Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:38:32 (3159728): wrapper (7.7.26015): starting
16:38:32 (3159728): wrapper: running run_atlas (--nthreads 4)
[2026-05-28 16:38:32] Arguments: --nthreads 4
[2026-05-28 16:38:32] Threads: 4
[2026-05-28 16:38:32] Checking for CVMFS
[2026-05-28 16:38:32] No cvmfs_config command found, will try listing directly
[2026-05-28 16:38:32] CVMFS is ok
[2026-05-28 16:38:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-28 16:38:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-28 16:38:32] Further information can be found at the LHC@home message board.
[2026-05-28 16:38:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-28 16:38:32] Checking for apptainer binary...
[2026-05-28 16:38:32] which: no apptainer in ((null))
[2026-05-28 16:38:32] apptainer is not installed, using version from CVMFS
[2026-05-28 16:38:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-28 16:38:32] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot60/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2026-05-28 16:38:32] apptainer works
[2026-05-28 16:38:32] Set ATHENA_PROC_NUMBER=4
[2026-05-28 16:38:32] Set ATHENA_CORE_NUMBER=4
[2026-05-28 16:38:32] Starting ATLAS job with PandaID=7155881973
[2026-05-28 16:38:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot60/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-28 18:49:14]  *** The last 200 lines of the pilot log: ***
[2026-05-28 18:49:14] 2026-05-28 16:48:11,793 | INFO     | PID=3164050 has CPU usage=14.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-05-28 18:49:14] 2026-05-28 16:48:11,794 | INFO     | .. there are 19 such processes running
[2026-05-28 18:49:14] 2026-05-28 16:48:11,803 | INFO     | job 7155881973 has state=finished
[2026-05-28 18:49:14] 2026-05-28 16:48:11,804 | INFO     | preparing for final server update for job 7155881973 in state='finished'
[2026-05-28 18:49:14] 2026-05-28 16:48:11,804 | INFO     | reading metadata from: /var/lib/boinc/var/slot60/slots/2/PanDA_Pilot-7155881973/jobReport.json
[2026-05-28 18:49:14] 2026-05-28 16:48:11,807 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot60/slots/2/workernode_map.json
[2026-05-28 18:49:14] 2026-05-28 16:48:11,808 | INFO     | this job has now completed (state=finished)
[2026-05-28 18:49:14] 2026-05-28 16:48:11,808 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-28 18:49:14] 2026-05-28 16:48:11,808 | INFO     | log transfer has been attempted: DONE
[2026-05-28 18:49:14] 2026-05-28 16:48:11,808 | INFO     | job 7155881973 has finished - writing final server update
[2026-05-28 18:49:14] 2026-05-28 16:48:11,808 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2069553/.job.ad'
[2026-05-28 18:49:14] 2026-05-28 16:48:11,809 | INFO     | total number of processed events: 400 (read)
[2026-05-28 18:49:14] 2026-05-28 16:48:11,832 | INFO     | using path: /var/lib/boinc/var/slot60/slots/2/PanDA_Pilot-7155881973/memory_monitor_summary.json (trf name=prmon)
[2026-05-28 18:49:14] 2026-05-28 16:48:11,833 | INFO     | extracted standard info from prmon json
[2026-05-28 18:49:14] 2026-05-28 16:48:11,833 | INFO     | extracted standard memory fields from prmon json
[2026-05-28 18:49:14] 2026-05-28 16:48:11,833 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-28 18:49:14] 2026-05-28 16:48:11,834 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-28 18:49:14] 2026-05-28 16:48:11,836 | INFO     | fitting pss+swap vs Time
[2026-05-28 18:49:14] 2026-05-28 16:48:11,837 | INFO     | sum of square deviations: 635130048.0
[2026-05-28 18:49:14] 2026-05-28 16:48:11,837 | INFO     | sum of deviations: 12057625634.0
[2026-05-28 18:49:14] 2026-05-28 16:48:11,837 | INFO     | mean x (centered): 0.0
[2026-05-28 18:49:14] 2026-05-28 16:48:11,838 | INFO     | mean y: 2331314.6614173227
[2026-05-28 18:49:14] 2026-05-28 16:48:11,838 | INFO     | intersect: 2331314.6614173227
[2026-05-28 18:49:14] 2026-05-28 16:48:11,838 | INFO     | chi2: 1.3634557343595346
[2026-05-28 18:49:14] 2026-05-28 16:48:11,838 | INFO     | sum of square deviations: 563026370.5
[2026-05-28 18:49:14] 2026-05-28 16:48:11,839 | INFO     | sum of deviations: 11724068240.0
[2026-05-28 18:49:14] 2026-05-28 16:48:11,839 | INFO     | mean x (centered): 0.0
[2026-05-28 18:49:14] 2026-05-28 16:48:11,839 | INFO     | mean y: 2330608.8524590163
[2026-05-28 18:49:14] 2026-05-28 16:48:11,839 | INFO     | intersect: 2330608.8524590163
[2026-05-28 18:49:14] 2026-05-28 16:48:11,839 | INFO     | chi2: 1.365246605212753
[2026-05-28 18:49:14] 2026-05-28 16:48:11,839 | INFO     | current chi2=1.365246605212753 (change=-0.13134792777556675 %)
[2026-05-28 18:49:14] 2026-05-28 16:48:11,840 | INFO     | right removable region: 121
[2026-05-28 18:49:14] 2026-05-28 16:48:11,840 | INFO     | sum of square deviations: 563026370.5
[2026-05-28 18:49:14] 2026-05-28 16:48:11,840 | INFO     | sum of deviations: -4449668332.499996
[2026-05-28 18:49:14] 2026-05-28 16:48:11,840 | INFO     | mean x (centered): 0.0
[2026-05-28 18:49:14] 2026-05-28 16:48:11,841 | INFO     | mean y: 2365543.0901639345
[2026-05-28 18:49:14] 2026-05-28 16:48:11,841 | INFO     | intersect: 2365543.0901639345
[2026-05-28 18:49:14] 2026-05-28 16:48:11,841 | INFO     | chi2: 0.0034141785939533773
[2026-05-28 18:49:14] 2026-05-28 16:48:11,841 | INFO     | current chi2=0.0034141785939533773 (change=99.74959373392807 %)
[2026-05-28 18:49:14] 2026-05-28 16:48:11,841 | INFO     | sum of square deviations: 496597218.0
[2026-05-28 18:49:14] 2026-05-28 16:48:11,842 | INFO     | sum of deviations: -4355616184.0
[2026-05-28 18:49:14] 2026-05-28 16:48:11,842 | INFO     | mean x (centered): 0.0
[2026-05-28 18:49:14] 2026-05-28 16:48:11,842 | INFO     | mean y: 2365311.5555555555
[2026-05-28 18:49:14] 2026-05-28 16:48:11,842 | INFO     | intersect: 2365311.5555555555
[2026-05-28 18:49:14] 2026-05-28 16:48:11,842 | INFO     | chi2: 0.0026000049978205757
[2026-05-28 18:49:14] 2026-05-28 16:48:11,842 | INFO     | current chi2=0.0026000049978205757 (change=23.84683676403835 %)
[2026-05-28 18:49:14] 2026-05-28 16:48:11,843 | INFO     | left removable region: 10
[2026-05-28 18:49:14] 2026-05-28 16:48:11,843 | INFO     | sum of square deviations: 424045160.0
[2026-05-28 18:49:14] 2026-05-28 16:48:11,843 | INFO     | sum of deviations: -3996385597.9999995
[2026-05-28 18:49:14] 2026-05-28 16:48:11,843 | INFO     | mean x (centered): 0.0
[2026-05-28 18:49:14] 2026-05-28 16:48:11,844 | INFO     | mean y: 2366218.5135135134
[2026-05-28 18:49:14] 2026-05-28 16:48:11,844 | INFO     | intersect: 2366218.5135135134
[2026-05-28 18:49:14] 2026-05-28 16:48:11,844 | INFO     | chi2: 0.0023754790396626558
[2026-05-28 18:49:14] 2026-05-28 16:48:11,844 | INFO     | current memory leak: -9.42 B/s (using 111 data points, chi2=0.00)
[2026-05-28 18:49:14] 2026-05-28 16:48:11,844 | INFO     | could have reported an average CPU frequency of 2722 MHz (8 samples)
[2026-05-28 18:49:14] 2026-05-28 16:48:11,845 | INFO     | ..............................
[2026-05-28 18:49:14] 2026-05-28 16:48:11,845 | INFO     | . Timing measurements:
[2026-05-28 18:49:14] 2026-05-28 16:48:11,845 | INFO     | . get job = 0 s
[2026-05-28 18:49:14] 2026-05-28 16:48:11,845 | INFO     | . initial setup = 8 s
[2026-05-28 18:49:14] 2026-05-28 16:48:11,845 | INFO     | . payload setup = 14 s
[2026-05-28 18:49:14] 2026-05-28 16:48:11,845 | INFO     | . stage-in = 0 s
[2026-05-28 18:49:14] 2026-05-28 16:48:11,845 | INFO     | . payload execution = 7721 s
[2026-05-28 18:49:14] 2026-05-28 16:48:11,845 | INFO     | . stage-out = 0 s
[2026-05-28 18:49:14] 2026-05-28 16:48:11,845 | INFO     | . log creation = 0 s
[2026-05-28 18:49:14] 2026-05-28 16:48:11,846 | INFO     | ..............................
[2026-05-28 18:49:14] 2026-05-28 16:48:12,102 | INFO     | 
[2026-05-28 18:49:14] 2026-05-28 16:48:12,102 | INFO     | job summary report
[2026-05-28 18:49:14] 2026-05-28 16:48:12,102 | INFO     | --------------------------------------------------
[2026-05-28 18:49:14] 2026-05-28 16:48:12,102 | INFO     | PanDA job id: 7155881973
[2026-05-28 18:49:14] 2026-05-28 16:48:12,102 | INFO     | task id: 49545102
[2026-05-28 18:49:14] 2026-05-28 16:48:12,102 | INFO     | errors: (none)
[2026-05-28 18:49:14] 2026-05-28 16:48:12,103 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-28 18:49:14] 2026-05-28 16:48:12,103 | INFO     | pilot state: finished 
[2026-05-28 18:49:14] 2026-05-28 16:48:12,103 | INFO     | transexitcode: 0
[2026-05-28 18:49:14] 2026-05-28 16:48:12,103 | INFO     | exeerrorcode: 0
[2026-05-28 18:49:14] 2026-05-28 16:48:12,103 | INFO     | exeerrordiag: 
[2026-05-28 18:49:14] 2026-05-28 16:48:12,103 | INFO     | exitcode: 0
[2026-05-28 18:49:14] 2026-05-28 16:48:12,103 | INFO     | exitmsg: OK
[2026-05-28 18:49:14] 2026-05-28 16:48:12,103 | INFO     | cpuconsumptiontime: 29284 s
[2026-05-28 18:49:14] 2026-05-28 16:48:12,103 | INFO     | nevents: 400
[2026-05-28 18:49:14] 2026-05-28 16:48:12,103 | INFO     | neventsw: 0
[2026-05-28 18:49:14] 2026-05-28 16:48:12,103 | INFO     | pid: 3169338
[2026-05-28 18:49:14] 2026-05-28 16:48:12,104 | INFO     | pgrp: 3169338
[2026-05-28 18:49:14] 2026-05-28 16:48:12,104 | INFO     | corecount: 4
[2026-05-28 18:49:14] 2026-05-28 16:48:12,104 | INFO     | event service: False
[2026-05-28 18:49:14] 2026-05-28 16:48:12,104 | INFO     | sizes: {0: 2266021, 1: 2267651, 11: 2267679, 7739: 2295530, 7740: 2295529, 7741: 2304605, 7744: 2304789, 7745: 2304983}
[2026-05-28 18:49:14] 2026-05-28 16:48:12,104 | INFO     | --------------------------------------------------
[2026-05-28 18:49:14] 2026-05-28 16:48:12,104 | INFO     | 
[2026-05-28 18:49:14] 2026-05-28 16:48:12,104 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot60/slots/2
[2026-05-28 18:49:14] 2026-05-28 16:48:12,132 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-28 18:49:14] 2026-05-28 16:48:12,132 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-28 18:49:14] 2026-05-28 16:48:12,132 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-28 18:49:14] 2026-05-28 16:48:12,132 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-28 18:49:14] 2026-05-28 16:48:12,133 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-28 18:49:14] 2026-05-28 16:48:12,133 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-28 18:49:14] 2026-05-28 16:48:12,133 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-28 18:49:14] 2026-05-28 16:48:12,133 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-28 18:49:14] 2026-05-28 16:48:12,133 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-28 18:49:14] 2026-05-28 16:48:12,133 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-28 18:49:14] 2026-05-28 16:48:12,133 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-28 18:49:14] 2026-05-28 16:48:12,133 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-28 18:49:14] 2026-05-28 16:48:12,133 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-28 18:49:14] 2026-05-28 16:48:12,133 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-28 18:49:14] 2026-05-28 16:48:12,133 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-28 18:49:14] 2026-05-28 16:48:12,133 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-28 18:49:14] 2026-05-28 16:48:12,133 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-28 18:49:14] 2026-05-28 16:48:12,134 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-28 18:49:14] 2026-05-28 16:48:12,134 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-28 18:49:14] 2026-05-28 16:48:12,134 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-28 18:49:14] 2026-05-28 16:48:12,134 | INFO     | job 7155881973 has completed (purged errors)
[2026-05-28 18:49:14] 2026-05-28 16:48:12,134 | INFO     | overall cleanup function is called
[2026-05-28 18:49:14] 2026-05-28 16:48:13,143 | INFO     | --- collectZombieJob: --- 10, [3169338]
[2026-05-28 18:49:14] 2026-05-28 16:48:13,143 | INFO     | zombie collector waiting for pid 3169338
[2026-05-28 18:49:14] 2026-05-28 16:48:13,143 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-28 18:49:14] 2026-05-28 16:48:13,143 | INFO     | collected zombie processes
[2026-05-28 18:49:14] 2026-05-28 16:48:13,143 | INFO     | will attempt to kill all subprocesses of pid=3169338
[2026-05-28 18:49:14] 2026-05-28 16:48:13,785 | INFO     | process IDs to be killed: [3169338] (in reverse order)
[2026-05-28 18:49:14] 2026-05-28 16:48:14,102 | WARNING  | found no corresponding commands to process id(s)
[2026-05-28 18:49:14] 2026-05-28 16:48:14,103 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-28 18:49:14] 2026-05-28 16:48:14,132 | INFO     | did not find any defunct processes belonging to 3169338
[2026-05-28 18:49:14] 2026-05-28 16:48:14,158 | INFO     | did not find any defunct processes belonging to 3169338
[2026-05-28 18:49:14] 2026-05-28 16:48:14,159 | INFO     | Ready for new job
[2026-05-28 18:49:14] 2026-05-28 16:48:14,160 | INFO     | ***************************************
[2026-05-28 18:49:14] 2026-05-28 16:48:14,161 | INFO     | ***  PanDA Pilot version 3.13.1.30  ***
[2026-05-28 18:49:14] 2026-05-28 16:48:14,161 | INFO     | ***************************************
[2026-05-28 18:49:14] 2026-05-28 16:48:14,161 | INFO     | 
[2026-05-28 18:49:14] 2026-05-28 16:48:14,169 | INFO     | architecture information:
[2026-05-28 18:49:14] 2026-05-28 16:48:14,170 | INFO     | executing command: cat /etc/os-release
[2026-05-28 18:49:14] 2026-05-28 16:48:14,192 | INFO     | cat /etc/os-release:
[2026-05-28 18:49:14] NAME="CentOS Linux"
[2026-05-28 18:49:14] VERSION="7 (Core)"
[2026-05-28 18:49:14] ID="centos"
[2026-05-28 18:49:14] ID_LIKE="rhel fedora"
[2026-05-28 18:49:14] VERSION_ID="7"
[2026-05-28 18:49:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-28 18:49:14] ANSI_COLOR="0;31"
[2026-05-28 18:49:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-28 18:49:14] HOME_URL="https://www.centos.org/"
[2026-05-28 18:49:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-28 18:49:14] 
[2026-05-28 18:49:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-28 18:49:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-28 18:49:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-28 18:49:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-28 18:49:14] 
[2026-05-28 18:49:14] 2026-05-28 16:48:14,193 | INFO     | ***************************************
[2026-05-28 18:49:14] 2026-05-28 16:48:14,696 | INFO     | executing command: df -mP /var/lib/boinc/var/slot60/slots/2
[2026-05-28 18:49:14] 2026-05-28 16:48:14,723 | INFO     | sufficient remaining disk space (309773467648 B)
[2026-05-28 18:49:14] 2026-05-28 16:48:14,724 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-28 18:49:14] 2026-05-28 16:48:14,724 | INFO     | current server update state: UPDATING_FINAL
[2026-05-28 18:49:14] 2026-05-28 16:48:14,724 | INFO     | update_server=False
[2026-05-28 18:49:14] 2026-05-28 16:48:14,724 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-28 18:49:14] 2026-05-28 16:48:14,725 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-28 18:49:14] 2026-05-28 16:48:14,725 | INFO     | aborting loop
[2026-05-28 18:49:14] 2026-05-28 16:48:14,911 | INFO     | all payload control threads have been joined
[2026-05-28 18:49:14] 2026-05-28 16:48:15,447 | INFO     | all job control threads have been joined
[2026-05-28 18:49:14] 2026-05-28 16:48:15,618 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-28 18:49:14] 2026-05-28 16:48:15,640 | INFO     | all data control threads have been joined
[2026-05-28 18:49:14] 2026-05-28 16:48:15,729 | INFO     | [job] retrieve thread has finished
[2026-05-28 18:49:14] 2026-05-28 16:48:15,731 | INFO     | [job] job monitor thread has finished
[2026-05-28 18:49:14] 2026-05-28 16:48:15,767 | INFO     | [payload] validate_post thread has finished
[2026-05-28 18:49:14] 2026-05-28 16:48:15,916 | INFO     | [payload] control thread has finished
[2026-05-28 18:49:14] 2026-05-28 16:48:16,343 | INFO     | [payload] execute_payloads thread has finished
[2026-05-28 18:49:14] 2026-05-28 16:48:16,452 | INFO     | [job] control thread has finished
[2026-05-28 18:49:14] 2026-05-28 16:48:16,535 | INFO     | [payload] failed_post thread has finished
[2026-05-28 18:49:14] 2026-05-28 16:48:16,610 | INFO     | [job] create_data_payload thread has finished
[2026-05-28 18:49:14] 2026-05-28 16:48:16,612 | INFO     | [job] validate thread has finished
[2026-05-28 18:49:14] 2026-05-28 16:48:16,645 | INFO     | [data] control thread has finished
[2026-05-28 18:49:14] 2026-05-28 16:48:16,815 | INFO     | [payload] validate_pre thread has finished
[2026-05-28 18:49:14] 2026-05-28 16:48:16,948 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-28 18:49:14] 2026-05-28 16:48:17,032 | INFO     | [data] copytool_in thread has finished
[2026-05-28 18:49:14] 2026-05-28 16:48:17,094 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-28 18:49:14] 2026-05-28 16:48:17,619 | INFO     | [data] copytool_out thread has finished
[2026-05-28 18:49:14] 2026-05-28 16:48:17,953 | INFO     | [job] queue monitor thread has finished
[2026-05-28 18:49:14] 2026-05-28 16:48:21,103 | INFO     | [data] queue_monitor thread has finished
[2026-05-28 18:49:14] 2026-05-28 16:48:25,318 | INFO     | job.realtimelogging is not enabled
[2026-05-28 18:49:14] 2026-05-28 16:48:26,323 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-28 18:49:14] 2026-05-28 16:48:44,762 | INFO     | PID=3164050 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-28 18:49:14] 2026-05-28 16:48:44,762 | INFO     | .. there are 19 such processes running
[2026-05-28 18:49:14] 2026-05-28 16:48:44,763 | INFO     | found 0 job(s) in 20 queues
[2026-05-28 18:49:14] 2026-05-28 16:48:44,763 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-28 18:49:14] 2026-05-28 16:48:44,763 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-28 18:49:14] 2026-05-28 16:49:07,676 | INFO     | [monitor] cgroup control has ended
[2026-05-28 18:49:14] 2026-05-28 16:49:09,075 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22749489522496)>', '<ExcThread(monitor, started 22749245601536)>']
[2026-05-28 18:49:14] 2026-05-28 16:49:09,890 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-28 18:49:14] 2026-05-28 16:49:09,890 | INFO     | [monitor] control thread has ended
[2026-05-28 18:49:14] 2026-05-28 16:49:14,101 | INFO     | all workflow threads have been joined
[2026-05-28 18:49:14] 2026-05-28 16:49:14,101 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-28 18:49:14] 2026-05-28 16:49:14,101 | INFO     | traces error code: 0
[2026-05-28 18:49:14] 2026-05-28 16:49:14,102 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-28 18:49:14] 2026-05-28 16:49:14,245 [wrapper] ==== pilot stdout END ====
[2026-05-28 18:49:14] 2026-05-28 16:49:14,253 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-28 18:49:14] 2026-05-28 16:49:14,258 [wrapper] pilotpid: 3164050
[2026-05-28 18:49:14] 2026-05-28 16:49:14,261 [wrapper] Pilot exit status: 0
[2026-05-28 18:49:14] 2026-05-28 16:49:14,275 [wrapper] pandaids: 7155881973
[2026-05-28 18:49:14] 2026-05-28 16:49:14,469 [wrapper] cleanup supervisor_pilot 3524440 3164051
[2026-05-28 18:49:14] 2026-05-28 16:49:14,473 [wrapper] Test setup, not cleaning
[2026-05-28 18:49:14] 2026-05-28 16:49:14,477 [wrapper] apfmon messages muted
[2026-05-28 18:49:14] 2026-05-28 16:49:14,483 [wrapper] ==== wrapper stdout END ====
[2026-05-28 18:49:14] 2026-05-28 16:49:14,486 [wrapper] ==== wrapper stderr END ====
[2026-05-28 18:49:14]  *** Error codes and diagnostics ***
[2026-05-28 18:49:14]     "exeErrorCode": 0,
[2026-05-28 18:49:14]     "pilotErrorCode": 0,
[2026-05-28 18:49:14]  *** Listing of results directory ***
[2026-05-28 18:49:14] total 424544
[2026-05-28 18:49:14] -rw-r--r--. 1 boinc boinc    709501 May 28 11:03 pilot3.tar.gz
[2026-05-28 18:49:14] -rw-r--r--. 1 boinc boinc      5631 May 28 11:04 queuedata.json
[2026-05-28 18:49:14] -rwx------. 1 boinc boinc     36281 May 28 11:05 runpilot2-wrapper.sh
[2026-05-28 18:49:14] -rw-r--r--. 1 boinc boinc       100 May 28 16:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-28 18:49:14] -rwxr-xr-x. 1 boinc boinc      7986 May 28 16:38 run_atlas
[2026-05-28 18:49:14] -rw-r--r--. 1 boinc boinc       105 May 28 16:38 job.xml
[2026-05-28 18:49:14] -rw-r--r--. 1 boinc boinc      6540 May 28 16:38 init_data.xml
[2026-05-28 18:49:14] -rw-r--r--. 2 boinc boinc 264233428 May 28 16:38 EVNT.49539563._000404.pool.root.1
[2026-05-28 18:49:14] -rw-r--r--. 2 boinc boinc     15667 May 28 16:38 start_atlas.sh
[2026-05-28 18:49:14] drwxrwx--x. 2 boinc boinc      4096 May 28 16:38 shared
[2026-05-28 18:49:14] -rw-r--r--. 2 boinc boinc    722753 May 28 16:38 input.tar.gz
[2026-05-28 18:49:14] -rw-r--r--. 1 boinc boinc         0 May 28 16:38 boinc_lockfile
[2026-05-28 18:49:14] -rw-r--r--. 1 boinc boinc      2569 May 28 16:38 pandaJob.out
[2026-05-28 18:49:14] -rw-------. 1 boinc boinc    996105 May 28 16:38 agis_schedconf.cvmfs.json
[2026-05-28 18:49:14] -rw-------. 1 boinc boinc         0 May 28 16:38 agis_ddmendpoints.agis.ALL.json
[2026-05-28 18:49:14] -rw-------. 1 boinc boinc   1251485 May 28 16:38 cric_ddmendpoints.json
[2026-05-28 18:49:14] -rw-------. 1 boinc boinc       443 May 28 16:38 workernode_map.json
[2026-05-28 18:49:14] drwx------. 5 boinc boinc      4096 May 28 16:38 pilot3
[2026-05-28 18:49:14] -rw-------. 1 boinc boinc 164517738 May 28 18:47 HITS.49545102._011985.pool.root.1
[2026-05-28 18:49:14] -rw-r--r--. 1 boinc boinc       487 May 28 18:47 boinc_task_state.xml
[2026-05-28 18:49:14] -rw-------. 1 boinc boinc      1025 May 28 18:48 memory_monitor_summary.json
[2026-05-28 18:49:14] -rw-------. 1 boinc boinc    284785 May 28 18:48 log.49545102._011985.job.log.tgz.1
[2026-05-28 18:49:14] -rw-------. 1 boinc boinc        95 May 28 18:48 pilot_heartbeat.json
[2026-05-28 18:49:14] -rw-------. 1 boinc boinc      6415 May 28 18:48 heartbeat_new.json
[2026-05-28 18:49:14] -rw-------. 1 boinc boinc      6306 May 28 18:48 heartbeat.json
[2026-05-28 18:49:14] -rw-r--r--. 1 boinc boinc        27 May 28 18:48 wrapper_checkpoint.txt
[2026-05-28 18:49:14] -rw-r--r--. 1 boinc boinc      8192 May 28 18:48 boinc_mmap_file
[2026-05-28 18:49:14] -rw-------. 1 boinc boinc      4905 May 28 18:49 pilotlog.txt
[2026-05-28 18:49:14] -rw-------. 1 boinc boinc    741165 May 28 18:49 log.49545102._011985.job.log.1
[2026-05-28 18:49:14] -rw-------. 1 boinc boinc       357 May 28 18:49 output.list
[2026-05-28 18:49:14] -rw-r--r--. 1 boinc boinc       410 May 28 18:49 runtime_log
[2026-05-28 18:49:14] -rw-------. 1 boinc boinc   1044480 May 28 18:49 result.tar.gz
[2026-05-28 18:49:14] -rw-r--r--. 1 boinc boinc      8827 May 28 18:49 runtime_log.err
[2026-05-28 18:49:14] -rw-------. 1 boinc boinc       662 May 28 18:49 0540d1ee2192.diag
[2026-05-28 18:49:14] -rw-r--r--. 1 boinc boinc     21142 May 28 18:49 stderr.txt
[2026-05-28 18:49:14] HITS file was successfully produced:
[2026-05-28 18:49:14] -rw-------. 1 boinc boinc 164517738 May 28 18:47 shared/HITS.pool.root.1
[2026-05-28 18:49:14]  *** Contents of shared directory: ***
[2026-05-28 18:49:14] total 420460
[2026-05-28 18:49:14] -rw-r--r--. 2 boinc boinc 264233428 May 28 16:38 ATLAS.root_0
[2026-05-28 18:49:14] -rw-r--r--. 2 boinc boinc     15667 May 28 16:38 start_atlas.sh
[2026-05-28 18:49:14] -rw-r--r--. 2 boinc boinc    722753 May 28 16:38 input.tar.gz
[2026-05-28 18:49:14] -rw-------. 1 boinc boinc 164517738 May 28 18:47 HITS.pool.root.1
[2026-05-28 18:49:14] -rw-------. 1 boinc boinc   1044480 May 28 18:49 result.tar.gz
18:49:16 (3159728): run_atlas exited; CPU time 29698.972497
18:49:16 (3159728): called boinc_finish(0)

</stderr_txt>
]]>

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