Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:32:02 (31309): wrapper (7.7.26015): starting
02:32:02 (31309): wrapper: running run_atlas (--nthreads 8)
[2026-05-29 02:32:02] Arguments: --nthreads 8
[2026-05-29 02:32:02] Threads: 8
[2026-05-29 02:32:02] Checking for CVMFS
[2026-05-29 02:32:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-29 02:32:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-29 02:32:03] Running cvmfs_config stat atlas.cern.ch
[2026-05-29 02:32:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-29 02:32:05] 2.11.2.0 29547 62386 104748 159914 2 54 18560010 25165825 1027 130560 0 29712236 99.940 13348400 6620 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-29 02:32:05] CVMFS is ok
[2026-05-29 02:32:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-29 02:32:05] Checking for apptainer binary...
[2026-05-29 02:32:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-29 02:32:05] Running /usr/bin/apptainer --version
[2026-05-29 02:32:05] apptainer version 1.3.2-1.el7
[2026-05-29 02:32:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-29 02:32:31] cg-vwn274.simple-grid.lan
[2026-05-29 02:32:31] apptainer works
[2026-05-29 02:32:31] Set ATHENA_PROC_NUMBER=8
[2026-05-29 02:32:31] Set ATHENA_CORE_NUMBER=8
[2026-05-29 02:32:31] Starting ATLAS job with PandaID=7156143816
[2026-05-29 02:32:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-29 06:05:51]  *** The last 200 lines of the pilot log: ***
[2026-05-29 06:05:51] 2026-05-29 04:05:31,263 | INFO     | extracted standard memory fields from prmon json
[2026-05-29 06:05:51] 2026-05-29 04:05:31,263 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-29 06:05:51] 2026-05-29 04:05:31,263 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-29 06:05:51] 2026-05-29 04:05:31,268 | INFO     | fitting pss+swap vs Time
[2026-05-29 06:05:51] 2026-05-29 04:05:31,269 | INFO     | sum of square deviations: 2406926989.5
[2026-05-29 06:05:51] 2026-05-29 04:05:31,270 | INFO     | sum of deviations: 158378289918.50003
[2026-05-29 06:05:51] 2026-05-29 04:05:31,270 | INFO     | mean x (centered): 0.0
[2026-05-29 06:05:51] 2026-05-29 04:05:31,271 | INFO     | mean y: 2394012.742424242
[2026-05-29 06:05:51] 2026-05-29 04:05:31,271 | INFO     | intersect: 2394012.742424242
[2026-05-29 06:05:51] 2026-05-29 04:05:31,271 | INFO     | chi2: 11.7788193108825
[2026-05-29 06:05:51] 2026-05-29 04:05:31,271 | INFO     | sum of square deviations: 2229146912.0
[2026-05-29 06:05:51] 2026-05-29 04:05:31,273 | INFO     | sum of deviations: 154008931807.00003
[2026-05-29 06:05:51] 2026-05-29 04:05:31,273 | INFO     | mean x (centered): 0.0
[2026-05-29 06:05:51] 2026-05-29 04:05:31,273 | INFO     | mean y: 2390263.917098446
[2026-05-29 06:05:51] 2026-05-29 04:05:31,273 | INFO     | intersect: 2390263.917098446
[2026-05-29 06:05:51] 2026-05-29 04:05:31,274 | INFO     | chi2: 11.818959275628664
[2026-05-29 06:05:51] 2026-05-29 04:05:31,274 | INFO     | current chi2=11.818959275628664 (change=-0.34078088547532337 %)
[2026-05-29 06:05:51] 2026-05-29 04:05:31,274 | INFO     | right removable region: 192
[2026-05-29 06:05:51] 2026-05-29 04:05:31,274 | INFO     | sum of square deviations: 2229146912.0
[2026-05-29 06:05:51] 2026-05-29 04:05:31,276 | INFO     | sum of deviations: 86501506890.0
[2026-05-29 06:05:51] 2026-05-29 04:05:31,276 | INFO     | mean x (centered): 0.0
[2026-05-29 06:05:51] 2026-05-29 04:05:31,276 | INFO     | mean y: 2455677.829015544
[2026-05-29 06:05:51] 2026-05-29 04:05:31,276 | INFO     | intersect: 2455677.829015544
[2026-05-29 06:05:51] 2026-05-29 04:05:31,277 | INFO     | chi2: 5.498528590353059
[2026-05-29 06:05:51] 2026-05-29 04:05:31,277 | INFO     | current chi2=5.498528590353059 (change=53.318508033543345 %)
[2026-05-29 06:05:51] 2026-05-29 04:05:31,277 | INFO     | sum of square deviations: 2060343747.0
[2026-05-29 06:05:51] 2026-05-29 04:05:31,279 | INFO     | sum of deviations: 25518794777.999996
[2026-05-29 06:05:51] 2026-05-29 04:05:31,279 | INFO     | mean x (centered): 0.0
[2026-05-29 06:05:51] 2026-05-29 04:05:31,279 | INFO     | mean y: 2510738.787234043
[2026-05-29 06:05:51] 2026-05-29 04:05:31,279 | INFO     | intersect: 2510738.787234043
[2026-05-29 06:05:51] 2026-05-29 04:05:31,280 | INFO     | chi2: 1.477821417912023
[2026-05-29 06:05:51] 2026-05-29 04:05:31,280 | INFO     | current chi2=1.477821417912023 (change=73.12332938479578 %)
[2026-05-29 06:05:51] 2026-05-29 04:05:31,280 | INFO     | sum of square deviations: 1900284932.0
[2026-05-29 06:05:51] 2026-05-29 04:05:31,282 | INFO     | sum of deviations: -7270786847.000001
[2026-05-29 06:05:51] 2026-05-29 04:05:31,282 | INFO     | mean x (centered): 0.0
[2026-05-29 06:05:51] 2026-05-29 04:05:31,282 | INFO     | mean y: 2541745.5191256832
[2026-05-29 06:05:51] 2026-05-29 04:05:31,282 | INFO     | intersect: 2541745.5191256832
[2026-05-29 06:05:51] 2026-05-29 04:05:31,282 | INFO     | chi2: 0.10639412198296301
[2026-05-29 06:05:51] 2026-05-29 04:05:31,283 | INFO     | current chi2=0.10639412198296301 (change=92.8006103651357 %)
[2026-05-29 06:05:51] 2026-05-29 04:05:31,283 | INFO     | sum of square deviations: 1748737904.5
[2026-05-29 06:05:51] 2026-05-29 04:05:31,284 | INFO     | sum of deviations: -6158635243.500002
[2026-05-29 06:05:51] 2026-05-29 04:05:31,285 | INFO     | mean x (centered): 0.0
[2026-05-29 06:05:51] 2026-05-29 04:05:31,285 | INFO     | mean y: 2540562.870786517
[2026-05-29 06:05:51] 2026-05-29 04:05:31,285 | INFO     | intersect: 2540562.870786517
[2026-05-29 06:05:51] 2026-05-29 04:05:31,285 | INFO     | chi2: 0.08716405711244479
[2026-05-29 06:05:51] 2026-05-29 04:05:31,285 | INFO     | current chi2=0.08716405711244479 (change=18.074367748997965 %)
[2026-05-29 06:05:51] 2026-05-29 04:05:31,286 | INFO     | left removable region: 20
[2026-05-29 06:05:51] 2026-05-29 04:05:31,286 | INFO     | sum of square deviations: 1577789583.0
[2026-05-29 06:05:51] 2026-05-29 04:05:31,287 | INFO     | sum of deviations: -6098023752.499999
[2026-05-29 06:05:51] 2026-05-29 04:05:31,287 | INFO     | mean x (centered): 0.0
[2026-05-29 06:05:51] 2026-05-29 04:05:31,287 | INFO     | mean y: 2540627.7965116277
[2026-05-29 06:05:51] 2026-05-29 04:05:31,288 | INFO     | intersect: 2540627.7965116277
[2026-05-29 06:05:51] 2026-05-29 04:05:31,288 | INFO     | chi2: 0.08681112834741259
[2026-05-29 06:05:51] 2026-05-29 04:05:31,288 | INFO     | current memory leak: -3.86 B/s (using 172 data points, chi2=0.09)
[2026-05-29 06:05:51] 2026-05-29 04:05:31,289 | INFO     | could have reported an average CPU frequency of 1999 MHz (10 samples)
[2026-05-29 06:05:51] 2026-05-29 04:05:31,290 | INFO     | ..............................
[2026-05-29 06:05:51] 2026-05-29 04:05:31,291 | INFO     | . Timing measurements:
[2026-05-29 06:05:51] 2026-05-29 04:05:31,291 | INFO     | . get job = 0 s
[2026-05-29 06:05:51] 2026-05-29 04:05:31,291 | INFO     | . initial setup = 110 s
[2026-05-29 06:05:51] 2026-05-29 04:05:31,291 | INFO     | . payload setup = 222 s
[2026-05-29 06:05:51] 2026-05-29 04:05:31,291 | INFO     | . stage-in = 0 s
[2026-05-29 06:05:51] 2026-05-29 04:05:31,291 | INFO     | . payload execution = 12186 s
[2026-05-29 06:05:51] 2026-05-29 04:05:31,291 | INFO     | . stage-out = 1 s
[2026-05-29 06:05:51] 2026-05-29 04:05:31,291 | INFO     | . log creation = 0 s
[2026-05-29 06:05:51] 2026-05-29 04:05:31,291 | INFO     | ..............................
[2026-05-29 06:05:51] 2026-05-29 04:05:31,402 | INFO     | 
[2026-05-29 06:05:51] 2026-05-29 04:05:31,403 | INFO     | job summary report
[2026-05-29 06:05:51] 2026-05-29 04:05:31,403 | INFO     | --------------------------------------------------
[2026-05-29 06:05:51] 2026-05-29 04:05:31,403 | INFO     | PanDA job id: 7156143816
[2026-05-29 06:05:51] 2026-05-29 04:05:31,403 | INFO     | task id: 49545102
[2026-05-29 06:05:51] 2026-05-29 04:05:31,403 | INFO     | errors: (none)
[2026-05-29 06:05:51] 2026-05-29 04:05:31,403 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-29 06:05:51] 2026-05-29 04:05:31,403 | INFO     | pilot state: finished 
[2026-05-29 06:05:51] 2026-05-29 04:05:31,403 | INFO     | transexitcode: 0
[2026-05-29 06:05:51] 2026-05-29 04:05:31,404 | INFO     | exeerrorcode: 0
[2026-05-29 06:05:51] 2026-05-29 04:05:31,404 | INFO     | exeerrordiag: 
[2026-05-29 06:05:51] 2026-05-29 04:05:31,404 | INFO     | exitcode: 0
[2026-05-29 06:05:51] 2026-05-29 04:05:31,404 | INFO     | exitmsg: OK
[2026-05-29 06:05:51] 2026-05-29 04:05:31,404 | INFO     | cpuconsumptiontime: 54104 s
[2026-05-29 06:05:51] 2026-05-29 04:05:31,404 | INFO     | nevents: 400
[2026-05-29 06:05:51] 2026-05-29 04:05:31,404 | INFO     | neventsw: 0
[2026-05-29 06:05:51] 2026-05-29 04:05:31,404 | INFO     | pid: 7371
[2026-05-29 06:05:51] 2026-05-29 04:05:31,404 | INFO     | pgrp: 7371
[2026-05-29 06:05:51] 2026-05-29 04:05:31,405 | INFO     | corecount: 8
[2026-05-29 06:05:51] 2026-05-29 04:05:31,405 | INFO     | event service: False
[2026-05-29 06:05:51] 2026-05-29 04:05:31,405 | INFO     | sizes: {0: 2265182, 1: 2233841, 2: 2267696, 12: 2267696, 12412: 2297530, 12415: 2306528, 12417: 2306712, 12420: 2306906}
[2026-05-29 06:05:51] 2026-05-29 04:05:31,405 | INFO     | --------------------------------------------------
[2026-05-29 06:05:51] 2026-05-29 04:05:31,405 | INFO     | 
[2026-05-29 06:05:51] 2026-05-29 04:05:31,405 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-05-29 06:05:51] 2026-05-29 04:05:31,438 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-29 06:05:51] 2026-05-29 04:05:31,438 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-29 06:05:51] 2026-05-29 04:05:31,438 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-29 06:05:51] 2026-05-29 04:05:31,439 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-29 06:05:51] 2026-05-29 04:05:31,439 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-29 06:05:51] 2026-05-29 04:05:31,439 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-29 06:05:51] 2026-05-29 04:05:31,439 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-29 06:05:51] 2026-05-29 04:05:31,439 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-29 06:05:51] 2026-05-29 04:05:31,439 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-29 06:05:51] 2026-05-29 04:05:31,439 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-29 06:05:51] 2026-05-29 04:05:31,439 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-29 06:05:51] 2026-05-29 04:05:31,440 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-29 06:05:51] 2026-05-29 04:05:31,440 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-29 06:05:51] 2026-05-29 04:05:31,440 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-29 06:05:51] 2026-05-29 04:05:31,440 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-29 06:05:51] 2026-05-29 04:05:31,440 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-29 06:05:51] 2026-05-29 04:05:31,441 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-29 06:05:51] 2026-05-29 04:05:31,441 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-29 06:05:51] 2026-05-29 04:05:31,441 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-29 06:05:51] 2026-05-29 04:05:31,441 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-29 06:05:51] 2026-05-29 04:05:31,441 | INFO     | job 7156143816 has completed (purged errors)
[2026-05-29 06:05:51] 2026-05-29 04:05:31,442 | INFO     | overall cleanup function is called
[2026-05-29 06:05:51] 2026-05-29 04:05:32,450 | INFO     | --- collectZombieJob: --- 10, [7371]
[2026-05-29 06:05:51] 2026-05-29 04:05:32,450 | INFO     | zombie collector waiting for pid 7371
[2026-05-29 06:05:51] 2026-05-29 04:05:32,450 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-29 06:05:51] 2026-05-29 04:05:32,450 | INFO     | collected zombie processes
[2026-05-29 06:05:51] 2026-05-29 04:05:32,451 | INFO     | will attempt to kill all subprocesses of pid=7371
[2026-05-29 06:05:51] 2026-05-29 04:05:32,504 | INFO     | process IDs to be killed: [7371] (in reverse order)
[2026-05-29 06:05:51] 2026-05-29 04:05:32,563 | WARNING  | found no corresponding commands to process id(s)
[2026-05-29 06:05:51] 2026-05-29 04:05:32,564 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-29 06:05:51] 2026-05-29 04:05:32,566 | INFO     | did not find any defunct processes belonging to 7371
[2026-05-29 06:05:51] 2026-05-29 04:05:32,568 | INFO     | did not find any defunct processes belonging to 7371
[2026-05-29 06:05:51] 2026-05-29 04:05:32,568 | INFO     | Ready for new job
[2026-05-29 06:05:51] 2026-05-29 04:05:32,570 | INFO     | ***************************************
[2026-05-29 06:05:51] 2026-05-29 04:05:32,570 | INFO     | ***  PanDA Pilot version 3.13.1.30  ***
[2026-05-29 06:05:51] 2026-05-29 04:05:32,570 | INFO     | ***************************************
[2026-05-29 06:05:51] 2026-05-29 04:05:32,570 | INFO     | 
[2026-05-29 06:05:51] 2026-05-29 04:05:32,571 | INFO     | pilot is running in a VM
[2026-05-29 06:05:51] 2026-05-29 04:05:32,571 | INFO     | architecture information:
[2026-05-29 06:05:51] 2026-05-29 04:05:32,571 | INFO     | executing command: cat /etc/os-release
[2026-05-29 06:05:51] 2026-05-29 04:05:32,589 | INFO     | cat /etc/os-release:
[2026-05-29 06:05:51] NAME="CentOS Linux"
[2026-05-29 06:05:51] VERSION="7 (Core)"
[2026-05-29 06:05:51] ID="centos"
[2026-05-29 06:05:51] ID_LIKE="rhel fedora"
[2026-05-29 06:05:51] VERSION_ID="7"
[2026-05-29 06:05:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-29 06:05:51] ANSI_COLOR="0;31"
[2026-05-29 06:05:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-29 06:05:51] HOME_URL="https://www.centos.org/"
[2026-05-29 06:05:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-29 06:05:51] 
[2026-05-29 06:05:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-29 06:05:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-29 06:05:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-29 06:05:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-29 06:05:51] 
[2026-05-29 06:05:51] 2026-05-29 04:05:32,589 | INFO     | ***************************************
[2026-05-29 06:05:51] 2026-05-29 04:05:33,093 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-05-29 06:05:51] 2026-05-29 04:05:33,115 | INFO     | sufficient remaining disk space (497457037312 B)
[2026-05-29 06:05:51] 2026-05-29 04:05:33,116 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-29 06:05:51] 2026-05-29 04:05:33,116 | INFO     | current server update state: UPDATING_FINAL
[2026-05-29 06:05:51] 2026-05-29 04:05:33,116 | INFO     | update_server=False
[2026-05-29 06:05:51] 2026-05-29 04:05:33,116 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-29 06:05:51] 2026-05-29 04:05:33,117 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-29 06:05:51] 2026-05-29 04:05:33,117 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-05-29 06:05:51] 2026-05-29 04:05:33,117 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-29 06:05:51] 2026-05-29 04:05:33,118 | INFO     | aborting loop
[2026-05-29 06:05:51] 2026-05-29 04:05:33,118 | INFO     | found 0 job(s) in 20 queues
[2026-05-29 06:05:51] 2026-05-29 04:05:33,119 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-29 06:05:51] 2026-05-29 04:05:33,119 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-29 06:05:51] 2026-05-29 04:05:33,374 | INFO     | all job control threads have been joined
[2026-05-29 06:05:51] 2026-05-29 04:05:33,521 | INFO     | all data control threads have been joined
[2026-05-29 06:05:51] 2026-05-29 04:05:34,122 | INFO     | [job] retrieve thread has finished
[2026-05-29 06:05:51] 2026-05-29 04:05:34,123 | INFO     | [job] queue monitor thread has finished
[2026-05-29 06:05:51] 2026-05-29 04:05:34,123 | INFO     | [data] copytool_in thread has finished
[2026-05-29 06:05:51] 2026-05-29 04:05:34,124 | INFO     | [job] job monitor thread has finished
[2026-05-29 06:05:51] 2026-05-29 04:05:34,220 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-29 06:05:51] 2026-05-29 04:05:34,250 | INFO     | [job] validate thread has finished
[2026-05-29 06:05:51] 2026-05-29 04:05:34,263 | INFO     | [payload] validate_post thread has finished
[2026-05-29 06:05:51] 2026-05-29 04:05:34,378 | INFO     | [job] create_data_payload thread has finished
[2026-05-29 06:05:51] 2026-05-29 04:05:34,380 | INFO     | [job] control thread has finished
[2026-05-29 06:05:51] 2026-05-29 04:05:34,430 | INFO     | [payload] failed_post thread has finished
[2026-05-29 06:05:51] 2026-05-29 04:05:34,527 | INFO     | [data] control thread has finished
[2026-05-29 06:05:51] 2026-05-29 04:05:34,539 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-29 06:05:51] 2026-05-29 04:05:34,586 | INFO     | all payload control threads have been joined
[2026-05-29 06:05:51] 2026-05-29 04:05:34,945 | INFO     | [payload] validate_pre thread has finished
[2026-05-29 06:05:51] 2026-05-29 04:05:35,115 | INFO     | [payload] execute_payloads thread has finished
[2026-05-29 06:05:51] 2026-05-29 04:05:35,591 | INFO     | [payload] control thread has finished
[2026-05-29 06:05:51] 2026-05-29 04:05:36,226 | INFO     | [data] copytool_out thread has finished
[2026-05-29 06:05:51] 2026-05-29 04:05:38,546 | INFO     | [data] queue_monitor thread has finished
[2026-05-29 06:05:51] 2026-05-29 04:05:39,510 | INFO     | [monitor] cgroup control has ended
[2026-05-29 06:05:51] 2026-05-29 04:05:43,724 | INFO     | job.realtimelogging is not enabled
[2026-05-29 06:05:51] 2026-05-29 04:05:44,730 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-29 06:05:51] 2026-05-29 04:05:46,215 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140481318680384)>', '<ExcThread(monitor, started 140480461403904)>']
[2026-05-29 06:05:51] 2026-05-29 04:05:47,193 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-29 06:05:51] 2026-05-29 04:05:47,193 | INFO     | [monitor] control thread has ended
[2026-05-29 06:05:51] 2026-05-29 04:05:51,237 | INFO     | all workflow threads have been joined
[2026-05-29 06:05:51] 2026-05-29 04:05:51,237 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-29 06:05:51] 2026-05-29 04:05:51,237 | INFO     | traces error code: 0
[2026-05-29 06:05:51] 2026-05-29 04:05:51,237 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-29 06:05:51] 2026-05-29 04:05:51,379 [wrapper] ==== pilot stdout END ====
[2026-05-29 06:05:51] 2026-05-29 04:05:51,386 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-29 06:05:51] 2026-05-29 04:05:51,395 [wrapper] pilotpid: 2923
[2026-05-29 06:05:51] 2026-05-29 04:05:51,399 [wrapper] Pilot exit status: 0
[2026-05-29 06:05:51] 2026-05-29 04:05:51,432 [wrapper] pandaids: 7156143816
[2026-05-29 06:05:51] 2026-05-29 04:05:51,480 [wrapper] cleanup supervisor_pilot 16748 2924
[2026-05-29 06:05:51] 2026-05-29 04:05:51,487 [wrapper] Test setup, not cleaning
[2026-05-29 06:05:51] 2026-05-29 04:05:51,495 [wrapper] apfmon messages muted
[2026-05-29 06:05:51] 2026-05-29 04:05:51,500 [wrapper] ==== wrapper stdout END ====
[2026-05-29 06:05:51] 2026-05-29 04:05:51,505 [wrapper] ==== wrapper stderr END ====
[2026-05-29 06:05:51]  *** Error codes and diagnostics ***
[2026-05-29 06:05:51]     "exeErrorCode": 0,
[2026-05-29 06:05:51]     "pilotErrorCode": 0,
[2026-05-29 06:05:51]  *** Listing of results directory ***
[2026-05-29 06:05:51] total 445204
[2026-05-29 06:05:51] -rw-r--r--. 1 boinc boinc    709501 May 28 13:51 pilot3.tar.gz
[2026-05-29 06:05:51] -rwx------. 1 boinc boinc     36281 May 28 13:54 runpilot2-wrapper.sh
[2026-05-29 06:05:51] -rw-r--r--. 1 boinc boinc      5631 May 28 13:55 queuedata.json
[2026-05-29 06:05:51] -rw-r--r--. 1 boinc boinc       100 May 29 02:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-29 06:05:51] -rwxr-xr-x. 1 boinc boinc      7986 May 29 02:32 run_atlas
[2026-05-29 06:05:51] -rw-r--r--. 1 boinc boinc       105 May 29 02:32 job.xml
[2026-05-29 06:05:51] -rw-r--r--. 1 boinc boinc      6305 May 29 02:32 init_data.xml
[2026-05-29 06:05:51] -rw-r--r--. 2 boinc boinc 265174372 May 29 02:32 EVNT.49539563._000559.pool.root.1
[2026-05-29 06:05:51] -rw-r--r--. 2 boinc boinc     15667 May 29 02:32 start_atlas.sh
[2026-05-29 06:05:51] drwxrwx--x. 2 boinc boinc        68 May 29 02:32 shared
[2026-05-29 06:05:51] -rw-r--r--. 2 boinc boinc    722747 May 29 02:32 input.tar.gz
[2026-05-29 06:05:51] -rw-r--r--. 1 boinc boinc         0 May 29 02:32 boinc_lockfile
[2026-05-29 06:05:51] -rw-r--r--. 1 boinc boinc      2569 May 29 02:32 pandaJob.out
[2026-05-29 06:05:51] -rw-------. 1 boinc boinc   1251485 May 29 02:36 cric_ddmendpoints.json
[2026-05-29 06:05:51] -rw-------. 1 boinc boinc       415 May 29 02:38 workernode_map.json
[2026-05-29 06:05:51] -rw-------. 1 boinc boinc    996137 May 29 02:38 agis_schedconf.cvmfs.json
[2026-05-29 06:05:51] drwx------. 5 boinc boinc      4096 May 29 02:38 pilot3
[2026-05-29 06:05:51] -rw-r--r--. 1 boinc boinc       489 May 29 06:04 boinc_task_state.xml
[2026-05-29 06:05:51] -rw-------. 1 boinc boinc 183743579 May 29 06:04 HITS.49545102._013650.pool.root.1
[2026-05-29 06:05:51] -rw-------. 1 boinc boinc        95 May 29 06:05 pilot_heartbeat.json
[2026-05-29 06:05:51] -rw-------. 1 boinc boinc      1033 May 29 06:05 memory_monitor_summary.json
[2026-05-29 06:05:51] -rw-------. 1 boinc boinc         0 May 29 06:05 agis_ddmendpoints.agis.ALL.json
[2026-05-29 06:05:51] -rw-------. 1 boinc boinc    369696 May 29 06:05 log.49545102._013650.job.log.tgz.1
[2026-05-29 06:05:51] -rw-------. 1 boinc boinc      6389 May 29 06:05 heartbeat_new.json
[2026-05-29 06:05:51] -rw-------. 1 boinc boinc      6280 May 29 06:05 heartbeat.json
[2026-05-29 06:05:51] -rw-r--r--. 1 boinc boinc      8192 May 29 06:05 boinc_mmap_file
[2026-05-29 06:05:51] -rw-r--r--. 1 boinc boinc        28 May 29 06:05 wrapper_checkpoint.txt
[2026-05-29 06:05:51] -rw-------. 1 boinc boinc      4686 May 29 06:05 pilotlog.txt
[2026-05-29 06:05:51] -rw-------. 1 boinc boinc   1161702 May 29 06:05 log.49545102._013650.job.log.1
[2026-05-29 06:05:51] -rw-------. 1 boinc boinc       357 May 29 06:05 output.list
[2026-05-29 06:05:51] -rw-r--r--. 1 boinc boinc       410 May 29 06:05 runtime_log
[2026-05-29 06:05:51] -rw-------. 1 boinc boinc   1546240 May 29 06:05 result.tar.gz
[2026-05-29 06:05:51] -rw-r--r--. 1 boinc boinc      8439 May 29 06:05 runtime_log.err
[2026-05-29 06:05:51] -rw-------. 1 boinc boinc       655 May 29 06:05 2d04ea712937.diag
[2026-05-29 06:05:51] -rw-r--r--. 1 boinc boinc     20396 May 29 06:05 stderr.txt
[2026-05-29 06:05:51] HITS file was successfully produced:
[2026-05-29 06:05:51] -rw-------. 1 boinc boinc 183743579 May 29 06:04 shared/HITS.pool.root.1
[2026-05-29 06:05:51]  *** Contents of shared directory: ***
[2026-05-29 06:05:51] total 440636
[2026-05-29 06:05:51] -rw-r--r--. 2 boinc boinc 265174372 May 29 02:32 ATLAS.root_0
[2026-05-29 06:05:51] -rw-r--r--. 2 boinc boinc     15667 May 29 02:32 start_atlas.sh
[2026-05-29 06:05:51] -rw-r--r--. 2 boinc boinc    722747 May 29 02:32 input.tar.gz
[2026-05-29 06:05:51] -rw-------. 1 boinc boinc 183743579 May 29 06:04 HITS.pool.root.1
[2026-05-29 06:05:51] -rw-------. 1 boinc boinc   1546240 May 29 06:05 result.tar.gz
06:05:53 (31309): run_atlas exited; CPU time 54210.194973
06:05:53 (31309): called boinc_finish(0)

</stderr_txt>
]]>

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