Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:33:17 (124900): wrapper (7.7.26015): starting
18:33:17 (124900): wrapper: running run_atlas (--nthreads 4)
[2026-05-28 18:33:17] Arguments: --nthreads 4
[2026-05-28 18:33:17] Threads: 4
[2026-05-28 18:33:17] Checking for CVMFS
[2026-05-28 18:33:17] No cvmfs_config command found, will try listing directly
[2026-05-28 18:33:17] CVMFS is ok
[2026-05-28 18:33:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-28 18:33:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-28 18:33:17] Further information can be found at the LHC@home message board.
[2026-05-28 18:33:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-28 18:33:17] Checking for apptainer binary...
[2026-05-28 18:33:17] which: no apptainer in ((null))
[2026-05-28 18:33:17] apptainer is not installed, using version from CVMFS
[2026-05-28 18:33:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-28 18:33:18] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot32/slots/41/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2026-05-28 18:33:18] apptainer works
[2026-05-28 18:33:18] Set ATHENA_PROC_NUMBER=4
[2026-05-28 18:33:18] Set ATHENA_CORE_NUMBER=4
[2026-05-28 18:33:18] Starting ATLAS job with PandaID=7157102965
[2026-05-28 18:33:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot32/slots/41 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-28 20:58:59]  *** The last 200 lines of the pilot log: ***
[2026-05-28 20:58:59] 2026-05-28 18:58:21,399 | INFO     | job 7157102965 has finished - writing final server update
[2026-05-28 20:58:59] 2026-05-28 18:58:21,399 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3520349/.job.ad'
[2026-05-28 20:58:59] 2026-05-28 18:58:21,399 | INFO     | total number of processed events: 400 (read)
[2026-05-28 20:58:59] 2026-05-28 18:58:21,423 | INFO     | using path: /var/lib/boinc/var/slot32/slots/41/PanDA_Pilot-7157102965/memory_monitor_summary.json (trf name=prmon)
[2026-05-28 20:58:59] 2026-05-28 18:58:21,424 | INFO     | extracted standard info from prmon json
[2026-05-28 20:58:59] 2026-05-28 18:58:21,424 | INFO     | extracted standard memory fields from prmon json
[2026-05-28 20:58:59] 2026-05-28 18:58:21,424 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-28 20:58:59] 2026-05-28 18:58:21,425 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-28 20:58:59] 2026-05-28 18:58:21,427 | INFO     | fitting pss+swap vs Time
[2026-05-28 20:58:59] 2026-05-28 18:58:21,427 | INFO     | sum of square deviations: 887813855.5
[2026-05-28 20:58:59] 2026-05-28 18:58:21,428 | INFO     | sum of deviations: 15037187470.0
[2026-05-28 20:58:59] 2026-05-28 18:58:21,428 | INFO     | mean x (centered): 0.0
[2026-05-28 20:58:59] 2026-05-28 18:58:21,428 | INFO     | mean y: 2327957.7183098593
[2026-05-28 20:58:59] 2026-05-28 18:58:21,428 | INFO     | intersect: 2327957.7183098593
[2026-05-28 20:58:59] 2026-05-28 18:58:21,429 | INFO     | chi2: 1.3463766129794794
[2026-05-28 20:58:59] 2026-05-28 18:58:21,429 | INFO     | sum of square deviations: 797291228.0
[2026-05-28 20:58:59] 2026-05-28 18:58:21,430 | INFO     | sum of deviations: 14444677878.0
[2026-05-28 20:58:59] 2026-05-28 18:58:21,430 | INFO     | mean x (centered): 0.0
[2026-05-28 20:58:59] 2026-05-28 18:58:21,430 | INFO     | mean y: 2326959.0729927006
[2026-05-28 20:58:59] 2026-05-28 18:58:21,430 | INFO     | intersect: 2326959.0729927006
[2026-05-28 20:58:59] 2026-05-28 18:58:21,430 | INFO     | chi2: 1.3479748286898585
[2026-05-28 20:58:59] 2026-05-28 18:58:21,430 | INFO     | current chi2=1.3479748286898585 (change=-0.11870495186649992 %)
[2026-05-28 20:58:59] 2026-05-28 18:58:21,430 | INFO     | right removable region: 136
[2026-05-28 20:58:59] 2026-05-28 18:58:21,431 | INFO     | sum of square deviations: 797291228.0
[2026-05-28 20:58:59] 2026-05-28 18:58:21,431 | INFO     | sum of deviations: -2919134992.000001
[2026-05-28 20:58:59] 2026-05-28 18:58:21,432 | INFO     | mean x (centered): 0.0
[2026-05-28 20:58:59] 2026-05-28 18:58:21,432 | INFO     | mean y: 2357653.116788321
[2026-05-28 20:58:59] 2026-05-28 18:58:21,432 | INFO     | intersect: 2357653.116788321
[2026-05-28 20:58:59] 2026-05-28 18:58:21,432 | INFO     | chi2: 0.009749847615004359
[2026-05-28 20:58:59] 2026-05-28 18:58:21,432 | INFO     | current chi2=0.009749847615004359 (change=99.27584544168305 %)
[2026-05-28 20:58:59] 2026-05-28 18:58:21,432 | INFO     | sum of square deviations: 713140813.0
[2026-05-28 20:58:59] 2026-05-28 18:58:21,433 | INFO     | sum of deviations: -2991035417.5
[2026-05-28 20:58:59] 2026-05-28 18:58:21,433 | INFO     | mean x (centered): 0.0
[2026-05-28 20:58:59] 2026-05-28 18:58:21,433 | INFO     | mean y: 2357741.75
[2026-05-28 20:58:59] 2026-05-28 18:58:21,433 | INFO     | intersect: 2357741.75
[2026-05-28 20:58:59] 2026-05-28 18:58:21,434 | INFO     | chi2: 0.00591685210023644
[2026-05-28 20:58:59] 2026-05-28 18:58:21,434 | INFO     | current chi2=0.00591685210023644 (change=39.313388948450815 %)
[2026-05-28 20:58:59] 2026-05-28 18:58:21,434 | INFO     | sum of square deviations: 635130048.0
[2026-05-28 20:58:59] 2026-05-28 18:58:21,435 | INFO     | sum of deviations: -2069740979.9999993
[2026-05-28 20:58:59] 2026-05-28 18:58:21,435 | INFO     | mean x (centered): 0.0
[2026-05-28 20:58:59] 2026-05-28 18:58:21,435 | INFO     | mean y: 2355938.5118110236
[2026-05-28 20:58:59] 2026-05-28 18:58:21,435 | INFO     | intersect: 2355938.5118110236
[2026-05-28 20:58:59] 2026-05-28 18:58:21,435 | INFO     | chi2: 0.005012036263017847
[2026-05-28 20:58:59] 2026-05-28 18:58:21,435 | INFO     | current chi2=0.005012036263017847 (change=15.292182766955353 %)
[2026-05-28 20:58:59] 2026-05-28 18:58:21,435 | INFO     | left removable region: 15
[2026-05-28 20:58:59] 2026-05-28 18:58:21,436 | INFO     | sum of square deviations: 549294020.0
[2026-05-28 20:58:59] 2026-05-28 18:58:21,436 | INFO     | sum of deviations: -2055262386.0
[2026-05-28 20:58:59] 2026-05-28 18:58:21,436 | INFO     | mean x (centered): 0.0
[2026-05-28 20:58:59] 2026-05-28 18:58:21,436 | INFO     | mean y: 2355969.338842975
[2026-05-28 20:58:59] 2026-05-28 18:58:21,436 | INFO     | intersect: 2355969.338842975
[2026-05-28 20:58:59] 2026-05-28 18:58:21,437 | INFO     | chi2: 0.00484148667157513
[2026-05-28 20:58:59] 2026-05-28 18:58:21,437 | INFO     | current memory leak: -3.74 B/s (using 121 data points, chi2=0.00)
[2026-05-28 20:58:59] 2026-05-28 18:58:21,437 | INFO     | could have reported an average CPU frequency of 2748 MHz (8 samples)
[2026-05-28 20:58:59] 2026-05-28 18:58:21,438 | INFO     | ..............................
[2026-05-28 20:58:59] 2026-05-28 18:58:21,438 | INFO     | . Timing measurements:
[2026-05-28 20:58:59] 2026-05-28 18:58:21,438 | INFO     | . get job = 0 s
[2026-05-28 20:58:59] 2026-05-28 18:58:21,438 | INFO     | . initial setup = 7 s
[2026-05-28 20:58:59] 2026-05-28 18:58:21,438 | INFO     | . payload setup = 14 s
[2026-05-28 20:58:59] 2026-05-28 18:58:21,438 | INFO     | . stage-in = 0 s
[2026-05-28 20:58:59] 2026-05-28 18:58:21,438 | INFO     | . payload execution = 8644 s
[2026-05-28 20:58:59] 2026-05-28 18:58:21,438 | INFO     | . stage-out = 0 s
[2026-05-28 20:58:59] 2026-05-28 18:58:21,438 | INFO     | . log creation = 0 s
[2026-05-28 20:58:59] 2026-05-28 18:58:21,438 | INFO     | ..............................
[2026-05-28 20:58:59] 2026-05-28 18:58:21,527 | INFO     | 
[2026-05-28 20:58:59] 2026-05-28 18:58:21,527 | INFO     | job summary report
[2026-05-28 20:58:59] 2026-05-28 18:58:21,528 | INFO     | --------------------------------------------------
[2026-05-28 20:58:59] 2026-05-28 18:58:21,528 | INFO     | PanDA job id: 7157102965
[2026-05-28 20:58:59] 2026-05-28 18:58:21,528 | INFO     | task id: 49545130
[2026-05-28 20:58:59] 2026-05-28 18:58:21,528 | INFO     | errors: (none)
[2026-05-28 20:58:59] 2026-05-28 18:58:21,528 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-28 20:58:59] 2026-05-28 18:58:21,528 | INFO     | pilot state: finished 
[2026-05-28 20:58:59] 2026-05-28 18:58:21,528 | INFO     | transexitcode: 0
[2026-05-28 20:58:59] 2026-05-28 18:58:21,528 | INFO     | exeerrorcode: 0
[2026-05-28 20:58:59] 2026-05-28 18:58:21,528 | INFO     | exeerrordiag: 
[2026-05-28 20:58:59] 2026-05-28 18:58:21,528 | INFO     | exitcode: 0
[2026-05-28 20:58:59] 2026-05-28 18:58:21,529 | INFO     | exitmsg: OK
[2026-05-28 20:58:59] 2026-05-28 18:58:21,529 | INFO     | cpuconsumptiontime: 32793 s
[2026-05-28 20:58:59] 2026-05-28 18:58:21,529 | INFO     | nevents: 400
[2026-05-28 20:58:59] 2026-05-28 18:58:21,529 | INFO     | neventsw: 0
[2026-05-28 20:58:59] 2026-05-28 18:58:21,529 | INFO     | pid: 135032
[2026-05-28 20:58:59] 2026-05-28 18:58:21,529 | INFO     | pgrp: 135032
[2026-05-28 20:58:59] 2026-05-28 18:58:21,529 | INFO     | corecount: 4
[2026-05-28 20:58:59] 2026-05-28 18:58:21,529 | INFO     | event service: False
[2026-05-28 20:58:59] 2026-05-28 18:58:21,529 | INFO     | sizes: {0: 2265900, 1: 2267729, 11: 2267729, 8662: 2296090, 8663: 2305112, 8667: 2305168, 8671: 2305490}
[2026-05-28 20:58:59] 2026-05-28 18:58:21,529 | INFO     | --------------------------------------------------
[2026-05-28 20:58:59] 2026-05-28 18:58:21,529 | INFO     | 
[2026-05-28 20:58:59] 2026-05-28 18:58:21,530 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot32/slots/41
[2026-05-28 20:58:59] 2026-05-28 18:58:21,565 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-28 20:58:59] 2026-05-28 18:58:21,565 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-28 20:58:59] 2026-05-28 18:58:21,565 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-28 20:58:59] 2026-05-28 18:58:21,565 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-28 20:58:59] 2026-05-28 18:58:21,566 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-28 20:58:59] 2026-05-28 18:58:21,566 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-28 20:58:59] 2026-05-28 18:58:21,566 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-28 20:58:59] 2026-05-28 18:58:21,566 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-28 20:58:59] 2026-05-28 18:58:21,566 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-28 20:58:59] 2026-05-28 18:58:21,566 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-28 20:58:59] 2026-05-28 18:58:21,566 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-28 20:58:59] 2026-05-28 18:58:21,566 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-28 20:58:59] 2026-05-28 18:58:21,566 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-28 20:58:59] 2026-05-28 18:58:21,566 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-28 20:58:59] 2026-05-28 18:58:21,567 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-28 20:58:59] 2026-05-28 18:58:21,567 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-28 20:58:59] 2026-05-28 18:58:21,567 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-28 20:58:59] 2026-05-28 18:58:21,567 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-28 20:58:59] 2026-05-28 18:58:21,567 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-28 20:58:59] 2026-05-28 18:58:21,567 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-28 20:58:59] 2026-05-28 18:58:21,567 | INFO     | job 7157102965 has completed (purged errors)
[2026-05-28 20:58:59] 2026-05-28 18:58:21,567 | INFO     | overall cleanup function is called
[2026-05-28 20:58:59] 2026-05-28 18:58:22,577 | INFO     | --- collectZombieJob: --- 10, [135032]
[2026-05-28 20:58:59] 2026-05-28 18:58:22,577 | INFO     | zombie collector waiting for pid 135032
[2026-05-28 20:58:59] 2026-05-28 18:58:22,577 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-28 20:58:59] 2026-05-28 18:58:22,578 | INFO     | collected zombie processes
[2026-05-28 20:58:59] 2026-05-28 18:58:22,578 | INFO     | will attempt to kill all subprocesses of pid=135032
[2026-05-28 20:58:59] 2026-05-28 18:58:23,280 | INFO     | process IDs to be killed: [135032] (in reverse order)
[2026-05-28 20:58:59] 2026-05-28 18:58:23,613 | WARNING  | found no corresponding commands to process id(s)
[2026-05-28 20:58:59] 2026-05-28 18:58:23,614 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-28 20:58:59] 2026-05-28 18:58:23,646 | INFO     | did not find any defunct processes belonging to 135032
[2026-05-28 20:58:59] 2026-05-28 18:58:23,673 | INFO     | did not find any defunct processes belonging to 135032
[2026-05-28 20:58:59] 2026-05-28 18:58:23,674 | INFO     | Ready for new job
[2026-05-28 20:58:59] 2026-05-28 18:58:23,676 | INFO     | ***************************************
[2026-05-28 20:58:59] 2026-05-28 18:58:23,676 | INFO     | ***  PanDA Pilot version 3.13.1.30  ***
[2026-05-28 20:58:59] 2026-05-28 18:58:23,676 | INFO     | ***************************************
[2026-05-28 20:58:59] 2026-05-28 18:58:23,676 | INFO     | 
[2026-05-28 20:58:59] 2026-05-28 18:58:23,685 | INFO     | architecture information:
[2026-05-28 20:58:59] 2026-05-28 18:58:23,685 | INFO     | executing command: cat /etc/os-release
[2026-05-28 20:58:59] 2026-05-28 18:58:23,710 | INFO     | cat /etc/os-release:
[2026-05-28 20:58:59] NAME="CentOS Linux"
[2026-05-28 20:58:59] VERSION="7 (Core)"
[2026-05-28 20:58:59] ID="centos"
[2026-05-28 20:58:59] ID_LIKE="rhel fedora"
[2026-05-28 20:58:59] VERSION_ID="7"
[2026-05-28 20:58:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-28 20:58:59] ANSI_COLOR="0;31"
[2026-05-28 20:58:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-28 20:58:59] HOME_URL="https://www.centos.org/"
[2026-05-28 20:58:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-28 20:58:59] 
[2026-05-28 20:58:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-28 20:58:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-28 20:58:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-28 20:58:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-28 20:58:59] 
[2026-05-28 20:58:59] 2026-05-28 18:58:23,710 | INFO     | ***************************************
[2026-05-28 20:58:59] 2026-05-28 18:58:24,213 | INFO     | executing command: df -mP /var/lib/boinc/var/slot32/slots/41
[2026-05-28 20:58:59] 2026-05-28 18:58:24,240 | INFO     | sufficient remaining disk space (319100551168 B)
[2026-05-28 20:58:59] 2026-05-28 18:58:24,241 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-28 20:58:59] 2026-05-28 18:58:24,241 | INFO     | current server update state: UPDATING_FINAL
[2026-05-28 20:58:59] 2026-05-28 18:58:24,241 | INFO     | update_server=False
[2026-05-28 20:58:59] 2026-05-28 18:58:24,241 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-28 20:58:59] 2026-05-28 18:58:24,241 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-28 20:58:59] 2026-05-28 18:58:24,589 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-28 20:58:59] 2026-05-28 18:58:24,589 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-28 20:58:59] 2026-05-28 18:58:24,589 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-28 20:58:59] 2026-05-28 18:58:24,589 | INFO     | will abort loop
[2026-05-28 20:58:59] 2026-05-28 18:58:24,908 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-28 20:58:59] 2026-05-28 18:58:25,015 | INFO     | all data control threads have been joined
[2026-05-28 20:58:59] 2026-05-28 18:58:25,034 | INFO     | all job control threads have been joined
[2026-05-28 20:58:59] 2026-05-28 18:58:25,246 | INFO     | [job] retrieve thread has finished
[2026-05-28 20:58:59] 2026-05-28 18:58:25,456 | INFO     | [job] validate thread has finished
[2026-05-28 20:58:59] 2026-05-28 18:58:25,543 | INFO     | all payload control threads have been joined
[2026-05-28 20:58:59] 2026-05-28 18:58:25,594 | INFO     | [job] job monitor thread has finished
[2026-05-28 20:58:59] 2026-05-28 18:58:25,698 | INFO     | [payload] validate_post thread has finished
[2026-05-28 20:58:59] 2026-05-28 18:58:25,771 | INFO     | [job] create_data_payload thread has finished
[2026-05-28 20:58:59] 2026-05-28 18:58:25,806 | INFO     | [payload] validate_pre thread has finished
[2026-05-28 20:58:59] 2026-05-28 18:58:26,019 | INFO     | [data] control thread has finished
[2026-05-28 20:58:59] 2026-05-28 18:58:26,039 | INFO     | [job] control thread has finished
[2026-05-28 20:58:59] 2026-05-28 18:58:26,258 | INFO     | [data] copytool_in thread has finished
[2026-05-28 20:58:59] 2026-05-28 18:58:26,326 | INFO     | [payload] failed_post thread has finished
[2026-05-28 20:58:59] 2026-05-28 18:58:26,401 | INFO     | [payload] execute_payloads thread has finished
[2026-05-28 20:58:59] 2026-05-28 18:58:26,538 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-28 20:58:59] 2026-05-28 18:58:26,549 | INFO     | [payload] control thread has finished
[2026-05-28 20:58:59] 2026-05-28 18:58:26,913 | INFO     | [data] copytool_out thread has finished
[2026-05-28 20:58:59] 2026-05-28 18:58:27,543 | INFO     | [job] queue monitor thread has finished
[2026-05-28 20:58:59] 2026-05-28 18:58:28,247 | INFO     | [data] queue_monitor thread has finished
[2026-05-28 20:58:59] 2026-05-28 18:58:34,747 | INFO     | job.realtimelogging is not enabled
[2026-05-28 20:58:59] 2026-05-28 18:58:35,752 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-28 20:58:59] 2026-05-28 18:58:53,055 | INFO     | [monitor] cgroup control has ended
[2026-05-28 20:58:59] 2026-05-28 18:58:53,951 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23405235291968)>', '<ExcThread(monitor, started 23404933519104)>']
[2026-05-28 20:58:59] 2026-05-28 18:58:54,379 | INFO     | PID=129254 has CPU usage=11.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-28 20:58:59] 2026-05-28 18:58:54,380 | INFO     | .. there are 23 such processes running
[2026-05-28 20:58:59] 2026-05-28 18:58:54,380 | INFO     | found 0 job(s) in 20 queues
[2026-05-28 20:58:59] 2026-05-28 18:58:54,380 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-28 20:58:59] 2026-05-28 18:58:54,380 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-28 20:58:59] 2026-05-28 18:58:54,380 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-28 20:58:59] 2026-05-28 18:58:54,380 | INFO     | [monitor] control thread has ended
[2026-05-28 20:58:59] 2026-05-28 18:58:58,977 | INFO     | all workflow threads have been joined
[2026-05-28 20:58:59] 2026-05-28 18:58:58,977 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-28 20:58:59] 2026-05-28 18:58:58,977 | INFO     | traces error code: 0
[2026-05-28 20:58:59] 2026-05-28 18:58:58,978 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-28 20:58:59] 2026-05-28 18:58:59,154 [wrapper] ==== pilot stdout END ====
[2026-05-28 20:58:59] 2026-05-28 18:58:59,158 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-28 20:58:59] 2026-05-28 18:58:59,162 [wrapper] pilotpid: 129254
[2026-05-28 20:58:59] 2026-05-28 18:58:59,166 [wrapper] Pilot exit status: 0
[2026-05-28 20:58:59] 2026-05-28 18:58:59,183 [wrapper] pandaids: 7157102965
[2026-05-28 20:58:59] 2026-05-28 18:58:59,387 [wrapper] cleanup supervisor_pilot  468622 129255
[2026-05-28 20:58:59] 2026-05-28 18:58:59,392 [wrapper] Test setup, not cleaning
[2026-05-28 20:58:59] 2026-05-28 18:58:59,395 [wrapper] apfmon messages muted
[2026-05-28 20:58:59] 2026-05-28 18:58:59,399 [wrapper] ==== wrapper stdout END ====
[2026-05-28 20:58:59] 2026-05-28 18:58:59,403 [wrapper] ==== wrapper stderr END ====
[2026-05-28 20:58:59]  *** Error codes and diagnostics ***
[2026-05-28 20:58:59]     "exeErrorCode": 0,
[2026-05-28 20:58:59]     "pilotErrorCode": 0,
[2026-05-28 20:58:59]  *** Listing of results directory ***
[2026-05-28 20:58:59] total 454764
[2026-05-28 20:58:59] -rw-r--r--. 1 boinc boinc    709501 May 28 16:33 pilot3.tar.gz
[2026-05-28 20:58:59] -rwx------. 1 boinc boinc     36281 May 28 16:40 runpilot2-wrapper.sh
[2026-05-28 20:58:59] -rw-r--r--. 1 boinc boinc      5631 May 28 16:40 queuedata.json
[2026-05-28 20:58:59] -rw-r--r--. 1 boinc boinc       100 May 28 18:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-28 20:58:59] -rwxr-xr-x. 1 boinc boinc      7986 May 28 18:33 run_atlas
[2026-05-28 20:58:59] -rw-r--r--. 1 boinc boinc       105 May 28 18:33 job.xml
[2026-05-28 20:58:59] -rw-r--r--. 2 boinc boinc 278755235 May 28 18:33 EVNT.49539717._000755.pool.root.1
[2026-05-28 20:58:59] -rw-r--r--. 1 boinc boinc      6539 May 28 18:33 init_data.xml
[2026-05-28 20:58:59] -rw-r--r--. 2 boinc boinc     15667 May 28 18:33 start_atlas.sh
[2026-05-28 20:58:59] drwxrwx--x. 2 boinc boinc      4096 May 28 18:33 shared
[2026-05-28 20:58:59] -rw-r--r--. 2 boinc boinc    722756 May 28 18:33 input.tar.gz
[2026-05-28 20:58:59] -rw-r--r--. 1 boinc boinc         0 May 28 18:33 boinc_lockfile
[2026-05-28 20:58:59] -rw-r--r--. 1 boinc boinc      2604 May 28 18:33 pandaJob.out
[2026-05-28 20:58:59] -rw-------. 1 boinc boinc    996121 May 28 18:33 agis_schedconf.cvmfs.json
[2026-05-28 20:58:59] -rw-------. 1 boinc boinc         0 May 28 18:33 agis_ddmendpoints.agis.ALL.json
[2026-05-28 20:58:59] -rw-------. 1 boinc boinc   1251485 May 28 18:33 cric_ddmendpoints.json
[2026-05-28 20:58:59] -rw-------. 1 boinc boinc       442 May 28 18:33 workernode_map.json
[2026-05-28 20:58:59] drwx------. 5 boinc boinc      4096 May 28 18:33 pilot3
[2026-05-28 20:58:59] -rw-------. 1 boinc boinc 180774135 May 28 20:57 HITS.49545130._018845.pool.root.1
[2026-05-28 20:58:59] -rw-r--r--. 1 boinc boinc       488 May 28 20:58 boinc_task_state.xml
[2026-05-28 20:58:59] -rw-------. 1 boinc boinc      1026 May 28 20:58 memory_monitor_summary.json
[2026-05-28 20:58:59] -rw-------. 1 boinc boinc    289395 May 28 20:58 log.49545130._018845.job.log.tgz.1
[2026-05-28 20:58:59] -rw-------. 1 boinc boinc        95 May 28 20:58 pilot_heartbeat.json
[2026-05-28 20:58:59] -rw-------. 1 boinc boinc      6414 May 28 20:58 heartbeat_new.json
[2026-05-28 20:58:59] -rw-------. 1 boinc boinc      6305 May 28 20:58 heartbeat.json
[2026-05-28 20:58:59] -rw-r--r--. 1 boinc boinc      8192 May 28 20:58 boinc_mmap_file
[2026-05-28 20:58:59] -rw-r--r--. 1 boinc boinc        27 May 28 20:58 wrapper_checkpoint.txt
[2026-05-28 20:58:59] -rw-------. 1 boinc boinc      5092 May 28 20:58 pilotlog.txt
[2026-05-28 20:58:59] -rw-------. 1 boinc boinc    819394 May 28 20:58 log.49545130._018845.job.log.1
[2026-05-28 20:58:59] -rw-------. 1 boinc boinc       357 May 28 20:58 output.list
[2026-05-28 20:58:59] -rw-r--r--. 1 boinc boinc       410 May 28 20:58 runtime_log
[2026-05-28 20:58:59] -rw-------. 1 boinc boinc   1126400 May 28 20:58 result.tar.gz
[2026-05-28 20:58:59] -rw-r--r--. 1 boinc boinc      8844 May 28 20:58 runtime_log.err
[2026-05-28 20:58:59] -rw-------. 1 boinc boinc       662 May 28 20:58 53eb6395790f.diag
[2026-05-28 20:58:59] -rw-r--r--. 1 boinc boinc     20796 May 28 20:58 stderr.txt
[2026-05-28 20:58:59] HITS file was successfully produced:
[2026-05-28 20:58:59] -rw-------. 1 boinc boinc 180774135 May 28 20:57 shared/HITS.pool.root.1
[2026-05-28 20:58:59]  *** Contents of shared directory: ***
[2026-05-28 20:58:59] total 450596
[2026-05-28 20:58:59] -rw-r--r--. 2 boinc boinc 278755235 May 28 18:33 ATLAS.root_0
[2026-05-28 20:58:59] -rw-r--r--. 2 boinc boinc     15667 May 28 18:33 start_atlas.sh
[2026-05-28 20:58:59] -rw-r--r--. 2 boinc boinc    722756 May 28 18:33 input.tar.gz
[2026-05-28 20:58:59] -rw-------. 1 boinc boinc 180774135 May 28 20:57 HITS.pool.root.1
[2026-05-28 20:58:59] -rw-------. 1 boinc boinc   1126400 May 28 20:58 result.tar.gz
20:59:01 (124900): run_atlas exited; CPU time 33228.591914
20:59:01 (124900): called boinc_finish(0)

</stderr_txt>
]]>

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