Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:58:50 (24952): wrapper (7.7.26015): starting
01:58:50 (24952): wrapper: running run_atlas (--nthreads 8)
[2026-05-29 01:58:50] Arguments: --nthreads 8
[2026-05-29 01:58:50] Threads: 8
[2026-05-29 01:58:50] Checking for CVMFS
[2026-05-29 01:58:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-29 01:58:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-29 01:58:52] Running cvmfs_config stat atlas.cern.ch
[2026-05-29 01:58:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-29 01:58:53] 2.11.2.0 30309 62350 104472 159913 0 53 22113552 25165824 1027 130560 0 26282738 99.898 15152389 12322 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-29 01:58:53] CVMFS is ok
[2026-05-29 01:58:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-29 01:58:53] Checking for apptainer binary...
[2026-05-29 01:58:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-29 01:58:53] Running /usr/bin/apptainer --version
[2026-05-29 01:58:53] apptainer version 1.3.2-1.el7
[2026-05-29 01:58:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-29 01:59:01] cg-vwn233.simple-grid.lan
[2026-05-29 01:59:01] apptainer works
[2026-05-29 01:59:01] Set ATHENA_PROC_NUMBER=8
[2026-05-29 01:59:01] Set ATHENA_CORE_NUMBER=8
[2026-05-29 01:59:02] Starting ATLAS job with PandaID=7157302694
[2026-05-29 01:59:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-29 05:51:53]  *** The last 200 lines of the pilot log: ***
[2026-05-29 05:51:53] 2026-05-29 03:50:58,510 | INFO     | this job has now completed (state=finished)
[2026-05-29 05:51:53] 2026-05-29 03:50:58,510 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-29 05:51:53] 2026-05-29 03:50:58,510 | INFO     | log transfer has been attempted: DONE
[2026-05-29 05:51:53] 2026-05-29 03:50:58,510 | INFO     | job 7157302694 has finished - writing final server update
[2026-05-29 05:51:53] 2026-05-29 03:50:58,511 | INFO     | total number of processed events: 400 (read)
[2026-05-29 05:51:53] 2026-05-29 03:50:58,513 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7157302694/memory_monitor_summary.json (trf name=prmon)
[2026-05-29 05:51:53] 2026-05-29 03:50:58,513 | INFO     | extracted standard info from prmon json
[2026-05-29 05:51:53] 2026-05-29 03:50:58,514 | INFO     | extracted standard memory fields from prmon json
[2026-05-29 05:51:53] 2026-05-29 03:50:58,514 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-29 05:51:53] 2026-05-29 03:50:58,514 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-29 05:51:53] 2026-05-29 03:50:58,519 | INFO     | fitting pss+swap vs Time
[2026-05-29 05:51:53] 2026-05-29 03:50:58,519 | INFO     | sum of square deviations: 3168461268.0
[2026-05-29 05:51:53] 2026-05-29 03:50:58,521 | INFO     | sum of deviations: 50720318856.99998
[2026-05-29 05:51:53] 2026-05-29 03:50:58,521 | INFO     | mean x (centered): 0.0
[2026-05-29 05:51:53] 2026-05-29 03:50:58,521 | INFO     | mean y: 2465150.806451613
[2026-05-29 05:51:53] 2026-05-29 03:50:58,521 | INFO     | intersect: 2465150.806451613
[2026-05-29 05:51:53] 2026-05-29 03:50:58,522 | INFO     | chi2: 9.683241527916504
[2026-05-29 05:51:53] 2026-05-29 03:50:58,522 | INFO     | sum of square deviations: 2954447953.0
[2026-05-29 05:51:53] 2026-05-29 03:50:58,524 | INFO     | sum of deviations: 79373135370.49997
[2026-05-29 05:51:53] 2026-05-29 03:50:58,524 | INFO     | mean x (centered): 0.0
[2026-05-29 05:51:53] 2026-05-29 03:50:58,527 | INFO     | mean y: 2485275.3726415094
[2026-05-29 05:51:53] 2026-05-29 03:50:58,528 | INFO     | intersect: 2485275.3726415094
[2026-05-29 05:51:53] 2026-05-29 03:50:58,528 | INFO     | chi2: 8.214990451079261
[2026-05-29 05:51:53] 2026-05-29 03:50:58,528 | INFO     | current chi2=8.214990451079261 (change=15.162805477941632 %)
[2026-05-29 05:51:53] 2026-05-29 03:50:58,528 | INFO     | right removable region: 211
[2026-05-29 05:51:53] 2026-05-29 03:50:58,529 | INFO     | sum of square deviations: 2954447953.0
[2026-05-29 05:51:53] 2026-05-29 03:50:58,530 | INFO     | sum of deviations: -27867543596.999992
[2026-05-29 05:51:53] 2026-05-29 03:50:58,531 | INFO     | mean x (centered): 0.0
[2026-05-29 05:51:53] 2026-05-29 03:50:58,531 | INFO     | mean y: 2521125.9716981133
[2026-05-29 05:51:53] 2026-05-29 03:50:58,531 | INFO     | intersect: 2521125.9716981133
[2026-05-29 05:51:53] 2026-05-29 03:50:58,531 | INFO     | chi2: 4.301569953411257
[2026-05-29 05:51:53] 2026-05-29 03:50:58,532 | INFO     | current chi2=4.301569953411257 (change=55.57716968011223 %)
[2026-05-29 05:51:53] 2026-05-29 03:50:58,532 | INFO     | sum of square deviations: 2750295288.0
[2026-05-29 05:51:53] 2026-05-29 03:50:58,534 | INFO     | sum of deviations: -79735230181.0
[2026-05-29 05:51:53] 2026-05-29 03:50:58,534 | INFO     | mean x (centered): 0.0
[2026-05-29 05:51:53] 2026-05-29 03:50:58,534 | INFO     | mean y: 2559745.4106280194
[2026-05-29 05:51:53] 2026-05-29 03:50:58,534 | INFO     | intersect: 2559745.4106280194
[2026-05-29 05:51:53] 2026-05-29 03:50:58,534 | INFO     | chi2: 1.9666987147954151
[2026-05-29 05:51:53] 2026-05-29 03:50:58,535 | INFO     | current chi2=1.9666987147954151 (change=54.279513384740575 %)
[2026-05-29 05:51:53] 2026-05-29 03:50:58,535 | INFO     | sum of square deviations: 2555770710.5
[2026-05-29 05:51:53] 2026-05-29 03:50:58,537 | INFO     | sum of deviations: -84486756891.5
[2026-05-29 05:51:53] 2026-05-29 03:50:58,537 | INFO     | mean x (centered): 0.0
[2026-05-29 05:51:53] 2026-05-29 03:50:58,537 | INFO     | mean y: 2563387.915841584
[2026-05-29 05:51:53] 2026-05-29 03:50:58,537 | INFO     | intersect: 2563387.915841584
[2026-05-29 05:51:53] 2026-05-29 03:50:58,537 | INFO     | chi2: 1.8672799119580503
[2026-05-29 05:51:53] 2026-05-29 03:50:58,538 | INFO     | current chi2=1.8672799119580503 (change=5.0551109882484875 %)
[2026-05-29 05:51:53] 2026-05-29 03:50:58,538 | INFO     | left removable region: 15
[2026-05-29 05:51:53] 2026-05-29 03:50:58,538 | INFO     | sum of square deviations: 2334722845.0
[2026-05-29 05:51:53] 2026-05-29 03:50:58,540 | INFO     | sum of deviations: -54399844103.0
[2026-05-29 05:51:53] 2026-05-29 03:50:58,540 | INFO     | mean x (centered): 0.0
[2026-05-29 05:51:53] 2026-05-29 03:50:58,540 | INFO     | mean y: 2587843.6428571427
[2026-05-29 05:51:53] 2026-05-29 03:50:58,540 | INFO     | intersect: 2587843.6428571427
[2026-05-29 05:51:53] 2026-05-29 03:50:58,540 | INFO     | chi2: 0.17462481823552625
[2026-05-29 05:51:53] 2026-05-29 03:50:58,541 | INFO     | current memory leak: -23.30 B/s (using 196 data points, chi2=0.17)
[2026-05-29 05:51:53] 2026-05-29 03:50:58,541 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-05-29 05:51:53] 2026-05-29 03:50:58,565 | INFO     | ..............................
[2026-05-29 05:51:53] 2026-05-29 03:50:58,565 | INFO     | . Timing measurements:
[2026-05-29 05:51:53] 2026-05-29 03:50:58,565 | INFO     | . get job = 0 s
[2026-05-29 05:51:53] 2026-05-29 03:50:58,565 | INFO     | . initial setup = 117 s
[2026-05-29 05:51:53] 2026-05-29 03:50:58,565 | INFO     | . payload setup = 203 s
[2026-05-29 05:51:53] 2026-05-29 03:50:58,565 | INFO     | . stage-in = 0 s
[2026-05-29 05:51:53] 2026-05-29 03:50:58,565 | INFO     | . payload execution = 13310 s
[2026-05-29 05:51:53] 2026-05-29 03:50:58,565 | INFO     | . stage-out = 3 s
[2026-05-29 05:51:53] 2026-05-29 03:50:58,565 | INFO     | . log creation = 1 s
[2026-05-29 05:51:53] 2026-05-29 03:50:58,566 | INFO     | ..............................
[2026-05-29 05:51:53] 2026-05-29 03:50:58,699 | INFO     | 
[2026-05-29 05:51:53] 2026-05-29 03:50:58,700 | INFO     | job summary report
[2026-05-29 05:51:53] 2026-05-29 03:50:58,700 | INFO     | --------------------------------------------------
[2026-05-29 05:51:53] 2026-05-29 03:50:58,700 | INFO     | PanDA job id: 7157302694
[2026-05-29 05:51:53] 2026-05-29 03:50:58,700 | INFO     | task id: 49545102
[2026-05-29 05:51:53] 2026-05-29 03:50:58,700 | INFO     | errors: (none)
[2026-05-29 05:51:53] 2026-05-29 03:50:58,700 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-29 05:51:53] 2026-05-29 03:50:58,700 | INFO     | pilot state: finished 
[2026-05-29 05:51:53] 2026-05-29 03:50:58,701 | INFO     | transexitcode: 0
[2026-05-29 05:51:53] 2026-05-29 03:50:58,701 | INFO     | exeerrorcode: 0
[2026-05-29 05:51:53] 2026-05-29 03:50:58,701 | INFO     | exeerrordiag: 
[2026-05-29 05:51:53] 2026-05-29 03:50:58,701 | INFO     | exitcode: 0
[2026-05-29 05:51:53] 2026-05-29 03:50:58,701 | INFO     | exitmsg: OK
[2026-05-29 05:51:53] 2026-05-29 03:50:58,701 | INFO     | cpuconsumptiontime: 49918 s
[2026-05-29 05:51:53] 2026-05-29 03:50:58,701 | INFO     | nevents: 400
[2026-05-29 05:51:53] 2026-05-29 03:50:58,701 | INFO     | neventsw: 0
[2026-05-29 05:51:53] 2026-05-29 03:50:58,701 | INFO     | pid: 1031
[2026-05-29 05:51:53] 2026-05-29 03:50:58,701 | INFO     | pgrp: 1031
[2026-05-29 05:51:53] 2026-05-29 03:50:58,702 | INFO     | corecount: 8
[2026-05-29 05:51:53] 2026-05-29 03:50:58,702 | INFO     | event service: False
[2026-05-29 05:51:53] 2026-05-29 03:50:58,702 | INFO     | sizes: {0: 2265181, 1: 2266093, 2: 2267667, 12: 2267695, 13518: 2297925, 13522: 2306923, 13524: 2307107, 13527: 2307301}
[2026-05-29 05:51:53] 2026-05-29 03:50:58,702 | INFO     | --------------------------------------------------
[2026-05-29 05:51:53] 2026-05-29 03:50:58,702 | INFO     | 
[2026-05-29 05:51:53] 2026-05-29 03:50:58,702 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-05-29 05:51:53] 2026-05-29 03:50:59,269 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-29 05:51:53] 2026-05-29 03:50:59,269 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-29 05:51:53] 2026-05-29 03:50:59,269 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-29 05:51:53] 2026-05-29 03:50:59,269 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-29 05:51:53] 2026-05-29 03:50:59,270 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-29 05:51:53] 2026-05-29 03:50:59,270 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-29 05:51:53] 2026-05-29 03:50:59,270 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-29 05:51:53] 2026-05-29 03:50:59,270 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-29 05:51:53] 2026-05-29 03:50:59,270 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-29 05:51:53] 2026-05-29 03:50:59,270 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-29 05:51:53] 2026-05-29 03:50:59,270 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-29 05:51:53] 2026-05-29 03:50:59,270 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-29 05:51:53] 2026-05-29 03:50:59,271 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-29 05:51:53] 2026-05-29 03:50:59,271 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-29 05:51:53] 2026-05-29 03:50:59,271 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-29 05:51:53] 2026-05-29 03:50:59,271 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-29 05:51:53] 2026-05-29 03:50:59,271 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-29 05:51:53] 2026-05-29 03:50:59,271 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-29 05:51:53] 2026-05-29 03:50:59,271 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-29 05:51:53] 2026-05-29 03:50:59,278 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-29 05:51:53] 2026-05-29 03:50:59,279 | INFO     | job 7157302694 has completed (purged errors)
[2026-05-29 05:51:53] 2026-05-29 03:50:59,279 | INFO     | overall cleanup function is called
[2026-05-29 05:51:53] 2026-05-29 03:51:00,287 | INFO     | --- collectZombieJob: --- 10, [1031]
[2026-05-29 05:51:53] 2026-05-29 03:51:00,288 | INFO     | zombie collector waiting for pid 1031
[2026-05-29 05:51:53] 2026-05-29 03:51:00,288 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-29 05:51:53] 2026-05-29 03:51:00,288 | INFO     | collected zombie processes
[2026-05-29 05:51:53] 2026-05-29 03:51:00,288 | INFO     | will attempt to kill all subprocesses of pid=1031
[2026-05-29 05:51:53] 2026-05-29 03:51:00,359 | INFO     | process IDs to be killed: [1031] (in reverse order)
[2026-05-29 05:51:53] 2026-05-29 03:51:01,274 | WARNING  | found no corresponding commands to process id(s)
[2026-05-29 05:51:53] 2026-05-29 03:51:01,274 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-29 05:51:53] 2026-05-29 03:51:01,276 | INFO     | did not find any defunct processes belonging to 1031
[2026-05-29 05:51:53] 2026-05-29 03:51:01,278 | INFO     | did not find any defunct processes belonging to 1031
[2026-05-29 05:51:53] 2026-05-29 03:51:01,278 | INFO     | Ready for new job
[2026-05-29 05:51:53] 2026-05-29 03:51:01,280 | INFO     | ***************************************
[2026-05-29 05:51:53] 2026-05-29 03:51:01,280 | INFO     | ***  PanDA Pilot version 3.13.1.30  ***
[2026-05-29 05:51:53] 2026-05-29 03:51:01,280 | INFO     | ***************************************
[2026-05-29 05:51:53] 2026-05-29 03:51:01,280 | INFO     | 
[2026-05-29 05:51:53] 2026-05-29 03:51:01,281 | INFO     | pilot is running in a VM
[2026-05-29 05:51:53] 2026-05-29 03:51:01,281 | INFO     | architecture information:
[2026-05-29 05:51:53] 2026-05-29 03:51:01,295 | INFO     | executing command: cat /etc/os-release
[2026-05-29 05:51:53] 2026-05-29 03:51:01,633 | INFO     | cat /etc/os-release:
[2026-05-29 05:51:53] NAME="CentOS Linux"
[2026-05-29 05:51:53] VERSION="7 (Core)"
[2026-05-29 05:51:53] ID="centos"
[2026-05-29 05:51:53] ID_LIKE="rhel fedora"
[2026-05-29 05:51:53] VERSION_ID="7"
[2026-05-29 05:51:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-29 05:51:53] ANSI_COLOR="0;31"
[2026-05-29 05:51:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-29 05:51:53] HOME_URL="https://www.centos.org/"
[2026-05-29 05:51:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-29 05:51:53] 
[2026-05-29 05:51:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-29 05:51:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-29 05:51:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-29 05:51:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-29 05:51:53] 
[2026-05-29 05:51:53] 2026-05-29 03:51:01,633 | INFO     | ***************************************
[2026-05-29 05:51:53] 2026-05-29 03:51:02,137 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-05-29 05:51:53] 2026-05-29 03:51:02,416 | INFO     | sufficient remaining disk space (495087255552 B)
[2026-05-29 05:51:53] 2026-05-29 03:51:02,417 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-29 05:51:53] 2026-05-29 03:51:02,417 | INFO     | current server update state: UPDATING_FINAL
[2026-05-29 05:51:53] 2026-05-29 03:51:02,417 | INFO     | update_server=False
[2026-05-29 05:51:53] 2026-05-29 03:51:02,417 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-29 05:51:53] 2026-05-29 03:51:02,418 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-29 05:51:53] 2026-05-29 03:51:02,419 | INFO     | aborting loop
[2026-05-29 05:51:53] 2026-05-29 03:51:02,419 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-29 05:51:53] 2026-05-29 03:51:02,872 | INFO     | all job control threads have been joined
[2026-05-29 05:51:53] 2026-05-29 03:51:03,256 | INFO     | all data control threads have been joined
[2026-05-29 05:51:53] 2026-05-29 03:51:03,424 | INFO     | [job] retrieve thread has finished
[2026-05-29 05:51:53] 2026-05-29 03:51:03,425 | INFO     | [job] job monitor thread has finished
[2026-05-29 05:51:53] 2026-05-29 03:51:03,495 | INFO     | [payload] execute_payloads thread has finished
[2026-05-29 05:51:53] 2026-05-29 03:51:03,614 | INFO     | [payload] failed_post thread has finished
[2026-05-29 05:51:53] 2026-05-29 03:51:03,717 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-29 05:51:53] 2026-05-29 03:51:03,718 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-29 05:51:53] 2026-05-29 03:51:03,721 | INFO     | [job] create_data_payload thread has finished
[2026-05-29 05:51:53] 2026-05-29 03:51:03,728 | INFO     | [data] copytool_in thread has finished
[2026-05-29 05:51:53] 2026-05-29 03:51:03,775 | INFO     | [payload] validate_pre thread has finished
[2026-05-29 05:51:53] 2026-05-29 03:51:03,827 | INFO     | all payload control threads have been joined
[2026-05-29 05:51:53] 2026-05-29 03:51:03,878 | INFO     | [job] control thread has finished
[2026-05-29 05:51:53] 2026-05-29 03:51:04,262 | INFO     | [data] control thread has finished
[2026-05-29 05:51:53] 2026-05-29 03:51:04,289 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-29 05:51:53] 2026-05-29 03:51:04,643 | INFO     | [payload] validate_post thread has finished
[2026-05-29 05:51:53] 2026-05-29 03:51:04,705 | INFO     | [job] validate thread has finished
[2026-05-29 05:51:53] 2026-05-29 03:51:04,723 | INFO     | [job] queue monitor thread has finished
[2026-05-29 05:51:53] 2026-05-29 03:51:04,833 | INFO     | [payload] control thread has finished
[2026-05-29 05:51:53] 2026-05-29 03:51:05,724 | INFO     | [data] copytool_out thread has finished
[2026-05-29 05:51:53] 2026-05-29 03:51:06,428 | INFO     | [data] queue_monitor thread has finished
[2026-05-29 05:51:53] 2026-05-29 03:51:30,859 | INFO     | PID=28970 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-29 05:51:53] 2026-05-29 03:51:30,859 | INFO     | .. there are 2 such processes running
[2026-05-29 05:51:53] 2026-05-29 03:51:30,860 | INFO     | found 0 job(s) in 20 queues
[2026-05-29 05:51:53] 2026-05-29 03:51:30,860 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-29 05:51:53] 2026-05-29 03:51:30,860 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-29 05:51:53] 2026-05-29 03:51:41,348 | INFO     | [monitor] cgroup control has ended
[2026-05-29 05:51:53] 2026-05-29 03:51:42,943 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140473547614016)>', '<ExcThread(monitor, started 140473255577344)>']
[2026-05-29 05:51:53] 2026-05-29 03:51:43,937 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-29 05:51:53] 2026-05-29 03:51:43,938 | INFO     | [monitor] control thread has ended
[2026-05-29 05:51:53] 2026-05-29 03:51:47,969 | INFO     | all workflow threads have been joined
[2026-05-29 05:51:53] 2026-05-29 03:51:47,970 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-29 05:51:53] 2026-05-29 03:51:47,970 | INFO     | traces error code: 0
[2026-05-29 05:51:53] 2026-05-29 03:51:47,970 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-29 05:51:53] 2026-05-29 03:51:48,382 [wrapper] ==== pilot stdout END ====
[2026-05-29 05:51:53] 2026-05-29 03:51:48,481 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-29 05:51:53] 2026-05-29 03:51:48,590 [wrapper] pilotpid: 28970
[2026-05-29 05:51:53] 2026-05-29 03:51:48,662 [wrapper] Pilot exit status: 0
[2026-05-29 05:51:53] 2026-05-29 03:51:49,194 [wrapper] pandaids: 7157302694
[2026-05-29 05:51:53] 2026-05-29 03:51:50,269 [wrapper] cleanup supervisor_pilot  7539 28971
[2026-05-29 05:51:53] 2026-05-29 03:51:50,367 [wrapper] Test setup, not cleaning
[2026-05-29 05:51:53] 2026-05-29 03:51:50,438 [wrapper] apfmon messages muted
[2026-05-29 05:51:53] 2026-05-29 03:51:50,504 [wrapper] ==== wrapper stdout END ====
[2026-05-29 05:51:53] 2026-05-29 03:51:50,564 [wrapper] ==== wrapper stderr END ====
[2026-05-29 05:51:53]  *** Error codes and diagnostics ***
[2026-05-29 05:51:53]     "exeErrorCode": 0,
[2026-05-29 05:51:53]     "pilotErrorCode": 0,
[2026-05-29 05:51:53]  *** Listing of results directory ***
[2026-05-29 05:51:53] total 431176
[2026-05-29 05:51:53] -rw-r--r--. 1 boinc boinc    709501 May 28 18:36 pilot3.tar.gz
[2026-05-29 05:51:53] -rw-r--r--. 1 boinc boinc      5631 May 28 18:49 queuedata.json
[2026-05-29 05:51:53] -rwx------. 1 boinc boinc     36281 May 28 18:50 runpilot2-wrapper.sh
[2026-05-29 05:51:53] -rw-r--r--. 1 boinc boinc       100 May 29 01:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-29 05:51:53] -rwxr-xr-x. 1 boinc boinc      7986 May 29 01:58 run_atlas
[2026-05-29 05:51:53] -rw-r--r--. 1 boinc boinc       105 May 29 01:58 job.xml
[2026-05-29 05:51:53] -rw-r--r--. 1 boinc boinc      6306 May 29 01:58 init_data.xml
[2026-05-29 05:51:53] -rw-r--r--. 2 boinc boinc 263434603 May 29 01:58 EVNT.49539563._000596.pool.root.1
[2026-05-29 05:51:53] -rw-r--r--. 2 boinc boinc     15667 May 29 01:58 start_atlas.sh
[2026-05-29 05:51:53] drwxrwx--x. 2 boinc boinc        68 May 29 01:58 shared
[2026-05-29 05:51:53] -rw-r--r--. 2 boinc boinc    722751 May 29 01:58 input.tar.gz
[2026-05-29 05:51:53] -rw-r--r--. 1 boinc boinc         0 May 29 01:58 boinc_lockfile
[2026-05-29 05:51:53] -rw-r--r--. 1 boinc boinc      2568 May 29 01:59 pandaJob.out
[2026-05-29 05:51:53] -rw-------. 1 boinc boinc   1251485 May 29 02:03 cric_ddmendpoints.json
[2026-05-29 05:51:53] -rw-------. 1 boinc boinc       415 May 29 02:05 workernode_map.json
[2026-05-29 05:51:53] -rw-------. 1 boinc boinc    996137 May 29 02:05 agis_schedconf.cvmfs.json
[2026-05-29 05:51:53] drwx------. 5 boinc boinc      4096 May 29 02:05 pilot3
[2026-05-29 05:51:53] -rw-------. 1 boinc boinc 170885982 May 29 05:49 HITS.49545102._014769.pool.root.1
[2026-05-29 05:51:53] -rw-r--r--. 1 boinc boinc       489 May 29 05:49 boinc_task_state.xml
[2026-05-29 05:51:53] -rw-------. 1 boinc boinc      1029 May 29 05:50 memory_monitor_summary.json
[2026-05-29 05:51:53] -rw-------. 1 boinc boinc         0 May 29 05:50 agis_ddmendpoints.agis.ALL.json
[2026-05-29 05:51:53] -rw-------. 1 boinc boinc    380965 May 29 05:50 log.49545102._014769.job.log.tgz.1
[2026-05-29 05:51:53] -rw-------. 1 boinc boinc        95 May 29 05:50 pilot_heartbeat.json
[2026-05-29 05:51:53] -rw-------. 1 boinc boinc      6395 May 29 05:50 heartbeat_new.json
[2026-05-29 05:51:53] -rw-------. 1 boinc boinc      6286 May 29 05:50 heartbeat.json
[2026-05-29 05:51:53] -rw-r--r--. 1 boinc boinc      8192 May 29 05:51 boinc_mmap_file
[2026-05-29 05:51:53] -rw-r--r--. 1 boinc boinc        28 May 29 05:51 wrapper_checkpoint.txt
[2026-05-29 05:51:53] -rw-------. 1 boinc boinc      4883 May 29 05:51 pilotlog.txt
[2026-05-29 05:51:53] -rw-------. 1 boinc boinc   1262122 May 29 05:51 log.49545102._014769.job.log.1
[2026-05-29 05:51:53] -rw-------. 1 boinc boinc       357 May 29 05:51 output.list
[2026-05-29 05:51:53] -rw-r--r--. 1 boinc boinc       410 May 29 05:51 runtime_log
[2026-05-29 05:51:53] -rw-------. 1 boinc boinc   1658880 May 29 05:51 result.tar.gz
[2026-05-29 05:51:53] -rw-r--r--. 1 boinc boinc      8439 May 29 05:51 runtime_log.err
[2026-05-29 05:51:53] -rw-------. 1 boinc boinc       656 May 29 05:51 723c3f307a43.diag
[2026-05-29 05:51:53] -rw-r--r--. 1 boinc boinc     20637 May 29 05:51 stderr.txt
[2026-05-29 05:51:53] HITS file was successfully produced:
[2026-05-29 05:51:53] -rw-------. 1 boinc boinc 170885982 May 29 05:49 shared/HITS.pool.root.1
[2026-05-29 05:51:53]  *** Contents of shared directory: ***
[2026-05-29 05:51:53] total 426492
[2026-05-29 05:51:53] -rw-r--r--. 2 boinc boinc 263434603 May 29 01:58 ATLAS.root_0
[2026-05-29 05:51:53] -rw-r--r--. 2 boinc boinc     15667 May 29 01:58 start_atlas.sh
[2026-05-29 05:51:53] -rw-r--r--. 2 boinc boinc    722751 May 29 01:58 input.tar.gz
[2026-05-29 05:51:53] -rw-------. 1 boinc boinc 170885982 May 29 05:49 HITS.pool.root.1
[2026-05-29 05:51:53] -rw-------. 1 boinc boinc   1658880 May 29 05:51 result.tar.gz
05:51:54 (24952): run_atlas exited; CPU time 50049.915360
05:51:54 (24952): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN