 | INFO     | nevents: 400
[2026-05-29 08:46:01] 2026-05-29 06:44:45,898 | INFO     | neventsw: 0
[2026-05-29 08:46:01] 2026-05-29 06:44:45,898 | INFO     | pid: 24546
[2026-05-29 08:46:01] 2026-05-29 06:44:45,898 | INFO     | pgrp: 24546
[2026-05-29 08:46:01] 2026-05-29 06:44:45,898 | INFO     | corecount: 8
[2026-05-29 08:46:01] 2026-05-29 06:44:45,898 | INFO     | event service: False
[2026-05-29 08:46:01] 2026-05-29 06:44:45,898 | INFO     | sizes: {0: 2265839, 1: 2267668, 2: 2267668, 9303: 2296072, 9304: 2296071, 9307: 2305125, 9308: 2305309, 9310: 2305567}
[2026-05-29 08:46:01] 2026-05-29 06:44:45,898 | INFO     | --------------------------------------------------
[2026-05-29 08:46:01] 2026-05-29 06:44:45,899 | INFO     | 
[2026-05-29 08:46:01] 2026-05-29 06:44:45,899 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-05-29 08:46:01] 2026-05-29 06:44:46,457 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-29 08:46:01] 2026-05-29 06:44:46,457 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-29 08:46:01] 2026-05-29 06:44:46,457 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-29 08:46:01] 2026-05-29 06:44:46,457 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-29 08:46:01] 2026-05-29 06:44:46,457 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-29 08:46:01] 2026-05-29 06:44:46,458 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-29 08:46:01] 2026-05-29 06:44:46,458 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-29 08:46:01] 2026-05-29 06:44:46,458 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-29 08:46:01] 2026-05-29 06:44:46,458 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-29 08:46:01] 2026-05-29 06:44:46,458 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-29 08:46:01] 2026-05-29 06:44:46,458 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-29 08:46:01] 2026-05-29 06:44:46,458 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-29 08:46:01] 2026-05-29 06:44:46,458 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-29 08:46:01] 2026-05-29 06:44:46,459 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-29 08:46:01] 2026-05-29 06:44:46,459 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-29 08:46:01] 2026-05-29 06:44:46,459 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-29 08:46:01] 2026-05-29 06:44:46,459 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-29 08:46:01] 2026-05-29 06:44:46,459 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-29 08:46:01] 2026-05-29 06:44:46,459 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-29 08:46:01] 2026-05-29 06:44:46,459 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-29 08:46:01] 2026-05-29 06:44:46,460 | INFO     | job 7157314833 has completed (purged errors)
[2026-05-29 08:46:01] 2026-05-29 06:44:46,460 | INFO     | overall cleanup function is called
[2026-05-29 08:46:01] 2026-05-29 06:44:47,469 | INFO     | --- collectZombieJob: --- 10, [24546]
[2026-05-29 08:46:01] 2026-05-29 06:44:47,469 | INFO     | zombie collector waiting for pid 24546
[2026-05-29 08:46:01] 2026-05-29 06:44:47,469 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-29 08:46:01] 2026-05-29 06:44:47,470 | INFO     | collected zombie processes
[2026-05-29 08:46:01] 2026-05-29 06:44:47,470 | INFO     | will attempt to kill all subprocesses of pid=24546
[2026-05-29 08:46:01] 2026-05-29 06:44:47,528 | INFO     | process IDs to be killed: [24546] (in reverse order)
[2026-05-29 08:46:01] 2026-05-29 06:44:48,351 | WARNING  | found no corresponding commands to process id(s)
[2026-05-29 08:46:01] 2026-05-29 06:44:48,351 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-29 08:46:01] 2026-05-29 06:44:48,353 | INFO     | did not find any defunct processes belonging to 24546
[2026-05-29 08:46:01] 2026-05-29 06:44:48,355 | INFO     | did not find any defunct processes belonging to 24546
[2026-05-29 08:46:01] 2026-05-29 06:44:48,355 | INFO     | Ready for new job
[2026-05-29 08:46:01] 2026-05-29 06:44:48,357 | INFO     | ***************************************
[2026-05-29 08:46:01] 2026-05-29 06:44:48,357 | INFO     | ***  PanDA Pilot version 3.13.1.30  ***
[2026-05-29 08:46:01] 2026-05-29 06:44:48,357 | INFO     | ***************************************
[2026-05-29 08:46:01] 2026-05-29 06:44:48,357 | INFO     | 
[2026-05-29 08:46:01] 2026-05-29 06:44:48,358 | INFO     | pilot is running in a VM
[2026-05-29 08:46:01] 2026-05-29 06:44:48,358 | INFO     | architecture information:
[2026-05-29 08:46:01] 2026-05-29 06:44:48,371 | INFO     | executing command: cat /etc/os-release
[2026-05-29 08:46:01] 2026-05-29 06:44:48,654 | INFO     | cat /etc/os-release:
[2026-05-29 08:46:01] NAME="CentOS Linux"
[2026-05-29 08:46:01] VERSION="7 (Core)"
[2026-05-29 08:46:01] ID="centos"
[2026-05-29 08:46:01] ID_LIKE="rhel fedora"
[2026-05-29 08:46:01] VERSION_ID="7"
[2026-05-29 08:46:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-29 08:46:01] ANSI_COLOR="0;31"
[2026-05-29 08:46:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-29 08:46:01] HOME_URL="https://www.centos.org/"
[2026-05-29 08:46:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-29 08:46:01] 
[2026-05-29 08:46:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-29 08:46:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-29 08:46:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-29 08:46:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-29 08:46:01] 
[2026-05-29 08:46:01] 2026-05-29 06:44:48,654 | INFO     | ***************************************
[2026-05-29 08:46:01] 2026-05-29 06:44:49,157 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-05-29 08:46:01] 2026-05-29 06:44:49,495 | INFO     | sufficient remaining disk space (495167995904 B)
[2026-05-29 08:46:01] 2026-05-29 06:44:49,496 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-29 08:46:01] 2026-05-29 06:44:49,496 | INFO     | current server update state: UPDATING_FINAL
[2026-05-29 08:46:01] 2026-05-29 06:44:49,496 | INFO     | update_server=False
[2026-05-29 08:46:01] 2026-05-29 06:44:49,496 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-29 08:46:01] 2026-05-29 06:44:49,500 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-29 08:46:01] 2026-05-29 06:44:49,574 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-29 08:46:01] 2026-05-29 06:44:49,574 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-29 08:46:01] 2026-05-29 06:44:49,574 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-29 08:46:01] 2026-05-29 06:44:49,575 | INFO     | will abort loop
[2026-05-29 08:46:01] 2026-05-29 06:44:50,262 | INFO     | all payload control threads have been joined
[2026-05-29 08:46:01] 2026-05-29 06:44:50,437 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-29 08:46:01] 2026-05-29 06:44:50,502 | INFO     | [job] retrieve thread has finished
[2026-05-29 08:46:01] 2026-05-29 06:44:50,536 | INFO     | [data] copytool_in thread has finished
[2026-05-29 08:46:01] 2026-05-29 06:44:50,539 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-29 08:46:01] 2026-05-29 06:44:50,571 | INFO     | all data control threads have been joined
[2026-05-29 08:46:01] 2026-05-29 06:44:50,580 | INFO     | [job] job monitor thread has finished
[2026-05-29 08:46:01] 2026-05-29 06:44:50,658 | INFO     | [payload] failed_post thread has finished
[2026-05-29 08:46:01] 2026-05-29 06:44:50,682 | INFO     | [job] validate thread has finished
[2026-05-29 08:46:01] 2026-05-29 06:44:51,051 | INFO     | all job control threads have been joined
[2026-05-29 08:46:01] 2026-05-29 06:44:51,236 | INFO     | [payload] validate_post thread has finished
[2026-05-29 08:46:01] 2026-05-29 06:44:51,237 | INFO     | [job] create_data_payload thread has finished
[2026-05-29 08:46:01] 2026-05-29 06:44:51,268 | INFO     | [payload] control thread has finished
[2026-05-29 08:46:01] 2026-05-29 06:44:51,545 | INFO     | [job] queue monitor thread has finished
[2026-05-29 08:46:01] 2026-05-29 06:44:51,577 | INFO     | [data] control thread has finished
[2026-05-29 08:46:01] 2026-05-29 06:44:51,703 | INFO     | [payload] execute_payloads thread has finished
[2026-05-29 08:46:01] 2026-05-29 06:44:51,724 | INFO     | [payload] validate_pre thread has finished
[2026-05-29 08:46:01] 2026-05-29 06:44:52,057 | INFO     | [job] control thread has finished
[2026-05-29 08:46:01] 2026-05-29 06:44:52,444 | INFO     | [data] copytool_out thread has finished
[2026-05-29 08:46:01] 2026-05-29 06:44:53,509 | INFO     | [data] queue_monitor thread has finished
[2026-05-29 08:46:01] 2026-05-29 06:44:59,597 | INFO     | job.realtimelogging is not enabled
[2026-05-29 08:46:01] 2026-05-29 06:45:00,603 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-29 08:46:01] 2026-05-29 06:45:18,549 | INFO     | PID=20107 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-29 08:46:01] 2026-05-29 06:45:18,549 | INFO     | .. there are 2 such processes running
[2026-05-29 08:46:01] 2026-05-29 06:45:18,563 | INFO     | found 0 job(s) in 20 queues
[2026-05-29 08:46:01] 2026-05-29 06:45:18,563 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-29 08:46:01] 2026-05-29 06:45:18,564 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-29 08:46:01] 2026-05-29 06:45:48,979 | INFO     | [monitor] cgroup control has ended
[2026-05-29 08:46:01] 2026-05-29 06:45:50,151 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139826864977728)>', '<ExcThread(monitor, started 139826217088768)>']
[2026-05-29 08:46:01] 2026-05-29 06:45:50,756 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-29 08:46:01] 2026-05-29 06:45:50,756 | INFO     | [monitor] control thread has ended
[2026-05-29 08:46:01] 2026-05-29 06:45:55,177 | INFO     | all workflow threads have been joined
[2026-05-29 08:46:01] 2026-05-29 06:45:55,177 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-29 08:46:01] 2026-05-29 06:45:55,177 | INFO     | traces error code: 0
[2026-05-29 08:46:01] 2026-05-29 06:45:55,178 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-29 08:46:01] 2026-05-29 06:45:55,598 [wrapper] ==== pilot stdout END ====
[2026-05-29 08:46:01] 2026-05-29 06:45:55,699 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-29 08:46:01] 2026-05-29 06:45:55,803 [wrapper] pilotpid: 20107
[2026-05-29 08:46:01] 2026-05-29 06:45:55,885 [wrapper] Pilot exit status: 0
[2026-05-29 08:46:01] 2026-05-29 06:45:56,465 [wrapper] pandaids: 7157314833
[2026-05-29 08:46:01] 2026-05-29 06:45:57,512 [wrapper] cleanup supervisor_pilot 14169 20108
[2026-05-29 08:46:01] 2026-05-29 06:45:57,595 [wrapper] Test setup, not cleaning
[2026-05-29 08:46:01] 2026-05-29 06:45:57,652 [wrapper] apfmon messages muted
[2026-05-29 08:46:01] 2026-05-29 06:45:57,780 [wrapper] ==== wrapper stdout END ====
[2026-05-29 08:46:01] 2026-05-29 06:45:57,904 [wrapper] ==== wrapper stderr END ====
[2026-05-29 08:46:01]  *** Error codes and diagnostics ***
[2026-05-29 08:46:01]     "exeErrorCode": 0,
[2026-05-29 08:46:01]     "pilotErrorCode": 0,
[2026-05-29 08:46:01]  *** Listing of results directory ***
[2026-05-29 08:46:01] total 435680
[2026-05-29 08:46:01] -rw-r--r--. 1 boinc boinc    709501 May 28 19:10 pilot3.tar.gz
[2026-05-29 08:46:01] -rwx------. 1 boinc boinc     36281 May 28 19:12 runpilot2-wrapper.sh
[2026-05-29 08:46:01] -rw-r--r--. 1 boinc boinc      5631 May 28 19:14 queuedata.json
[2026-05-29 08:46:01] -rw-r--r--. 1 boinc boinc       100 May 29 06:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-29 08:46:01] -rwxr-xr-x. 1 boinc boinc      7986 May 29 06:09 run_atlas
[2026-05-29 08:46:01] -rw-r--r--. 1 boinc boinc       105 May 29 06:09 job.xml
[2026-05-29 08:46:01] -rw-r--r--. 1 boinc boinc      6306 May 29 06:09 init_data.xml
[2026-05-29 08:46:01] -rw-r--r--. 2 boinc boinc 268252345 May 29 06:09 EVNT.49539563._000800.pool.root.1
[2026-05-29 08:46:01] -rw-r--r--. 2 boinc boinc     15667 May 29 06:09 start_atlas.sh
[2026-05-29 08:46:01] drwxrwx--x. 2 boinc boinc        68 May 29 06:09 shared
[2026-05-29 08:46:01] -rw-r--r--. 2 boinc boinc    722744 May 29 06:09 input.tar.gz
[2026-05-29 08:46:01] -rw-r--r--. 1 boinc boinc         0 May 29 06:09 boinc_lockfile
[2026-05-29 08:46:01] -rw-r--r--. 1 boinc boinc      2569 May 29 06:09 pandaJob.out
[2026-05-29 08:46:01] -rw-------. 1 boinc boinc    996122 May 29 06:09 agis_schedconf.cvmfs.json
[2026-05-29 08:46:01] -rw-------. 1 boinc boinc         0 May 29 06:09 agis_ddmendpoints.agis.ALL.json
[2026-05-29 08:46:01] -rw-------. 1 boinc boinc   1251485 May 29 06:09 cric_ddmendpoints.json
[2026-05-29 08:46:01] -rw-------. 1 boinc boinc       415 May 29 06:09 workernode_map.json
[2026-05-29 08:46:01] drwx------. 5 boinc boinc      4096 May 29 06:09 pilot3
[2026-05-29 08:46:01] -rw-------. 1 boinc boinc 171483576 May 29 08:43 HITS.49545102._019565.pool.root.1
[2026-05-29 08:46:01] -rw-r--r--. 1 boinc boinc       487 May 29 08:43 boinc_task_state.xml
[2026-05-29 08:46:01] -rw-------. 1 boinc boinc      1020 May 29 08:44 memory_monitor_summary.json
[2026-05-29 08:46:01] -rw-------. 1 boinc boinc    355224 May 29 08:44 log.49545102._019565.job.log.tgz.1
[2026-05-29 08:46:01] -rw-------. 1 boinc boinc      6386 May 29 08:44 heartbeat_new.json
[2026-05-29 08:46:01] -rw-------. 1 boinc boinc      6277 May 29 08:44 heartbeat.json
[2026-05-29 08:46:01] -rw-------. 1 boinc boinc        95 May 29 08:45 pilot_heartbeat.json
[2026-05-29 08:46:01] -rw-------. 1 boinc boinc      5141 May 29 08:45 pilotlog.txt
[2026-05-29 08:46:01] -rw-------. 1 boinc boinc    885397 May 29 08:45 log.49545102._019565.job.log.1
[2026-05-29 08:46:01] -rw-r--r--. 1 boinc boinc      8192 May 29 08:45 boinc_mmap_file
[2026-05-29 08:46:01] -rw-r--r--. 1 boinc boinc        27 May 29 08:45 wrapper_checkpoint.txt
[2026-05-29 08:46:01] -rw-------. 1 boinc boinc       357 May 29 08:45 output.list
[2026-05-29 08:46:01] -rw-r--r--. 1 boinc boinc       410 May 29 08:46 runtime_log
[2026-05-29 08:46:01] -rw-------. 1 boinc boinc   1259520 May 29 08:46 result.tar.gz
[2026-05-29 08:46:01] -rw-r--r--. 1 boinc boinc      8438 May 29 08:46 runtime_log.err
[2026-05-29 08:46:01] -rw-------. 1 boinc boinc       652 May 29 08:46 777aa069f3ed.diag
[2026-05-29 08:46:01] -rw-r--r--. 1 boinc boinc     20560 May 29 08:46 stderr.txt
[2026-05-29 08:46:01] HITS file was successfully produced:
[2026-05-29 08:46:01] -rw-------. 1 boinc boinc 171483576 May 29 08:43 shared/HITS.pool.root.1
[2026-05-29 08:46:01]  *** Contents of shared directory: ***
[2026-05-29 08:46:01] total 431392
[2026-05-29 08:46:01] -rw-r--r--. 2 boinc boinc 268252345 May 29 06:09 ATLAS.root_0
[2026-05-29 08:46:01] -rw-r--r--. 2 boinc boinc     15667 May 29 06:09 start_atlas.sh
[2026-05-29 08:46:01] -rw-r--r--. 2 boinc boinc    722744 May 29 06:09 input.tar.gz
[2026-05-29 08:46:01] -rw-------. 1 boinc boinc 171483576 May 29 08:43 HITS.pool.root.1
[2026-05-29 08:46:01] -rw-------. 1 boinc boinc   1259520 May 29 08:46 result.tar.gz
08:46:02 (16076): run_atlas exited; CPU time 50711.050922
08:46:02 (16076): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN