Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:19:30 (3251914): wrapper (7.7.26015): starting
18:19:30 (3251914): wrapper: running run_atlas (--nthreads 4)
[2026-05-28 18:19:30] Arguments: --nthreads 4
[2026-05-28 18:19:30] Threads: 4
[2026-05-28 18:19:30] Checking for CVMFS
[2026-05-28 18:19:30] No cvmfs_config command found, will try listing directly
[2026-05-28 18:19:30] CVMFS is ok
[2026-05-28 18:19:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-28 18:19:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-28 18:19:30] Further information can be found at the LHC@home message board.
[2026-05-28 18:19:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-28 18:19:30] Checking for apptainer binary...
[2026-05-28 18:19:30] which: no apptainer in ((null))
[2026-05-28 18:19:30] apptainer is not installed, using version from CVMFS
[2026-05-28 18:19:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-28 18:19:30] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot100/slots/3/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2026-05-28 18:19:30] apptainer works
[2026-05-28 18:19:30] Set ATHENA_PROC_NUMBER=4
[2026-05-28 18:19:30] Set ATHENA_CORE_NUMBER=4
[2026-05-28 18:19:30] Starting ATLAS job with PandaID=7157054080
[2026-05-28 18:19:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot100/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-28 20:37:12]  *** The last 200 lines of the pilot log: ***
[2026-05-28 20:37:12] 2026-05-28 18:36:28,265 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-28 20:37:12] 2026-05-28 18:36:28,419 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-28 20:37:12] 2026-05-28 18:36:28,504 | INFO     | job 7157054080 has state=finished
[2026-05-28 20:37:12] 2026-05-28 18:36:28,505 | INFO     | preparing for final server update for job 7157054080 in state='finished'
[2026-05-28 20:37:12] 2026-05-28 18:36:28,505 | INFO     | reading metadata from: /var/lib/boinc/var/slot100/slots/3/PanDA_Pilot-7157054080/jobReport.json
[2026-05-28 20:37:12] 2026-05-28 18:36:28,508 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot100/slots/3/workernode_map.json
[2026-05-28 20:37:12] 2026-05-28 18:36:28,508 | INFO     | this job has now completed (state=finished)
[2026-05-28 20:37:12] 2026-05-28 18:36:28,508 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-28 20:37:12] 2026-05-28 18:36:28,508 | INFO     | log transfer has been attempted: DONE
[2026-05-28 20:37:12] 2026-05-28 18:36:28,508 | INFO     | job 7157054080 has finished - writing final server update
[2026-05-28 20:37:12] 2026-05-28 18:36:28,509 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1918286/.job.ad'
[2026-05-28 20:37:12] 2026-05-28 18:36:28,509 | INFO     | total number of processed events: 400 (read)
[2026-05-28 20:37:12] 2026-05-28 18:36:28,533 | INFO     | using path: /var/lib/boinc/var/slot100/slots/3/PanDA_Pilot-7157054080/memory_monitor_summary.json (trf name=prmon)
[2026-05-28 20:37:12] 2026-05-28 18:36:28,534 | INFO     | extracted standard info from prmon json
[2026-05-28 20:37:12] 2026-05-28 18:36:28,534 | INFO     | extracted standard memory fields from prmon json
[2026-05-28 20:37:12] 2026-05-28 18:36:28,534 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-28 20:37:12] 2026-05-28 18:36:28,535 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-28 20:37:12] 2026-05-28 18:36:28,537 | INFO     | fitting pss+swap vs Time
[2026-05-28 20:37:12] 2026-05-28 18:36:28,538 | INFO     | sum of square deviations: 746051197.5
[2026-05-28 20:37:12] 2026-05-28 18:36:28,538 | INFO     | sum of deviations: 3308926486.4999976
[2026-05-28 20:37:12] 2026-05-28 18:36:28,538 | INFO     | mean x (centered): 0.0
[2026-05-28 20:37:12] 2026-05-28 18:36:28,538 | INFO     | mean y: 2354736.73880597
[2026-05-28 20:37:12] 2026-05-28 18:36:28,539 | INFO     | intersect: 2354736.73880597
[2026-05-28 20:37:12] 2026-05-28 18:36:28,539 | INFO     | chi2: 1.2611821762483537
[2026-05-28 20:37:12] 2026-05-28 18:36:28,539 | INFO     | sum of square deviations: 665612480.0
[2026-05-28 20:37:12] 2026-05-28 18:36:28,540 | INFO     | sum of deviations: 3426991224.000006
[2026-05-28 20:37:12] 2026-05-28 18:36:28,540 | INFO     | mean x (centered): 0.0
[2026-05-28 20:37:12] 2026-05-28 18:36:28,540 | INFO     | mean y: 2354960.7054263568
[2026-05-28 20:37:12] 2026-05-28 18:36:28,540 | INFO     | intersect: 2354960.7054263568
[2026-05-28 20:37:12] 2026-05-28 18:36:28,540 | INFO     | chi2: 1.2625350148945336
[2026-05-28 20:37:12] 2026-05-28 18:36:28,540 | INFO     | current chi2=1.2625350148945336 (change=-0.10726750438260649 %)
[2026-05-28 20:37:12] 2026-05-28 18:36:28,540 | INFO     | right removable region: 128
[2026-05-28 20:37:12] 2026-05-28 18:36:28,541 | INFO     | sum of square deviations: 665612480.0
[2026-05-28 20:37:12] 2026-05-28 18:36:28,541 | INFO     | sum of deviations: -11400055272.000002
[2026-05-28 20:37:12] 2026-05-28 18:36:28,542 | INFO     | mean x (centered): 0.0
[2026-05-28 20:37:12] 2026-05-28 18:36:28,542 | INFO     | mean y: 2381958.6511627906
[2026-05-28 20:37:12] 2026-05-28 18:36:28,542 | INFO     | intersect: 2381958.6511627906
[2026-05-28 20:37:12] 2026-05-28 18:36:28,542 | INFO     | chi2: 0.015112187402610519
[2026-05-28 20:37:12] 2026-05-28 18:36:28,542 | INFO     | current chi2=0.015112187402610519 (change=98.8017442929962 %)
[2026-05-28 20:37:12] 2026-05-28 18:36:28,542 | INFO     | sum of square deviations: 591173875.0
[2026-05-28 20:37:12] 2026-05-28 18:36:28,543 | INFO     | sum of deviations: -10236450931.0
[2026-05-28 20:37:12] 2026-05-28 18:36:28,543 | INFO     | mean x (centered): 0.0
[2026-05-28 20:37:12] 2026-05-28 18:36:28,543 | INFO     | mean y: 2379567.5967741935
[2026-05-28 20:37:12] 2026-05-28 18:36:28,543 | INFO     | intersect: 2379567.5967741935
[2026-05-28 20:37:12] 2026-05-28 18:36:28,543 | INFO     | chi2: 0.015014638887276534
[2026-05-28 20:37:12] 2026-05-28 18:36:28,544 | INFO     | current chi2=0.015014638887276534 (change=0.6454956700519354 %)
[2026-05-28 20:37:12] 2026-05-28 18:36:28,544 | INFO     | left removable region: 10
[2026-05-28 20:37:12] 2026-05-28 18:36:28,544 | INFO     | sum of square deviations: 509440249.5
[2026-05-28 20:37:12] 2026-05-28 18:36:28,544 | INFO     | sum of deviations: -9541242409.999998
[2026-05-28 20:37:12] 2026-05-28 18:36:28,545 | INFO     | mean x (centered): 0.0
[2026-05-28 20:37:12] 2026-05-28 18:36:28,545 | INFO     | mean y: 2381125.4915254237
[2026-05-28 20:37:12] 2026-05-28 18:36:28,545 | INFO     | intersect: 2381125.4915254237
[2026-05-28 20:37:12] 2026-05-28 18:36:28,545 | INFO     | chi2: 0.01373329818445055
[2026-05-28 20:37:12] 2026-05-28 18:36:28,545 | INFO     | current memory leak: -18.73 B/s (using 118 data points, chi2=0.01)
[2026-05-28 20:37:12] 2026-05-28 18:36:28,545 | INFO     | could have reported an average CPU frequency of 2726 MHz (8 samples)
[2026-05-28 20:37:12] 2026-05-28 18:36:28,546 | INFO     | ..............................
[2026-05-28 20:37:12] 2026-05-28 18:36:28,546 | INFO     | . Timing measurements:
[2026-05-28 20:37:12] 2026-05-28 18:36:28,546 | INFO     | . get job = 0 s
[2026-05-28 20:37:12] 2026-05-28 18:36:28,546 | INFO     | . initial setup = 7 s
[2026-05-28 20:37:12] 2026-05-28 18:36:28,546 | INFO     | . payload setup = 14 s
[2026-05-28 20:37:12] 2026-05-28 18:36:28,546 | INFO     | . stage-in = 0 s
[2026-05-28 20:37:12] 2026-05-28 18:36:28,546 | INFO     | . payload execution = 8161 s
[2026-05-28 20:37:12] 2026-05-28 18:36:28,547 | INFO     | . stage-out = 0 s
[2026-05-28 20:37:12] 2026-05-28 18:36:28,547 | INFO     | . log creation = 0 s
[2026-05-28 20:37:12] 2026-05-28 18:36:28,547 | INFO     | ..............................
[2026-05-28 20:37:12] 2026-05-28 18:36:28,642 | INFO     | 
[2026-05-28 20:37:12] 2026-05-28 18:36:28,642 | INFO     | job summary report
[2026-05-28 20:37:12] 2026-05-28 18:36:28,642 | INFO     | --------------------------------------------------
[2026-05-28 20:37:12] 2026-05-28 18:36:28,642 | INFO     | PanDA job id: 7157054080
[2026-05-28 20:37:12] 2026-05-28 18:36:28,642 | INFO     | task id: 49545130
[2026-05-28 20:37:12] 2026-05-28 18:36:28,643 | INFO     | errors: (none)
[2026-05-28 20:37:12] 2026-05-28 18:36:28,643 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-28 20:37:12] 2026-05-28 18:36:28,643 | INFO     | pilot state: finished 
[2026-05-28 20:37:12] 2026-05-28 18:36:28,643 | INFO     | transexitcode: 0
[2026-05-28 20:37:12] 2026-05-28 18:36:28,643 | INFO     | exeerrorcode: 0
[2026-05-28 20:37:12] 2026-05-28 18:36:28,643 | INFO     | exeerrordiag: 
[2026-05-28 20:37:12] 2026-05-28 18:36:28,643 | INFO     | exitcode: 0
[2026-05-28 20:37:12] 2026-05-28 18:36:28,643 | INFO     | exitmsg: OK
[2026-05-28 20:37:12] 2026-05-28 18:36:28,643 | INFO     | cpuconsumptiontime: 31332 s
[2026-05-28 20:37:12] 2026-05-28 18:36:28,643 | INFO     | nevents: 400
[2026-05-28 20:37:12] 2026-05-28 18:36:28,643 | INFO     | neventsw: 0
[2026-05-28 20:37:12] 2026-05-28 18:36:28,643 | INFO     | pid: 3262130
[2026-05-28 20:37:12] 2026-05-28 18:36:28,644 | INFO     | pgrp: 3262130
[2026-05-28 20:37:12] 2026-05-28 18:36:28,644 | INFO     | corecount: 4
[2026-05-28 20:37:12] 2026-05-28 18:36:28,644 | INFO     | event service: False
[2026-05-28 20:37:12] 2026-05-28 18:36:28,644 | INFO     | sizes: {0: 2266071, 1: 2267701, 11: 2267729, 8180: 2295559, 8181: 2304581, 8183: 2304637, 8184: 2304959}
[2026-05-28 20:37:12] 2026-05-28 18:36:28,644 | INFO     | --------------------------------------------------
[2026-05-28 20:37:12] 2026-05-28 18:36:28,644 | INFO     | 
[2026-05-28 20:37:12] 2026-05-28 18:36:28,644 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot100/slots/3
[2026-05-28 20:37:12] 2026-05-28 18:36:28,674 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-28 20:37:12] 2026-05-28 18:36:28,674 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-28 20:37:12] 2026-05-28 18:36:28,675 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-28 20:37:12] 2026-05-28 18:36:28,675 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-28 20:37:12] 2026-05-28 18:36:28,675 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-28 20:37:12] 2026-05-28 18:36:28,675 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-28 20:37:12] 2026-05-28 18:36:28,675 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-28 20:37:12] 2026-05-28 18:36:28,675 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-28 20:37:12] 2026-05-28 18:36:28,675 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-28 20:37:12] 2026-05-28 18:36:28,675 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-28 20:37:12] 2026-05-28 18:36:28,675 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-28 20:37:12] 2026-05-28 18:36:28,675 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-28 20:37:12] 2026-05-28 18:36:28,675 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-28 20:37:12] 2026-05-28 18:36:28,676 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-28 20:37:12] 2026-05-28 18:36:28,676 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-28 20:37:12] 2026-05-28 18:36:28,676 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-28 20:37:12] 2026-05-28 18:36:28,676 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-28 20:37:12] 2026-05-28 18:36:28,676 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-28 20:37:12] 2026-05-28 18:36:28,676 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-28 20:37:12] 2026-05-28 18:36:28,676 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-28 20:37:12] 2026-05-28 18:36:28,676 | INFO     | job 7157054080 has completed (purged errors)
[2026-05-28 20:37:12] 2026-05-28 18:36:28,676 | INFO     | overall cleanup function is called
[2026-05-28 20:37:12] 2026-05-28 18:36:29,686 | INFO     | --- collectZombieJob: --- 10, [3262130]
[2026-05-28 20:37:12] 2026-05-28 18:36:29,686 | INFO     | zombie collector waiting for pid 3262130
[2026-05-28 20:37:12] 2026-05-28 18:36:29,686 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-28 20:37:12] 2026-05-28 18:36:29,686 | INFO     | collected zombie processes
[2026-05-28 20:37:12] 2026-05-28 18:36:29,686 | INFO     | will attempt to kill all subprocesses of pid=3262130
[2026-05-28 20:37:12] 2026-05-28 18:36:30,326 | INFO     | process IDs to be killed: [3262130] (in reverse order)
[2026-05-28 20:37:12] 2026-05-28 18:36:30,617 | WARNING  | found no corresponding commands to process id(s)
[2026-05-28 20:37:12] 2026-05-28 18:36:30,617 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-28 20:37:12] 2026-05-28 18:36:30,646 | INFO     | did not find any defunct processes belonging to 3262130
[2026-05-28 20:37:12] 2026-05-28 18:36:30,670 | INFO     | did not find any defunct processes belonging to 3262130
[2026-05-28 20:37:12] 2026-05-28 18:36:30,671 | INFO     | Ready for new job
[2026-05-28 20:37:12] 2026-05-28 18:36:30,673 | INFO     | ***************************************
[2026-05-28 20:37:12] 2026-05-28 18:36:30,673 | INFO     | ***  PanDA Pilot version 3.13.1.30  ***
[2026-05-28 20:37:12] 2026-05-28 18:36:30,673 | INFO     | ***************************************
[2026-05-28 20:37:12] 2026-05-28 18:36:30,673 | INFO     | 
[2026-05-28 20:37:12] 2026-05-28 18:36:30,680 | INFO     | architecture information:
[2026-05-28 20:37:12] 2026-05-28 18:36:30,681 | INFO     | executing command: cat /etc/os-release
[2026-05-28 20:37:12] 2026-05-28 18:36:30,706 | INFO     | cat /etc/os-release:
[2026-05-28 20:37:12] NAME="CentOS Linux"
[2026-05-28 20:37:12] VERSION="7 (Core)"
[2026-05-28 20:37:12] ID="centos"
[2026-05-28 20:37:12] ID_LIKE="rhel fedora"
[2026-05-28 20:37:12] VERSION_ID="7"
[2026-05-28 20:37:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-28 20:37:12] ANSI_COLOR="0;31"
[2026-05-28 20:37:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-28 20:37:12] HOME_URL="https://www.centos.org/"
[2026-05-28 20:37:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-28 20:37:12] 
[2026-05-28 20:37:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-28 20:37:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-28 20:37:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-28 20:37:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-28 20:37:12] 
[2026-05-28 20:37:12] 2026-05-28 18:36:30,707 | INFO     | ***************************************
[2026-05-28 20:37:12] 2026-05-28 18:36:31,210 | INFO     | executing command: df -mP /var/lib/boinc/var/slot100/slots/3
[2026-05-28 20:37:12] 2026-05-28 18:36:31,235 | INFO     | sufficient remaining disk space (324725112832 B)
[2026-05-28 20:37:12] 2026-05-28 18:36:31,236 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-28 20:37:12] 2026-05-28 18:36:31,236 | INFO     | current server update state: UPDATING_FINAL
[2026-05-28 20:37:12] 2026-05-28 18:36:31,236 | INFO     | update_server=False
[2026-05-28 20:37:12] 2026-05-28 18:36:31,236 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-28 20:37:12] 2026-05-28 18:36:31,458 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-28 20:37:12] 2026-05-28 18:36:31,773 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-28 20:37:12] 2026-05-28 18:36:31,773 | INFO     | aborting loop
[2026-05-28 20:37:12] 2026-05-28 18:36:31,865 | INFO     | all data control threads have been joined
[2026-05-28 20:37:12] 2026-05-28 18:36:32,242 | INFO     | [job] retrieve thread has finished
[2026-05-28 20:37:12] 2026-05-28 18:36:32,277 | INFO     | all payload control threads have been joined
[2026-05-28 20:37:12] 2026-05-28 18:36:32,387 | INFO     | all job control threads have been joined
[2026-05-28 20:37:12] 2026-05-28 18:36:32,447 | INFO     | [payload] validate_post thread has finished
[2026-05-28 20:37:12] 2026-05-28 18:36:32,521 | INFO     | [job] validate thread has finished
[2026-05-28 20:37:12] 2026-05-28 18:36:32,539 | INFO     | [payload] failed_post thread has finished
[2026-05-28 20:37:12] 2026-05-28 18:36:32,646 | INFO     | [job] create_data_payload thread has finished
[2026-05-28 20:37:12] 2026-05-28 18:36:32,779 | INFO     | [job] job monitor thread has finished
[2026-05-28 20:37:12] 2026-05-28 18:36:32,871 | INFO     | [data] control thread has finished
[2026-05-28 20:37:12] 2026-05-28 18:36:32,890 | INFO     | [payload] validate_pre thread has finished
[2026-05-28 20:37:12] 2026-05-28 18:36:33,078 | INFO     | [data] copytool_in thread has finished
[2026-05-28 20:37:12] 2026-05-28 18:36:33,284 | INFO     | [payload] control thread has finished
[2026-05-28 20:37:12] 2026-05-28 18:36:33,393 | INFO     | [job] control thread has finished
[2026-05-28 20:37:12] 2026-05-28 18:36:33,455 | INFO     | [payload] execute_payloads thread has finished
[2026-05-28 20:37:12] 2026-05-28 18:36:33,463 | INFO     | [data] copytool_out thread has finished
[2026-05-28 20:37:12] 2026-05-28 18:36:33,653 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-28 20:37:12] 2026-05-28 18:36:34,510 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-28 20:37:12] 2026-05-28 18:36:34,658 | INFO     | [job] queue monitor thread has finished
[2026-05-28 20:37:12] 2026-05-28 18:36:38,518 | INFO     | [data] queue_monitor thread has finished
[2026-05-28 20:37:12] 2026-05-28 18:36:41,311 | INFO     | job.realtimelogging is not enabled
[2026-05-28 20:37:12] 2026-05-28 18:36:42,317 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-28 20:37:12] 2026-05-28 18:37:02,281 | INFO     | PID=3256302 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.22-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-28 20:37:12] 2026-05-28 18:37:02,281 | INFO     | .. there are 19 such processes running
[2026-05-28 20:37:12] 2026-05-28 18:37:02,282 | INFO     | found 0 job(s) in 20 queues
[2026-05-28 20:37:12] 2026-05-28 18:37:02,282 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-28 20:37:12] 2026-05-28 18:37:02,282 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-28 20:37:12] 2026-05-28 18:37:05,774 | INFO     | [monitor] cgroup control has ended
[2026-05-28 20:37:12] 2026-05-28 18:37:06,597 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23274765358912)>', '<ExcThread(monitor, started 23274523461376)>']
[2026-05-28 20:37:12] 2026-05-28 18:37:07,306 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-28 20:37:12] 2026-05-28 18:37:07,307 | INFO     | [monitor] control thread has ended
[2026-05-28 20:37:12] 2026-05-28 18:37:11,622 | INFO     | all workflow threads have been joined
[2026-05-28 20:37:12] 2026-05-28 18:37:11,623 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-28 20:37:12] 2026-05-28 18:37:11,623 | INFO     | traces error code: 0
[2026-05-28 20:37:12] 2026-05-28 18:37:11,623 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-28 20:37:12] 2026-05-28 18:37:11,839 [wrapper] ==== pilot stdout END ====
[2026-05-28 20:37:12] 2026-05-28 18:37:11,843 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-28 20:37:12] 2026-05-28 18:37:11,846 [wrapper] pilotpid: 3256302
[2026-05-28 20:37:12] 2026-05-28 18:37:11,849 [wrapper] Pilot exit status: 0
[2026-05-28 20:37:12] 2026-05-28 18:37:11,864 [wrapper] pandaids: 7157054080
[2026-05-28 20:37:12] 2026-05-28 18:37:12,042 [wrapper] cleanup supervisor_pilot 3620566 3256303
[2026-05-28 20:37:12] 2026-05-28 18:37:12,045 [wrapper] Test setup, not cleaning
[2026-05-28 20:37:12] 2026-05-28 18:37:12,048 [wrapper] apfmon messages muted
[2026-05-28 20:37:12] 2026-05-28 18:37:12,051 [wrapper] ==== wrapper stdout END ====
[2026-05-28 20:37:12] 2026-05-28 18:37:12,054 [wrapper] ==== wrapper stderr END ====
[2026-05-28 20:37:12]  *** Error codes and diagnostics ***
[2026-05-28 20:37:12]     "exeErrorCode": 0,
[2026-05-28 20:37:12]     "pilotErrorCode": 0,
[2026-05-28 20:37:12]  *** Listing of results directory ***
[2026-05-28 20:37:12] total 462420
[2026-05-28 20:37:12] -rw-r--r--. 1 boinc boinc    709501 May 28 15:25 pilot3.tar.gz
[2026-05-28 20:37:12] -rw-r--r--. 1 boinc boinc      5631 May 28 15:42 queuedata.json
[2026-05-28 20:37:12] -rwx------. 1 boinc boinc     36281 May 28 15:44 runpilot2-wrapper.sh
[2026-05-28 20:37:12] -rw-r--r--. 1 boinc boinc       100 May 28 18:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-28 20:37:12] -rwxr-xr-x. 1 boinc boinc      7986 May 28 18:19 run_atlas
[2026-05-28 20:37:12] -rw-r--r--. 1 boinc boinc       105 May 28 18:19 job.xml
[2026-05-28 20:37:12] -rw-r--r--. 1 boinc boinc      6543 May 28 18:19 init_data.xml
[2026-05-28 20:37:12] -rw-r--r--. 2 boinc boinc 279791330 May 28 18:19 EVNT.49539717._000746.pool.root.1
[2026-05-28 20:37:12] -rw-r--r--. 2 boinc boinc     15667 May 28 18:19 start_atlas.sh
[2026-05-28 20:37:12] drwxrwx--x. 2 boinc boinc      4096 May 28 18:19 shared
[2026-05-28 20:37:12] -rw-r--r--. 2 boinc boinc    722757 May 28 18:19 input.tar.gz
[2026-05-28 20:37:12] -rw-r--r--. 1 boinc boinc         0 May 28 18:19 boinc_lockfile
[2026-05-28 20:37:12] -rw-r--r--. 1 boinc boinc      2604 May 28 18:19 pandaJob.out
[2026-05-28 20:37:12] -rw-------. 1 boinc boinc    996121 May 28 18:19 agis_schedconf.cvmfs.json
[2026-05-28 20:37:12] -rw-------. 1 boinc boinc         0 May 28 18:19 agis_ddmendpoints.agis.ALL.json
[2026-05-28 20:37:12] -rw-------. 1 boinc boinc   1251485 May 28 18:19 cric_ddmendpoints.json
[2026-05-28 20:37:12] -rw-------. 1 boinc boinc       444 May 28 18:19 workernode_map.json
[2026-05-28 20:37:12] drwx------. 5 boinc boinc      4096 May 28 18:19 pilot3
[2026-05-28 20:37:12] -rw-------. 1 boinc boinc 187666148 May 28 20:35 HITS.49545130._018732.pool.root.1
[2026-05-28 20:37:12] -rw-r--r--. 1 boinc boinc       488 May 28 20:36 boinc_task_state.xml
[2026-05-28 20:37:12] -rw-------. 1 boinc boinc        95 May 28 20:36 pilot_heartbeat.json
[2026-05-28 20:37:12] -rw-------. 1 boinc boinc      1026 May 28 20:36 memory_monitor_summary.json
[2026-05-28 20:37:12] -rw-------. 1 boinc boinc    291610 May 28 20:36 log.49545130._018732.job.log.tgz.1
[2026-05-28 20:37:12] -rw-------. 1 boinc boinc      6418 May 28 20:36 heartbeat_new.json
[2026-05-28 20:37:12] -rw-------. 1 boinc boinc      6309 May 28 20:36 heartbeat.json
[2026-05-28 20:37:12] -rw-r--r--. 1 boinc boinc      8192 May 28 20:37 boinc_mmap_file
[2026-05-28 20:37:12] -rw-r--r--. 1 boinc boinc        27 May 28 20:37 wrapper_checkpoint.txt
[2026-05-28 20:37:12] -rw-------. 1 boinc boinc      4906 May 28 20:37 pilotlog.txt
[2026-05-28 20:37:12] -rw-------. 1 boinc boinc    771487 May 28 20:37 log.49545130._018732.job.log.1
[2026-05-28 20:37:12] -rw-------. 1 boinc boinc       357 May 28 20:37 output.list
[2026-05-28 20:37:12] -rw-r--r--. 1 boinc boinc       410 May 28 20:37 runtime_log
[2026-05-28 20:37:12] -rw-------. 1 boinc boinc   1085440 May 28 20:37 result.tar.gz
[2026-05-28 20:37:12] -rw-r--r--. 1 boinc boinc      8844 May 28 20:37 runtime_log.err
[2026-05-28 20:37:12] -rw-------. 1 boinc boinc       662 May 28 20:37 46d52e685e21.diag
[2026-05-28 20:37:12] -rw-r--r--. 1 boinc boinc     21089 May 28 20:37 stderr.txt
[2026-05-28 20:37:12] HITS file was successfully produced:
[2026-05-28 20:37:12] -rw-------. 1 boinc boinc 187666148 May 28 20:35 shared/HITS.pool.root.1
[2026-05-28 20:37:12]  *** Contents of shared directory: ***
[2026-05-28 20:37:12] total 458296
[2026-05-28 20:37:12] -rw-r--r--. 2 boinc boinc 279791330 May 28 18:19 ATLAS.root_0
[2026-05-28 20:37:12] -rw-r--r--. 2 boinc boinc     15667 May 28 18:19 start_atlas.sh
[2026-05-28 20:37:12] -rw-r--r--. 2 boinc boinc    722757 May 28 18:19 input.tar.gz
[2026-05-28 20:37:12] -rw-------. 1 boinc boinc 187666148 May 28 20:35 HITS.pool.root.1
[2026-05-28 20:37:12] -rw-------. 1 boinc boinc   1085440 May 28 20:37 result.tar.gz
20:37:14 (3251914): run_atlas exited; CPU time 31701.358453
20:37:14 (3251914): called boinc_finish(0)

</stderr_txt>
]]>

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